View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20520_high_15 (Length: 324)
Name: NF20520_high_15
Description: NF20520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20520_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 178 - 307
Target Start/End: Original strand, 17314363 - 17314490
Alignment:
| Q |
178 |
agagagatttaaaacaaaatagcacacaaaggtgtataatggaggtatgaagaggaacnnnnnnnnnnnnngtgtcttgagaatagttactcatgtgagt |
277 |
Q |
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| T |
17314363 |
agagagatttaaaacaaaataacacacaaatgagtataatggaggtatgaagaggaac-aaaaggaaaaaggtgtc-taagaatagttactcatgtgagt |
17314460 |
T |
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| Q |
278 |
agtgaatactcatgaatgtgagtactcttt |
307 |
Q |
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||||||||||||||||||| || ||||||| |
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| T |
17314461 |
agtgaatactcatgaatgtaagcactcttt |
17314490 |
T |
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