View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20520_low_2 (Length: 262)
Name: NF20520_low_2
Description: NF20520
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20520_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 38935556 - 38935808
Alignment:
| Q |
1 |
ttattcaatgttatatctctgtgcacaattggtggagagcaatcactatgcaggtaagcgattgcatgagctattccttgcacaattttcacccttgcac |
100 |
Q |
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| T |
38935556 |
ttattcaatgttatatctctgtgcacaattgctggagagcaatcactatgcaggtaagcgattgcatgagctattccttgcacaatttccacccttgcac |
38935655 |
T |
|
| Q |
101 |
tccaacttagctccaattttccttctcctccatacaacacttttcccaagcttcctttctctacatgttcataaaccaggaacatttgtctcctcataga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38935656 |
tccaacttagctccaattttccttctcctccatacaacacttttcccaagcttcctttctctacatgttcataaaccaggaacatttgtctcctcataga |
38935755 |
T |
|
| Q |
201 |
acagaaaccataaagctttattatattccggtgcctcacttctgttagcgttc |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38935756 |
acagaaaccataaagctttattatattccggtgcctcacttctgttagcgttc |
38935808 |
T |
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