View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20521_high_13 (Length: 286)

Name: NF20521_high_13
Description: NF20521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20521_high_13
NF20521_high_13
[»] chr2 (7 HSPs)
chr2 (1-272)||(21531179-21531450)
chr2 (1-108)||(21249448-21249556)
chr2 (1-108)||(15329121-15329228)
chr2 (59-108)||(23759484-23759533)
chr2 (66-109)||(12911359-12911402)
chr2 (62-95)||(27111848-27111881)
chr2 (108-152)||(41500834-41500878)
[»] chr3 (19 HSPs)
chr3 (1-109)||(286150-286258)
chr3 (27-101)||(6578579-6578653)
chr3 (1-102)||(28051939-28052041)
chr3 (1-102)||(979638-979739)
chr3 (1-108)||(21547584-21547692)
chr3 (1-108)||(3551731-3551837)
chr3 (31-108)||(21253293-21253369)
chr3 (1-96)||(6578812-6578907)
chr3 (34-108)||(296231-296305)
chr3 (1-109)||(20626891-20627001)
chr3 (66-108)||(18482623-18482665)
chr3 (54-108)||(28052189-28052243)
chr3 (1-107)||(18063458-18063565)
chr3 (66-109)||(7028320-7028363)
chr3 (31-81)||(7478509-7478557)
chr3 (66-108)||(13514868-13514910)
chr3 (66-108)||(15572256-15572298)
chr3 (66-108)||(17135395-17135437)
chr3 (66-108)||(23953808-23953850)
[»] chr8 (11 HSPs)
chr8 (1-109)||(18622462-18622567)
chr8 (27-109)||(9997551-9997633)
chr8 (1-108)||(33962534-33962639)
chr8 (1-108)||(33977860-33977965)
chr8 (20-108)||(20254128-20254216)
chr8 (37-108)||(25241195-25241267)
chr8 (1-96)||(9997297-9997392)
chr8 (1-109)||(26537088-26537197)
chr8 (1-108)||(27924702-27924811)
chr8 (66-108)||(22476941-22476983)
chr8 (1-102)||(23540663-23540765)
[»] chr7 (25 HSPs)
chr7 (1-108)||(10037981-10038088)
chr7 (1-108)||(21261231-21261338)
chr7 (1-108)||(23082027-23082134)
chr7 (1-108)||(26132207-26132313)
chr7 (1-90)||(14927446-14927535)
chr7 (1-90)||(15350912-15351001)
chr7 (27-108)||(10661928-10662009)
chr7 (20-101)||(24902925-24903006)
chr7 (20-108)||(10280664-10280752)
chr7 (1-101)||(29545398-29545499)
chr7 (20-93)||(7585816-7585889)
chr7 (1-101)||(20924365-20924465)
chr7 (31-101)||(6046106-6046176)
chr7 (66-109)||(15438947-15438990)
chr7 (66-109)||(20992411-20992454)
chr7 (66-108)||(645999-646041)
chr7 (66-108)||(12326679-12326721)
chr7 (1-109)||(15507031-15507140)
chr7 (1-108)||(4459540-4459649)
chr7 (1-81)||(10661663-10661742)
chr7 (57-97)||(15711772-15711812)
chr7 (31-81)||(4793922-4793970)
chr7 (31-81)||(9567677-9567725)
chr7 (66-108)||(11520661-11520703)
chr7 (31-86)||(19295538-19295591)
[»] chr6 (27 HSPs)
chr6 (1-108)||(15930099-15930206)
chr6 (1-108)||(12385109-12385216)
chr6 (31-109)||(17868219-17868297)
chr6 (31-109)||(17878002-17878080)
chr6 (29-107)||(24542666-24542744)
chr6 (1-108)||(17863724-17863832)
chr6 (31-109)||(11961256-11961334)
chr6 (29-102)||(3566107-3566180)
chr6 (27-108)||(26964805-26964885)
chr6 (38-102)||(19598509-19598573)
chr6 (1-108)||(29252929-29253036)
chr6 (20-101)||(24564534-24564615)
chr6 (20-102)||(19658739-19658820)
chr6 (1-67)||(23881990-23882056)
chr6 (1-109)||(13196125-13196234)
chr6 (56-102)||(23880947-23880993)
chr6 (31-108)||(21316890-21316965)
chr6 (66-108)||(21705780-21705822)
chr6 (2-108)||(20653871-20653979)
chr6 (64-108)||(20989040-20989084)
chr6 (66-109)||(11992270-11992313)
chr6 (108-150)||(2393267-2393309)
chr6 (66-108)||(8464917-8464959)
chr6 (66-108)||(17856062-17856104)
chr6 (66-108)||(21722658-21722700)
chr6 (66-108)||(33666656-33666698)
chr6 (34-81)||(16308694-16308739)
[»] chr5 (17 HSPs)
chr5 (1-108)||(13941266-13941373)
chr5 (1-108)||(26328467-26328574)
chr5 (1-102)||(20714000-20714101)
chr5 (1-108)||(26037578-26037686)
chr5 (1-108)||(22081942-22082049)
chr5 (1-108)||(38406162-38406269)
chr5 (1-108)||(23624642-23624749)
chr5 (1-108)||(18221911-18222018)
chr5 (1-102)||(23419813-23419915)
chr5 (1-108)||(23757507-23757615)
chr5 (1-108)||(23822963-23823071)
chr5 (31-86)||(20740302-20740355)
chr5 (66-108)||(22240228-22240270)
chr5 (66-108)||(22251291-22251333)
chr5 (66-108)||(22404011-22404053)
chr5 (66-108)||(24190730-24190772)
chr5 (45-78)||(30604922-30604955)
[»] chr1 (16 HSPs)
chr1 (13-102)||(23477193-23477282)
chr1 (1-109)||(10339409-10339517)
chr1 (1-102)||(1626374-1626475)
chr1 (1-101)||(25349487-25349587)
chr1 (33-108)||(15803465-15803540)
chr1 (27-101)||(12759294-12759368)
chr1 (43-108)||(17838230-17838295)
chr1 (1-109)||(24986784-24986893)
chr1 (27-108)||(47940113-47940194)
chr1 (1-108)||(4246841-4246949)
chr1 (1-108)||(11667153-11667261)
chr1 (20-102)||(41330639-41330721)
chr1 (1-108)||(20200339-20200447)
chr1 (31-108)||(22891093-22891173)
chr1 (1-108)||(20840514-20840622)
chr1 (66-108)||(13166261-13166303)
[»] chr4 (19 HSPs)
chr4 (1-109)||(15623237-15623345)
chr4 (1-108)||(19182933-19183040)
chr4 (27-102)||(10683253-10683328)
chr4 (27-102)||(10896893-10896968)
chr4 (1-108)||(15161753-15161861)
chr4 (27-101)||(10723304-10723378)
chr4 (27-101)||(10937073-10937147)
chr4 (27-108)||(10718480-10718561)
chr4 (27-108)||(10932249-10932330)
chr4 (27-108)||(33744493-33744574)
chr4 (1-108)||(10724998-10725106)
chr4 (1-108)||(10938767-10938875)
chr4 (2-102)||(15699593-15699693)
chr4 (1-86)||(9069745-9069830)
chr4 (55-101)||(41786278-41786324)
chr4 (27-81)||(32862471-32862526)
chr4 (66-108)||(16384757-16384799)
chr4 (60-97)||(16654603-16654640)
chr4 (31-86)||(10197567-10197620)
[»] scaffold0008 (1 HSPs)
scaffold0008 (30-108)||(36571-36649)
[»] scaffold0226 (3 HSPs)
scaffold0226 (1-108)||(17375-17483)
scaffold0226 (1-108)||(26769-26877)
scaffold0226 (1-109)||(6788-6897)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-108)||(38106-38213)
[»] scaffold0213 (1 HSPs)
scaffold0213 (5-108)||(7829-7933)
[»] scaffold1001 (1 HSPs)
scaffold1001 (1-86)||(763-848)
[»] scaffold0185 (1 HSPs)
scaffold0185 (66-108)||(1618-1660)
[»] scaffold0034 (1 HSPs)
scaffold0034 (31-81)||(50234-50282)
[»] scaffold0359 (1 HSPs)
scaffold0359 (66-108)||(2756-2798)
[»] scaffold0129 (1 HSPs)
scaffold0129 (66-108)||(16372-16414)
[»] scaffold0103 (1 HSPs)
scaffold0103 (66-108)||(24928-24970)
[»] scaffold0024 (1 HSPs)
scaffold0024 (66-108)||(159938-159980)


Alignment Details
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 21531179 - 21531450
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21531179 tatccaacatcttacagagatgcctgaaacatgttggaacatagtattcaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 21531278  T
Q  101 acgcaacatccacgtgtcatcatgggattgatcttatggccggtctagaacagataggtttcaacacgatacatccgactcacataagagatcatttact 200  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  21531279 acgcaacatccacgtgtcatcatgggattggccttatggccggtctagaacagataggtttcgacacgatacatccgactcacattagagatcatttact 21531378  T
Q  201 tcaatgtcatctcgggggatcttcaaagaattttcttttaacgatgcatttattatgacttccatgtatttg 272  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  21531379 tcaatgtcatctcgggggatcttcaaagaatcttcttttaacgatgcatttattatgacttccatgtgtttg 21531450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21249556 - 21249448
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataa-tgcaaccaatacaaa 99  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||| |||  ||||||||||    
T  21249556 tatccaacatcttacagaaatgcctgaaacatgttggaacatagtatccaacaacacaatcatggatatttgttttaccaataattgctgccaatacaaa 21249457  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  21249456 tacccaaca 21249448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 15329121 - 15329228
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||||| ||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||| |||| | |||||||||||    
T  15329121 tatccaacatcttacagacatgcctgaatcatgttggaacattggttccaacaacacaaacatgaatatttgttttagcaacaatgtagccaatacaaat 15329220  T
Q  101 acgcaaca 108  Q
    || |||||    
T  15329221 acccaaca 15329228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 23759484 - 23759533
Alignment:
Q  59 aacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||| |||||||||||||||||| |||||| ||||||||||||| |||||    
T  23759484 aacaagaatatttgttttagcaacaatgcagccaatacaaatacccaaca 23759533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 12911359 - 12911402
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaacat 109  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||    
T  12911359 atatttgttttagcaacaatgcagccaatacaaatacccaacat 12911402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 95
Target Start/End: Original strand, 27111848 - 27111881
Alignment:
Q  62 atgaatatttgttttagcaataatgcaaccaata 95  Q
    ||||||||||||||||||||||||| ||||||||    
T  27111848 atgaatatttgttttagcaataatgaaaccaata 27111881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 41500878 - 41500834
Alignment:
Q  108 atccacgtgtcatcatgggattgatcttatggccggtctagaaca 152  Q
    ||||||||||||| ||| |||||| |||||||||||||| |||||    
T  41500878 atccacgtgtcattatgagattgaccttatggccggtctcgaaca 41500834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 286258 - 286150
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||| |||||||||||    
T  286258 tatccaacatcttacagagatgcctgaaacatgttggaacatagtatccaacatcacaaacatgaatatttattttagcaatgatgcagccaatacaaat 286159  T
Q  101 acgcaacat 109  Q
    || ||||||    
T  286158 acccaacat 286150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 6578653 - 6578579
Alignment:
Q  27 aaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaata 101  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||    
T  6578653 aaacatgttggaacatagtatccaacatcacaaacatggatatttgttttagcaataatgcagccaatacaaata 6578579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 28051939 - 28052041
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||||||||| ||||||||||||| || |||||||||||||| |  |||||||||||||| |   ||||||||||||||||||||||||||||||||||    
T  28051939 tatccaacatcttacagagatgcctaaacacatgttggaacattggttccaacaacacaaataaagatatttgttttagcaataatgcaaccaatacaaa 28052038  T
Q  100 tac 102  Q
    |||    
T  28052039 tac 28052041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 979739 - 979638
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||||| || ||| ||| ||||||||||||||||||||||| ||||| |||  ||||||||||||||||||||| | |||||||||||    
T  979739 tatccaacatcttacagaaatacctaaaatatgttggaacatagtatccaacatcacaatcatagatatttgttttagcaataatgtagccaatacaaat 979640  T
Q  101 ac 102  Q
    ||    
T  979639 ac 979638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 21547584 - 21547692
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||||||||| || |||||||| | || |||||||||||||| |  |||||||||||||||| |||||||| |||||||||||||||| ||||||||||    
T  21547584 tatccaacatcttatagagatgcataaacacatgttggaacattggttccaacaacacaaacaagaatatttattttagcaataatgcagccaatacaaa 21547683  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  21547684 tacccaaca 21547692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3551837 - 3551731
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||||| ||| || ||| || |||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||    
T  3551837 tatccaacatcttacagaaatgtctaaaagat-ttggaatatagtatcccacatcacaaacatggatatttgttttagcaataatgcagccaatacaaat 3551739  T
Q  101 acgcaaca 108  Q
    || |||||    
T  3551738 acccaaca 3551731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 21253369 - 21253293
Alignment:
Q  31 atgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| | |||||||||||| |||||    
T  21253369 atgttggaacatcgtatctaacaacacaaacatggatatttgttttagcaataatgc-agcaatacaaatactcaaca 21253293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 6578907 - 6578812
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatac 96  Q
    ||||||||||| |||||| |||||| ||||||||||| |  | |||||||||| ||||||||||| ||||||||||||||| |||| | |||||||    
T  6578907 tatccaacatcttacagaaatgcctaaaacatgttggcaactcgtatccaacatcacaaacatgagtatttgttttagcaacaatgaagccaatac 6578812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Original strand, 296231 - 296305
Alignment:
Q  34 ttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||| |  ||| |||||||||||| | |||||||||||||||| |||||||||||||||||||| |||||    
T  296231 ttggaacattggttcccacaacacaaacaaggatatttgttttagcaacaatgcaaccaatacaaatacccaaca 296305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 20627001 - 20626891
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaaca-acacaaacatgaatatttgttttagcaataatgcaaccaatacaa 98  Q
    ||||||| ||| ||||||||||||| || |||||||||||||| |  ||||||  ||||| ||| | |||||||||||||||||||  || |||||||||    
T  20627001 tatccaatatcttacagagatgcctaaacacatgttggaacattgattccaacttacacatacaaggatatttgttttagcaataacacatccaatacaa 20626902  T
Q  99 atacgcaacat 109  Q
    |||| ||||||    
T  20626901 atacccaacat 20626891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 18482665 - 18482623
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||||||||||||||||| ||||||||||||| |||||    
T  18482665 atatttgttttagcaataatgcagccaatacaaatacccaaca 18482623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 28052189 - 28052243
Alignment:
Q  54 acacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||| | |||||||||||| |||||||||| ||||||||||||| |||||    
T  28052189 acacaaacaaggatatttgttttaacaataatgcagccaatacaaatacccaaca 28052243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 18063565 - 18063458
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacat--gttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaa 98  Q
    ||||||||||| |||| |||||||| || |||  |||| ||||| |  ||||||| |||| ||| | ||||||||||||||||  ||| |||||||||||    
T  18063565 tatccaacatcttacaaagatgcct-aatcatacgttgaaacattggttccaacaccacatacaaggatatttgttttagcaactatgtaaccaatacaa 18063467  T
Q  99 atacgcaac 107  Q
    |||||||||    
T  18063466 atacgcaac 18063458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 7028363 - 7028320
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaacat 109  Q
    |||||||||||||||| |||||| ||||||||||||| ||||||    
T  7028363 atatttgttttagcaacaatgcagccaatacaaatacccaacat 7028320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 7478557 - 7478509
Alignment:
Q  31 atgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaa 81  Q
    |||||||||||| |||||||||| ||||  |||||||||||||||||||||    
T  7478557 atgttggaacatcgtatccaacatcaca--catgaatatttgttttagcaa 7478509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 13514910 - 13514868
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  13514910 atatttgttttagcaacaatgcagccaatacaaatacccaaca 13514868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 15572298 - 15572256
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  15572298 atatttgttttagcaacaatgcagccaatacaaatacccaaca 15572256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 17135437 - 17135395
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  17135437 atatttgttttagcaacaatgcagccaatacaaatacccaaca 17135395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 23953850 - 23953808
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  23953850 atatttgttttagcaacaatgcagccaatacaaatacccaaca 23953808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 6e-37; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 18622462 - 18622567
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||    
T  18622462 tatccaacatcttacagagatgtctgaaacatgttggaacatagtatccaac---acaaacaagaatatttgttttagcaataatgcaaccaatacaaat 18622558  T
Q  101 acgcaacat 109  Q
    || ||||||    
T  18622559 acccaacat 18622567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 27 - 109
Target Start/End: Original strand, 9997551 - 9997633
Alignment:
Q  27 aaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaacat 109  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  9997551 aaacatgttggaacatagtatccaacattacaaacatgaatatttgttttagcaataatgcagccaatacaaatacccaacat 9997633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33962534 - 33962639
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||||||||| ||||||||||||| || |||||||||||||| |  |||||||||||||| |   |||||| |||||||||||||||| ||||||||||    
T  33962534 tatccaacatcttacagagatgcctaaatacatgttggaacattggttccaacaacacaaata---atatttattttagcaataatgcagccaatacaaa 33962630  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  33962631 tactcaaca 33962639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33977860 - 33977965
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||||||||| ||||||||||||| || |||||||||||||| |  |||||||||||||| |   |||||| |||||||||||||||| ||||||||||    
T  33977860 tatccaacatcttacagagatgcctaaatacatgttggaacattggttccaacaacacaaata---atatttattttagcaataatgcagccaatacaaa 33977956  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  33977957 tactcaaca 33977965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 20254216 - 20254128
Alignment:
Q  20 atgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||| ||||||||||||||||||||||||||| ||||| |||| |||||| |||||||||| ||| | ||||| ||||||| |||||    
T  20254216 atgcctaaaacatgttggaacatagtatccaacatcacaatcatggatatttattttagcaatgatgtagccaatgcaaatacccaaca 20254128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 37 - 108
Target Start/End: Original strand, 25241195 - 25241267
Alignment:
Q  37 gaacatagtatccaacaacacaa-acatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||| |||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  25241195 gaacctagtatccaacaacacactaaatgaatatttgttttagcaataatgcaaccaatacaaatactcaaca 25241267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 9997297 - 9997392
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatac 96  Q
    ||||||||||| |||||| |||||| |||||||||| ||  | |||||||||| ||||||||||  ||||||||||||||| |||| | |||||||    
T  9997297 tatccaacatcttacagaaatgcctaaaacatgttgaaaacttgtatccaacatcacaaacatgggtatttgttttagcaacaatgaagccaatac 9997392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 26537088 - 26537197
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||||||||| ||| || |||||| || ||||||| ||| || |  || ||||||||||||| | |||||||||||| |||||||||||| ||||||||    
T  26537088 tatccaacatcttacggatatgcctaaacacatgttagaagattggttctaacaacacaaacaaggatatttgttttaacaataatgcaactaatacaaa 26537187  T
Q  100 tacgcaacat 109  Q
    ||| ||||||    
T  26537188 tacccaacat 26537197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 27924811 - 27924702
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaaca-acacaaacatgaatatttgttttagcaataatgcaaccaatacaa 98  Q
    ||||||||||| |||||| |||||| || |||||||||||||| |  ||||||  |||||| || | |||||||||| |||||||||||| ||| |||||    
T  27924811 tatccaacatcttacagaaatgcctaaacacatgttggaacattggttccaacttacacaatcaaggatatttgtttcagcaataatgcagccactacaa 27924712  T
Q  99 atacgcaaca 108  Q
    |||| |||||    
T  27924711 atactcaaca 27924702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 22476941 - 22476983
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||||||||||||||||| |||||    
T  22476941 atatttgttttagcaacaatgcaaccaatacaaatacccaaca 22476983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 23540765 - 23540663
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaaca-acacaaacatgaatatttgttttagcaataatgcaaccaatacaa 98  Q
    |||||| |||| ||||||||||||| || |||||||||||||| |  ||||||  |||||  || | ||||||||||| ||||||||||| |||||||||    
T  23540765 tatccatcatcttacagagatgcctaaacacatgttggaacattggttccaacttacacat-caaggatatttgttttcgcaataatgcagccaatacaa 23540667  T
Q  99 atac 102  Q
    ||||    
T  23540666 atac 23540663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 10038088 - 10037981
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||||| |||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||||    
T  10038088 tatccaacatcttacagaaatgcctaaaacatgttggaacatagtatccaacaatacaaacatggatatttgttttcgcaataatgcagccaatacaaat 10037989  T
Q  101 acgcaaca 108  Q
    || |||||    
T  10037988 acccaaca 10037981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 21261231 - 21261338
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||| |||||||||||    
T  21261231 tatccaacatcttacagaaatgcctaaaacatgttggaacatagtatccaacatcacaatcatgaatatttattttagcaatgatgcagccaatacaaat 21261330  T
Q  101 acgcaaca 108  Q
    || |||||    
T  21261331 acccaaca 21261338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23082134 - 23082027
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||| |||||||||||    
T  23082134 tatccaacatcttacagaaatgcctaaaacatgttggaacatagtttccaacatcacaatcatggatatttgttttagcaataatgcagccaatacaaat 23082035  T
Q  101 acgcaaca 108  Q
    || |||||    
T  23082034 acccaaca 23082027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26132313 - 26132207
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||  ||| ||||||||    
T  26132313 tatccaacatcttacagagatgcctgaaacatgttggaacatagtatccaatatcacaaacatggatatttgttttagcaataatg-taccgatacaaat 26132215  T
Q  101 acgcaaca 108  Q
    || |||||    
T  26132214 acccaaca 26132207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14927446 - 14927535
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaac 90  Q
    ||||||||||| || ||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  14927446 tatccaacatcttaaagagatgtctgaaacatgttggaacattgtatccaacaacacaaacatggatatttgttttagcaataatgcaac 14927535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 15350912 - 15351001
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaac 90  Q
    ||||||||||| || ||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  15350912 tatccaacatcttaaagagatgtctgaaacatgttggaacattgtatccaacaacacaaacatggatatttgttttagcaataatgcaac 15351001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 10661928 - 10662009
Alignment:
Q  27 aaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  10661928 aaacatgttggaacatagtatccaacatcacaaacatggatatttgttttagcaataatgcagccaatacaaatacccaaca 10662009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 24902925 - 24903006
Alignment:
Q  20 atgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaata 101  Q
    |||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||| ||||||||||||    
T  24902925 atgcctaaaacatgttggaacatagtatccaacatcacaaacatggatatttgttttaccaataatgcagccaatacaaata 24903006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 10280664 - 10280752
Alignment:
Q  20 atgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| |||||| ||||||||| |||||| ||||||||||||| |||||    
T  10280664 atgcctgaaacatgttagaacatagtatccaacaacacagacatggatatttattttagcaacaatgcagccaatacaaatacccaaca 10280752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 29545499 - 29545398
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacat-agtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaa 98  Q
    ||||||||||| ||||||||||||| || |||||||||||||| ||| |||||||||||||||| |||||||| ||||||||| ||| ||||||||||||    
T  29545499 tatccaacatcttacagagatgcctaaacacatgttggaacattagt-tccaacaacacaaacaagaatatttattttagcaacaatacaaccaatacaa 29545401  T
Q  99 ata 101  Q
    |||    
T  29545400 ata 29545398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 93
Target Start/End: Complemental strand, 7585889 - 7585816
Alignment:
Q  20 atgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaa 93  Q
    |||||| ||||||||||||| ||||||||||||| ||||| |||| ||||||||||||||||||||||| ||||    
T  7585889 atgcctaaaacatgttggaaaatagtatccaacatcacaatcatggatatttgttttagcaataatgcagccaa 7585816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20924465 - 20924365
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| ||| |||||||||||| ||||||| |||||   |||  ||||||||||||||||||||||||||| ||| ||||||  ||||||||||    
T  20924465 tatccaacatcttacggagatgcctgaaccatgttgaaacattacatcttacaacacaaacatgaatatttgttttaacaacaatgcagacaatacaaat 20924366  T
Q  101 a 101  Q
    |    
T  20924365 a 20924365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 6046106 - 6046176
Alignment:
Q  31 atgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaata 101  Q
    |||||||||||||  |||||||| || || |||||||||||||||| |||||| |||| ||||||||||||    
T  6046106 atgttggaacatatgatccaacatcataatcatgaatatttgttttcgcaatagtgcagccaatacaaata 6046176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 15438947 - 15438990
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaacat 109  Q
    |||||||||||||||| |||||||||||||||||||| ||||||    
T  15438947 atatttgttttagcaacaatgcaaccaatacaaatacccaacat 15438990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 109
Target Start/End: Original strand, 20992411 - 20992454
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaacat 109  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  20992411 atatttgttttagcaataatgcagccaatacaaatacccaacat 20992454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 645999 - 646041
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||||||||||||||||| |||||    
T  645999 atatttgttttagcaacaatgcaaccaatacaaatacccaaca 646041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 12326679 - 12326721
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||||||||||||||||| ||||||||||||| |||||    
T  12326679 atatttgttttagcaataatgcagccaatacaaatacccaaca 12326721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15507031 - 15507140
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaaca-acacaaacatgaatatttgttttagcaataatgcaaccaatacaa 98  Q
    ||||||||||| || |||||||||| || |||||||||||||| |  ||||||  |||||  || | |||||||||||||||| |||||| |||||||||    
T  15507031 tatccaacatcttatagagatgcctaaacacatgttggaacattggttccaacttacacat-caaggatatttgttttagcaacaatgcagccaatacaa 15507129  T
Q  99 atacgcaacat 109  Q
    |||| ||||||    
T  15507130 atacccaacat 15507140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4459540 - 4459649
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaaca-acacaaacatgaatatttgttttagcaataatgcaaccaatacaa 98  Q
    ||||||||||| ||||||||||||| || | |||||||||||| |  ||||||  ||| ||||| | |||||||||||||||| ||| || |||| ||||    
T  4459540 tatccaacatcttacagagatgcctaaacagatgttggaacattggttccaacttacagaaacaaggatatttgttttagcaacaatacagccaacacaa 4459639  T
Q  99 atacgcaaca 108  Q
    |||| |||||    
T  4459640 atacccaaca 4459649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 10661663 - 10661742
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaa 81  Q
    ||||||||||| |||| | |||||| |||||||||||||  | |||||||||| |||||| |||  |||||||||||||||    
T  10661663 tatccaacatcttacataaatgcctaaaacatgttggaaacttgtatccaacatcacaaa-atgggtatttgttttagcaa 10661742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 15711772 - 15711812
Alignment:
Q  57 caaacatgaatatttgttttagcaataatgcaaccaataca 97  Q
    |||||||||||||||||||||||||||||| | ||||||||    
T  15711772 caaacatgaatatttgttttagcaataatgaagccaataca 15711812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 4793970 - 4793922
Alignment:
Q  31 atgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaa 81  Q
    |||||||||||| |||||||||| ||||  |||||||||||||||||||||    
T  4793970 atgttggaacatcgtatccaacatcaca--catgaatatttgttttagcaa 4793922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 9567677 - 9567725
Alignment:
Q  31 atgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaa 81  Q
    |||||||||||| |||||||||| ||||  |||||||||||||||||||||    
T  9567677 atgttggaacatcgtatccaacatcaca--catgaatatttgttttagcaa 9567725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 11520703 - 11520661
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  11520703 atatttgttttagcaacaatgcagccaatacaaatacccaaca 11520661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 19295538 - 19295591
Alignment:
Q  31 atgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatg 86  Q
    |||||||||||| |||||||||| || |  ||||| ||||||||||||||||||||    
T  19295538 atgttggaacatcgtatccaacatcata--catgagtatttgttttagcaataatg 19295591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 8e-33; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15930206 - 15930099
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||| ||| ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  15930206 tatccaatatcttacagagatgcctgaaacatgtttgaacattgtatcaaacaacacaaacatgaatatttgttttagcaatatagcagccaatacaaat 15930107  T
Q  101 acgcaaca 108  Q
    || |||||    
T  15930106 acccaaca 15930099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 12385216 - 12385109
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| ||||||||||||| |||||||||||||||| || ||||| || |||||||   ||||||||||||||||||||||| |||||||||||    
T  12385216 tatccaacatcttacagagatgcctaaaacatgttggaacattgtctccaataatacaaacaatgatatttgttttagcaataatgcagccaatacaaat 12385117  T
Q  101 acgcaaca 108  Q
    || |||||    
T  12385116 acccaaca 12385109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 17868297 - 17868219
Alignment:
Q  31 atgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaacat 109  Q
    |||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  17868297 atgttggaacattgtatccaacaacataaacatggatatttattttagcaataatgcaaccaatacaaatacccaacat 17868219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 17878080 - 17878002
Alignment:
Q  31 atgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaacat 109  Q
    |||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||| ||||||    
T  17878080 atgttggaacattgtatccaacaacataaacatggatatttattttagcaataatgcaaccaatacaaatacccaacat 17878002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 107
Target Start/End: Original strand, 24542666 - 24542744
Alignment:
Q  29 acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaac 107  Q
    ||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||  |||||||||||| ||||    
T  24542666 acatgttggaacaaagtatccaacatcacaaacatggatatttgttttagcaataatgcagtcaatacaaatactcaac 24542744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17863832 - 17863724
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||| ||||| ||||||||||||| || |||||||||||||| |  |||||||||||||||| | |||||||||||||||| |||||| |||||| |||    
T  17863832 tatccgacatcttacagagatgcctaaacacatgttggaacattggttccaacaacacaaacaaggatatttgttttagcaacaatgcagccaatagaaa 17863733  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  17863732 tacacaaca 17863724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 11961256 - 11961334
Alignment:
Q  31 atgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaacat 109  Q
    |||||||||||| |||||||||| |||||||||  |||||| ||||| |||||||||||||||||||||||| ||||||    
T  11961256 atgttggaacatcgtatccaacatcacaaacatagatatttattttaacaataatgcaaccaatacaaatacccaacat 11961334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 3566180 - 3566107
Alignment:
Q  29 acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatac 102  Q
    |||| ||||||||||||||| |||| |||||||||| |||||||| |||||||||||||| |||||||||||||    
T  3566180 acatattggaacatagtatcgaacatcacaaacatggatatttgtattagcaataatgcagccaatacaaatac 3566107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 26964885 - 26964805
Alignment:
Q  27 aaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||||||||||||||||||||| || | ||||| |||||||||||||||| |||||| ||||||||||||| |||||    
T  26964885 aaacatgttggaacatagtatccaacatca-acacatggatatttgttttagcaacaatgcagccaatacaaatacccaaca 26964805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 102
Target Start/End: Original strand, 19598509 - 19598573
Alignment:
Q  38 aacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatac 102  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||| |||||||    
T  19598509 aacatagtatccaacatcacaaacatggatatttgttttagcaataatgcagccaattcaaatac 19598573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 29253036 - 29252929
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| || ||| ||||||||| ||||||||||||| |  ||||||| |||||||||| |||||||||||||||| ||| ||  ||||| ||||    
T  29253036 tatccaacatcttaaagacatgcctgaaccatgttggaacattggttccaacatcacaaacatggatatttgttttagcaacaatacagtcaatataaat 29252937  T
Q  101 acgcaaca 108  Q
    || |||||    
T  29252936 acccaaca 29252929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 24564534 - 24564615
Alignment:
Q  20 atgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaata 101  Q
    |||||| |||||||||||||||| |||||||||| || || |||| |||||| ||||||||| |||||| ||||||||||||    
T  24564534 atgcctaaaacatgttggaacatggtatccaacatcataatcatggatatttattttagcaaaaatgcagccaatacaaata 24564615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 19658739 - 19658820
Alignment:
Q  20 atgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatac 102  Q
    |||||| |||||||||||||||||||| |||||| || | |||||||| |||||  ||||||||||||| |||||||||||||    
T  19658739 atgcctaaaacatgttggaacatagtaaccaacatca-acacatgaatttttgtcctagcaataatgcagccaatacaaatac 19658820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23882056 - 23881990
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaat 67  Q
    ||||||||||| |||| |||||||| ||| |||| ||||||| ||||||||||||||||||||||||    
T  23882056 tatccaacatcttacaaagatgcctaaaatatgtaggaacattgtatccaacaacacaaacatgaat 23881990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 13196125 - 13196234
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaaca-acacaaacatgaatatttgttttagcaataatgcaaccaatacaa 98  Q
    ||||||||||| || ||||||| || || |||||||||||||| |  ||||||  ||| ||||| | ||||||||||||||||||||||| |||||||||    
T  13196125 tatccaacatcttatagagatgtctaaacacatgttggaacattggttccaacttaca-aaacaaggatatttgttttagcaataatgcagccaatacaa 13196223  T
Q  99 atacgcaacat 109  Q
    |||| ||||||    
T  13196224 atacccaacat 13196234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 23880993 - 23880947
Alignment:
Q  56 acaaacatgaatatttgttttagcaataatgcaaccaatacaaatac 102  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||    
T  23880993 acaaacatggatatttgttttagcaataatgcagccaatacaaatac 23880947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 21316965 - 21316890
Alignment:
Q  31 atgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||||||  ||||||||| || |  || ||||||||||||||||||||||| | ||||||||||||| |||||    
T  21316965 atgttggaacatcatatccaacatcata--caagaatatttgttttagcaataatgaagccaatacaaatacccaaca 21316890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 21705822 - 21705780
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||||||||||||||||| ||||||||||||| |||||    
T  21705822 atatttgttttagcaataatgcatccaatacaaatactcaaca 21705780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 20653871 - 20653979
Alignment:
Q  2 atccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaaca-acacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    |||||||||| || |||||||||| || |||||||||||||| |  | ||||  ||||| | | | |||||||||||||||||||||||  |||||||||    
T  20653871 atccaacatcttatagagatgcctaaacacatgttggaacattgatttcaacttacacacataaggatatttgttttagcaataatgcagacaatacaaa 20653970  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  20653971 tacccaaca 20653979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 108
Target Start/End: Complemental strand, 20989084 - 20989040
Alignment:
Q  64 gaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||    
T  20989084 gaatatttgttttagcaacaatgcatccaatacaaatacccaaca 20989040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 11992313 - 11992270
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaacat 109  Q
    ||||||||||||||||||||||| |||| |||||||| ||||||    
T  11992313 atatttgttttagcaataatgcagccaacacaaatacccaacat 11992270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 150
Target Start/End: Complemental strand, 2393309 - 2393267
Alignment:
Q  108 atccacgtgtcatcatgggattgatcttatggccggtctagaa 150  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||    
T  2393309 atccacgtgtcatcatgggattggtcttctggccggtccagaa 2393267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 8464959 - 8464917
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||| |||||||||||||||| ||||||||||||| |||||    
T  8464959 atatttattttagcaataatgcagccaatacaaatacccaaca 8464917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 17856062 - 17856104
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  17856062 atatttgttttagcaacaatgcatccaatacaaatacccaaca 17856104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 21722700 - 21722658
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||||||||||||||||| | ||||||||||| |||||    
T  21722700 atatttgttttagcaataatgcagctaatacaaatacccaaca 21722658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 33666656 - 33666698
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  33666656 atatttgttttagcaacaatgcagccaatacaaatacccaaca 33666698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 16308739 - 16308694
Alignment:
Q  34 ttggaacatagtatccaacaacacaaacatgaatatttgttttagcaa 81  Q
    ||||||||| |||||||||| ||||  |||||||||||||||||||||    
T  16308739 ttggaacatcgtatccaacatcaca--catgaatatttgttttagcaa 16308694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 8e-33; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 13941373 - 13941266
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||| | |||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||     
T  13941373 tatccaacatcttacaaaaatgcctaaaacatgttggaacatggtatccaacaacacaaacatggatatttgttttagcaataatgcagccaatacaaaa 13941274  T
Q  101 acgcaaca 108  Q
    || |||||    
T  13941273 acccaaca 13941266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26328574 - 26328467
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    |||||||||||  ||| |||| |||| ||||||||||||||| |  |||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  26328574 tatccaacatctcacatagatacctgtaacatgttggaacattggttccaacaacacatacatgaatatttgttttagcaataatgcaaccaatataaat 26328475  T
Q  101 acgcaaca 108  Q
    || |||||    
T  26328474 acccaaca 26328467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20714101 - 20714000
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    |||| |||||| || |||||||||||||||||||||||||||  ||||||||| |  ||||||| ||||||||||||||||||||||| |||||||||||    
T  20714101 tatctaacatcttatagagatgcctgaaacatgttggaacatgatatccaacatcctaaacatggatatttgttttagcaataatgcagccaatacaaat 20714002  T
Q  101 ac 102  Q
    ||    
T  20714001 ac 20714000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 26037578 - 26037686
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||| ||||| ||||||||||||| || |||||||| ||||| |  |||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  26037578 tatccgacatcttacagagatgcctaaacacatgttgaaacattggttccaacaacacaaacaagaatatttgttttagcaataatgcagccaatacaaa 26037677  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  26037678 tacccaaca 26037686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22082049 - 22081942
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| ||||||||||||||||| |||||||||||| |  | |||||||||||||||| |||||||||||| ||| ||| || |||||||||||    
T  22082049 tatccaacatcttacagagatgcctgaaatatgttggaacattgatttcaacaacacaaacatggatatttgttttaacaacaatacagccaatacaaat 22081950  T
Q  101 acgcaaca 108  Q
    || |||||    
T  22081949 acccaaca 22081942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38406162 - 38406269
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| || ||| ||||||||| ||||||||||||| |  |||||||||||||||| ||||||||||||||||||||||  | |||||||||||    
T  38406162 tatccaacatcttatagacatgcctgaatcatgttggaacattggttccaacaacacaaacaagaatatttgttttagcaataataaatccaatacaaat 38406261  T
Q  101 acgcaaca 108  Q
    || |||||    
T  38406262 acccaaca 38406269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 23624642 - 23624749
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||||| |||| |||| |||||||| |||| |  |||||||||| ||||| | ||||||||||||||||||||||| |||||||||||    
T  23624642 tatccaacatcttacagacatgcttgaatcatgttgggacattggttccaacaacagaaacaaggatatttgttttagcaataatgcagccaatacaaat 23624741  T
Q  101 acgcaaca 108  Q
    || |||||    
T  23624742 acccaaca 23624749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 18221911 - 18222018
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||| | || |||||| |||||||||| |  |  ||||||||||||||||||||||||||||||| ||| |||||| |||||||||||    
T  18221911 tatccaacatcttacaaacatacctgaaccatgttggaaaaatggttccaacaacacaaacatgaatatttgttttaacaacaatgcatccaatacaaat 18222010  T
Q  101 acgcaaca 108  Q
    || |||||    
T  18222011 acccaaca 18222018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 23419915 - 23419813
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||||||||| |||||||| |||| || |||||||| ||||| |   ||||||||||||||| |||||||||||||| ||| |||||| ||||||||||    
T  23419915 tatccaacatcttacagagacgcctaaacacatgttgaaacattggtaccaacaacacaaacaagaatatttgttttaacaacaatgcagccaatacaaa 23419816  T
Q  100 tac 102  Q
    |||    
T  23419815 tac 23419813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23757615 - 23757507
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaac-aacacaaacatgaatatttgttttagcaataatgcaaccaatacaa 98  Q
    ||||||||||| || |||||||||| || |||||||||||||| |  |||||| |||||| | | | |||||||||||||||| |||||| ||| |||||    
T  23757615 tatccaacatcatatagagatgcctaaacacatgttggaacattggttccaactaacacata-aaggatatttgttttagcaacaatgcacccagtacaa 23757517  T
Q  99 atacgcaaca 108  Q
    |||| |||||    
T  23757516 atacccaaca 23757507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23823071 - 23822963
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaac-aacacaaacatgaatatttgttttagcaataatgcaaccaatacaa 98  Q
    ||||||||||| || |||||||||| || |||||||||||||| |  |||||| |||||| | | | |||||||||||||||| |||||| ||| |||||    
T  23823071 tatccaacatcatatagagatgcctaaacacatgttggaacattggttccaactaacacata-aaggatatttgttttagcaacaatgcacccagtacaa 23822973  T
Q  99 atacgcaaca 108  Q
    |||| |||||    
T  23822972 atacccaaca 23822963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 20740355 - 20740302
Alignment:
Q  31 atgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatg 86  Q
    |||||||||||| |||||||||| ||||  ||||||||||||||||||||| ||||    
T  20740355 atgttggaacattgtatccaacatcaca--catgaatatttgttttagcaaaaatg 20740302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 22240270 - 22240228
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  22240270 atatttgttttagcaacaatgcagccaatacaaatacccaaca 22240228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 22251333 - 22251291
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  22251333 atatttgttttagcaacaatgcagccaatacaaatacccaaca 22251291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 22404053 - 22404011
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  22404053 atatttgttttagcaacaatgcagccaatacaaatacccaaca 22404011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 24190730 - 24190772
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  24190730 atatttgttttagcaacaatgcagccaatacaaatacccaaca 24190772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 30604955 - 30604922
Alignment:
Q  45 tatccaacaacacaaacatgaatatttgttttag 78  Q
    |||||||||||||||||| |||||||||||||||    
T  30604955 tatccaacaacacaaacaagaatatttgttttag 30604922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 102
Target Start/End: Complemental strand, 23477282 - 23477193
Alignment:
Q  13 tacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatac 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||| |||||||||||||    
T  23477282 tacaaagatgcctgaaacatgttggaacatagtatccaacaacacatatatgaatatttgttttagcaacaatgcagccaatacaaatac 23477193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 10339517 - 10339409
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||||| |||||| ||||||||||||||||||||||||||| | ||| |||| |||||| |||||||||||||||| |||||||||||    
T  10339517 tatccaacatcttacagaaatgcctaaaacatgttggaacatagtatccaacatcgcaatcatggatatttattttagcaataatgcagccaatacaaat 10339418  T
Q  101 acgcaacat 109  Q
    || ||||||    
T  10339417 acccaacat 10339409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1626374 - 1626475
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||||| |||| | ||||||||||||| || ||||||||||||| ||||| | ||||||||||||||||||||||| |||||||||||    
T  1626374 tatccaacatcttacagaaatgcataaaacatgttggaatattgtatccaacaacataaacaaggatatttgttttagcaataatgcagccaatacaaat 1626473  T
Q  101 ac 102  Q
    ||    
T  1626474 ac 1626475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 25349587 - 25349487
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||| | |||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||  ||||| ||||    
T  25349587 tatccaacatcttacataaatgcctaaaacatgttggaacattgtatccaacaacacaaacatggatatttgttttaacaataatgcagtcaatataaat 25349488  T
Q  101 a 101  Q
    |    
T  25349487 a 25349487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 15803540 - 15803465
Alignment:
Q  33 gttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  15803540 gttggaacatcgtatccaacaacacaaacatgaatatttgttttagcaataatgcagccaatgcaaatacccaaca 15803465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 12759294 - 12759368
Alignment:
Q  27 aaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaata 101  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||    
T  12759294 aaacatgttggaacataatatccaacatcacaaacatggatatttgttttagcaataatgcaactaatacaaata 12759368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 17838295 - 17838230
Alignment:
Q  43 agtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  17838295 agtatccaacaacacaaacatgaatatttgttttagcaataatgcagccaatacaaatacccaaca 17838230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 24986784 - 24986893
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||||||||| ||||||||||||| || |||||||||||||| |  ||||||||||||  || | |||||| ||||||||||||||||  |||||||||    
T  24986784 tatccaacatcttacagagatgcctaaacacatgttggaacattggttccaacaacacagtcaaggatatttattttagcaataatgcagtcaatacaaa 24986883  T
Q  100 tacgcaacat 109  Q
    ||| ||||||    
T  24986884 tacccaacat 24986893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 47940194 - 47940113
Alignment:
Q  27 aaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||||||||||||||||||||| |||||| ||| |||||||||||| ||||||  || |||||| |||||| |||||    
T  47940194 aaacatgttggaacatagtatccaacatcacaaatatggatatttgttttaacaataacacagccaatataaatacccaaca 47940113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 4246841 - 4246949
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||||||||| |||||||| | || || |||||||| ||||| |  |||||||||||| ||| | |||||||||||||||| |||||| ||||||||||    
T  4246841 tatccaacatcttacagagacgtctaaacacatgttgaaacattggttccaacaacacatacaaggatatttgttttagcaacaatgcagccaatacaaa 4246940  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  4246941 tacccaaca 4246949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 11667261 - 11667153
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||||||||| |||||||||| || || |||||||||||||| |  |||||||||||||||| | |||||||||| | ||| |||| |  |||||||||    
T  11667261 tatccaacatcttacagagatgtctaaacacatgttggaacattggttccaacaacacaaacaaggatatttgtttaatcaacaatggagtcaatacaaa 11667162  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  11667161 tacccaaca 11667153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 41330721 - 41330639
Alignment:
Q  20 atgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatac 102  Q
    |||||| ||||| |||||||||| ||||| |||| || || |||| |||||||||||||||| ||||||  ||||||||||||    
T  41330721 atgcctaaaacacgttggaacatggtatcgaacatcaaaatcatggatatttgttttagcaacaatgcagtcaatacaaatac 41330639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20200447 - 20200339
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaaca-acacaaacatgaatatttgttttagcaataatgcaaccaatacaa 98  Q
    ||||||||||| ||||||||||||| || |||||||||||||| |  ||||||  | |||| || | |||||||||||||||| |||||| |||||||||    
T  20200447 tatccaacatcttacagagatgcctaaacacatgttggaacattggttccaacttatacaa-caaggatatttgttttagcaacaatgcagccaatacaa 20200349  T
Q  99 atacgcaaca 108  Q
    |||| |||||    
T  20200348 atacccaaca 20200339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 22891173 - 22891093
Alignment:
Q  31 atgttggaacatagtatccaacaac--aca-aacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||||||||||||  ||| |||| | |||||| ||||||||| |||||| ||||||||||||| |||||    
T  22891173 atgttggaacatagtatccaacaacttacacaacaaggatatttattttagcaacaatgcagccaatacaaatacccaaca 22891093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 20840622 - 20840514
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaaca-acacaaacatgaatatttgttttagcaataatgcaaccaatacaa 98  Q
    ||||||||||| ||||||||||||| || | |||||||||||| |  ||||||  |||||  || | |||||||||||||||| |||||| |||||||||    
T  20840622 tatccaacatcttacagagatgcctaaacatatgttggaacattggttccaacttacacat-caaggatatttgttttagcaacaatgcagccaatacaa 20840524  T
Q  99 atacgcaaca 108  Q
    |||| |||||    
T  20840523 atacccaaca 20840514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 13166261 - 13166303
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  13166261 atatttgttttagcaacaatgcagccaatacaaatacccaaca 13166303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15623237 - 15623345
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||||| |||||| |||||||||||| ||||||||||||| ||||||| ||| |||||| |||| |||||||||||||||||||||||    
T  15623237 tatccaacatcttacagaaatgcctaaaacatgttggatcatagtatccaactacacaaagatggatatttattttggcaataatgcaaccaatacaaat 15623336  T
Q  101 acgcaacat 109  Q
    || ||||||    
T  15623337 acccaacat 15623345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 19183040 - 19182933
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||  | | ||||||||||||||||||||| | |||||||||||    
T  19183040 tatccaacatcttacagagatgcctaaaacatgttggaacattgtatccaacaacacaagtaaggatatttgttttagcaataatgtagccaatacaaat 19182941  T
Q  101 acgcaaca 108  Q
    || |||||    
T  19182940 acccaaca 19182933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 10683253 - 10683328
Alignment:
Q  27 aaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatac 102  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||    
T  10683253 aaacatgttggaacatagtatccaacatcacaaacatggatatttgttttagcaataatgcagccaatacaaatac 10683328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 10896893 - 10896968
Alignment:
Q  27 aaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatac 102  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||    
T  10896893 aaacatgttggaacatagtatccaacatcacaaacatggatatttgttttagcaataatgcagccaatacaaatac 10896968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15161861 - 15161753
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||||||||| ||||||||||||| || |||||||||||||| |  |||||||||||||||| | |||||||||||| |||||||||| ||||||||||    
T  15161861 tatccaacatcttacagagatgcctaaacacatgttggaacattggttccaacaacacaaacaaggatatttgttttaacaataatgcagccaatacaaa 15161762  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  15161761 tacccaaca 15161753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 10723304 - 10723378
Alignment:
Q  27 aaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaata 101  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  10723304 aaacatgttggaacatagtatccaacatcacaaacatggatatttgttttagcaataatgtagccaatacaaata 10723378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 10937073 - 10937147
Alignment:
Q  27 aaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaata 101  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | ||||||||||||    
T  10937073 aaacatgttggaacatagtatccaacatcacaaacatggatatttgttttagcaataatgtagccaatacaaata 10937147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 10718480 - 10718561
Alignment:
Q  27 aaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||| ||||||||||||| |||||    
T  10718480 aaacatgttggaacatagtatccaacatcgcaaacatggatatttgctttagcaataatgcagccaatacaaatacccaaca 10718561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 10932249 - 10932330
Alignment:
Q  27 aaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||| ||||||||||||||| ||||||||||||| |||||    
T  10932249 aaacatgttggaacatagtatccaacatcgcaaacatggatatttgctttagcaataatgcagccaatacaaatacccaaca 10932330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 33744493 - 33744574
Alignment:
Q  27 aaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||||||||||| ||||||||| |||||||||  ||||||||||||||||||||||| ||||||||||||| |||||    
T  33744493 aaacatgttggaacataatatccaacatcacaaacatatatatttgttttagcaataatgcagccaatacaaatacccaaca 33744574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 10724998 - 10725106
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||||||||| |||||||||||||  | | |||||||||||| |  |||||||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  10724998 tatccaacatcttacagagatgcctacacatatgttggaacattggttccaacaacacaaacaaggatatttgttttagcaataatgcagccaatacaaa 10725097  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  10725098 tacccaaca 10725106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 10938767 - 10938875
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||||||||| |||||||||||||  | | |||||||||||| |  |||||||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  10938767 tatccaacatcttacagagatgcctacacatatgttggaacattggttccaacaacacaaacaaggatatttgttttagcaataatgcagccaatacaaa 10938866  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  10938867 tacccaaca 10938875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 102
Target Start/End: Complemental strand, 15699693 - 15699593
Alignment:
Q  2 atccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaata 101  Q
    |||||||||| ||  || |||| |||| ||||||||||||| | ||||||||||||||||| | ||||||||||||| || |||||| ||||||||||||    
T  15699693 atccaacatcttatggacatgcttgaaccatgttggaacattgcatccaacaacacaaacaaggatatttgttttagtaacaatgcagccaatacaaata 15699594  T
Q  102 c 102  Q
    |    
T  15699593 c 15699593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9069745 - 9069830
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatg 86  Q
    ||||||||||| |||||| |||||  |||||||||||||  | |||||||||| ||||||||||  ||||||||||||||| ||||    
T  9069745 tatccaacatcttacagaaatgccgaaaacatgttggaaacttgtatccaacatcacaaacatgggtatttgttttagcaacaatg 9069830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 41786278 - 41786324
Alignment:
Q  55 cacaaacatgaatatttgttttagcaataatgcaaccaatacaaata 101  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||||||    
T  41786278 cacatacatggatatttgttttagcaataatgcagccaatacaaata 41786324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 32862471 - 32862526
Alignment:
Q  27 aaacatgttggaacatagtatccaacaac-acaaacatgaatatttgttttagcaa 81  Q
    ||||||||||||||||||||||||||| | ||| ||||| |||||| |||||||||    
T  32862471 aaacatgttggaacatagtatccaacatcaacacacatggatatttattttagcaa 32862526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 16384757 - 16384799
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  16384757 atatttgttttagcaacaatgcagccaatacaaatacccaaca 16384799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 97
Target Start/End: Complemental strand, 16654640 - 16654603
Alignment:
Q  60 acatgaatatttgttttagcaataatgcaaccaataca 97  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  16654640 acatgaatatttgttttagcaataatgaagccaataca 16654603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 10197620 - 10197567
Alignment:
Q  31 atgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatg 86  Q
    ||||||||||||  ||||||||| || |||  ||||||||||||||||||||||||    
T  10197620 atgttggaacatcatatccaacatcataaa--tgaatatttgttttagcaataatg 10197567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 36571 - 36649
Alignment:
Q  30 catgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||| |||||    
T  36571 catgttggaacatattatccaacatcacaaacatggatatttgttttagcaataatgcagccaatacaaatacccaaca 36649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 17483 - 17375
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    |||| |||||| ||||||||| ||| || |||||||||||||| |  |||||||||||||||| | |||||||||||||||||||||||  |||||||||    
T  17483 tatctaacatcttacagagatacctaaacacatgttggaacattggttccaacaacacaaacaaggatatttgttttagcaataatgcagtcaatacaaa 17384  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  17383 tacccaaca 17375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 26877 - 26769
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    |||| |||||| ||||||||| ||| || |||||||||||||| |  |||||||||||||||| | |||||||||||||||||||||||  |||||||||    
T  26877 tatctaacatcttacagagatacctaaacacatgttggaacattggttccaacaacacaaacaaggatatttgttttagcaataatgcagtcaatacaaa 26778  T
Q  100 tacgcaaca 108  Q
    ||| |||||    
T  26777 tacccaaca 26769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 6897 - 6788
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaa 99  Q
    ||||||| ||| |||| ||||| || || |||||||||||||| |  |||||||||||||||| | ||||||| ||||||||||||| | ||||||||||    
T  6897 tatccaaaatcttacaaagatggctaaacacatgttggaacattggttccaacaacacaaacaaggatatttgctttagcaataatgtagccaatacaaa 6798  T
Q  100 tacgcaacat 109  Q
    ||| ||||||    
T  6797 tacccaacat 6788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38106 - 38213
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaat 100  Q
    ||||||||||| |||| | |||| ||| ||||| |||||||| |||||||| | ||||||| |  ||||||||||||||||||||||| |||||||||||    
T  38106 tatccaacatcttacataaatgcttgagacatgatggaacattgtatccaatatcacaaacttatatatttgttttagcaataatgcagccaatacaaat 38205  T
Q  101 acgcaaca 108  Q
    || |||||    
T  38206 acccaaca 38213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 7933 - 7829
Alignment:
Q  5 caacatcgtacagagatgcctgaa-acatgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatacg 103  Q
    ||||||| || |||||||| | || |||||||||||||| |  |||||||||||||| | | ||||||||||||||||||||||| |||||||||||||     
T  7933 caacatcttatagagatgcttaaacacatgttggaacattggttccaacaacacaaataaggatatttgttttagcaataatgcagccaatacaaatacc 7834  T
Q  104 caaca 108  Q
    |||||    
T  7833 caaca 7829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 763 - 848
Alignment:
Q  1 tatccaacatcgtacagagatgcctgaaacatgttggaacat-agtatccaacaacacaaacatgaatatttgttttagcaataatg 86  Q
    ||||||||||| |||||| ||||||||| |||  |||||||| ||| ||||||||||||||||||||||||||||||||||| ||||    
T  763 tatccaacatcttacagacatgcctgaaccatcctggaacattagt-tccaacaacacaaacatgaatatttgttttagcaacaatg 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 1660 - 1618
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    ||||||||||||||||||||||| ||||||||||||| |||||    
T  1660 atatttgttttagcaataatgcagccaatacaaatacccaaca 1618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 50282 - 50234
Alignment:
Q  31 atgttggaacatagtatccaacaacacaaacatgaatatttgttttagcaa 81  Q
    |||||||||||| |||||||||| ||||  |||||||||||||||||||||    
T  50282 atgttggaacatcgtatccaacatcaca--catgaatatttgttttagcaa 50234  T

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Target: scaffold0359 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 2756 - 2798
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  2756 atatttgttttagcaacaatgcagccaatacaaatacccaaca 2798  T

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Target: scaffold0129 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 16372 - 16414
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||||||| ||||||||| |||||    
T  16372 atatttgttttagcaacaatgcaaccattacaaatacccaaca 16414  T

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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 24970 - 24928
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  24970 atatttgttttagcaacaatgcagccaatacaaatacccaaca 24928  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 159938 - 159980
Alignment:
Q  66 atatttgttttagcaataatgcaaccaatacaaatacgcaaca 108  Q
    |||||||||||||||| |||||| ||||||||||||| |||||    
T  159938 atatttgttttagcaacaatgcagccaatacaaatacacaaca 159980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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