View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2051_low_1 (Length: 634)
Name: NF2051_low_1
Description: NF2051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2051_low_1 |
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Alignment Details
Target: chr2 (Bit Score: 581; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 581; E-Value: 0
Query Start/End: Original strand, 18 - 621
Target Start/End: Original strand, 9407848 - 9408452
Alignment:
| Q |
18 |
agaaaactataaaacatgaagcttcatagatatgttgggaagatctcatactaacatcaacatctgatgtttttgtttgcttcaggtctggtggagattt |
117 |
Q |
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| T |
9407848 |
agaaaactataaaacatgaagcttcatagatatgttgggaagatctcatactaacatcaacatctgatgtttttgtttgcttcaggtctggtggagattt |
9407947 |
T |
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| Q |
118 |
tgacatatcagctcagcgtgtagctgcttcaaaccctctattgaaggatgcaattgttgatgctctgcgccaaacagagtgaaaactgaaaa-ttgaagt |
216 |
Q |
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| T |
9407948 |
tgacatatcagctcagcgtgtagctgcttcaaaccctctattgaaggatgcaattgttgatgctctgcgccaaacagagtgaaaactgaaaaattgaagt |
9408047 |
T |
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| Q |
217 |
tatatattattaatctatgattaggagaaattgtgttacaagtcagtcttttttatttcatttactttttctcaaataatcaaaactattaatttttgga |
316 |
Q |
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| T |
9408048 |
tatatattattaatctatgattaggagaaattgtgttacaagtcagtcttttttatttcatttactttttctcaaataatcaaaactatcaatttttgga |
9408147 |
T |
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| Q |
317 |
tattaaattatccgataaaattattggagcaattttatactttttgtgcgaattatcgaatactcaatgatacaagtcactttaatgcaactcattatta |
416 |
Q |
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| T |
9408148 |
tattaaattatccgataaaattattggagcaattttatactttttgtgcgaattatcgaacactcaatgatacaagtcactttaatgcaactcattatta |
9408247 |
T |
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| Q |
417 |
tagtatgataattgtagttttgtactttctacgtattatagtattctagttctatacttactacgtatccgaaatttaattttcattagtgcatcagcat |
516 |
Q |
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| T |
9408248 |
tagtatgataattgtagttttgtactttctacgtattatagtattctagttctatacttactacgtatccgaaatttaattttcattagtgcatcagcat |
9408347 |
T |
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| Q |
517 |
tacgtagtgaatgatgtaagtaacttttaatcaagttcattcacatggtcttatgagaagcttcgtgaaagcttccgtctttttattatgctgtgattct |
616 |
Q |
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| T |
9408348 |
tacgtagtgaatgatgtaagtaacttttaatcaagttcattcacattgtcttatgagaagcttcgtgaaagcttccatctttttattatgctgtgattct |
9408447 |
T |
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| Q |
617 |
tgttc |
621 |
Q |
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| T |
9408448 |
tgttc |
9408452 |
T |
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