View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2051_low_2 (Length: 621)

Name: NF2051_low_2
Description: NF2051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2051_low_2
NF2051_low_2
[»] chr4 (8 HSPs)
chr4 (234-604)||(24239611-24239981)
chr4 (15-179)||(24239359-24239522)
chr4 (380-604)||(37049979-37050207)
chr4 (396-575)||(16832070-16832249)
chr4 (453-604)||(19852463-19852617)
chr4 (321-536)||(18522154-18522369)
chr4 (453-604)||(16593756-16593910)
chr4 (399-432)||(7500231-7500264)
[»] chr2 (7 HSPs)
chr2 (321-604)||(14296116-14296399)
chr2 (355-604)||(31092295-31092547)
chr2 (369-596)||(37344606-37344836)
chr2 (387-600)||(18693087-18693299)
chr2 (467-600)||(18811706-18811842)
chr2 (462-577)||(8413813-8413928)
chr2 (487-599)||(13502666-13502781)
[»] chr5 (8 HSPs)
chr5 (321-512)||(37307056-37307247)
chr5 (391-603)||(36868272-36868487)
chr5 (323-600)||(19215365-19215643)
chr5 (353-578)||(35811138-35811360)
chr5 (321-600)||(788137-788412)
chr5 (321-554)||(32278565-32278794)
chr5 (468-600)||(15188049-15188181)
chr5 (461-539)||(36150640-36150718)
[»] chr6 (6 HSPs)
chr6 (380-604)||(25167822-25168049)
chr6 (387-598)||(4263290-4263501)
chr6 (321-578)||(3949342-3949600)
chr6 (467-603)||(10990004-10990143)
chr6 (453-538)||(13535133-13535218)
chr6 (393-568)||(5605579-5605754)
[»] chr3 (8 HSPs)
chr3 (355-578)||(35526450-35526673)
chr3 (355-578)||(29346806-29347029)
chr3 (344-604)||(26796697-26796961)
chr3 (462-599)||(16893061-16893201)
chr3 (467-604)||(51524846-51524986)
chr3 (467-604)||(31067154-31067295)
chr3 (387-548)||(8357387-8357547)
chr3 (387-479)||(31163011-31163102)
[»] chr8 (6 HSPs)
chr8 (399-604)||(29369082-29369290)
chr8 (391-604)||(27786712-27786928)
chr8 (353-604)||(28225599-28225854)
chr8 (479-604)||(36206433-36206561)
chr8 (488-604)||(8831244-8831363)
chr8 (387-489)||(3322107-3322209)
[»] chr1 (13 HSPs)
chr1 (355-604)||(13061851-13062103)
chr1 (353-568)||(14344073-14344286)
chr1 (410-604)||(17114660-17114855)
chr1 (460-599)||(49491874-49492015)
chr1 (449-599)||(50903465-50903618)
chr1 (467-578)||(3374311-3374422)
chr1 (483-604)||(41035042-41035166)
chr1 (500-604)||(19394161-19394268)
chr1 (467-560)||(39332360-39332453)
chr1 (395-533)||(29061145-29061283)
chr1 (387-441)||(41034940-41034994)
chr1 (503-560)||(34566284-34566341)
chr1 (369-445)||(44163665-44163740)
[»] scaffold0531 (1 HSPs)
scaffold0531 (453-604)||(10238-10392)
[»] chr7 (5 HSPs)
chr7 (461-599)||(26449531-26449672)
chr7 (468-578)||(19407845-19407955)
chr7 (369-512)||(34547954-34548097)
chr7 (355-443)||(7543995-7544081)
chr7 (500-560)||(33191304-33191364)


Alignment Details
Target: chr4 (Bit Score: 327; Significance: 0; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 234 - 604
Target Start/End: Original strand, 24239611 - 24239981
Alignment:
Q  234 atcaaagtcctaaaatataaatgacagaagaggcttgaaccaattcagtcacaaagtgtaaaacctatgaacagaaaaatcagatctaggaaagaggtgt 333  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  24239611 atcaaagtcctaaaatataaatgagagaagaggcctgaaccaattcagtcacaaagtgtaaaacctatgaacagaaaaatcagatctagaaaagaggtat 24239710  T
Q  334 caaagaccatcattatactgaaaaactagtcatattatgacaatttttggccaaacaactactacaagactaccatctctatgaaaatttgaacaaaagt 433  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  24239711 caaagaccaccattatactgaaaaactagtcatattatgacaattcttggccaaacaactattacaagactaccatttctatgaaaatttgaacaaaagt 24239810  T
Q  434 attgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggc 533  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  24239811 attgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagatagcttttgaggtacccttttgggcacgggtcctcattccggc 24239910  T
Q  534 tgagttaaagctagtaggcttcactttattcacctacttcttctttctctatgccttagtgctctcagata 604  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24239911 tgagttaaagctagtaggcttcactttattcacctacttcttctttctcgatgccttagtgctctcagata 24239981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 24239359 - 24239522
Alignment:
Q  15 caaaggaatagggtatgttatattttgttcttctcttattctttaggcagattaattgaacttttttgtgcacattattttgcttaatttctcttgttgc 114  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24239359 caaaggaatagggt-tgttatattttgttcttctcttattctttaggcagattaattgaacttttttgtgcacattattttgcttaatttctcttgttgc 24239457  T
Q  115 aaattaatttatcttttagctccaccatagatcatgaaattagttgagttggtcacatatatact 179  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||    
T  24239458 aaattaatttatcttttagctctaccatagatcatgaaattagttgagttagtcacagatatact 24239522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 380 - 604
Target Start/End: Complemental strand, 37050207 - 37049979
Alignment:
Q  380 ttggccaaacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgt 479  Q
    ||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||| |||||||   |||||| ||| |||||| ||||||||| |||    
T  37050207 ttggccaaacaacgactaaaagactactctctctatgaaaatttgaacaaaagtattggtattcccatatattctgttgcaattgaaccaactattttgt 37050108  T
Q  480 atctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctag-taggcttcactttattcac---ctacttctt 575  Q
    ||||  |||  | ||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||  |||||||||||| |||||    | ||||||    
T  37050107 atctctcaaagcggctttggaggtacccttttgggcacgagtcctcattccggctgagttaaaactagaaaggcttcactttgttcacatgtttcttctt 37050008  T
Q  576 ctttctctatgccttagtgctctcagata 604  Q
    |||| ||| |||||||||||| |||||||    
T  37050007 ctttttctctgccttagtgctttcagata 37049979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 396 - 575
Target Start/End: Original strand, 16832070 - 16832249
Alignment:
Q  396 tacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagacagct 495  Q
    ||||| |||| | |||||||||||||||||  |||||||||||||||||  | ||||||  || || ||| || ||||||||||||||||||||||||||    
T  16832070 tacaaaactatcctctctatgaaaatttgagtaaaagtattgatattcctagctattctgatgcaaatgaaccgactattatgtatctgccaagacagct 16832169  T
Q  496 tttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcacctacttctt 575  Q
    || |||| ||||||||| ||||| |||||||||||  ||||||||||| |||||||||||||||| ||||| | ||||||    
T  16832170 ttggaggcacccttttgaacacgtgtcctcattccaactgagttaaagttagtaggcttcactttgttcacatgcttctt 16832249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 453 - 604
Target Start/End: Complemental strand, 19852617 - 19852463
Alignment:
Q  453 cttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggc 552  Q
    |||||| || ||| |||||||||||| | ||||||||||| |||| ||| ||| ||||||| ||||||| |||||||||| ||||||||| |||| ||||    
T  19852617 cttttgcaaatgaaccaactattatgaagctgccaagacaactttggagttactcttttgggcacgggttctcattccgggtgagttaaaactagcaggc 19852518  T
Q  553 ttcactttattcac---ctacttcttctttctctatgccttagtgctctcagata 604  Q
     ||||||| | |||   || |||||||||| ||| ||||||||||||||| ||||    
T  19852517 ctcactttgtgcacgtgcttcttcttctttttctctgccttagtgctctccgata 19852463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 321 - 536
Target Start/End: Original strand, 18522154 - 18522369
Alignment:
Q  321 aggaaagaggtgtcaaagaccatcattatactgaaaaactagtcatattatgacaatttttggccaaacaactactacaagactaccatctctatgaaaa 420  Q
    ||||||||||| |||||||| | || |  ||  ||||||||| || |||||||| ||| ||||||||||||   |||  ||||||   ||||||||||||    
T  18522154 aggaaagaggtttcaaagacaaccaatggacataaaaactagacaaattatgaccattcttggccaaacaaaagctaatagactatactctctatgaaaa 18522253  T
Q  421 tttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacggg 520  Q
    |||||||||||||||| ||||||||   ||||||  || || ||| ||||||||| | ||||||||||| |  |||| |||| | |||||||  |||||     
T  18522254 tttgaacaaaagtattcatattcccgaatattctgctgcaactgaaccaactattctatatctgccaagtcgactttggaggcatccttttgagcacgga 18522353  T
Q  521 tcctcattccggctga 536  Q
    ||||||||||||||||    
T  18522354 tcctcattccggctga 18522369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 453 - 604
Target Start/End: Original strand, 16593756 - 16593910
Alignment:
Q  453 cttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggc 552  Q
    |||||| || ||| |||||||||||||| ||||||||||| |||| | | ||| ||||||| ||||||| |||||||||||| ||||||| |||| ||||    
T  16593756 cttttgcaaatgaaccaactattatgtagctgccaagacaactttggcgttactcttttgggcacgggttctcattccggctaagttaaaactagcaggc 16593855  T
Q  553 ttcactttattcac---ctacttcttctttctctatgccttagtgctctcagata 604  Q
     ||||||| | |||   || || ||||||| ||| ||||||||||||||| ||||    
T  16593856 ctcactttgtgcacgtgcttctacttctttttctctgccttagtgctctccgata 16593910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 432
Target Start/End: Complemental strand, 7500264 - 7500231
Alignment:
Q  399 aagactaccatctctatgaaaatttgaacaaaag 432  Q
    ||||||||| ||||||||||||||||||||||||    
T  7500264 aagactaccctctctatgaaaatttgaacaaaag 7500231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 130; Significance: 5e-67; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 321 - 604
Target Start/End: Original strand, 14296116 - 14296399
Alignment:
Q  321 aggaaagaggtgtcaaagaccatcattatactgaaaaactagtcatattatgacaatttttggccaaacaactactacaagactaccatctctatgaaaa 420  Q
    |||||||||||||||||||||| ||||  |  |||||||||| || || ||||| ||| ||| |||| ||||| |||||||||||||  ||||| |||||    
T  14296116 aggaaagaggtgtcaaagaccaccattgcagggaaaaactagacaaataatgaccattcttg-ccaatcaactgctacaagactacc--ctctacgaaaa 14296212  T
Q  421 tttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacggg 520  Q
    |||||||||||||||| ||||||||  ||||||| ||| |||||| ||||||||||||||||||||||| || |||| |||||||||||||||||||| |    
T  14296213 tttgaacaaaagtatttatattcccacttattctattgcaattgaaccaactattatgtatctgccaaggcatctttggaggtacccttttggacacgag 14296312  T
Q  521 tcctcattccggctgagttaaagctagtaggcttcactttattca---cctacttcttctttctctatgccttagtgctctcagata 604  Q
    | |||||||||||||||||||||||||||||||||| ||| ||||    || |||||||||||||| | ||||||| ||||||||||    
T  14296313 tgctcattccggctgagttaaagctagtaggcttcattttgttcatctgcttcttcttctttctctctaccttagtactctcagata 14296399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 355 - 604
Target Start/End: Complemental strand, 31092547 - 31092295
Alignment:
Q  355 aaaactagtcatattatgacaatttttggccaaacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattct 454  Q
    ||||||||||| ||||| || || |||  |||||||||  ||| ||||||||| |||||||||||||||||||||||| |||||  ||||| | ||||||    
T  31092547 aaaactagtcaaattataaccatatttaaccaaacaacagctaaaagactaccctctctatgaaaatttgaacaaaagcattgacgttcccggatattct 31092448  T
Q  455 tttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggctt 554  Q
      || || ||  ||||||||| |||||||| ||||||  |||| ||||||||||||||| |||| ||||||||||||||||||||||| |||| |||| |    
T  31092447 aatgcaaatggaccaactattctgtatctggcaagacgactttggaggtacccttttgggcacgagtcctcattccggctgagttaaatctagaaggcat 31092348  T
Q  555 cactttattcac---ctacttcttctttctctatgccttagtgctctcagata 604  Q
    ||||||||||||    | |||||||||||||| || |||||||||||||||||    
T  31092347 cactttattcacgtgattcttcttctttctctctgtcttagtgctctcagata 31092295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 369 - 596
Target Start/End: Complemental strand, 37344836 - 37344606
Alignment:
Q  369 tatgacaatttttggccaaacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagcc 468  Q
    |||||| ||| ||||||||||||| |||| ||||||||  ||| || |||||||||||||||| ||||| ||||||| | |||| |  || || |||  |    
T  37344836 tatgaccattcttggccaaacaacgactagaagactactctctataagaaaatttgaacaaaaatattggtattcccagatattatgctgcaaatgaatc 37344737  T
Q  469 aactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcacc- 567  Q
    ||||||||||||| || |||| | ||||| ||| ||||||||||| ||||  |||||||||||||||||||||| |||| | | |||||||| ||||||     
T  37344736 aactattatgtatatgtcaaggcggctttggagatacccttttgggcacgaatcctcattccggctgagttaaaactagaatgattcactttgttcacct 37344637  T
Q  568 --tacttcttctttctctatgccttagtgct 596  Q
      | |||||||||||||| ||||||||||||    
T  37344636 gtttcttcttctttctctctgccttagtgct 37344606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 387 - 600
Target Start/End: Complemental strand, 18693299 - 18693087
Alignment:
Q  387 aacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgcc 486  Q
    ||||||| |||||| |||||| |||||||||||  ||  ||||||| ||| ||||||  || ||||||  || |||||| ||||||||| |||||||| |    
T  18693299 aacaactgctacaatactaccctctctatgaaagattctacaaaagcattaatattca-tgctattctaatgcaattgaaccaactattttgtatctgtc 18693201  T
Q  487 aagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcacctacttcttctttctctatg 586  Q
    |||||| |||| |||| |||||||| | ||| |||||||||||||||| |||||||||||| || ||||||||| ||  |   |||||||||| ||| ||    
T  18693200 aagacaactttggaggaacccttttaggcacaggtcctcattccggcttagttaaagctagcagacttcactttgtttgcacgcttcttctttttctctg 18693101  T
Q  587 ccttagtgctctca 600  Q
    ||||||||||||||    
T  18693100 ccttagtgctctca 18693087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 467 - 600
Target Start/End: Original strand, 18811706 - 18811842
Alignment:
Q  467 ccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcac 566  Q
    ||||||||| |||||||| ||||  |||||| ||||  ||||||||| ||||||||||||||||||||||||||||||||  | |||||||||||| |||    
T  18811706 ccaactattctgtatctgtcaaggtagctttggaggagcccttttgggcacgggtcctcattccggctgagttaaagctataaagcttcactttatgcac 18811805  T
Q  567 ---ctacttcttctttctctatgccttagtgctctca 600  Q
       || |||||||||||||| ||||||| ||||||||    
T  18811806 ctgcttcttcttctttctctctgccttattgctctca 18811842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 462 - 577
Target Start/End: Original strand, 8413813 - 8413928
Alignment:
Q  462 ttgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcacttta 561  Q
    |||| |||||||||  |||| || || ||||||||| ||||||||||||||  |||||||||||||||||| |||||| ||||||||||||||||||||     
T  8413813 ttgaaccaactattcagtatatggcaggacagctttggaggtacccttttgagcacgggtcctcattccggttgagttgaagctagtaggcttcactttg 8413912  T
Q  562 ttcacctacttcttct 577  Q
    ||| ||| ||||||||    
T  8413913 ttcgcctgcttcttct 8413928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 487 - 599
Target Start/End: Complemental strand, 13502781 - 13502666
Alignment:
Q  487 aagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcac---ctacttcttctttctct 583  Q
    ||||||||||| ||| ||| ||||||| |||||  |||||||| ||||||||||||||||| || | |  |||| |||||   || |||||||||| |||    
T  13502781 aagacagctttggagttactcttttgggcacggaccctcattctggctgagttaaagctagcagaccttcctttgttcacgagcttcttcttctttttct 13502682  T
Q  584 atgccttagtgctctc 599  Q
     |||||||||||||||    
T  13502681 ctgccttagtgctctc 13502666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 7e-66; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 321 - 512
Target Start/End: Original strand, 37307056 - 37307247
Alignment:
Q  321 aggaaagaggtgtcaaagaccatcattatactgaaaaactagtcatattatgacaatttttggccaaacaactactacaagactaccatctctatgaaaa 420  Q
    ||||||||||||||||||||||||||| |||  |||| |||||||||| ||||  |||||||||||||||||| ||||||||||||  ||||| ||||||    
T  37307056 aggaaagaggtgtcaaagaccatcattgtacataaaacctagtcatataatgagcatttttggccaaacaactgctacaagactacactctctgtgaaaa 37307155  T
Q  421 tttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttg 512  Q
    |||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||    
T  37307156 tttgaacaaaagtattgatatttccagttattcttttgtaattgaaccaactattatgtatctgccaagacagctttaaaggtacccttttg 37307247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 391 - 603
Target Start/End: Complemental strand, 36868487 - 36868272
Alignment:
Q  391 actactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaaga 490  Q
    |||||||||| |||||| ||||||||||||||||||| ||| | ||||| | | | ||||| || |||   |||| |||||||||||||||||| ||||     
T  36868487 actactacaaaactaccctctctatgaaaatttgaaccaaaatgttgatctacgcagttatactgttgcctttgaaccaactattatgtatctgtcaagg 36868388  T
Q  491 cagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcac---ctacttcttctttctctatgc 587  Q
     |||||| |||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||   || ||||||||||||||   |    
T  36868387 tagctttggaggaacccttttggacacgggccctcattccggctgagttaaagctagaaggcttcactttattcacttgcttcttcttctttctctccac 36868288  T
Q  588 cttagtgctctcagat 603  Q
    |||| |||||||||||    
T  36868287 cttattgctctcagat 36868272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 323 - 600
Target Start/End: Complemental strand, 19215643 - 19215365
Alignment:
Q  323 gaaagaggtgtcaaagaccatcattatactgaaaaactagtcatattatgacaatttttggccaaacaactactacaagactaccatctctatgaaaatt 422  Q
    |||| ||||||||||||| | |||||||| ||||| ||||||| |||||| |  || |||||||||||||  ||| |||||| || ||||| ||||||||    
T  19215643 gaaataggtgtcaaagacaaccattatacagaaaa-ctagtcaaattatgtctgttcttggccaaacaacagctaaaagactgccctctctgtgaaaatt 19215545  T
Q  423 tgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtc 522  Q
    |||| | ||||||||| |||||  |  ||||| | | ||||   ||||||||| ||||||||||||| ||| |||  |||||||||||||| | ||||||    
T  19215544 tgaatagaagtattgacattcctagaaattctat-gcaattcgaccaactattctgtatctgccaaggcagttttgaaggtacccttttgggctcgggtc 19215446  T
Q  523 ctcattccggctgagttaaagctagtaggcttcactttattcacctacttcttct---ttctctatgccttagtgctctca 600  Q
    ||||||| |||||||||||||||||  ||| ||||||| ||||||| ||||||||   |||||| || |||||||||||||    
T  19215445 ctcattcgggctgagttaaagctagacggcatcactttgttcacctgcttcttcttcattctctctgtcttagtgctctca 19215365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 353 - 578
Target Start/End: Complemental strand, 35811360 - 35811138
Alignment:
Q  353 gaaaaactagtcatattatgacaatttttggccaaacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttatt 452  Q
    ||||||||||||| |||||||  ||| |||| ||||||||  ||| |||||||||  |||||||||||||||||||||||||||| |||||||   ||||    
T  35811360 gaaaaactagtcaaattatgattattcttggtcaaacaacggctaaaagactacc--ctctatgaaaatttgaacaaaagtattggtattcccaaatatt 35811263  T
Q  453 cttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggc 552  Q
     | ||| |||||| ||||||||| | ||| || |||| | ||||| |   |||| ||||||||||| |||||||||||  |||| |||||| ||| |  |    
T  35811262 atgttgcaattgaaccaactattttatatttgtcaaggc-gctttggtaataccattttggacacgagtcctcattccaactgaattaaagttagaacac 35811164  T
Q  553 ttcactttattcacctacttcttctt 578  Q
    || ||||||||||||| |||||||||    
T  35811163 tttactttattcacctgcttcttctt 35811138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 321 - 600
Target Start/End: Original strand, 788137 - 788412
Alignment:
Q  321 aggaaagaggtgtcaaagaccatcattatactgaaaaactagtcatattatgacaatttttggccaaacaactactacaagactaccatctctatgaaaa 420  Q
    |||||||||||||||||||| | |||| ||   ||||||||| || |||||||| |||  ||||||||| ||  ||| ||||||||| |||||    |||    
T  788137 aggaaagaggtgtcaaagacaaccattgta---aaaaactagacaaattatgaccattcatggccaaaccacagctaaaagactaccctctctg---aaa 788230  T
Q  421 tttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacggg 520  Q
    ||||||||||||| ||| ||||| | | |||||| ||| |||||| |||| |||| | ||| || |||| | ||||| |||| |||||||||| |||| |    
T  788231 tttgaacaaaagt-ttggtattctccgatattctgttgcaattgaaccaattattctatatatgtcaaggcggctttggaggaacccttttgggcacgag 788329  T
Q  521 tcctcattccggctgagttaaagctagtaggcttcactttattca---cctacttcttctttctctatgccttagtgctctca 600  Q
    |||||||  || ||||||||||| ||| |||||||| ||| ||||    || |||||||||||||| ||||||| ||||||||    
T  788330 tcctcatagcgtctgagttaaagttagaaggcttcattttgttcatctgcttcttcttctttctctctgccttaatgctctca 788412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 321 - 554
Target Start/End: Original strand, 32278565 - 32278794
Alignment:
Q  321 aggaaagaggtgtcaaagaccatcattatactgaaaaactagtcatat-tatgacaatttttggccaaacaactactacaagactaccatctctatgaaa 419  Q
    ||||| |||||||||||||| | || |  || ||||||||||||| |  |||||| ||| ||||||||||||| |||| ||||||||  |||||| ||||    
T  32278565 aggaacgaggtgtcaaagacaaccaatgaacagaaaaactagtcaaaagtatgaccattcttggccaaacaacgactaaaagactactctctctaagaaa 32278664  T
Q  420 atttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgg 519  Q
    ||| || |||     ||| ||||| |   |||| | ||| |||||| || |||||| |||||||| |||| | ||||| |||||||||||||||  |||     
T  32278665 attagagcaa-----ttggtattctcatatattttgttgcaattgaacccactattctgtatctgtcaaggcggctttggaggtacccttttgggaacga 32278759  T
Q  520 gtcctcattccggctgagttaaagctagtaggctt 554  Q
     || ||||||||||||||||||| |||| ||||||    
T  32278760 atcttcattccggctgagttaaaactagaaggctt 32278794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 468 - 600
Target Start/End: Complemental strand, 15188181 - 15188049
Alignment:
Q  468 caactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcacc 567  Q
    ||||||||||||| || ||||| ||  |||   |||| || ||||| |||||||||||||||  |||||||||||||||  ||||||||||||  |||      
T  15188181 caactattatgtagctaccaagtcaattttaatggtagccatttgggcacgggtcctcattctagctgagttaaagctatcaggcttcactttgctcata 15188082  T
Q  568 tacttcttctttctctatgccttagtgctctca 600  Q
    | |||||||||| ||| ||| ||||||||||||    
T  15188081 tgcttcttctttttctctgcattagtgctctca 15188049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 461 - 539
Target Start/End: Original strand, 36150640 - 36150718
Alignment:
Q  461 attgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagtt 539  Q
    |||||||||||||||  |||| |||| ||  |||||| |||||| |||||||| |||| ||||||||||||||||||||    
T  36150640 attgagccaactatttggtatatgccgaggtagctttggaggtatccttttgggcacgagtcctcattccggctgagtt 36150718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 2e-50; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 380 - 604
Target Start/End: Complemental strand, 25168049 - 25167822
Alignment:
Q  380 ttggccaaacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgt 479  Q
    ||||||||||||| |||| ||||||||  | ||||||||||||||||||||||||||| |||||||   |||||| ||| |||||| ||||||||| |||    
T  25168049 ttggccaaacaacgactaaaagactactctttctatgaaaatttgaacaaaagtattggtattcccatatattctgttgcaattgaaccaactattctgt 25167950  T
Q  480 atctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcac---ctacttcttc 576  Q
    ||||| |||| | ||||| ||||||||||||||| || | |||||| |||||||||||||||| |||| |||||||||||| |||||    | |||||||    
T  25167949 atctgtcaaggcggctttggaggtacccttttgggcatgagtcctctttccggctgagttaaaactagaaggcttcactttgttcacatgtttcttcttc 25167850  T
Q  577 tttctctatgccttagtgctctcagata 604  Q
    ||||||| |||||||||||| |||||||    
T  25167849 tttctctctgccttagtgctttcagata 25167822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 387 - 598
Target Start/End: Original strand, 4263290 - 4263501
Alignment:
Q  387 aacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgcc 486  Q
    |||||||||||||| |||||| |||||   |||  ||| ||||||| ||| ||||||| ||  |||||  || |||||| |||||||||  |||||||||    
T  4263290 aacaactactacaatactaccctctctgataaagattgtacaaaagcattaatattccttgcaattctaatgcaattgaaccaactattccgtatctgcc 4263389  T
Q  487 aagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcacctacttcttctttctctatg 586  Q
    ||||||  ||| |||| |||||||||  |||||||||||||||||||||||||||| |||| |||||||| ||| || || | |||||||||| ||| ||    
T  4263390 aagacaattttggaggaacccttttgagcacgggtcctcattccggctgagttaaaactagcaggcttcattttgtttacatgcttcttctttttctctg 4263489  T
Q  587 ccttagtgctct 598  Q
    ||||||||||||    
T  4263490 ccttagtgctct 4263501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 321 - 578
Target Start/End: Complemental strand, 3949600 - 3949342
Alignment:
Q  321 aggaaagaggtgtcaaagaccatcattatactgaaaaactagtcatat-tatgacaatttttggccaaacaactactacaagactaccatctctatgaaa 419  Q
    ||||| |||||||||||||| |  | || || ||||| ||||||| |  |||||| ||| ||||||||| ||| |||  ||||||||   ||||| ||||    
T  3949600 aggaacgaggtgtcaaagacaactaataaacagaaaagctagtcaaaagtatgaccattcttggccaaataacgactgaaagactactccctctaagaaa 3949501  T
Q  420 atttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgg 519  Q
    |||||||||||||||||| ||||| | | |||||| ||| ||||||  |||||||| || ||||| |||| | ||||| ||||||||||| || |||||     
T  3949500 atttgaacaaaagtattggtattctcagatattctgttgcaattgaatcaactattctgcatctgtcaaggcggctttggaggtacccttctgaacacga 3949401  T
Q  520 gtcctcattccggctgagttaaagctagtaggcttcactttattcacctacttcttctt 578  Q
    |||||||||| |||| ||||||| |||  | ||||||||||||||||||  ||||||||    
T  3949400 gtcctcattctggctcagttaaaactaaaaagcttcactttattcacctgtttcttctt 3949342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 467 - 603
Target Start/End: Complemental strand, 10990143 - 10990004
Alignment:
Q  467 ccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcac 566  Q
    ||||||||| ||||||||  | | ||||||| |||| |||||||||  |||| ||||||||| ||||| |||||||||||| ||| |||||||| ||| |    
T  10990143 ccaactattttgtatctgttagggcagctttggaggaacccttttgtgcacgagtcctcatttcggctaagttaaagctagaaggattcactttgttctc 10990044  T
Q  567 ---ctacttcttctttctctatgccttagtgctctcagat 603  Q
       || |||||||||||||  |||||||||||||||||||    
T  10990043 ttgctgcttcttctttctcgctgccttagtgctctcagat 10990004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 453 - 538
Target Start/End: Complemental strand, 13535218 - 13535133
Alignment:
Q  453 cttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagt 538  Q
    |||||| || ||| |||||||||||||| |||||||||||||||| ||| ||  | ||||| || |||||||||||||||||||||    
T  13535218 cttttgcaaatgaaccaactattatgtagctgccaagacagctttggagttaatcctttgggcaagggtcctcattccggctgagt 13535133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 393 - 568
Target Start/End: Original strand, 5605579 - 5605754
Alignment:
Q  393 tactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagaca 492  Q
    |||||||| | |||| ||||||||||||||||||| | | |||||||| |  | | ||| |||||  |||||| ||||||||| ||||||||  ||| ||    
T  5605579 tactacaaaattaccctctctatgaaaatttgaaccagaatattgatagttgcaggtatacttttacaattgaaccaactattttgtatctgttaaggca 5605678  T
Q  493 gcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcacct 568  Q
    |||||  ||  ||  |||||  |||| | |||| ||||||||||||||||| | | ||| ||| ||||||||||||    
T  5605679 gctttgaagaaactattttgagcacgagccctcgttccggctgagttaaagatggaagggttccctttattcacct 5605754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 5e-42; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 355 - 578
Target Start/End: Original strand, 35526450 - 35526673
Alignment:
Q  355 aaaactagtcatattatgacaatttttggccaaacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattct 454  Q
    ||||||||||| |||||||| || ||||||| |||||   ||| |||| | |  |||||||||||||||||||||||||||| | |||||| | ||||||    
T  35526450 aaaactagtcaaattatgaccatgtttggcccaacaatagctaaaagattgcactctctatgaaaatttgaacaaaagtattaacattcccagatattct 35526549  T
Q  455 tttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggctt 554  Q
     ||| |||||  |||| |||| || ||||||||||||  ||||   ||||||||||||| ||||||||||||||||||| ||||||||||||| |||| |    
T  35526550 attgcaattgcaccaattattttgaatctgccaagacgtctttgttggtacccttttgggcacgggtcctcattccggccgagttaaagctagaaggcat 35526649  T
Q  555 cactttattcacctacttcttctt 578  Q
    |||||| ||||||| |||||||||    
T  35526650 cactttgttcacctgcttcttctt 35526673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 355 - 578
Target Start/End: Complemental strand, 29347029 - 29346806
Alignment:
Q  355 aaaactagtcatattatgacaatttttggccaaacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattct 454  Q
    ||||||||||| | |||||| |||   ||||||||||| |||| |||||| || ||||||||||||||| |||||||||||||| |||| |   ||| ||    
T  29347029 aaaactagtcaaactatgaccattccaggccaaacaacaactaaaagactgccctctctatgaaaattttaacaaaagtattgacattctcatctatact 29346930  T
Q  455 tttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggctt 554  Q
     ||| |||||  |||||||||||||||||| |||| | ||||| ||||||| ||||||  |||||||||||||||||||| |||||||||||  |||| |    
T  29346929 cttgcaattggaccaactattatgtatctgtcaaggcggctttggaggtactcttttgtgcacgggtcctcattccggctaagttaaagctataaggcat 29346830  T
Q  555 cactttattcacctacttcttctt 578  Q
    ||| || ||||||| |||||||||    
T  29346829 cacgttgttcacctgcttcttctt 29346806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 344 - 604
Target Start/End: Original strand, 26796697 - 26796961
Alignment:
Q  344 cattatactgaaaaactagtcatattatgacaatttttggcca-aacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatatt 442  Q
    |||||||  ||||| |||| || |||||||| |||||| | || |||||||  |||||||||||| ||||||||||| || | |||||||  || | |||    
T  26796697 cattatagagaaaagctaggcaaattatgacgattttttgtcataacaactgttacaagactaccctctctatgaaagttggtacaaaagccttaaaatt 26796796  T
Q  443 ccctgttattcttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaa 542  Q
    |   | |||||| ||| || |||| ||||||||||||| ||| |||| || |||| |||| ||| ||||||  | || |||||||| || ||||||||||    
T  26796797 catagctattctattgcaaatgaggcaactattatgtagctgtcaaggcaactttagaggcaccattttgggtatggttcctcatttcgactgagttaaa 26796896  T
Q  543 gctagtaggcttcactttattcac---ctacttcttctttctctatgccttagtgctctcagata 604  Q
    ||| |||| ||||||||| || ||   || |||||||||||||| ||||||||||||||||||||    
T  26796897 gctggtagacttcactttgttaacatgcttcttcttctttctctctgccttagtgctctcagata 26796961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 462 - 599
Target Start/End: Complemental strand, 16893201 - 16893061
Alignment:
Q  462 ttgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcacttta 561  Q
    |||| |||||||||  |||| || |||| ||||||| |||| |||||||||  ||||||||||||||||||||||||| || |||||||||||||||||     
T  16893201 ttgaaccaactattcggtatatggcaaggcagctttggaggcacccttttgagcacgggtcctcattccggctgagttgaacctagtaggcttcactttg 16893102  T
Q  562 ttcacctacttctt---ctttctctatgccttagtgctctc 599  Q
    ||||||| ||||||   |||| | | |||||||||||||||    
T  16893101 ttcacctgcttcttttgctttttatctgccttagtgctctc 16893061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 467 - 604
Target Start/End: Complemental strand, 51524986 - 51524846
Alignment:
Q  467 ccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcac 566  Q
    ||||||||| || ||||| ||||  |||||| ||||  ||||||||| ||||||||||||||||||||||||||||||||  |||| ||||||||| |||    
T  51524986 ccaactattttgcatctgtcaaggtagctttggaggagcccttttgggcacgggtcctcattccggctgagttaaagctataaggcctcactttatgcac 51524887  T
Q  567 ---ctacttcttctttctctatgccttagtgctctcagata 604  Q
       || ||||||||||||||  |||||| ||||||||||||    
T  51524886 ctgcttcttcttctttctctcagccttattgctctcagata 51524846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 467 - 604
Target Start/End: Complemental strand, 31067295 - 31067154
Alignment:
Q  467 ccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcatt-ccggctgagttaaagctagtaggcttcactttattca 565  Q
    ||||||||| |||| ||||||||||||  || ||| ||| ||||| | |||||||||||||| ||| ||||||||||||||| | || ||||||| | ||    
T  31067295 ccaactattttgtagctgccaagacaggattggagttacacttttaggcacgggtcctcattcccgactgagttaaagctagcaagcctcactttgtgca 31067196  T
Q  566 c---ctacttcttctttctctatgccttagtgctctcagata 604  Q
    |   || |||||||||| ||| ||||||||||||||| ||||    
T  31067195 catgcttcttcttctttttctctgccttagtgctctccgata 31067154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 387 - 548
Target Start/End: Original strand, 8357387 - 8357547
Alignment:
Q  387 aacaactactacaagactaccatctctatgaaa-atttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgc 485  Q
    |||| ||||||||| |||||| ||| ||| ||| ||||  ||||||| ||| ||||||| ||||||| |  || |||| | |||||||||  |||||||     
T  8357387 aacagctactacaatactaccctctttatcaaagattt--acaaaagcattaatattccttgttattttaatgcaattaaaccaactatttcgtatctgt 8357484  T
Q  486 caagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagt 548  Q
    ||||| | ||||  ||  || |||||||||||| |||||||||  ||||||||||||||||||    
T  8357485 caagataactttgaagaaactcttttggacacgagtcctcattttggctgagttaaagctagt 8357547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 479
Target Start/End: Original strand, 31163011 - 31163102
Alignment:
Q  387 aacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgt 479  Q
    ||||||| ||||||||||||| ||| ||||||| || | ||||||  ||||||||| |  | |||| ||||| |||||| |||||||||||||    
T  31163011 aacaactgctacaagactaccttctttatgaaagttggtacaaaatgattgatatttctagctatt-ttttgcaattgaaccaactattatgt 31163102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 5e-39; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 399 - 604
Target Start/End: Complemental strand, 29369290 - 29369082
Alignment:
Q  399 aagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagacagctttt 498  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||| | | ||||||  || |||||  ||||||||| ||||||||||||| | | |||     
T  29369290 aagactaccctctctatgaaaatttgaacaaaagcattgacattctcggatattctaatgcaattggaccaactattctgtatctgccaaggcggatttg 29369191  T
Q  499 gaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcac---ctacttcttctttctctatgccttagtgc 595  Q
    || ||| |||||||| ||||||||||||||| |||| |||||||||| | |||| |||||||||||||   || |||||||||| ||| || ||||||||    
T  29369190 gatgtatccttttgggcacgggtcctcattctggctcagttaaagcttgaaggcatcactttattcacgtgcttcttcttctttatctttgtcttagtgc 29369091  T
Q  596 tctcagata 604  Q
    |||||||||    
T  29369090 tctcagata 29369082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 391 - 604
Target Start/End: Original strand, 27786712 - 27786928
Alignment:
Q  391 actactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaaga 490  Q
    |||||||||| |||||| | ||||||||||||||||| |||||  |||| | | | ||||| |  ||    |||| ||||||||| |||||||| ||||     
T  27786712 actactacaaaactaccctttctatgaaaatttgaaccaaagtgatgatctacgcagttataccgtttcctttgaaccaactattttgtatctgtcaagg 27786811  T
Q  491 cagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcacctac---ttcttctttctctatgc 587  Q
     |||||| |||| ||| |||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||| || |   |||||||||||||  ||    
T  27786812 tagctttggaggaaccattttgggcacggctcctcattccggctgagttaaagctagaaggcttcactttattcatctgcttattcttctttctctccgc 27786911  T
Q  588 cttagtgctctcagata 604  Q
    |||| ||||||||||||    
T  27786912 cttattgctctcagata 27786928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 353 - 604
Target Start/End: Original strand, 28225599 - 28225854
Alignment:
Q  353 gaaaaactagtcatattatgacaatttttggcca-aacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttat 451  Q
    ||||| |||| || |||||||| ||| ||||| | ||||| | ||||||||||||| ||||||||||| |||| || ||| ||||||||||||  |  ||    
T  28225599 gaaaagctaggcagattatgaccattcttggcaataacaattgctacaagactaccctctctatgaaagtttgtactaaattattgatattcctagccat 28225698  T
Q  452 tcttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtagg 551  Q
     |||| |  ||||| ||||||||| | ||  |||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||| ||  |      
T  28225699 gctttagcgattgaaccaactattttatagttgccaagatagcttttgaggtatccttttggacacatgtcctcattccggctgagttaaagttaacaaa 28225798  T
Q  552 cttcactttattcacctacttcttctt---tctctatgccttagtgctctcagata 604  Q
    |||||||||  |||| | |||||||||   ||||| | ||||||||||||||||||    
T  28225799 cttcactttgatcacatgcttcttcttttctctctctaccttagtgctctcagata 28225854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 479 - 604
Target Start/End: Original strand, 36206433 - 36206561
Alignment:
Q  479 tatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattca---cctacttctt 575  Q
    |||||| |||| || |||| |||| || ||||| | |||| |||||||||||| || |||||||||||| |||||||||||||||||    || ||||||    
T  36206433 tatctgtcaaggcaactttggaggaactcttttaggcacgagtcctcattccgactaagttaaagctagaaggcttcactttattcatttgcttcttctt 36206532  T
Q  576 ctttctctatgccttagtgctctcagata 604  Q
    |||||||| |||||| |||||||||||||    
T  36206533 ctttctctctgccttggtgctctcagata 36206561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 604
Target Start/End: Original strand, 8831244 - 8831363
Alignment:
Q  488 agacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattca---cctacttcttctttctcta 584  Q
    ||||| |||| ||| ||| ||||||  ||||||||||||||||||||||||||||||||| |||| ||||||| ||||    || |||||||| | |||     
T  8831244 agacaactttggagttacacttttgagcacgggtcctcattccggctgagttaaagctagcaggcctcactttgttcatgtgcttcttcttctctttctc 8831343  T
Q  585 tgccttagtgctctcagata 604  Q
    ||||||||||||||||||||    
T  8831344 tgccttagtgctctcagata 8831363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 387 - 489
Target Start/End: Complemental strand, 3322209 - 3322107
Alignment:
Q  387 aacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgcc 486  Q
    ||||||| ||||||||||||||||||||||||| |||| |||| |  |||||||||    | ||||||||||||||  | ||||||||| |||| |||||    
T  3322209 aacaactgctacaagactaccatctctatgaaagtttgtacaatatgattgatatttgtagctattcttttgtaataaaaccaactattctgtagctgcc 3322110  T
Q  487 aag 489  Q
    |||    
T  3322109 aag 3322107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 5e-39; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 355 - 604
Target Start/End: Original strand, 13061851 - 13062103
Alignment:
Q  355 aaaactagtcatattatgacaatttttggccaaacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattct 454  Q
    ||||||||||| | || ||| ||| | |||||||||||  ||| ||||||||| |||||||||||||||||||||||||||| | ||||||   ||| ||    
T  13061851 aaaactagtcaaactacgaccattctaggccaaacaacagctaaaagactaccctctctatgaaaatttgaacaaaagtattaacattcccatctatact 13061950  T
Q  455 tttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggctt 554  Q
    |||| |||||  |||| |||| ||||| || |||| | ||||| ||||||| |||||   |||||||||||||| |||||||||||||||||  |||| |    
T  13061951 tttgcaattggaccaattattctgtatttgtcaaggcggctttggaggtactcttttcagcacgggtcctcatttcggctgagttaaagctaaaaggcat 13062050  T
Q  555 cactttattcac---ctacttcttctttctctatgccttagtgctctcagata 604  Q
    |||||| |||||   || |||||||||| ||| || |||||||||||||||||    
T  13062051 cactttgttcacctgcttcttcttctttttctctgtcttagtgctctcagata 13062103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 353 - 568
Target Start/End: Complemental strand, 14344286 - 14344073
Alignment:
Q  353 gaaaaactagtcatattatgacaatttttggccaaacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttatt 452  Q
    ||||||||| ||| | || ||| ||| ||||||||||||| |||| ||||| ||  ||||||  |||| |||||||||||||||||||||||| | ||||    
T  14344286 gaaaaactaatcaaaatacgaccattcttggccaaacaacgactaaaagaccactctctctaaaaaaaattgaacaaaagtattgatattcccagatatt 14344187  T
Q  453 cttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggc 552  Q
     | ||| |||||| |||||||| ||||||||| |||| |  |||| |||||||||||||||||||| ||| ||||||||  ||||||||| |||| ||||    
T  14344186 ttattgcaattga-ccaactat-atgtatctgtcaagtcgactttggaggtacccttttggacacgagtcatcattccgattgagttaaaactagaaggc 14344089  T
Q  553 ttcactttattcacct 568  Q
    |||||||| |||||||    
T  14344088 ttcactttgttcacct 14344073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 410 - 604
Target Start/End: Original strand, 17114660 - 17114855
Alignment:
Q  410 ctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtaccctt 509  Q
    ||||||||||||||| |||||| |||||| ||| |  | |||||| | | |||||| ||||||||| | || |||| ||| | ||||| |||||||||||    
T  17114660 ctctatgaaaatttgtacaaaa-tattgaaattgctaggtattctatcgcaattgaaccaactattctatagctgc-aaggccgctttggaggtaccctt 17114757  T
Q  510 ttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcac---ctacttcttctttctctatgccttagtgctctcagata 604  Q
    ||||||| |||||||||||| ||| ||||||||||||| |||||||||||| |||||    | |||||||||||||| || |||||||||||||||||    
T  17114758 ttggacatgggtcctcattctggcagagttaaagctagcaggcttcactttgttcacatgtttcttcttctttctctctgtcttagtgctctcagata 17114855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 460 - 599
Target Start/End: Original strand, 49491874 - 49492015
Alignment:
Q  460 aattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactt 559  Q
    |||||| |||||||||  ||||  |||||| || |||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||    
T  49491874 aattgaaccaactattcggtatacgccaaggcaactttggaggtacccttttgggcacgggtcctcattccggctgagttgaagctagtaggc-tcactt 49491972  T
Q  560 tattcac---ctacttcttctttctctatgccttagtgctctc 599  Q
    | |||||   || ||||| |||||||  |||||||||||||||    
T  49491973 tgttcacatgcttcttctgctttctccctgccttagtgctctc 49492015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 449 - 599
Target Start/End: Original strand, 50903465 - 50903618
Alignment:
Q  449 tattcttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagt 548  Q
    |||||| ||| ||| || ||||||| |  |||| ||||||| | ||||| ||||||||  ||||| |||||||||||||| |||||||||| ||||||||    
T  50903465 tattctcttgcaatggaaccaactaatcggtatatgccaagtcggctttggaggtaccgctttgggcacgggtcctcatttcggctgagttgaagctagt 50903564  T
Q  549 aggcttcactttattcacctacttctt---ctttctctatgccttagtgctctc 599  Q
    |||||||||||| ||||||| ||||||   ||||| || |||||||||||||||    
T  50903565 aggcttcactttgttcacctgcttcttctgctttcactctgccttagtgctctc 50903618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 467 - 578
Target Start/End: Complemental strand, 3374422 - 3374311
Alignment:
Q  467 ccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcac 566  Q
    ||||||||| |||| || ||||| ||||||| ||| ||||||||||| |||  ||||||||||||||||||||||| ||||  ||||||||||| |||||    
T  3374422 ccaactattctgtagcttccaaggcagctttggagctacccttttgggcacatgtcctcattccggctgagttaaatctagccggcttcactttgttcac 3374323  T
Q  567 ctacttcttctt 578  Q
     | |||||||||    
T  3374322 ttgcttcttctt 3374311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 483 - 604
Target Start/End: Original strand, 41035042 - 41035166
Alignment:
Q  483 tgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcac---ctacttcttcttt 579  Q
    |||||||  |||||| ||||  || |||||| ||||||||||||||||||||||||||||||||| ||||||||   |||||||   || ||||||||||    
T  41035042 tgccaaggtagctttggaggagcctttttgggcacgggtcctcattccggctgagttaaagctagaaggcttcaaaatattcacctgcttcttcttcttt 41035141  T
Q  580 ctctatgccttagtgctctcagata 604  Q
     ||| ||||||| ||||||||||||    
T  41035142 ttctctgccttattgctctcagata 41035166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 500 - 604
Target Start/End: Original strand, 19394161 - 19394268
Alignment:
Q  500 aggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcac---ctacttcttctttctctatgccttagtgct 596  Q
    |||||||||||||| |||||||||||||||| ||| ||||||||| || ||||||||||||  ||||   || |||||||||| ||| ||| ||||||||    
T  19394161 aggtacccttttgggcacgggtcctcattccagctaagttaaagcaagaaggcttcactttgctcacatgcttcttcttctttttctctgctttagtgct 19394260  T
Q  597 ctcagata 604  Q
    ||| ||||    
T  19394261 ctccgata 19394268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 467 - 560
Target Start/End: Complemental strand, 39332453 - 39332360
Alignment:
Q  467 ccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcacttt 560  Q
    |||| |||| |||| |||||||| ||  |||  |||||||||||||| |||||||||||||| ||||||||||||||| || ||||||||||||    
T  39332453 ccaattattctgtagctgccaagtcatttttgaaggtacccttttgggcacgggtcctcatttcggctgagttaaagcaagcaggcttcacttt 39332360  T

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Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 395 - 533
Target Start/End: Complemental strand, 29061283 - 29061145
Alignment:
Q  395 ctacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagacagc 494  Q
    ||||||||||||||||||||||||| |||| ||||||  |||| |||| |  ||||  |||||| |||  | ||||||| | |||| ||| |||| || |    
T  29061283 ctacaagactaccatctctatgaaagtttgtacaaaatgattgttatttctcgttaaacttttgcaataaaaccaactactttgtagctgtcaaggcaac 29061184  T
Q  495 ttttgaggtacccttttggacacgggtcctcattccggc 533  Q
    ||| ||||||||||||| | ||||||| |||||| ||||    
T  29061183 tttggaggtacccttttaggcacgggttctcattgcggc 29061145  T

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Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 441
Target Start/End: Original strand, 41034940 - 41034994
Alignment:
Q  387 aacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatat 441  Q
    ||||||| |||||| |||||| |||| |||||||||||||||||||| |||||||    
T  41034940 aacaactgctacaaaactaccctctcgatgaaaatttgaacaaaagtgttgatat 41034994  T

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Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 34566284 - 34566341
Alignment:
Q  503 tacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcacttt 560  Q
    |||||||||  ||||| ||||||||||| |||||||| |||||||||| |||||||||    
T  34566284 tacccttttaaacacgagtcctcattccagctgagttgaagctagtagacttcacttt 34566341  T

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Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 369 - 445
Target Start/End: Original strand, 44163665 - 44163740
Alignment:
Q  369 tatgacaatttttggccaaacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccc 445  Q
    |||||| ||| ||||||||||||| |||| || |||||  |||||| |||||| ||| ||||||||||| |||||||    
T  44163665 tatgaccattcttggccaaacaacgactaaaa-actactctctctaagaaaatatgatcaaaagtattggtattccc 44163740  T

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Target: scaffold0531 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 453 - 604
Target Start/End: Complemental strand, 10392 - 10238
Alignment:
Q  453 cttttgtaattgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggc 552  Q
    |||||| || ||| |||||||||||||| |||||||||||||||| ||| ||| ||||| | |||||||||||||||||||||||||||| |||| ||||    
T  10392 cttttgcaaatgaaccaactattatgtagctgccaagacagctttggagttactcttttaggcacgggtcctcattccggctgagttaaaactagcaggc 10293  T
Q  553 ttcactttattcac---ctacttcttctttctctatgccttagtgctctcagata 604  Q
     ||||||| | |||   || |||||||||| ||| ||||||||||||||| ||||    
T  10292 ctcactttgtgcacgtgcttcttcttctttttctctgccttagtgctctccgata 10238  T

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Target: chr7 (Bit Score: 64; Significance: 1e-27; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 461 - 599
Target Start/End: Original strand, 26449531 - 26449672
Alignment:
Q  461 attgagccaactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcacttt 560  Q
    ||||| |||||||||  |||| || | || ||| ||| |||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||| |    
T  26449531 attgaaccaactatttggtatatgtcgaggcagttttggaggtacccttttggacacgagtcctcattccggctgagctgaagctagtaggcttcactct 26449630  T
Q  561 attcacctacttctt---ctttctctatgccttagtgctctc 599  Q
     ||||||| ||||||   |||||||| |||||||||||||||    
T  26449631 gttcacctgcttcttctgctttctctctgccttagtgctctc 26449672  T

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Target: chr7; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 468 - 578
Target Start/End: Original strand, 19407845 - 19407955
Alignment:
Q  468 caactattatgtatctgccaagacagcttttgaggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcactttattcacc 567  Q
    |||||||  ||||||||| | | | ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||  ||||||| ||||||    
T  19407845 caactatactgtatctgctagggcggctttggaggtacccttttgggcacgggtcctcattccggctgagttaaagctagaaggaatcactttgttcacc 19407944  T
Q  568 tacttcttctt 578  Q
    | |||||||||    
T  19407945 tgcttcttctt 19407955  T

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Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 369 - 512
Target Start/End: Complemental strand, 34548097 - 34547954
Alignment:
Q  369 tatgacaatttttggccaaacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagcc 468  Q
    |||||| ||| |||||| |||||| |||| ||||||||  |||||||||||||||| |||||||||||| ||||| | | |||||| ||| | |||| ||    
T  34548097 tatgaccattcttggcctaacaacgactaaaagactactctctctatgaaaatttgcacaaaagtattggtattctcagatattctgttgcacttgaacc 34547998  T
Q  469 aactattatgtatctgccaagacagctttt-gaggtacccttttg 512  Q
    ||||||| |||||| ||||| | || |||| ||||||||||||||    
T  34547997 aactattctgtatcggccaa-agaggttttggaggtacccttttg 34547954  T

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Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 7543995 - 7544081
Alignment:
Q  355 aaaactagtcatattatgacaatttttggccaaacaactactacaagactaccatctctatgaaaatttgaacaaaagtattgatattc 443  Q
    ||||||||||| | |||||| ||| | |||||||||||  ||| |||||| ||  ||||||||||||||||||||||||||||| ||||    
T  7543995 aaaactagtcaaactatgaccattctaggccaaacaacagctaaaagactgcc--ctctatgaaaatttgaacaaaagtattgacattc 7544081  T

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Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 500 - 560
Target Start/End: Complemental strand, 33191364 - 33191304
Alignment:
Q  500 aggtacccttttggacacgggtcctcattccggctgagttaaagctagtaggcttcacttt 560  Q
    |||||||||| ||| |||||||||||||  | |||||||||||||||| ||||||||||||    
T  33191364 aggtacccttctgggcacgggtcctcatgtcagctgagttaaagctagcaggcttcacttt 33191304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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