View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2051_low_6 (Length: 287)
Name: NF2051_low_6
Description: NF2051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2051_low_6 |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 20 - 257
Target Start/End: Complemental strand, 330284 - 330047
Alignment:
| Q |
20 |
gcaatcaaggtcacactaacttcatgtgttttaaatacttaagatttgaaacaaatactaaacaagcaaacaaaatccaatacttatgattctcatcaaa |
119 |
Q |
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| T |
330284 |
gcaatcaaggccacactaacttcatgtgttttaaatacttaagatttgaaacaaatactaaacaagcaaacaaaatccaatacttatgattctcatcaaa |
330185 |
T |
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| Q |
120 |
agaaatgtgtttatagatgcatacagttacaaatagaacaatttctcctatcaaattgaaattttgcacattccattgttggtaattcttaatattttat |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
330184 |
agaaatgtgtttatagatgcatacagttacaaatagaacaatttctcccatcaaattgaaattttgcacattccattactggtaattcttaatattttat |
330085 |
T |
|
| Q |
220 |
gtaaaatagcaaaatacagagacttgcaatctattggt |
257 |
Q |
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||||||||| |||||||||||||||||||||||||||| |
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| T |
330084 |
gtaaaatagtaaaatacagagacttgcaatctattggt |
330047 |
T |
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