View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20521_low_11 (Length: 304)

Name: NF20521_low_11
Description: NF20521
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20521_low_11
NF20521_low_11
[»] chr2 (14 HSPs)
chr2 (16-304)||(21530911-21531199)
chr2 (33-301)||(15328875-15329138)
chr2 (176-304)||(24789497-24789625)
chr2 (222-301)||(21249539-21249618)
chr2 (164-238)||(23759305-23759379)
chr2 (176-236)||(12911185-12911245)
chr2 (249-299)||(24311196-24311246)
chr2 (176-237)||(22611584-22611645)
chr2 (243-294)||(27108203-27108254)
chr2 (243-299)||(24312988-24313044)
chr2 (243-294)||(27111792-27111843)
chr2 (243-293)||(36397839-36397889)
chr2 (257-294)||(29566763-29566800)
chr2 (243-299)||(31588240-31588296)
[»] chr6 (36 HSPs)
chr6 (13-304)||(15930186-15930480)
chr6 (33-304)||(23882036-23882307)
chr6 (33-281)||(29253042-29253291)
chr6 (33-294)||(25805958-25806219)
chr6 (38-304)||(12039048-12039312)
chr6 (118-294)||(8465015-8465191)
chr6 (178-302)||(21722748-21722871)
chr6 (33-304)||(17863812-17864083)
chr6 (33-304)||(20653619-20653890)
chr6 (164-303)||(17235275-17235414)
chr6 (164-299)||(24542335-24542470)
chr6 (228-304)||(19598426-19598502)
chr6 (176-294)||(21705878-21705996)
chr6 (172-294)||(33666480-33666602)
chr6 (108-234)||(20465302-20465428)
chr6 (172-304)||(19172104-19172235)
chr6 (164-299)||(19077824-19077959)
chr6 (186-293)||(19168149-19168256)
chr6 (164-303)||(23879566-23879705)
chr6 (239-304)||(12385196-12385261)
chr6 (203-304)||(13196044-13196145)
chr6 (164-304)||(13869740-13869880)
chr6 (131-229)||(12028556-12028654)
chr6 (246-299)||(20764346-20764399)
chr6 (224-292)||(17868275-17868343)
chr6 (224-292)||(17878058-17878126)
chr6 (176-303)||(9281049-9281176)
chr6 (171-254)||(19100585-19100668)
chr6 (180-303)||(25970374-25970497)
chr6 (180-303)||(25974814-25974937)
chr6 (243-293)||(34639555-34639605)
chr6 (33-82)||(26965134-26965183)
chr6 (226-302)||(11992361-11992437)
chr6 (176-304)||(19894006-19894134)
chr6 (243-299)||(21316936-21316992)
chr6 (244-294)||(11961230-11961280)
[»] chr7 (27 HSPs)
chr7 (33-304)||(14927198-14927466)
chr7 (33-304)||(15350664-15350932)
chr7 (39-304)||(29545479-29545744)
chr7 (108-304)||(20992168-20992364)
chr7 (33-304)||(12326361-12326633)
chr7 (33-234)||(16437325-16437525)
chr7 (146-304)||(20924445-20924603)
chr7 (131-304)||(4459387-4459560)
chr7 (171-304)||(16207219-16207352)
chr7 (33-199)||(10280404-10280570)
chr7 (226-301)||(10038071-10038146)
chr7 (211-299)||(10661590-10661678)
chr7 (222-301)||(21261169-21261248)
chr7 (223-301)||(23960765-23960843)
chr7 (179-304)||(16221911-16222036)
chr7 (176-304)||(15506923-15507051)
chr7 (222-301)||(23082117-23082196)
chr7 (211-301)||(42636934-42637024)
chr7 (248-304)||(26132293-26132349)
chr7 (176-294)||(11520759-11520878)
chr7 (176-293)||(645826-645942)
chr7 (251-294)||(4542012-4542055)
chr7 (239-293)||(10280600-10280654)
chr7 (221-294)||(14165898-14165971)
chr7 (258-299)||(26193683-26193724)
chr7 (251-299)||(19295519-19295567)
chr7 (33-89)||(21260981-21261037)
[»] chr3 (22 HSPs)
chr3 (40-292)||(21253347-21253599)
chr3 (33-304)||(18063545-18063816)
chr3 (33-283)||(295991-296241)
chr3 (33-304)||(28051688-28051959)
chr3 (150-299)||(17042103-17042246)
chr3 (108-304)||(13514956-13515153)
chr3 (181-303)||(13791375-13791497)
chr3 (131-303)||(18482712-18482884)
chr3 (176-303)||(17135484-17135611)
chr3 (223-304)||(286238-286319)
chr3 (183-304)||(20626981-20627102)
chr3 (176-303)||(7028410-7028537)
chr3 (222-301)||(3551820-3551899)
chr3 (211-301)||(6578890-6578980)
chr3 (222-301)||(979722-979801)
chr3 (181-303)||(15572342-15572464)
chr3 (243-299)||(214438-214494)
chr3 (176-236)||(1918650-1918710)
chr3 (176-303)||(24196218-24196345)
chr3 (243-293)||(18477854-18477904)
chr3 (249-293)||(8225849-8225893)
chr3 (243-299)||(25020156-25020212)
[»] chr5 (19 HSPs)
chr5 (33-304)||(22082029-22082300)
chr5 (12-304)||(30605029-30605325)
chr5 (33-299)||(18221659-18221926)
chr5 (38-304)||(26037334-26037598)
chr5 (33-294)||(38405911-38406172)
chr5 (33-294)||(26328564-26328824)
chr5 (203-301)||(23624562-23624659)
chr5 (176-303)||(22404100-22404227)
chr5 (176-290)||(9421868-9421982)
chr5 (151-304)||(20714081-20714233)
chr5 (176-303)||(23419896-23420023)
chr5 (171-304)||(23757595-23757728)
chr5 (171-304)||(23823051-23823184)
chr5 (183-294)||(22251389-22251500)
chr5 (172-294)||(24190552-24190674)
chr5 (217-299)||(13941358-13941440)
chr5 (243-299)||(25674466-25674522)
chr5 (243-299)||(22183661-22183717)
chr5 (33-89)||(23624425-23624481)
[»] chr1 (20 HSPs)
chr1 (33-293)||(23477285-23477544)
chr1 (38-237)||(15803542-15803741)
chr1 (114-304)||(17850765-17850955)
chr1 (39-304)||(24986539-24986804)
chr1 (108-304)||(20840602-20840798)
chr1 (33-304)||(11667241-11667512)
chr1 (176-294)||(12753753-12753871)
chr1 (171-292)||(22891151-22891272)
chr1 (144-301)||(1626234-1626391)
chr1 (164-303)||(4246719-4246860)
chr1 (131-304)||(20200427-20200599)
chr1 (224-301)||(10339500-10339577)
chr1 (176-303)||(26971737-26971862)
chr1 (176-303)||(13166087-13166214)
chr1 (195-303)||(9452118-9452226)
chr1 (243-299)||(51471434-51471490)
chr1 (248-299)||(25349572-25349623)
chr1 (222-281)||(41330743-41330802)
chr1 (33-79)||(4246586-4246632)
chr1 (243-299)||(8282680-8282736)
[»] chr4 (24 HSPs)
chr4 (33-294)||(15699684-15699945)
chr4 (38-304)||(19183020-19183288)
chr4 (146-299)||(33744133-33744287)
chr4 (176-299)||(33746612-33746736)
chr4 (164-303)||(16384571-16384710)
chr4 (108-260)||(15161866-15162018)
chr4 (176-303)||(23399535-23399662)
chr4 (211-301)||(9069672-9069762)
chr4 (176-294)||(18601008-18601126)
chr4 (223-290)||(19660156-19660223)
chr4 (164-303)||(25117537-25117676)
chr4 (243-293)||(10718235-10718285)
chr4 (243-293)||(10932004-10932054)
chr4 (176-294)||(33898357-33898475)
chr4 (263-304)||(10724977-10725018)
chr4 (263-304)||(10938746-10938787)
chr4 (243-299)||(16654678-16654734)
chr4 (164-236)||(28019984-28020056)
chr4 (243-299)||(49975008-49975064)
chr4 (258-301)||(15623211-15623254)
chr4 (243-293)||(10683007-10683057)
chr4 (243-293)||(10896647-10896697)
chr4 (257-294)||(11905840-11905877)
chr4 (249-294)||(15687070-15687115)
[»] chr8 (11 HSPs)
chr8 (177-304)||(18622355-18622482)
chr8 (38-304)||(33977614-33977880)
chr8 (114-304)||(33962364-33962554)
chr8 (33-301)||(27924794-27925062)
chr8 (115-294)||(26536918-26537098)
chr8 (181-304)||(23540745-23540868)
chr8 (164-291)||(22485814-22485941)
chr8 (164-236)||(22476818-22476890)
chr8 (46-143)||(18622237-18622334)
chr8 (211-301)||(9997225-9997314)
chr8 (249-290)||(23250483-23250524)
[»] scaffold1001 (1 HSPs)
scaffold1001 (164-301)||(644-780)
[»] scaffold0003 (1 HSPs)
scaffold0003 (33-234)||(26955-27155)
[»] scaffold0190 (1 HSPs)
scaffold0190 (108-304)||(15959-16155)
[»] scaffold0226 (3 HSPs)
scaffold0226 (108-304)||(6877-7072)
scaffold0226 (108-304)||(17463-17659)
scaffold0226 (108-304)||(26857-27053)
[»] scaffold0069 (1 HSPs)
scaffold0069 (108-304)||(9299-9495)
[»] scaffold0088 (1 HSPs)
scaffold0088 (164-303)||(37271-37410)
[»] scaffold0213 (1 HSPs)
scaffold0213 (47-304)||(7917-8175)
[»] scaffold0006 (1 HSPs)
scaffold0006 (176-301)||(88439-88564)
[»] scaffold0129 (1 HSPs)
scaffold0129 (176-303)||(16198-16325)
[»] scaffold0259 (1 HSPs)
scaffold0259 (108-304)||(16664-16860)
[»] scaffold0453 (1 HSPs)
scaffold0453 (176-303)||(1340-1467)
[»] scaffold0103 (1 HSPs)
scaffold0103 (176-303)||(25017-25144)
[»] scaffold0185 (1 HSPs)
scaffold0185 (181-299)||(1711-1829)
[»] scaffold0359 (1 HSPs)
scaffold0359 (176-275)||(2583-2682)
[»] scaffold0064 (1 HSPs)
scaffold0064 (243-299)||(45311-45367)
[»] scaffold0520 (2 HSPs)
scaffold0520 (243-294)||(5727-5778)
scaffold0520 (243-294)||(11982-12033)
[»] scaffold0037 (1 HSPs)
scaffold0037 (131-237)||(109664-109770)
[»] scaffold0035 (1 HSPs)
scaffold0035 (222-299)||(38044-38121)
[»] scaffold0059 (1 HSPs)
scaffold0059 (176-303)||(47730-47858)
[»] scaffold0024 (1 HSPs)
scaffold0024 (176-237)||(159764-159825)
[»] scaffold0480 (1 HSPs)
scaffold0480 (38-82)||(11736-11780)


Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-141; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 16 - 304
Target Start/End: Original strand, 21530911 - 21531199
Alignment:
Q  16 atcatccaactgatttgaacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttct 115  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  21530911 atcacccaactgatttgaacacgaattagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataacagattcaaatattttct 21531010  T
Q  116 aaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataa 215  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21531011 aaaatataaacacatctttaggaatattgcacaactgattttgtatatatatgcatgttacttggtcaataagataaggaaatatggtttccttaaataa 21531110  T
Q  216 taaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  21531111 taaaaggcgcgcgtacaaacaggcatgaaacaaggcacaccgaaccataccaggatgttggaacattgtatccaacatcttacagagat 21531199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 33 - 301
Target Start/End: Original strand, 15328875 - 15329138
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| ||||||| ||||||||| |||| || ||||||||||||| ||||| |||  |||| | || |  ||||| |||||||||||||| ||||||| ||    
T  15328875 aacaggaatcagggacaaatatggaaaatcttaaaatgtaggaatatctttaggggcgtccaaaacaacttcaaatattttctaaaatacaaacacaact 15328974  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    |||||||||||    || |||| |||||   ||||||  ||| ||| |||||||||||||||||||||  |||||||||||| |  | || |||||||||    
T  15328975 ttaggaatatt----aactgatcttgtagtgatatgcgcgttgcttagtcaataagataaggaaatattgtttccttaaatagttta-ggtgcgcgtaca 15329069  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    ||||| || || ||| ||||||| ||||| ||||||||||||||||||| |||||||||||| ||||||    
T  15329070 aacaggcaagatacatggcacacagaaccgtgccaggatgttggaacatcgtatccaacatcttacaga 15329138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 24789625 - 24789497
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    ||||||||||||  |||||||||||  |||||||||| |||||| ||||||||||||||||| |  |||   |||||||| ||||| |||||||||||||    
T  24789625 cttggtcaataaattaaggaaatatattttccttaaacaataaagggcgcgcgtacaaacaggcgagaactcaggcacactgaaccgtgccaggatgttg 24789526  T
Q  276 gaacattgtatccaacatcgtacagagat 304  Q
    || ||| |||||||||||| | |||||||    
T  24789525 gagcatcgtatccaacatcttccagagat 24789497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 21249618 - 21249539
Alignment:
Q  222 gcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    ||||| |||||| ||| |||||||||||||||||  |||| ||||||||||||||||||| |||||||||||| ||||||    
T  21249618 gcgcgtgtacaatcaggcatgaaacaaggcacactaaaccgtgccaggatgttggaacatcgtatccaacatcttacaga 21249539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 23759305 - 23759379
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagt 238  Q
    ||||||| ||| |||| |||||||| |||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  23759305 atatgcacgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcgtacaaacagt 23759379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 12911185 - 12911245
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaaca 236  Q
    |||| |||||||| ||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  12911185 cttgatcaataagttaaggaaatattatttccttaaacaataaagggcgcgcgtacaaaca 12911245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 24311246 - 24311196
Alignment:
Q  249 ggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||| ||||    
T  24311246 ggcacactgaaccgtgccaggatgttggaacattgtatccaacatcataca 24311196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 22611584 - 22611645
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacag 237  Q
    |||| |||||||| |||||||||||  |||||||||| |||||| |||||||||||||||||    
T  22611584 cttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcgtacaaacag 22611645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 27108203 - 27108254
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    ||||| ||||||| ||||| ||||||||||||||||||| ||||||||||||    
T  27108203 aaacatggcacactgaaccgtgccaggatgttggaacatcgtatccaacatc 27108254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 24313044 - 24312988
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||| ||||||  ||||| ||||||||| |||||||||||||||||||||| ||||    
T  24313044 aaacagggcacattgaaccgtgccaggatattggaacattgtatccaacatcataca 24312988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 27111792 - 27111843
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    ||||| ||||||  ||||| ||||||||||||||||||| ||||||||||||    
T  27111792 aaacagggcacattgaaccgtgccaggatgttggaacatcgtatccaacatc 27111843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 36397889 - 36397839
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacat 293  Q
    ||||| ||||||| ||||| ||||| ||||||||||||| |||||||||||    
T  36397889 aaacagggcacactgaaccgtgccaagatgttggaacatcgtatccaacat 36397839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 29566763 - 29566800
Alignment:
Q  257 gaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  29566763 gaaccatgccaggatgttggcacattgtgtccaacatc 29566800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 31588240 - 31588296
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||| ||||||| ||||| || || |||||||||||||| ||||||||||| ||||    
T  31588240 aaacagggcacactgaaccgtgacaagatgttggaacattatatccaacatcataca 31588296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 6e-74; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 13 - 304
Target Start/End: Complemental strand, 15930480 - 15930186
Alignment:
Q  13 cagatcatccaactgatttg---aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagta 109  Q
    |||||| |||||||||| ||   |||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||| | ||||| ||||| ||    
T  15930480 cagatcgtccaactgatctgcaaaacacgaatcagagacaaatatagaaagtcctaaaatgtaggaacatctttaggaacgtccaaaatagcttcaaata 15930381  T
Q  110 ttttctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttcctt 209  Q
    |||  |||||||||| ||||||||||||||| ||  | || ||||| |||| | |||||   ||| |||||||||||||||||||||||||| |||||||    
T  15930380 tttcgtaaaatataatcacatctttaggaatgttatataactgattatgtaaagatatgtgcgttgcttggtcaataagataaggaaatatggtttcctt 15930281  T
Q  210 aaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||| || |||||||| |||||||||  ||||||||||||||||| ||||| ||||||||||||||||||| |||||||| ||| |||||||||    
T  15930280 aaatagtataaggcgcgtgtacaaacatgcatgaaacaaggcacactgaaccgtgccaggatgttggaacatcgtatccaatatcttacagagat 15930186  T

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Target: chr6; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 33 - 304
Target Start/End: Complemental strand, 23882307 - 23882036
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| |||||||||| |||| | ||||||| ||||||||||||||||||| ||||||||| | || || ||||| ||||| ||||||||||| |||||||    
T  23882307 aacaagaatcagagaaaaatttggaaagtcctaaaatgtaggaacatctttaggaacgtccaaaacagcttcaaatatttcctaaaatataatcacatct 23882208  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    ||||||||||| ||||| ||||| | || | ||||||  ||| |||||||||||||||||||||||||| ||||||||||||||| || || || |||||    
T  23882207 ttaggaatattccacaactgattctataaagatatgcgcgttgcttggtcaataagataaggaaatatggtttccttaaataatataaagcacgtgtaca 23882108  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||| ||||||||||||||||| ||||| || |||||||||||||||| |||||||||||| |||| ||||    
T  23882107 aacaggcatgaaacaaggcacactgaaccgtgtcaggatgttggaacatcgtatccaacatcttacaaagat 23882036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 33 - 281
Target Start/End: Complemental strand, 29253291 - 29253042
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||| || || ||||| ||||| ||||||||||| |||  ||    
T  29253291 aacaggaatcagagacaaatatggaaagtcctaaaatgtaggaacatcgttaggaacgtctaaaacagcttcaaatatttcctaaaatataatcactact 29253192  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    ||||||||||| ||||| ||||  |||| | ||||||  ||| |||||||||||||||||| ||||| | |||||||||||||||  |||||||||||||    
T  29253191 ttaggaatattccacaactgatcatgtaaagatatgcgcgttgcttggtcaataagataagaaaatacggtttccttaaataatattaggcgcgcgtaca 29253092  T
Q  233 -aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacat 281  Q
     ||||  || || ||| ||||||| ||||| |||||||||||||||||||    
T  29253091 taacaagcaagatacatggcacactgaaccgtgccaggatgttggaacat 29253042  T

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Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 294
Target Start/End: Original strand, 25805958 - 25806219
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| ||||||||||||||||| ||||||| |||| ||| |||||||||| |||| |||||| || |   | || ||| | ||||||||||||  |  ||    
T  25805958 aacaggaatcagagacaaatatggaaagtcctaaagtgtcggaacatctttaggatcgtctaaaacaatattaaatatctcctaaaatataaatgctact 25806057  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    |||  |||||| | ||||||||| |||| | ||||||  ||| |||||||||||||||||||||||||  ||||||| || ||| || ||| | ||||||    
T  25806058 ttaaaaatattcctcaattgattctgtagagatatgcgcgttgcttggtcaataagataaggaaatattgtttccttcaacaatgaatggcacccgtaca 25806157  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
     |||| |||||| | || ||||| ||||| ||||||||||||||||||| ||||||||||||    
T  25806158 tacaggcatgaacccagacacactgaaccgtgccaggatgttggaacatcgtatccaacatc 25806219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 38 - 304
Target Start/End: Complemental strand, 12039312 - 12039048
Alignment:
Q  38 gaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatctttagg 137  Q
    |||||| | |||||||| ||||||| |||||||| |||||||||| |||| |||| | || |    ||| ||||| |||||||||||| ||  ||||||     
T  12039312 gaatcataaacaaatatggaaagtcctaaaatgtcggaacatctttaggatcgtccaaaacaataacaaatatttcctaaaatataaatactactttaga 12039213  T
Q  138 aatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacag 237  Q
    |||||| ||||  ||||| |||| | |||||  |||| |||||||||||||||||||||||||  |||||  ||| |||||| |||||||||| ||  ||    
T  12039212 aatattccacagctgattctgtaaagatatgtgtgttgcttggtcaataagataaggaaatattgtttcc--aaacaataaagggcgcgcgtaaaagtag 12039115  T
Q  238 tcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
     |||||| | || ||||| ||||| ||||| ||||||||||||||| |||||||||| |||||||||    
T  12039114 gcatgaacccagacacactgaaccgtgccaagatgttggaacattgcatccaacatcttacagagat 12039048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 294
Target Start/End: Complemental strand, 8465191 - 8465015
Alignment:
Q  118 aatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataata 217  Q
    |||||||| ||  |||||| | |||| |||| ||||||  ||||| ||||||  ||| ||||||||||||||||||||| |||  ||| |||||| ||||    
T  8465191 aatataaatactactttagaagtattccacagttgattccgtatagatatgcgcgttgcttggtcaataagataaggaactattgttttcttaaacaata 8465092  T
Q  218 aaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    || |||||||||||||  ||  ||||| | ||||||||  |||| ||||||||||||||||||||||||||||||||    
T  8465091 aagggcgcgcgtacaagtaggaatgaacccaggcacactaaaccgtgccaggatgttggaacattgtatccaacatc 8465015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 178 - 302
Target Start/End: Complemental strand, 21722871 - 21722748
Alignment:
Q  178 tggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttgga 277  Q
    |||||||||||||||||||| ||  |||||||||| |||||| |||||||| ||| | || || ||| | |||||||| |||||||||||||||||||||    
T  21722871 tggtcaataagataaggaaagattgtttccttaaacaataaagggcgcgcg-acatataggcaagaacccaggcacactgaaccatgccaggatgttgga 21722773  T
Q  278 acattgtatccaacatcgtacagag 302  Q
    ||||||||||||||||| |||||||    
T  21722772 acattgtatccaacatcttacagag 21722748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 304
Target Start/End: Complemental strand, 17864083 - 17863812
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| |||||||| |||||||| ||||||| |||||||| |||||||| | |||| |||| | || |    ||| |||||||||||||||||| |   ||    
T  17864083 aacaagaatcagaaacaaatatggaaagtcctaaaatgtcggaacatcattaggatcgtccaaaacaataacaaatattttctaaaatataaatattact 17863984  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    |||| |||||| ||||| ||| | |||| | |||||   |||  ||||||||||||||||||||||||  |||||||||| |||||| ||||| ||||||    
T  17863983 ttagaaatattccacaactgagtatgtaaagatatgtgcgttgtttggtcaataagataaggaaatattgtttccttaaacaataaagggcgcacgtaca 17863884  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    || || |||||| | |||||  | ||||| ||| | ||||||  |||||  ||||| ||||| |||||||||    
T  17863883 aataggcatgaacccaggcagtctgaaccgtgctacgatgttaaaacatcatatccgacatcttacagagat 17863812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 304
Target Start/End: Original strand, 20653619 - 20653890
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| |||||||| |||||||| ||||||| |||||||| |||||||||| |||| |||| | || |    ||| |||||  ||||||||||| |   ||    
T  20653619 aacaagaatcagaaacaaatatggaaagtcctaaaatgttggaacatctttaggatcgtccaaaacaataacaaatatttcttaaaatataaatattact 20653718  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    |||| |||||| ||||  ||||| |||| | |||||   ||| |||| ||||||||||||||||||||  |||||||||| |||||| |||||||||| |    
T  20653719 ttagaaatattccacagctgattctgtaaagatatgtgcgttgcttgatcaataagataaggaaatattgtttccttaaacaataaagggcgcgcgtaaa 20653818  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    |  || |||||| | || ||||| ||||| | ||||||| |||||||||   |||||||||| || ||||||    
T  20653819 agtaggcatgaacccagacacactgaaccgttccaggatcttggaacatcacatccaacatcttatagagat 20653890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 303
Target Start/End: Original strand, 17235275 - 17235414
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccat 263  Q
    |||||| |||| |||| |||||||| |||||||||||  |||||||||| |||||  ||||||||||||||||  |  |||   |||||||| ||||| |    
T  17235275 atatgcgtgttgcttgatcaataagttaaggaaatattgtttccttaaacaataacgggcgcgcgtacaaacatgcgagaactcaggcacactgaaccgt 17235374  T
Q  264 gccaggatgttggaacattgtatccaacatcgtacagaga 303  Q
    |||||||||||||| ||| |||||||||||| ||||||||    
T  17235375 gccaggatgttggagcatcgtatccaacatcttacagaga 17235414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 299
Target Start/End: Original strand, 24542335 - 24542470
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccat 263  Q
    |||||| ||||  ||||||||||||||||||||||||| |||||||||||||||  ||| ||| ||||||  || |||||| | ||||| ||  |||| |    
T  24542335 atatgcgtgttggttggtcaataagataaggaaatatggtttccttaaataatactaggtgcgtgtacaagtaggcatgaacccaggcatactaaaccgt 24542434  T
Q  264 gccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||| |||||||||||| |||||||||||| ||||    
T  24542435 gccagaatgttggaacatcgtatccaacatcataca 24542470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 228 - 304
Target Start/End: Original strand, 19598426 - 19598502
Alignment:
Q  228 gtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    |||||||||| ||||||||||||||||| ||||| || |||||||||||||||| |||||||||||| |||||||||    
T  19598426 gtacaaacaggcatgaaacaaggcacactgaaccgtgtcaggatgttggaacatcgtatccaacatcttacagagat 19598502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 21705996 - 21705878
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||||||||||||||||||||||||  ||| |||||| |||||| ||||||| || | | || || ||| | |||||||| ||| ||||||| ||| |||    
T  21705996 cttggtcaataagataaggaaatattgtttacttaaacaataaagggcgcgcataaatataggcaagaacccaggcacactgaagcatgccaagatattg 21705897  T
Q  276 gaacattgtatccaacatc 294  Q
    |||||||||||||||||||    
T  21705896 gaacattgtatccaacatc 21705878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 33666480 - 33666602
Alignment:
Q  172 gttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggat 271  Q
    |||||||| ||||||||||||||||||||  |||||||||| |||||| || ||||||| |||||| |  |||   |||||||| ||||| |||||||||    
T  33666480 gttacttgatcaataagataaggaaatattgtttccttaaacaataaagggtgcgcgtaaaaacaggcgagaactcaggcacactgaaccgtgccaggat 33666579  T
Q  272 gttggaacattgtatccaacatc 294  Q
    |||||| |||  |||||||||||    
T  33666580 gttggagcatcatatccaacatc 33666602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 20465428 - 20465302
Alignment:
Q  108 tattttctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttcc 207  Q
    ||||| |||||||||||| ||  |||||| |||||| ||||  ||||| |||| | |||||   ||| |||||||||||||||||||||||||  |||||    
T  20465428 tatttcctaaaatataaatactactttagaaatattccacagctgattctgtaaagatatgtgcgttgcttggtcaataagataaggaaatattgtttcc 20465329  T
Q  208 ttaaataataaaaggcgcgcgtacaaa 234  Q
    ||||| ||||||  |||||||||||||    
T  20465328 ttaaacaataaagagcgcgcgtacaaa 20465302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 304
Target Start/End: Original strand, 19172104 - 19172235
Alignment:
Q  172 gttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggat 271  Q
    |||||||| |||||||||||||||||||   |||||||||| |||||| |||||||||||||  || |||||| | |||| ||  ||||| |||||||||    
T  19172104 gttacttgatcaataagataaggaaataatgtttccttaaacaataaagggcgcgcgtacaagtag-catgaacctaggctcattgaaccgtgccaggat 19172202  T
Q  272 gttggaacattgtatccaacatcgtacagagat 304  Q
    |||||| |||  || |||||||| || ||||||    
T  19172203 gttggagcatcatacccaacatcttatagagat 19172235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 299
Target Start/End: Original strand, 19077824 - 19077959
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccat 263  Q
    |||||| |||| |||| ||||||| ||||||||||||  |||||||||| ||| || ||||| ||||||   || |||||    |||||||| ||||| |    
T  19077824 atatgcgtgttgcttgatcaataatataaggaaatattgtttccttaaacaatgaagggcgcacgtacatgtaggcatgagctcaggcacactgaaccgt 19077923  T
Q  264 gccaggatgttggaacattgtatccaacatcgtaca 299  Q
    |||| ||||||||||||| |||||||||||| ||||    
T  19077924 gccaagatgttggaacatcgtatccaacatcttaca 19077959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 293
Target Start/End: Original strand, 19168149 - 19168256
Alignment:
Q  186 aagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgta 285  Q
    ||||||||||||||| ||||||||||| ||||||   |||||||||||  || |||||| | ||||||||  |||| ||||||||||||||| ||| |||    
T  19168149 aagataaggaaatattatttccttaaacaataaagaacgcgcgtacaagtaggcatgaacccaggcacactaaaccgtgccaggatgttggagcatcgta 19168248  T
Q  286 tccaacat 293  Q
     |||||||    
T  19168249 cccaacat 19168256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 303
Target Start/End: Original strand, 23879566 - 23879705
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccat 263  Q
    |||||| |||| |||| |||||||| |||||||||||  |||||||||| |||||| || ||| ||||||||||     ||   |||||||| ||||| |    
T  23879566 atatgcgtgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagggtgcgtgtacaaacaggtgaaaactcaggcacactgaaccgt 23879665  T
Q  264 gccaggatgttggaacattgtatccaacatcgtacagaga 303  Q
    |||||||||||||| ||| |||||||||||| | ||||||    
T  23879666 gccaggatgttggagcatcgtatccaacatcttccagaga 23879705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 239 - 304
Target Start/End: Complemental strand, 12385261 - 12385196
Alignment:
Q  239 catgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    |||||| | |||||||| ||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  12385261 catgaacccaggcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttacagagat 12385196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 203 - 304
Target Start/End: Original strand, 13196044 - 13196145
Alignment:
Q  203 tttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagag 302  Q
    |||||||||| |||||| |||||   |||||  || |||||| | |||||||| ||||| ||||||||||||||||||| |||||||||||| || ||||    
T  13196044 tttccttaaacaataaagggcgcatatacaagtaggcatgaacccaggcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttatagag 13196143  T
Q  303 at 304  Q
    ||    
T  13196144 at 13196145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 164 - 304
Target Start/End: Complemental strand, 13869880 - 13869740
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccat 263  Q
    |||||| |||| |||| ||||||||||||||||||||  | |||||||| |||||| || || |||||| | || |  |||   | |||||| ||||| |    
T  13869880 atatgcgtgttgcttgatcaataagataaggaaatattgtgtccttaaacaataaagggtgcacgtacatataggcgagaactcaagcacactgaaccgt 13869781  T
Q  264 gccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||||||||||||| |||| |||||||||| |||| ||||    
T  13869780 gccaggatgttggaaaattgcatccaacatcttacaaagat 13869740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 229
Target Start/End: Complemental strand, 12028654 - 12028556
Alignment:
Q  131 ctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgt 229  Q
    |||||| |||||| ||||  ||||| |||||| |||||| |||| ||||| ||||| |||||||||||||  |||||||||| |||||| |||| ||||    
T  12028654 ctttagaaatattccacagctgattctgtatagatatgcgtgttgcttggacaataggataaggaaatattgtttccttaaacaataaagggcgtgcgt 12028556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 20764399 - 20764346
Alignment:
Q  246 caaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    |||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||    
T  20764399 caaggcacactgaaccttgccaggatgttgaaacattatatccaacatcgtaca 20764346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 17868343 - 17868275
Alignment:
Q  224 gcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaaca 292  Q
    ||||||||||  || |||||||| |||||||| ||||| || || ||||||||||||||||||||||||    
T  17868343 gcgcgtacaagtaggcatgaaaccaggcacactgaaccgtgtcacgatgttggaacattgtatccaaca 17868275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 292
Target Start/End: Complemental strand, 17878126 - 17878058
Alignment:
Q  224 gcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaaca 292  Q
    ||||||||||  || |||||||| |||||||| ||||| || || ||||||||||||||||||||||||    
T  17878126 gcgcgtacaagtaggcatgaaaccaggcacactgaaccgtgtcacgatgttggaacattgtatccaaca 17878058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 303
Target Start/End: Complemental strand, 9281176 - 9281049
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||||||||||  ||| |||||| ||| || |||||| |||||||||| |  |||   |||||||| ||| | |||||||||||||    
T  9281176 cttgatcaataagttaaggaaatattgttttcttaaacaatgaagggcgcgtgtacaaacaggcgagaactcaggcacactgaatcgtgccaggatgttg 9281077  T
Q  276 gaacattgtatccaacatcgtacagaga 303  Q
    || |||  ||||||||||| | ||||||    
T  9281076 gagcatcatatccaacatctttcagaga 9281049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 254
Target Start/End: Original strand, 19100585 - 19100668
Alignment:
Q  171 tgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcaca 254  Q
    |||| |||| ||||||||||||||||||||  |||||||||| |||||| || ||||||||||  || |||||| | |||||||    
T  19100585 tgttgcttgatcaataagataaggaaatattgtttccttaaacaataaagggtgcgcgtacaagtaggcatgaacctaggcaca 19100668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 25970374 - 25970497
Alignment:
Q  180 gtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaac 279  Q
    ||||||||| |||||||||||  |||||||||| |||||| ||||| || ||||||||     ||   |||||||| ||||| ||||| ||||||||| |    
T  25970374 gtcaataagttaaggaaatattgtttccttaaacaataaagggcgcacgcacaaacaggtgacaactcaggcacactgaaccgtgccaagatgttggagc 25970473  T
Q  280 attgtatccaacatcgtacagaga 303  Q
    ||  ||||||||||| ||||||||    
T  25970474 atcatatccaacatcttacagaga 25970497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 25974814 - 25974937
Alignment:
Q  180 gtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaac 279  Q
    ||||||||| |||||||||||  |||||||||| |||||| ||||| || ||||||||     ||   |||||||| ||||| ||||| ||||||||| |    
T  25974814 gtcaataagttaaggaaatattgtttccttaaacaataaagggcgcacgcacaaacaggtgacaactcaggcacactgaaccgtgccaagatgttggagc 25974913  T
Q  280 attgtatccaacatcgtacagaga 303  Q
    ||  ||||||||||| ||||||||    
T  25974914 atcatatccaacatcttacagaga 25974937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 34639605 - 34639555
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacat 293  Q
    ||||||||||||| ||||| ||||| ||||||||||||| |||||||||||    
T  34639605 aaacaaggcacactgaaccgtgccaagatgttggaacatcgtatccaacat 34639555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 26965183 - 26965134
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatctt 82  Q
    |||| |||||||  |||||||| |||||||||||||||||||||||||||    
T  26965183 aacaagaatcagtaacaaatatggaaagtcataaaatgtaggaacatctt 26965134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 302
Target Start/End: Complemental strand, 11992437 - 11992361
Alignment:
Q  226 gcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagag 302  Q
    ||||||| | || |||||| | |||||||| ||| | ||| ||||||||| |||||||||||||||||| |||||||    
T  11992437 gcgtacatataggcatgaacccaggcacactgaatcgtgctaggatgttgaaacattgtatccaacatcttacagag 11992361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 304
Target Start/End: Complemental strand, 19894134 - 19894006
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||||||||||  |||||||||  |||||| | || ||| ||||| || |  |||   |||||||| ||||| ||||| |||||||    
T  19894134 cttgatcaataagttaaggaaatattgtttccttaagcaataaaggtcgtgcgcacaaaaaggcgagaattcaggcacactgaaccgtgccaagatgttg 19894035  T
Q  276 gaacattgtatccaacatcgtacagagat 304  Q
    || ||| |||||||||||| | |||||||    
T  19894034 gagcatcgtatccaacatcttccagagat 19894006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 21316992 - 21316936
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||| ||||||| |||| ||||||||||||||||||||  ||||||||||| ||||    
T  21316992 aaacagggcacactgaactatgccaggatgttggaacatcatatccaacatcataca 21316936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 11961230 - 11961280
Alignment:
Q  244 aacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    |||||| |||||  |||| ||||||||||||||||||| ||||||||||||    
T  11961230 aacaagacacactaaaccgtgccaggatgttggaacatcgtatccaacatc 11961280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 9e-67; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 33 - 304
Target Start/End: Original strand, 14927198 - 14927466
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||| |  | || ||||| ||||| ||||| ||||| |||||||    
T  14927198 aacaggaatcagagacaaatatggaaagtcctaaaatgtaggaacatctttaggagcgtccaatacagcttcaaatatttcctaaa-tataatcacatct 14927296  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    ||||||||||| ||||| ||||| |||| | |||||| |||| |||||||||  ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  14927297 ttaggaatattccacaactgattctgtaaagatatgcgtgttgcttggtcaa--agataagaaaatatggtttccttaaataataaaaggcgcgcgtaca 14927394  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||| | ||||| |||||||||||  |||| ||||||||||||||||||| |||||||||||| || ||||||    
T  14927395 aaccgacatgatacaaggcacactaaaccgtgccaggatgttggaacatcgtatccaacatcttaaagagat 14927466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 33 - 304
Target Start/End: Original strand, 15350664 - 15350932
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||| |  | || ||||| ||||| ||||| ||||| |||||||    
T  15350664 aacaggaatcagagacaaatatggaaagtcctaaaatgtaggaacatctttaggagcgtccaatacagcttcaaatatttcctaaa-tataatcacatct 15350762  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    ||||||||||| ||||| ||||| |||| | |||||| |||| |||||||||  ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  15350763 ttaggaatattccacaactgattctgtaaagatatgcgtgttgcttggtcaa--agataagaaaatatggtttccttaaataataaaaggcgcgcgtaca 15350860  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||| | ||||| |||||||||||  |||| ||||||||||||||||||| |||||||||||| || ||||||    
T  15350861 aaccgacatgatacaaggcacactaaaccgtgccaggatgttggaacatcgtatccaacatcttaaagagat 15350932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 39 - 304
Target Start/End: Complemental strand, 29545744 - 29545479
Alignment:
Q  39 aatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatctttagga 138  Q
    ||||||| |||||||| ||||||| |||||||| |||||||||| |||| |||| | || |    ||| ||||| |||||||||||| ||  ||||||||    
T  29545744 aatcagaaacaaatatggaaagtcctaaaatgtcggaacatctttaggatcgtccaaaacaataacaaatatttcctaaaatataaatactactttagga 29545645  T
Q  139 atattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagt 238  Q
    ||||| ||||| ||||| |||| | ||||||| ||| |||| ||||||||||| ||||||||  |||||||||| |||||| |||||||||||||| ||     
T  29545644 atattccacaactgattctgtaaagatatgcacgttgcttgatcaataagatacggaaatattgtttccttaaacaataaagggcgcgcgtacaaatagg 29545545  T
Q  239 catgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    |||||| | || ||||| ||||||||| |||||||||||||||||||||||||||| |||||||||    
T  29545544 catgaacccagacacactgaaccatgctaggatgttggaacattgtatccaacatcttacagagat 29545479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 108 - 304
Target Start/End: Original strand, 20992168 - 20992364
Alignment:
Q  108 tattttctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttcc 207  Q
    ||||| |||||||||||| ||  |||||| ||||||  ||| ||||||||||||| ||||||  ||| |||||||||||||||||||||||||  |||||    
T  20992168 tatttcctaaaatataaatactactttagaaatattcaacagttgattttgtatagatatgcgcgttgcttggtcaataagataaggaaatattgtttcc 20992267  T
Q  208 ttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||| ||||||  | ||||||||||| || |||||| | |||||||| ||||| |||||||||||||||||||  ||||||||||| |||||||||    
T  20992268 ttaaacaataaagagtgcgcgtacaaataggcatgaacctaggcacactgaaccgtgccaggatgttggaacatcatatccaacatcttacagagat 20992364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 33 - 304
Target Start/End: Original strand, 12326361 - 12326633
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagatt-caagtattttctaaaatataaacacatc 131  Q
    |||| |||| ||| |||||||| ||||||| |||||||| |||||||||| |||| ||| |  || | ||  ||| |||||||||||||||||| ||  |    
T  12326361 aacaagaattagaaacaaatatggaaagtcctaaaatgtcggaacatctttaggatcgtttccaacaaataacaaatattttctaaaatataaatactac 12326460  T
Q  132 tttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtac 231  Q
    ||||| |||||| ||||  | |||  ||||| ||||||  ||| |||||||||||||||||||||||||  |||||||||| ||||||  | ||||||||    
T  12326461 tttagaaatattccacagctaattcggtatagatatgcgcgtttcttggtcaataagataaggaaatattgtttccttaaacaataaagagtgcgcgtac 12326560  T
Q  232 aaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||  || |||||| | | |||||| ||||| ||||||||||||||||||| |||||||||||| || ||||||    
T  12326561 aagtaggcatgaacccatgcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttatagagat 12326633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 33 - 234
Target Start/End: Original strand, 16437325 - 16437525
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| |||||| |||||||||| ||||||| |||||| |||||||||||| ||||||||| | || |  ||||| ||||| ||||||||||| |||| ||    
T  16437325 aacaggaatcaaagacaaatatggaaagtcctaaaatataggaacatctttaggaacgtccaaaacaacttcaaatatttcctaaaatataatcacaact 16437424  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    ||||||||||| ||||| ||||  || | | |||||   ||| |||| ||||||||||||||| ||||| |||||||||||||| |||||| ||||||||    
T  16437425 ttaggaatattccacaactgatcctgcaaagatatgtgcgttgcttgatcaataagataaggacatatggtttccttaaataat-aaaggcacgcgtaca 16437523  T
Q  233 aa 234  Q
    ||    
T  16437524 aa 16437525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 146 - 304
Target Start/End: Complemental strand, 20924603 - 20924445
Alignment:
Q  146 acaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaa 245  Q
    |||||||||| |||| | ||||||  ||  ||||||||  |||||||||||||||| ||||||||||||||| || ||  ||| | |||||| |||||||    
T  20924603 acaattgattatgtacagatatgcgcgtagcttggtcagcaagataaggaaatatggtttccttaaataatataacgcatgcgcataaacagacatgaaa 20924504  T
Q  246 caaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    |||||||||| ||| | ||||||||||||||||||| |||||||||||| ||| |||||    
T  20924503 caaggcacactgaatcttgccaggatgttggaacatcgtatccaacatcttacggagat 20924445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 304
Target Start/End: Original strand, 4459387 - 4459560
Alignment:
Q  131 ctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgta 230  Q
    |||||| |||||| ||||  ||||| || ||| |||| |  ||| ||||| ||||||| |||||||||||  ||||| |||| |||||| ||||||||||    
T  4459387 ctttagaaatattccacagctgattctggatagatattcgcgttgcttggacaataagttaaggaaatattgtttccataaacaataaagggcgcgcgta 4459486  T
Q  231 caaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    |||| || |||||| | |||||||| ||| | ||| |||||||||||||||||||||||||||| |||||||||    
T  4459487 caaataggcatgaacctaggcacactgaatcgtgctaggatgttggaacattgtatccaacatcttacagagat 4459560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 171 - 304
Target Start/End: Complemental strand, 16207352 - 16207219
Alignment:
Q  171 tgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccagga 270  Q
    |||| |||| |||| |||||||||||||||  |||||||||| |||||| || ||||||||||  || |||||| | |||||||| ||||||||||||||    
T  16207352 tgttgcttgatcaacaagataaggaaatattgtttccttaaacaataaagggtgcgcgtacaagtaggcatgaacccaggcacactgaaccatgccagga 16207253  T
Q  271 tgttggaacattgtatccaacatcgtacagagat 304  Q
    |||||||||||  ||||||||||| |||||||||    
T  16207252 tgttggaacatcatatccaacatcttacagagat 16207219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 199
Target Start/End: Original strand, 10280404 - 10280570
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| |||| ||||||||| || ||||||| ||||||||||||||||||| ||||||||| | || |  ||||| ||||| ||||||||||| |||| ||    
T  10280404 aacaggaattagagacaaaaatagaaagtcctaaaatgtaggaacatctttaggaacgtccaaaacaacttcaaatatttcctaaaatataatcacaact 10280503  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaata 199  Q
    ||||||||||  ||||| ||||  | || | |||||| |||| ||| ||||||||||||||||||||    
T  10280504 ttaggaatatgccacaactgatcatataaagatatgcgtgttgctttgtcaataagataaggaaata 10280570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 301
Target Start/End: Complemental strand, 10038146 - 10038071
Alignment:
Q  226 gcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    |||||||| ||| ||| ||||||||||||| |||||||||||| ||||||||||||| ||||||||||| ||||||    
T  10038146 gcgtacaatcaggcataaaacaaggcacactgaaccatgccagtatgttggaacattatatccaacatcttacaga 10038071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 299
Target Start/End: Original strand, 10661590 - 10661678
Alignment:
Q  211 aataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||| ||||| |||||||||||| || |||||||  |||||||| ||||| ||| ||||||||||||||| |||||||||||| ||||    
T  10661590 aataagaaaagacgcgcgtacaaataggcatgaaatcaggcacactgaaccgtgctaggatgttggaacatcgtatccaacatcttaca 10661678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 21261169 - 21261248
Alignment:
Q  222 gcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    |||||||||||| ||  ||| ||||||||||||| ||||| |||||||||||||||||||  ||||||||||| ||||||    
T  21261169 gcgcgcgtacaatcaagcataaaacaaggcacactgaaccgtgccaggatgttggaacatcatatccaacatcttacaga 21261248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 23960765 - 23960843
Alignment:
Q  223 cgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    ||||||||||| ||| ||| ||| ||||||||| ||| | ||||||||||||||||||| |||||||||||| ||||||    
T  23960765 cgcgcgtacaatcaggcataaaataaggcacactgaatcgtgccaggatgttggaacatcgtatccaacatcttacaga 23960843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 16222036 - 16221911
Alignment:
Q  179 ggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaa 278  Q
    |||||| |||||||||||||||  |||||||||| || ||| || |||| |||||  ||  ||||| | || ||||   || ||||||||||||||||||    
T  16222036 ggtcaacaagataaggaaatattgtttccttaaacaagaaagggggcgcatacaagtaggtatgaacctagacacagtaaatcatgccaggatgttggaa 16221937  T
Q  279 cattgtatccaacatcgtacagagat 304  Q
    ||| |||||||||||| |||||||||    
T  16221936 catcgtatccaacatcttacagagat 16221911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 304
Target Start/End: Original strand, 15506923 - 15507051
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||||||||||||||||| ||||||  |||||||||| ||||||  |||||||||||   || || ||| | ||||| ||  |||| || |||||||||     
T  15506923 cttggtcaataagataagaaaatattgtttccttaaacaataaagagcgcgcgtacaggtaggcaagaacccaggcatacttaaccgtgtcaggatgttt 15507022  T
Q  276 gaacattgtatccaacatcgtacagagat 304  Q
    |||||| |||||||||||| || ||||||    
T  15507023 gaacatcgtatccaacatcttatagagat 15507051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 23082196 - 23082117
Alignment:
Q  222 gcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    ||||||||| || ||| ||| ||| ||||||||| ||||| |||||||||||||||||||  ||||||||||| ||||||    
T  23082196 gcgcgcgtataatcaggcataaaataaggcacactgaaccgtgccaggatgttggaacatcatatccaacatcttacaga 23082117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 301
Target Start/End: Original strand, 42636934 - 42637024
Alignment:
Q  211 aataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    ||||| ||||| |||||||||||| || |||||||  || ||||| ||||| |||||||| |||||||||| |||| ||||||| ||||||    
T  42636934 aataagaaaagacgcgcgtacaaataggcatgaaagcagacacactgaaccgtgccaggacgttggaacatcgtattcaacatcttacaga 42637024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 26132349 - 26132293
Alignment:
Q  248 aggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    |||||||| ||||| |||||||||||||||||||  ||||||||||| |||||||||    
T  26132349 aggcacactgaaccgtgccaggatgttggaacatcatatccaacatcttacagagat 26132293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 11520878 - 11520759
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtac-aaacagtcatgaaacaaggcacaccgaaccatgccaggatgtt 274  Q
    |||| |||||||| |||||||||||  |||||||||| |||||| ||||||||||| |||||| |  |||      ||||| ||||| ||||||||||||    
T  11520878 cttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcgtacaaaacaggcgagaactcgaacacactgaaccgtgccaggatgtt 11520779  T
Q  275 ggaacattgtatccaacatc 294  Q
    | | ||||||||||||||||    
T  11520778 gaagcattgtatccaacatc 11520759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 645826 - 645942
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||| ||||||  |||||||||| |||||| | ||||||||||||||| |  |||   |||||||| ||||| |||||||||||||    
T  645826 cttgatcaataagttaagaaaatattgtttccttaaacaataaa-gacgcgcgtacaaacaggcgagaactcaggcacactgaaccgtgccaggatgttg 645924  T
Q  276 gaacattgtatccaacat 293  Q
     | ||| | |||||||||    
T  645925 aagcatcgcatccaacat 645942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 251 - 294
Target Start/End: Complemental strand, 4542055 - 4542012
Alignment:
Q  251 cacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    ||||| ||||||||||||||||||||||||| || |||||||||    
T  4542055 cacactgaaccatgccaggatgttggaacatggtgtccaacatc 4542012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 293
Target Start/End: Original strand, 10280600 - 10280654
Alignment:
Q  239 catgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacat 293  Q
    ||||| ||||||||||| ||||| || ||||||||||||| || |||||||||||    
T  10280600 catgatacaaggcacactgaaccgtggcaggatgttggaatatcgtatccaacat 10280654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 14165898 - 14165971
Alignment:
Q  221 ggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    |||||||||||| | || |||||| | ||||||||  | | |||| |||||||||| |||||||||||||||||    
T  14165898 ggcgcgcgtacatataggcatgaacccaggcacacttagctatgctaggatgttgggacattgtatccaacatc 14165971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 26193724 - 26193683
Alignment:
Q  258 aaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    |||||||||| ||||||||||||| |||||||||||| ||||    
T  26193724 aaccatgccaagatgttggaacatcgtatccaacatcataca 26193683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 19295519 - 19295567
Alignment:
Q  251 cacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||| ||||| ||||| ||||||||||||| |||||||||||| ||||    
T  19295519 cacactgaaccgtgccaagatgttggaacatcgtatccaacatcataca 19295567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 21260981 - 21261037
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaac 89  Q
    |||| |||||||  |||||||  ||||||||||| ||||||||||||||| ||||||    
T  21260981 aacaagaatcagtaacaaataaggaaagtcataatatgtaggaacatctttaggaac 21261037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 9e-67; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 40 - 292
Target Start/End: Complemental strand, 21253599 - 21253347
Alignment:
Q  40 atcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatctttaggaa 139  Q
    |||||||||||| || |||||||||||||| || ||||||||| ||||||||| | || || ||||| ||||| ||||||||||| ||||||||||||||    
T  21253599 atcagagacaaaaatggaaagtcataaaatataagaacatctttaggaacgtccaaaacagcttcaaatatttcctaaaatataatcacatctttaggaa 21253500  T
Q  140 tattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtc 239  Q
    |||| ||||| ||||| |||| | |||||| |||| ||||||||||||||||||||||||||  || ||||||||||| || || ||||||||||||| |    
T  21253499 tattacacaactgattctgtaaagatatgcgtgttgcttggtcaataagataaggaaatatgggtttcttaaataatataaagcacgcgtacaaacaggc 21253400  T
Q  240 atgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaaca 292  Q
    |||||||||||||||| ||||| || |||||||||||||||| ||||| ||||    
T  21253399 atgaaacaaggcacactgaaccgtgtcaggatgttggaacatcgtatctaaca 21253347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 33 - 304
Target Start/End: Complemental strand, 18063816 - 18063545
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| |||| |||||||||||| ||||||| |||||||| | |||||||| || |||||| | || |   | || ||||| |||||||||||| ||  ||    
T  18063816 aacaagaattagagacaaatatggaaagtcctaaaatgtcgaaacatctttagaaacgtccaaaacaatattaaatatttcctaaaatataaatactact 18063717  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    |||| |||||| | ||  ||||| |||| | |||||| |||| |||||||||||||||||||||||||  |||||||||| ||| |||||||| ||||||    
T  18063716 ttagaaatattcctcagctgattctgtagaaatatgcgtgttgcttggtcaataagataaggaaatattgtttccttaaacaatgaaaggcgcacgtaca 18063617  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
     | || || ||| |||||||||| ||||| ||||||||||||||||| | |||||||||||| |||| ||||    
T  18063616 tataggcaagaaccaaggcacactgaaccgtgccaggatgttggaacgtcgtatccaacatcttacaaagat 18063545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 33 - 283
Target Start/End: Original strand, 295991 - 296241
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| ||||||||||||||||| ||||||| |||||||| |||||||||| |||| |||| | || |    ||| ||||| ||||||||||||  || ||    
T  295991 aacaagaatcagagacaaatatggaaagtcctaaaatgtcggaacatctttaggatcgtccaaaacaataacaaatatttcctaaaatataaatgcaact 296090  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    ||||||||||| |||   ||||| |||| | ||| || |||| |||||||||||||||||||||||||  |||||||||| |||||| ||||| ||||||    
T  296091 ttaggaatattccacctctgattctgtaaagatacgcgtgttgcttggtcaataagataaggaaatattgtttccttaaacaataaagggcgcacgtaca 296190  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattg 283  Q
    || |  |||||| | |||||||| ||||| ||||||||| |||||||||||    
T  296191 aatatgcatgaacccaggcacactgaaccgtgccaggattttggaacattg 296241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 304
Target Start/End: Original strand, 28051688 - 28051959
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaa----cac 128  Q
    |||| |||||||| |||||||| ||||||| |||||||| |||||||||| |||| |||| | || |  ||||| ||||| |||||||||| |    |||    
T  28051688 aacaagaatcagaaacaaatatggaaagtcctaaaatgtcggaacatctttaggagcgtccaaaacaacttcaaatatttcctaaaatatatataatcac 28051787  T
Q  129 atctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcg 228  Q
    | ||||||||||||| ||||| ||||| |||| | ||| ||  |||  |||||||||| |||||||||||||  ||||||||| |||||  |||||||||    
T  28051788 aactttaggaatattccacaactgattctgtaaagatacgcgcgttgtttggtcaataggataaggaaatattgtttccttaagtaatattaggcgcgcg 28051887  T
Q  229 tacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    |    | || ||| ||   | ||||||  |||| ||||||||||||||||||| |||||||||||| |||||||||    
T  28051888 t----ataggcataaacgcatgcacacaaaaccgtgccaggatgttggaacatcgtatccaacatcttacagagat 28051959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 150 - 299
Target Start/End: Complemental strand, 17042246 - 17042103
Alignment:
Q  150 ttgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaag 249  Q
    |||||| |||| | |||||||  || |||||||||||||||||||||||||| ||||||||||||||| |||||||| ||      || |||||| | ||    
T  17042246 ttgattatgtacagatatgcacattgcttggtcaataagataaggaaatatggtttccttaaataatataaggcgcgtgt------aggcatgaacccag 17042153  T
Q  250 gcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    |||||| ||||| ||||||||||| ||||||| |||||||||||| ||||    
T  17042152 gcacactgaaccgtgccaggatgtcggaacatcgtatccaacatcataca 17042103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 304
Target Start/End: Complemental strand, 13515153 - 13514956
Alignment:
Q  108 tattttctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttcc 207  Q
    ||||| ||||||||||||  |  |||| | |||||| ||||| ||||| |||||| ||||||  ||| |||| ||||||||||||||||||||  |||||    
T  13515153 tatttcctaaaatataaaatctacttttgaaatattccacaactgattctgtatagatatgcgcgttgcttgatcaataagataaggaaatattgtttcc 13515054  T
Q  208 ttaaataataaaaggcgcgcgtacaaacagtcatgaaac-aaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||| |||||| ||||| || ||||  || || | |||  | |||||| ||||| ||| ||||||||||||||| |||||||||||| |||||||||    
T  13515053 ttaaacaataaagggcgcacgcacaagtaggcaagtaactcaagcacactgaaccgtgctaggatgttggaacatcgtatccaacatcttacagagat 13514956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 303
Target Start/End: Original strand, 13791375 - 13791497
Alignment:
Q  181 tcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaaca 280  Q
    ||||||||||||||||||||  |||||||||| |||||| ||||||||||||||||| |  |||   |||||||  |||||||| |||||||||| | ||    
T  13791375 tcaataagataaggaaatattgtttccttaaacaataaagggcgcgcgtacaaacaggcgagaactcaggcacattgaaccatgtcaggatgttgaagca 13791474  T
Q  281 ttgtatccaacatcgtacagaga 303  Q
    |||||||||||||| | ||||||    
T  13791475 ttgtatccaacatcttccagaga 13791497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 303
Target Start/End: Complemental strand, 18482884 - 18482712
Alignment:
Q  131 ctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgta 230  Q
    |||||| |||||| ||||||||||| |    | ||||||  ||| |||| ||||||||||||||||||||  |||||||||| |||||| || |||||||    
T  18482884 ctttagaaatattccacaattgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatattgtttccttaaacaataaagggtgcgcgta 18482785  T
Q  231 caaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagaga 303  Q
    ||||||| |  |||   || ||||| ||||| || |||||||||| ||||| |||||||||||| ||||||||    
T  18482784 caaacaggcgagaactcagacacactgaaccgtgtcaggatgttgaaacatcgtatccaacatcttacagaga 18482712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 176 - 303
Target Start/End: Complemental strand, 17135611 - 17135484
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||||||||||  |||||||||| ||||||||||||||||||| | || |  |||   |||||||||||||| |||||||||||||    
T  17135611 cttgatcaataagttaaggaaatattgtttccttaaacaataaaaggcgcgcgtacatagaggcgagaactcaggcacaccgaaccgtgccaggatgttg 17135512  T
Q  276 gaacattgtatccaacatcgtacagaga 303  Q
    || |||  ||||||||||| | ||||||    
T  17135511 gagcatcatatccaacatcttccagaga 17135484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 304
Target Start/End: Complemental strand, 286319 - 286238
Alignment:
Q  223 cgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||||||||||||  ||||||||||| ||||| ||||| ||| ||||||||||||||| |||||||||||| |||||||||    
T  286319 cgcgcgtacaaacatgcatgaaacaagacacactgaaccgtgctaggatgttggaacatcgtatccaacatcttacagagat 286238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 304
Target Start/End: Complemental strand, 20627102 - 20626981
Alignment:
Q  183 aataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacatt 282  Q
    ||||||||||||||||||  |||||||||| |||||| ||||  | |||||  || |||||| | || |||||  |||| ||||||||||||||||||||    
T  20627102 aataagataaggaaatattgtttccttaaacaataaagggcgtacatacaagtaggcatgaacccagacacactaaaccgtgccaggatgttggaacatt 20627003  T
Q  283 gtatccaacatcgtacagagat 304  Q
    |||||||| ||| |||||||||    
T  20627002 gtatccaatatcttacagagat 20626981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 303
Target Start/End: Complemental strand, 7028537 - 7028410
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| ||||||||||||||||||||  ||||||||||||||||| ||||| |||||||| || |  |||   || ||||| ||||| |||||  ||||||    
T  7028537 cttgatcaataagataaggaaatattgtttccttaaataataaagggcgcacgtacaaataggcgagaactcagtcacactgaaccgtgccaaaatgttg 7028438  T
Q  276 gaacattgtatccaacatcgtacagaga 303  Q
    || ||| |||||||||||| | ||||||    
T  7028437 gagcatcgtatccaacatcttccagaga 7028410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 3551899 - 3551820
Alignment:
Q  222 gcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    ||||||| |||| ||| ||| ||||||||||||| ||||| ||||| |||||||||||||  ||||||||||| ||||||    
T  3551899 gcgcgcgaacaatcaggcataaaacaaggcacactgaaccgtgccacgatgttggaacatcatatccaacatcttacaga 3551820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 301
Target Start/End: Complemental strand, 6578980 - 6578890
Alignment:
Q  211 aataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    ||||| ||||| || ||||||||| ||  ||||||| || ||||| ||||| || |||||||||||||||| |||||||||||| ||||||    
T  6578980 aataagaaaagacgtgcgtacaaataggtatgaaaccagacacactgaaccgtgtcaggatgttggaacatcgtatccaacatcttacaga 6578890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 979801 - 979722
Alignment:
Q  222 gcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    |||||| ||||| ||| ||| ||||||||||||| ||||| ||||  |||||||||||||  ||||||||||| ||||||    
T  979801 gcgcgcatacaatcaggcataaaacaaggcacactgaaccgtgccgagatgttggaacatcatatccaacatcttacaga 979722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 303
Target Start/End: Complemental strand, 15572464 - 15572342
Alignment:
Q  181 tcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaaca 280  Q
    ||||||||||||||||||||  |||||||||| |||||| || | ||||||||| || |   ||   |||||||| ||||| |||||  ||||| || |     
T  15572464 tcaataagataaggaaatattgtttccttaaacaataaagggtgtgcgtacaaatagccgataactcaggcacactgaaccttgccaacatgttagagcg 15572365  T
Q  281 ttgtatccaacatcgtacagaga 303  Q
    |||||||||||||| ||||||||    
T  15572364 ttgtatccaacatcttacagaga 15572342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 214494 - 214438
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||||| ||||| ||||| ||||| ||||||||||||| |||||||||||| ||||    
T  214494 aaacaagacacactgaaccgtgccaagatgttggaacatcgtatccaacatcataca 214438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 1918710 - 1918650
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaaca 236  Q
    |||| |||||||| |||||||||||  |||||||||| |||||| ||||| ||||||||||    
T  1918710 cttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcacgtacaaaca 1918650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 176 - 303
Target Start/End: Original strand, 24196218 - 24196345
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||  |||||||||||  |||||||||| |||||| |  |||| ||||||||| |  |||   |||||||| ||||| |||||||||||||    
T  24196218 cttgatcaataaattaaggaaatattgtttccttaaacaataaaggatgcgcatacaaacaggcgagaactcaggcacactgaaccgtgccaggatgttg 24196317  T
Q  276 gaacattgtatccaacatcgtacagaga 303  Q
     | ||| | |||||||||| | ||||||    
T  24196318 aagcatcgcatccaacatcttccagaga 24196345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 18477854 - 18477904
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacat 293  Q
    ||||| ||||||| ||||| ||||| ||||||||||||| |||||||||||    
T  18477854 aaacagggcacactgaaccgtgccaagatgttggaacatcgtatccaacat 18477904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 8225849 - 8225893
Alignment:
Q  249 ggcacaccgaaccatgccaggatgttggaacattgtatccaacat 293  Q
    ||||||| ||||| ||||| ||||||||||||| |||||||||||    
T  8225849 ggcacactgaaccgtgccaagatgttggaacatcgtatccaacat 8225893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 25020156 - 25020212
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    |||||||||||||  |||| || || ||||||||||||| |||||||||||| ||||    
T  25020156 aaacaaggcacactaaaccgtggcaagatgttggaacatcgtatccaacatcataca 25020212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 33 - 304
Target Start/End: Complemental strand, 22082300 - 22082029
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| ||||||||||||||||| ||||||| ||||||||  ||||||||| |||| |||| | || |    ||| ||||| |||||||||||||||  ||    
T  22082300 aacaagaatcagagacaaatatggaaagtcttaaaatgtcagaacatctttaggatcgtccaaaacaataacaaatatttcctaaaatataaacactact 22082201  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    ||||||||||| ||||| ||||| |||| |||||||   ||| |||||||||||||||| ||||||||  |||||||||| |||||| ||||| ||||||    
T  22082200 ttaggaatattccacaactgattatgtaaatatatgtgcgttccttggtcaataagatagggaaatattgtttccttaaacaataaagggcgcacgtaca 22082101  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||  ||||||   | |||||| ||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  22082100 aacatgcatgaactcaagcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttacagagat 22082029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 12 - 304
Target Start/End: Complemental strand, 30605325 - 30605029
Alignment:
Q  12 acagatcatccaactgatttg---aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtct-ataatagattcaag 107  Q
    ||||||| |||||||||| ||   |||| |||| ||| |||||||| ||||||| || ||||| |||||||||| |||| ||||  | || |  |||||     
T  30605325 acagatcgtccaactgatctgcaaaacaagaattagaaacaaatatggaaagtcctataatgtcggaacatctttaggatcgtcacaaaacaacttcaaa 30605226  T
Q  108 tattttctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttcc 207  Q
    ||||| |||||||||||||||| ||||||||||||| ||||| ||||| |||| | ||||||  ||| |||| ||||||||||||||||||||  |||||    
T  30605225 tatttcctaaaatataaacacaactttaggaatattccacaactgattctgtaaagatatgcgcgttgcttgatcaataagataaggaaatattgtttcc 30605126  T
Q  208 ttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||| |||||| ||||| |||||||| |  ||||||   |||||||| ||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  30605125 ttaaacaataaagggcgcccgtacaaataagcatgaactcaggcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttacagagat 30605029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 33 - 299
Target Start/End: Original strand, 18221659 - 18221926
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| |||||| |||||||||| ||||||| ||||||||||||||||||| ||||| ||| | || |  ||||| ||||||||||||||||| |||| ||    
T  18221659 aacaggaatcatagacaaatatggaaagtcctaaaatgtaggaacatctttaggaatgtccaaaacaacttcaaatattttctaaaatataatcacaact 18221758  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    ||||||||||| ||||| ||||  |||| | |||||  |||| |||| ||||||||||||||||||| | ||||||||||||||   |||| | ||||||    
T  18221759 ttaggaatattacacaactgatcctgtaaagatatgtgtgttgcttgatcaataagataaggaaatacggtttccttaaataatcttaggcacacgtaca 18221858  T
Q  233 aa-cagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    || ||  ||||| ||| ||||||| ||||||| ||| |||||||||||||  ||||||||||| ||||    
T  18221859 aagcatgcatgatacatggcacactgaaccattccaagatgttggaacatcatatccaacatcttaca 18221926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 38 - 304
Target Start/End: Original strand, 26037334 - 26037598
Alignment:
Q  38 gaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatctttagg 137  Q
    |||||||| |||||||| ||||||| |||||||| |||||||||| |||| |||| | || |    ||| ||||| |||||||||||| ||  |||||||    
T  26037334 gaatcaga-acaaatatggaaagtcctaaaatgtcggaacatctttaggatcgtccaaaacaataacaaatatttcctaaaatataaatactactttagg 26037432  T
Q  138 aatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacag 237  Q
    |||||| ||||| |||||||||| | ||||||  ||| ||||||||||| |||||||||||||  |||||||||| |||||| || |||||  |||| |     
T  26037433 aatattccacaactgattttgtaaagatatgcgcgttgcttggtcaataggataaggaaatattgtttccttaaacaataaagggtgcgcg-ccaaatat 26037531  T
Q  238 tcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
     |||||| | |||||||| ||||||||||||||||||||||||| |||||| ||||| |||||||||    
T  26037532 gcatgaaccgaggcacactgaaccatgccaggatgttggaacatcgtatccgacatcttacagagat 26037598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 33 - 294
Target Start/End: Original strand, 38405911 - 38406172
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| ||||||||||||||||| ||||||| |||||||| ||| ||| || |||| |||| | || |     || ||||| ||||||||||||||   ||    
T  38405911 aacaagaatcagagacaaatatggaaagtcctaaaatgtcggatcatttttaggatcgtccaaaacaataaaaaatatttcctaaaatataaacattact 38406010  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    ||||||||||| ||||| ||||| |||| | |||| |  ||| |||||||||||||||||||||||||  |||||||||| |||||| ||| ||||||||    
T  38406011 ttaggaatattccacaactgattctgtaaagatatacgcgttgcttggtcaataagataaggaaatattgtttccttaaacaataaagggcacgcgtaca 38406110  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    ||||  || || ||| ||||||| ||||| ||| |||||| |||||||| ||||||||||||    
T  38406111 aacaagcaagatacagggcacactgaaccgtgctaggatgctggaacatcgtatccaacatc 38406172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 294
Target Start/End: Complemental strand, 26328824 - 26328564
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| ||||||||||||||||| ||||||| ||||||||  ||||||||| |||| |||| | || |   | || ||||||||||||||||| |||| ||    
T  26328824 aacaagaatcagagacaaatatggaaagtcctaaaatgtcagaacatctttaggagcgtccaaaacaacattaaatattttctaaaatataatcacaact 26328725  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    ||||||||||| ||||| ||||| | || | |||||   ||||||||||||| ||||||||||||  |  |||||||  | || | ||||||||||||||    
T  26328724 ttaggaatattacacaactgattctataaagatatgtgcgttacttggtcaacaagataaggaaaagttgtttcctttta-aagataaggcgcgcgtaca 26328626  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    ||||  ||||||   || ||||| |||||||    |||||||||||||| ||||||||||||    
T  26328625 aacaagcatgaactcagacacactgaaccatattgggatgttggaacatcgtatccaacatc 26328564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 301
Target Start/End: Original strand, 23624562 - 23624659
Alignment:
Q  203 tttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    ||||||||||||||||| |||||||||| ||||| ||| || ||| ||||||| ||||| ||||||||||||||||||| |||||||||||| ||||||    
T  23624562 tttccttaaataataaa-ggcgcgcgtagaaacaatcaagatacatggcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttacaga 23624659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 176 - 303
Target Start/End: Complemental strand, 22404227 - 22404100
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||||||||||  |||||||||| |||||  ||||| ||||||||||  |  ||||  || || || |||||||||||||||||||    
T  22404227 cttgatcaataagctaaggaaatattgtttccttaaacaataacgggcgcacgtacaaacatgcgagaaatcagacatactgaaccatgccaggatgttg 22404128  T
Q  276 gaacattgtatccaacatcgtacagaga 303  Q
    ||||||||||||||||||| | ||||||    
T  22404127 gaacattgtatccaacatcttccagaga 22404100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 290
Target Start/End: Complemental strand, 9421982 - 9421868
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| ||||||||||||||||||||  |||||||||| |||||  |||||||||||||  || |||||| | |||| ||| ||||| ||| |||||||||    
T  9421982 cttgatcaataagataaggaaatattgtttccttaaacaataaggggcgcgcgtacaagtaggcatgaacccaggctcactgaaccgtgctaggatgttg 9421883  T
Q  276 gaacattgtatccaa 290  Q
    |||||| ||||||||    
T  9421882 gaacatcgtatccaa 9421868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 304
Target Start/End: Complemental strand, 20714233 - 20714081
Alignment:
Q  151 tgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaagg 250  Q
    ||||| |||| | ||||||  ||| |||||||| ||||||| || || ||| |||||||||| || | || |||||||||||||||| ||||||| ||||    
T  20714233 tgattctgtacagatatgcgcgttgcttggtcagtaagatacgggaaaatggtttccttaaa-aagataaagcgcgcgtacaaacaggcatgaaagaagg 20714135  T
Q  251 cacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    |||||  |||| | ||||||||||||||||| ||||| |||||| || ||||||    
T  20714134 cacactaaaccgttccaggatgttggaacatcgtatctaacatcttatagagat 20714081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 303
Target Start/End: Complemental strand, 23420023 - 23419896
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| ||||||||||||||||||||  |||||||||  |||||| |||||||||||| |||  |  |||   || ||||  ||||| |||||||||||||    
T  23420023 cttgatcaataagataaggaaatattgtttccttaaccaataaagggcgcgcgtacatacatgcgagaactcagacacattgaaccgtgccaggatgttg 23419924  T
Q  276 gaacattgtatccaacatcgtacagaga 303  Q
    || |||||||||||||||| ||||||||    
T  23419923 gagcattgtatccaacatcttacagaga 23419896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 304
Target Start/End: Complemental strand, 23757728 - 23757595
Alignment:
Q  171 tgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccagga 270  Q
    |||| |||||||||||  ||||||||||||  |||||||||| |||||| || |||||||||   |  |||||| | || ||||| ||| | ||||||||    
T  23757728 tgttgcttggtcaatacaataaggaaatattgtttccttaaacaataaagggtgcgcgtacatgtatgcatgaacctagacacactgaatcgtgccagga 23757629  T
Q  271 tgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||||||||| |||||||||||| || ||||||    
T  23757628 tgttggaacatcgtatccaacatcatatagagat 23757595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 304
Target Start/End: Complemental strand, 23823184 - 23823051
Alignment:
Q  171 tgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccagga 270  Q
    |||| |||||||||||  ||||||||||||  |||||||||| |||||| || |||||||||   |  |||||| | || ||||| ||| | ||||||||    
T  23823184 tgttgcttggtcaatacaataaggaaatattgtttccttaaacaataaagggtgcgcgtacatgtatgcatgaacctagacacactgaatcgtgccagga 23823085  T
Q  271 tgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||||||||| |||||||||||| || ||||||    
T  23823084 tgttggaacatcgtatccaacatcatatagagat 23823051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 294
Target Start/End: Complemental strand, 22251500 - 22251389
Alignment:
Q  183 aataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacatt 282  Q
    |||||| ||||||||||   ||||||||||  ||||| ||||||||||||||||| |  |||   |||||||| ||||| ||||||||||||||| |||     
T  22251500 aataagttaaggaaatactgtttccttaaacgataaagggcgcgcgtacaaacaggcgagaactcaggcacactgaaccgtgccaggatgttggagcatc 22251401  T
Q  283 gtatccaacatc 294  Q
    ||||||||||||    
T  22251400 gtatccaacatc 22251389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 294
Target Start/End: Original strand, 24190552 - 24190674
Alignment:
Q  172 gttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggat 271  Q
    |||||||| |||||| |||||||||||||  |||||||||| |||||  |||||||||||||| || |  |||   | |||||| ||||| |||||| ||    
T  24190552 gttacttgatcaatatgataaggaaatattgtttccttaaacaataaggggcgcgcgtacaaataggcgagaactcaagcacactgaaccgtgccagaat 24190651  T
Q  272 gttggaacattgtatccaacatc 294  Q
    |||||| ||| ||||||||||||    
T  24190652 gttggagcatcgtatccaacatc 24190674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 13941440 - 13941358
Alignment:
Q  217 aaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||| ||||||||||| ||| ||| |||| |||||||  |||||||| ||||||||||||||||  ||||||||||| ||||    
T  13941440 aaaagacgcgcgtacaatcaggcataaaactaggcacattgaaccatgtcaggatgttggaacatcatatccaacatcttaca 13941358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 25674466 - 25674522
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||||||||||| |||||||| ||  ||||||||||||| ||||||||||||||||    
T  25674466 aaacaaggcacactgaaccatgtcaaaatgttggaacattatatccaacatcgtaca 25674522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 22183717 - 22183661
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||| ||||||| ||||| ||||| ||| ||||||||| |||||||||||| ||||    
T  22183717 aaacagggcacactgaaccgtgccaagatattggaacatcgtatccaacatcataca 22183661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 23624425 - 23624481
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaac 89  Q
    |||| |||||||||||||| |   |||||| ||||||||||||||||||| ||||||    
T  23624425 aacaggaatcagagacaaaaaagaaaagtcctaaaatgtaggaacatctttaggaac 23624481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 4e-50; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 33 - 293
Target Start/End: Complemental strand, 23477544 - 23477285
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| |||||| |||||||||| ||||||| || ||||||| |||||||| ||||||||| | |  |  ||||| ||||| ||||||||||| |||| ||    
T  23477544 aacaggaatcatagacaaatatggaaagtcctacaatgtagaaacatctttaggaacgtccaaatcaacttcaaatatttcctaaaatataatcacaact 23477445  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    ||||||||||| ||||||||||  |||| | ||||||| ||| ||||||||||||||||||||||| || |||||||||||||||  ||||| |||||||    
T  23477444 ttaggaatattccacaattgatcctgtaaagatatgcacgttgcttggtcaataagataaggaaatgtggtttccttaaataatattaggcg-gcgtaca 23477346  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacat 293  Q
    || || |||  ||| |||||||  ||||| ||||| |||||||||||||||||| ||||||    
T  23477345 aataggcatacaaccaggcacattgaaccgtgccaagatgttggaacattgtattcaacat 23477285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 38 - 237
Target Start/End: Complemental strand, 15803741 - 15803542
Alignment:
Q  38 gaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatctttagg 137  Q
    |||||||||||||||||  ||| || |||||||||||| |||||| | ||| ||| |  | || ||||| ||||| ||||||||||| ||||||||||||    
T  15803741 gaatcagagacaaatatgaaaaatcctaaaatgtaggatcatctttatgaatgtccaatacagcttcaaatatttcctaaaatataatcacatctttagg 15803642  T
Q  138 aatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacag 237  Q
    |||||| || || ||||| |||| | ||||||   ||  ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  15803641 aatattccataactgattctgtaaagatatgcgcattgtttggtcaataagataaggaaatatggtttccttaaataataaaaggcgcgcatacaaacag 15803542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 114 - 304
Target Start/End: Complemental strand, 17850955 - 17850765
Alignment:
Q  114 ctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaat 213  Q
    ||||||||||| ||||||||||||| |||| ||||| ||||| |||| | |||||   ||| |||||||||||||||||||||||||| |||||||||||    
T  17850955 ctaaaatataatcacatctttaggagtattacacaactgattctgtaaagatatgggcgttgcttggtcaataagataaggaaatatggtttccttaaat 17850856  T
Q  214 aataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    |||| || |||| || ||||||   ||||||  ||||||||| ||||| ||  |||||||||||||||||||||||| ||| |||| ||||    
T  17850855 aatataaagcgcacgcacaaactaacatgaactaaggcacactgaaccgtgttaggatgttggaacattgtatccaaaatcttacaaagat 17850765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 304
Target Start/End: Original strand, 24986539 - 24986804
Alignment:
Q  39 aatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatctttagga 138  Q
    ||||||| |||||||| ||||||| |||||||| |||||||||| | || |||  | || | |  ||| ||||| |||||||||||| |   |||||| |    
T  24986539 aatcagaaacaaatatggaaagtcctaaaatgtcggaacatctttatgatcgttcaaaacaaaaacaaatatttcctaaaatataaatattactttagaa 24986638  T
Q  139 atattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagt 238  Q
    ||||| ||||| |||||||||||  ||||||  ||| |||||||||||||||||| ||||||  |||||||||| |||||| || || | |||||| ||     
T  24986639 atattccacaactgattttgtatggatatgcgcgttgcttggtcaataagataagaaaatattgtttccttaaacaataaagggtgcacatacaaatagg 24986738  T
Q  239 catgaaacaagg-cacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
     ||| |||| || ||||| ||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  24986739 tatg-aacacggtcacactgaaccgtgccagaatgttggaacattgtatccaacatcttacagagat 24986804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 108 - 304
Target Start/End: Complemental strand, 20840798 - 20840602
Alignment:
Q  108 tattttctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttcc 207  Q
    ||||| ||||||||||||  |  |||||| |||||| ||||| ||||||| |||| ||||||  ||| |||| |||||||||||||||||||| |||||     
T  20840798 tatttcctaaaatataaaatctactttagaaatattccacaactgattttttatagatatgcgcgttgcttgatcaataagataaggaaatattatttca 20840699  T
Q  208 ttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||| |||||| |||||| ||||||  || || |||   |||||||| ||||  || |||||||||||||||| |||||||||||| |||||||||    
T  20840698 ttaaacaataaagggcgcgtgtacaagtaggcaagaactcaggcacactgaactgtgtcaggatgttggaacatcgtatccaacatcttacagagat 20840602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 33 - 304
Target Start/End: Complemental strand, 11667512 - 11667241
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| |||| ||| |||||||| |||| || |||||||| | |||||||| |||| |||| | || |    ||| ||||| |||||||||||| ||  ||    
T  11667512 aacaagaattagaaacaaatatggaaaatcctaaaatgttgtaacatctttaggatcgtccaaaacaataacaaatatttcctaaaatataaatactact 11667413  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    |||| |||||| ||||| | ||| |||| | ||||||  ||| ||||||||||||||||||||||||   |||||||||| |||||| ||  ||||||||    
T  11667412 ttagaaatattccacaacttattctgtaaagatatgcgcgttgcttggtcaataagataaggaaatagtttttccttaaacaataaagggtccgcgtaca 11667313  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    || || |||||| | || |||||  |||  ||||| ||||||||||||| |||||||||||| |||||||||    
T  11667312 aataggcatgaacccagacacacttaactgtgccatgatgttggaacatcgtatccaacatcttacagagat 11667241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 176 - 294
Target Start/End: Original strand, 12753753 - 12753871
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||||||||||||||||||||||||| ||||||||||||||  |||| ||||||||||  || |  ||| | |||||||| ||||| |||||||||||||    
T  12753753 cttggtcaataagataaggaaatatggtttccttaaataattcaaggtgcgcgtacaagtaggctcgaacccaggcacactgaaccgtgccaggatgttg 12753852  T
Q  276 gaacattgtatccaacatc 294  Q
    |||||| ||||||||||||    
T  12753853 gaacatcgtatccaacatc 12753871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 292
Target Start/End: Complemental strand, 22891272 - 22891151
Alignment:
Q  171 tgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccagga 270  Q
    |||| ||||||||||||| |||||||||||  |||||||||| |||||| | |||||||||||  || || |||   |||||||| ||||| ||||||||    
T  22891272 tgttgcttggtcaataagttaaggaaatattgtttccttaaacaataaaggacgcgcgtacaagtaggcaagaactcaggcacactgaaccgtgccagga 22891173  T
Q  271 tgttggaacattgtatccaaca 292  Q
    ||||||||||| ||||||||||    
T  22891172 tgttggaacatagtatccaaca 22891151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 301
Target Start/End: Original strand, 1626234 - 1626391
Alignment:
Q  144 gcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatga 243  Q
    |||||| |||||||||||| ||||||  ||| ||||||||  |||||| || ||  || |||||||||| || | || ||||||||||||  || |||||    
T  1626234 gcacaactgattttgtatagatatgcgcgttgcttggtcagcaagatatgggaaagtggtttccttaaaaaagataaagcgcgcgtacaagtaggcatga 1626333  T
Q  244 aacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    ||| |||||||| ||||  | |||||||||||||||||  ||||||||||| ||||||    
T  1626334 aaccaggcacactgaactgttccaggatgttggaacatcatatccaacatcttacaga 1626391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 164 - 303
Target Start/End: Original strand, 4246719 - 4246860
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccat 263  Q
    |||||| |||| |||| ||||||||||||||||||||  |||||||||| |||||| | | |||||||| |||| |  |||   ||||||||  ||||||    
T  4246719 atatgcgtgttgcttgatcaataagataaggaaatattgtttccttaaacaataaaggacacgcgtacatacaggcgagaactcaggcacactaaaccat 4246818  T
Q  264 gccaggatgttggaacat--tgtatccaacatcgtacagaga 303  Q
    ||||||||||||||  ||  ||||||||||||| ||||||||    
T  4246819 gccaggatgttggaggatcgtgtatccaacatcttacagaga 4246860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 131 - 304
Target Start/End: Complemental strand, 20200599 - 20200427
Alignment:
Q  131 ctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgta 230  Q
    |||||| |||||| ||||| |||||   || | ||||||  ||| |||| ||||||||||| ||||||||  |||||||||| |||||| ||||||||||    
T  20200599 ctttagaaatattccacaactgattccttagagatatgcgcgttgcttgatcaataagata-ggaaatattgtttccttaaacaataaagggcgcgcgta 20200501  T
Q  231 caaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    |||  ||  | | |   ||||| || ||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  20200500 caagtaggaaagtactcaggcatactgaaccgtgccaggatgttggaacatcgtatccaacatcttacagagat 20200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 224 - 301
Target Start/End: Complemental strand, 10339577 - 10339500
Alignment:
Q  224 gcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    |||||||||| ||| ||| ||||||||||||| ||||| || || ||||||||||||| |||||||||||| ||||||    
T  10339577 gcgcgtacaatcagacataaaacaaggcacactgaaccgtgtcaagatgttggaacatcgtatccaacatcttacaga 10339500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 303
Target Start/End: Complemental strand, 26971862 - 26971737
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||||||||||  |||||||||| ||||||  | ||||||||||| || |  |||   |||||||| ||||| |||||||||||||    
T  26971862 cttgatcaataagttaaggaaatattgtttccttaaacaataaa--gagcgcgtacaaataggcgagaactcaggcacactgaaccgtgccaggatgttg 26971765  T
Q  276 gaacattgtatccaacatcgtacagaga 303  Q
    || ||| |||||||||||| | ||||||    
T  26971764 gagcatcgtatccaacatcttccagaga 26971737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 303
Target Start/End: Original strand, 13166087 - 13166214
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||||||||||  |||||||||| |||||| ||||||| |||| |||| |  |||   |||||||| ||||| | |||||||||||    
T  13166087 cttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcttacatacaggcgagaactcaggcacactgaaccgtaccaggatgttg 13166186  T
Q  276 gaacattgtatccaacatcgtacagaga 303  Q
     | ||| | |||||||||| | ||||||    
T  13166187 aagcatcgcatccaacatcttccagaga 13166214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 303
Target Start/End: Original strand, 9452118 - 9452226
Alignment:
Q  195 aaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    |||||| ||||||||||| |||||  |||||||||||||  || |  ||| | |||||||| ||||  |||||| |||||||| ||| ||||||||||||    
T  9452118 aaatattatttccttaaacaataacgggcgcgcgtacaagtaggcgagaacccaggcacactgaactgtgccagaatgttggagcatcgtatccaacatc 9452217  T
Q  295 gtacagaga 303  Q
     || |||||    
T  9452218 ttatagaga 9452226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 51471490 - 51471434
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||| ||||||| ||||| ||||||||||||||||| |  ||||||||||||||||    
T  51471490 aaacagggcacactgaaccgtgccaggatgttggaacttcatatccaacatcgtaca 51471434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 299
Target Start/End: Complemental strand, 25349623 - 25349572
Alignment:
Q  248 aggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    |||||||| |||||||||||||||||||||| ||  ||||||||||| ||||    
T  25349623 aggcacactgaaccatgccaggatgttggaatatcatatccaacatcttaca 25349572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 281
Target Start/End: Complemental strand, 41330802 - 41330743
Alignment:
Q  222 gcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacat 281  Q
    |||||||||||| ||| ||| ||||||||||||| ||||| ||  |||||||||||||||    
T  41330802 gcgcgcgtacaatcaggcataaaacaaggcacactgaaccgtgataggatgttggaacat 41330743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 4246586 - 4246632
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacat 79  Q
    |||| |||||||| |||||||||||||||| |||||||| |||||||    
T  4246586 aacaagaatcagaaacaaatattgaaagtcctaaaatgtcggaacat 4246632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 8282680 - 8282736
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||||||| ||| ||||  || |||||||||||||||| |||||||||||| ||||    
T  8282680 aaacaaggctcactgaactgtgtcaggatgttggaacatcgtatccaacatcataca 8282736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 33 - 294
Target Start/End: Complemental strand, 15699945 - 15699684
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| ||||||||||||||||| ||||||| ||||||||||||||||||| |||| |||| | || |  ||||| ||||| ||||||||| |||||| ||    
T  15699945 aacaagaatcagagacaaatatggaaagtcctaaaatgtaggaacatctttaggagcgtccaaaacaacttcaaatatttcctaaaatatgaacacaact 15699846  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    ||||||||||| || |  |||||   || | |||||| |||| |||||||||||||||||| | ||||| |||||||| |||||| | |||||| ||||     
T  15699845 ttaggaatattccaaagctgattcattaaagatatgcgtgtttcttggtcaataagataagaatatatggtttccttatataatatatggcgcgtgtact 15699746  T
Q  233 aacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    ||||  || || ||| ||||||| ||||  ||||||||||||||||||| | ||||||||||    
T  15699745 aacatgcaagatacatggcacactgaactgtgccaggatgttggaacatcggatccaacatc 15699684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 38 - 304
Target Start/End: Complemental strand, 19183288 - 19183020
Alignment:
Q  38 gaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatctttagg 137  Q
    |||||||||||||||||  |||||| ||||||||||||  ||||| |||||| || | || |  ||||| ||||||||||||||| | ||||||||||||    
T  19183288 gaatcagagacaaatatgtaaagtcctaaaatgtaggaggatctttaggaacatccaaaacaacttcaaatattttctaaaatatgatcacatctttagg 19183189  T
Q  138 aatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacag 237  Q
    |||||| ||||| ||||| || | | |||||   |||  |||||||| |||||||||||||||| |||||||||||||||||  ||||| ||||||| ||    
T  19183188 aatattacacaactgattctgaaaagatatgtgcgttgtttggtcaagaagataaggaaatatggtttccttaaataataaagagcgcgtgtacaaatag 19183089  T
Q  238 tcatgaa-acaag-gcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
     ||||||  || | |||||| ||||| |||||||||||  |||||| |||||||||||| |||||||||    
T  19183088 gcatgaactcatgcgcacactgaaccgtgccaggatgtcagaacatcgtatccaacatcttacagagat 19183020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 146 - 299
Target Start/End: Original strand, 33744133 - 33744287
Alignment:
Q  146 acaattgattttgtatatatatgcatgtta-cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaa 244  Q
    |||| ||||||||||||||||||| ||||  |||||||| |||||||| |||||||| ||||||||||||||| ||||| |||||| |   || ||||||    
T  33744133 acaagtgattttgtatatatatgcgtgtttgcttggtcagtaagataaagaaatatggtttccttaaataatacaaggcacgcgtaaatgtaggcatgaa 33744232  T
Q  245 acaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
     | || || || ||||| ||| |||||||||||||||  ||||||||||| ||||    
T  33744233 cccagacagactgaaccgtgctaggatgttggaacatcttatccaacatcataca 33744287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 176 - 299
Target Start/End: Original strand, 33746612 - 33746736
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacac-cgaaccatgccaggatgtt 274  Q
    |||||||| ||||||||||||||||| ||||||||||||||| ||||||||| |||||  || |||||| | || |||||  |||||  |||||||||||    
T  33746612 cttggtcagtaagataaggaaatatggtttccttaaataatacaaggcgcgcatacaagtaggcatgaacccagacacacttgaaccgcgccaggatgtt 33746711  T
Q  275 ggaacattgtatccaacatcgtaca 299  Q
     |||||| |||||||||||| ||||    
T  33746712 agaacatcgtatccaacatcataca 33746736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 164 - 303
Target Start/End: Original strand, 16384571 - 16384710
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccat 263  Q
    |||||| ||||  ||| |||||||| |||||||||||  |||||||||| |||||| ||||||||||||||||| |  ||| | |||||||| ||||  |    
T  16384571 atatgcgtgttgtttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcgtacaaacaggcgagaacccaggcacactgaactgt 16384670  T
Q  264 gccaggatgttggaacattgtatccaacatcgtacagaga 303  Q
    | |||||||||||| ||| |||||||||||| | ||||||    
T  16384671 gtcaggatgttggagcatcgtatccaacatcttccagaga 16384710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 260
Target Start/End: Complemental strand, 15162018 - 15161866
Alignment:
Q  108 tattttctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttcc 207  Q
    ||||| |||||||||||| ||  |||||| |||||| ||||  ||||| |||| | |||||   ||| |||||||||||||||||||||||||  |||||    
T  15162018 tatttcctaaaatataaatactactttagaaatattccacagctgattctgtaaagatatgtgcgttgcttggtcaataagataaggaaatattgtttcc 15161919  T
Q  208 ttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaac 260  Q
    ||||| |||||| |||||| ||||||| || | |||| | |||||||| ||||    
T  15161918 ttaaacaataaagggcgcgtgtacaaataggcttgaacccaggcacactgaac 15161866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 176 - 303
Target Start/End: Complemental strand, 23399662 - 23399535
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||||||||||  ||||||||||||||||| ||||||||||||||||  |  |||   ||||||||  |||| |||||||||||||    
T  23399662 cttgatcaataagttaaggaaatattgtttccttaaataataaagggcgcgcgtacaaacaagcgagaactcaggcacactaaaccgtgccaggatgttg 23399563  T
Q  276 gaacattgtatccaacatcgtacagaga 303  Q
     | ||| | |||||||||| | ||||||    
T  23399562 aagcatcgcatccaacatcttccagaga 23399535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 301
Target Start/End: Original strand, 9069672 - 9069762
Alignment:
Q  211 aataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    ||||| ||||| |||| ||||||| || |||||||  |||||||| ||||| | ||||||||||||||||| |||||||||||| ||||||    
T  9069672 aataagaaaagacgcgagtacaaataggcatgaaatcaggcacactgaaccgttccaggatgttggaacatcgtatccaacatcttacaga 9069762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 18601126 - 18601008
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||| ||||||  |||||||||| |||||| ||||| | ||||| ||| |  |||   |||||||| ||||| |||||||||||||    
T  18601126 cttgatcaataagttaagtaaatattgtttccttaaacaataaagggcgcacatacaaccaggcgagaactcaggcacactgaaccgtgccaggatgttg 18601027  T
Q  276 gaacattgtatccaacatc 294  Q
    || ||| ||||||||||||    
T  18601026 gagcatcgtatccaacatc 18601008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 19660156 - 19660223
Alignment:
Q  223 cgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaa 290  Q
    |||||||||||| || ||||||   |||||||| ||||||||||| |||||||||||||| |||||||    
T  19660156 cgcgcgtacaaataggcatgaactcaggcacactgaaccatgccacgatgttggaacattctatccaa 19660223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 303
Target Start/End: Original strand, 25117537 - 25117676
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccat 263  Q
    ||||| ||||| |||| |||||||| |||||||||||  |||||||||| ||||||  ||||||||||||| || |  |||   | |||  | ||| | |    
T  25117537 atatgaatgttgcttgatcaataagttaaggaaatattgtttccttaaacaataaagagcgcgcgtacaaataggcgagaactcatgcaacctgaagcgt 25117636  T
Q  264 gccaggatgttggaacattgtatccaacatcgtacagaga 303  Q
    |||||||||||||| ||| |||||||||||| | ||||||    
T  25117637 gccaggatgttggagcatcgtatccaacatcttccagaga 25117676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 10718235 - 10718285
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacat 293  Q
    ||||| ||||||| ||||| ||||||||||||||||||| |||||||||||    
T  10718235 aaacagggcacactgaaccgtgccaggatgttggaacatcgtatccaacat 10718285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 10932004 - 10932054
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacat 293  Q
    ||||| ||||||| ||||| ||||||||||||||||||| |||||||||||    
T  10932004 aaacagggcacactgaaccgtgccaggatgttggaacatcgtatccaacat 10932054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 294
Target Start/End: Complemental strand, 33898475 - 33898357
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||||||||||  |||||||||| |||||| |||||||||||| |||| |  |||   ||||| || ||||| | | |||||||||    
T  33898475 cttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcgtacatacaggcgagaacgcaggcatactgaaccgtacgaggatgttg 33898376  T
Q  276 gaacattgtatccaacatc 294  Q
    || ||| ||||| ||||||    
T  33898375 gagcatcgtatctaacatc 33898357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 10724977 - 10725018
Alignment:
Q  263 tgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  10724977 tgccaggatgttggaacatcgtatccaacatcttacagagat 10725018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 263 - 304
Target Start/End: Original strand, 10938746 - 10938787
Alignment:
Q  263 tgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||||||||||||||||| |||||||||||| |||||||||    
T  10938746 tgccaggatgttggaacatcgtatccaacatcttacagagat 10938787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 16654734 - 16654678
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||| ||||||| |||| |||||||||||||| |||||  ||||||||||||||||    
T  16654734 aaacagggcacactgaactatgccaggatgttgaaacatcatatccaacatcgtaca 16654678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 28019984 - 28020056
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaaca 236  Q
    ||||||| ||| |||| |||||||| ||| ||||||| ||||||||||| |||||| ||| |||| |||||||    
T  28019984 atatgcacgttgcttgatcaataagttaaagaaatattatttccttaaacaataaagggctcgcgaacaaaca 28020056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 49975008 - 49975064
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||| ||||||| ||| | ||||||||||||||||||| ||||||||||| |||||    
T  49975008 aaacagggcacactgaatcgtgccaggatgttggaacatcgtatccaacattgtaca 49975064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 258 - 301
Target Start/End: Original strand, 15623211 - 15623254
Alignment:
Q  258 aaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||    
T  15623211 aaccgtgccaggatgttggaacatcgtatccaacatcttacaga 15623254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 10683007 - 10683057
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacat 293  Q
    ||||| ||||||| ||||| ||||| ||||||||||||| |||||||||||    
T  10683007 aaacagggcacactgaaccgtgccaagatgttggaacatcgtatccaacat 10683057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 10896647 - 10896697
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacat 293  Q
    ||||| ||||||| ||||| ||||| ||||||||||||| |||||||||||    
T  10896647 aaacagggcacactgaaccgtgccaagatgttggaacatcgtatccaacat 10896697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 294
Target Start/End: Original strand, 11905840 - 11905877
Alignment:
Q  257 gaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    ||||||||||||||||||||||||| || |||||||||    
T  11905840 gaaccatgccaggatgttggaacatcgtgtccaacatc 11905877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 15687115 - 15687070
Alignment:
Q  249 ggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    |||| |||||||||||||||||||||||||||| || | |||||||    
T  15687115 ggcataccgaaccatgccaggatgttggaacatcgtgtacaacatc 15687070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 6e-40; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 177 - 304
Target Start/End: Original strand, 18622355 - 18622482
Alignment:
Q  177 ttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttgg 276  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || | || |||||||||||||| ||||| ||||| ||||||||    
T  18622355 ttggtcaataagataaggaaatatgatttccttaaataatataaagcgcgcgtacacaccggcaagaaacaaggcacactgaaccgtgccaagatgttgg 18622454  T
Q  277 aacattgtatccaacatcgtacagagat 304  Q
    ||||| |||||||||||| |||||||||    
T  18622455 aacatcgtatccaacatcttacagagat 18622482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 38 - 304
Target Start/End: Original strand, 33977614 - 33977880
Alignment:
Q  38 gaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagatt-caagtattttctaaaatataaacacatctttag 136  Q
    |||||||||||||||||  |||||| |||||||| |||||||||  |||| |||| | |||  ||  ||| | ||| |||||| ||||| ||  ||||||    
T  33977614 gaatcagagacaaatatgtaaagtcctaaaatgtcggaacatctctaggatcgtcca-aatcaataacaaatttttcctaaaaaataaatactactttag 33977712  T
Q  137 gaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaaca 236  Q
    ||||||| ||||| ||||| |||| | ||||||   || |||| ||||||||||||||||||||  |||||||||| |||||| ||||| |||||||| |    
T  33977713 gaatattccacaactgattctgtaaagatatgcgcattgcttgatcaataagataaggaaatattgtttccttaaacaataaagggcgcacgtacaaata 33977812  T
Q  237 gtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    | |||||| | || ||||| ||||  || ||||||||||||||||  ||||||||||| |||||||||    
T  33977813 ggcatgaacccagacacactgaactgtgtcaggatgttggaacataatatccaacatcttacagagat 33977880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 114 - 304
Target Start/End: Original strand, 33962364 - 33962554
Alignment:
Q  114 ctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaat 213  Q
    |||||| ||||| ||  ||||||||||||| ||| | ||||| |||| | ||||||  ||| |||| ||||||||||||||||||||  ||||||||||     
T  33962364 ctaaaaaataaatactactttaggaatattccacgactgattctgtaaagatatgcgcgttgcttgatcaataagataaggaaatattgtttccttaaac 33962463  T
Q  214 aataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    |||||| |||||||||||||| || |||||    |||||||| ||||  |||||||||||||||||||  ||||||||||| |||||||||    
T  33962464 aataaagggcgcgcgtacaaagagacatgacctcaggcacactgaactgtgccaggatgttggaacataatatccaacatcttacagagat 33962554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 301
Target Start/End: Complemental strand, 27925062 - 27924794
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagatt-caagtattttctaaaatataaacacatc 131  Q
    |||| |||||||| |||||||| ||||||| |||||||| |||||||||| |||| ||| |  ||   ||  ||| |||||  |||||||||||  |  |    
T  27925062 aacaagaatcagaaacaaatatggaaagtcctaaaatgtcggaacatctttaggatcgt-tccaaccaataacaaatatttcataaaatataaaatctac 27924964  T
Q  132 tttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtac 231  Q
    ||||| |||||| |||| |||||| |||||| ||||||  ||| ||| |||||||||||||||||||||  |||||||||| ||||||  ||| ||||||    
T  27924963 tttagaaatattccacagttgattctgtatagatatgcgcgttgctttgtcaataagataaggaaatattgtttccttaaacaataaagagcgtgcgtac 27924864  T
Q  232 aaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    ||  || |||||| | |||||||| ||| | || ||||||||||||||||  ||||||||||| ||||||    
T  27924863 aagtaggcatgaacccaggcacactgaatcgtgtcaggatgttggaacatcttatccaacatcttacaga 27924794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 115 - 294
Target Start/End: Original strand, 26536918 - 26537098
Alignment:
Q  115 taaaatataaacacatctttaggaatattgcacaattgatttt-gtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaat 213  Q
    ||||||||||| ||  ||||||||||||| ||||| ||||||| ||| | ||||||  ||| |||||||||||||||||||||||||  ||||||||||     
T  26536918 taaaatataaatactactttaggaatatttcacaactgatttttgtaaagatatgcgcgttgcttggtcaataagataaggaaatattgtttccttaaac 26537017  T
Q  214 aataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
     ||||  ||||| |||||||| || |||||| | || ||||| ||||| ||||| |||||||||||||  |||||||||||    
T  26537018 cataagtggcgcacgtacaaataggcatgaacctagacacactgaaccgtgccatgatgttggaacatcatatccaacatc 26537098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 304
Target Start/End: Complemental strand, 23540868 - 23540745
Alignment:
Q  181 tcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaaca 280  Q
    ||||||||||||||||||||  |||||||||| |||||| |||||||||||||  || ||| || | ||||||||  |||  ||||||||||||||||||    
T  23540868 tcaataagataaggaaatattgtttccttaaacaataaagggcgcgcgtacaagtaggcataaacccaggcacactaaactgtgccaggatgttggaaca 23540769  T
Q  281 ttgtatccaacatcgtacagagat 304  Q
    | ||||||| |||| |||||||||    
T  23540768 tcgtatccatcatcttacagagat 23540745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 291
Target Start/End: Original strand, 22485814 - 22485941
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccat 263  Q
    |||||| |||| |||| |||||||| || | ||||||  |||||||||| |||||| ||||||||||||||||| |  |||   |||||||| ||||  |    
T  22485814 atatgcgtgttgcttgatcaataagttaggaaaatattgtttccttaaacaataaagggcgcgcgtacaaacagacgagaactcaggcacactgaactgt 22485913  T
Q  264 gccaggatgttggaacattgtatccaac 291  Q
    |||||||||||||| ||| |||||||||    
T  22485914 gccaggatgttggagcatcgtatccaac 22485941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 164 - 236
Target Start/End: Original strand, 22476818 - 22476890
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaaca 236  Q
    |||||| |||| |||| |||||||| || ||||||||  |||||||||| |||||| ||||||||||||||||    
T  22476818 atatgcgtgttgcttgatcaataagttagggaaatattgtttccttaaacaataaagggcgcgcgtacaaaca 22476890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 18622237 - 18622334
Alignment:
Q  46 gacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatctttaggaatatt 143  Q
    |||| |||| ||||||| |||| |||||||||||||| ||||| ||| | || |  ||||| ||||| ||||||||||| |||| |||||| ||||||    
T  18622237 gacacatatggaaagtcctaaagtgtaggaacatctttaggaatgtccaaaacaacttcaaatatttcctaaaatataatcacacctttagaaatatt 18622334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 301
Target Start/End: Original strand, 9997225 - 9997314
Alignment:
Q  211 aataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    ||||| ||||| |||||||||||| || |||||||  |||||||| ||||| |||||  ||| | |||||| |||||||||||| ||||||    
T  9997225 aataagaaaagacgcgcgtacaaataggcatgaaatcaggcacactgaaccgtgccaaaatg-tagaacatcgtatccaacatcttacaga 9997314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 290
Target Start/End: Original strand, 23250483 - 23250524
Alignment:
Q  249 ggcacaccgaaccatgccaggatgttggaacattgtatccaa 290  Q
    ||||||| ||||||||||||||||||||||||| || |||||    
T  23250483 ggcacactgaaccatgccaggatgttggaacatcgtgtccaa 23250524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 164 - 301
Target Start/End: Original strand, 644 - 780
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccat 263  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||     || |||| ||| |||||||| ||||| |    
T  644 atatgcatgttacttggtcaataagataaggaaatatggtttccttaaataatacaaggcgcgcgtaagtgtaggcatg-aaccaggcacactgaaccgt 742  T
Q  264 gccaggatgttggaacattgtatccaacatcgtacaga 301  Q
    |||| ||||||||||||| |||||||||||| ||||||    
T  743 gccaagatgttggaacatcgtatccaacatcttacaga 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 33 - 234
Target Start/End: Original strand, 26955 - 27155
Alignment:
Q  33 aacacgaatcagagacaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagattcaagtattttctaaaatataaacacatct 132  Q
    |||| |||||| |||||||||| ||||||| |||||| |||||||||||| ||||||||| | || |  ||||| ||||| ||||||||||| |||| ||    
T  26955 aacaggaatcaaagacaaatatggaaagtcctaaaatataggaacatctttaggaacgtccaaaacaacttcaaatatttcctaaaatataatcacaact 27054  T
Q  133 ttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtaca 232  Q
    ||||||||||| ||||| ||||  || | | |||||   ||| |||| ||||||||||||||| ||||| |||||||||||||| |||||| ||||||||    
T  27055 ttaggaatattccacaactgatcctgcaaagatatgtgcgttgcttgatcaataagataaggacatatggtttccttaaataat-aaaggcacgcgtaca 27153  T
Q  233 aa 234  Q
    ||    
T  27154 aa 27155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 108 - 304
Target Start/End: Complemental strand, 16155 - 15959
Alignment:
Q  108 tattttctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttcc 207  Q
    |||||||||||||||||   |  |||||| ||||||  |||  ||||| |||||| ||||||   || ||||||||||||||||| |||||||  |||||    
T  16155 tattttctaaaatataatatctactttagaaatattcaacatctgattctgtatagatatgcgcattgcttggtcaataagataatgaaatattgtttcc 16056  T
Q  208 ttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||| ||||||  |||| |||||||  ||  ||||| | |||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  16055 ttaaacaataaagagcgcacgtacaagtaggaatgaacccaggcacaccgaaccgtgccaggatgttggaacatcgtatccaacatcttacagagat 15959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 59; Significance: 5e-25; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 108 - 304
Target Start/End: Complemental strand, 7072 - 6877
Alignment:
Q  108 tattttctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttcc 207  Q
    ||||| |||||||||||| ||  |||||| |||||| || || |||||||||| |  |||||  ||| |||||||||||||| |||||||||| ||||||    
T  7072 tatttcctaaaatataaatactactttagaaatattccagaactgattttgtaaagctatgcccgttgcttggtcaataagaaaaggaaatattatttcc 6973  T
Q  208 ttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgcc-aggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||| ||||||  | ||||||||||| || |||||| | || ||||| ||||| |||| |||||||||||||||  ||||||| ||| |||| ||||    
T  6972 ttaaacaataaa--gggcgcgtacaaataggcatgaacccagacacactgaaccgtgccaaggatgttggaacatcatatccaaaatcttacaaagat 6877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 304
Target Start/End: Complemental strand, 17659 - 17463
Alignment:
Q  108 tattttctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttcc 207  Q
    ||||| |||||||||||| ||  |||||| |||||| || |  ||||| |||| | ||||||  |||| ||||| ||||||||||||||||||  |||||    
T  17659 tatttcctaaaatataaatactactttagaaatattccatagctgattctgtaaagatatgcgcgttagttggttaataagataaggaaatattgtttcc 17560  T
Q  208 ttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||| |||||| ||||| | |||||| |  ||||||   |||||||| ||||| ||  |||||||||||||||  |||| |||||| |||||||||    
T  17559 ttaaacaataaagggcgcacatacaaatatgcatgaactcaggcacactgaaccgtggtaggatgttggaacatcatatctaacatcttacagagat 17463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 304
Target Start/End: Complemental strand, 27053 - 26857
Alignment:
Q  108 tattttctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttcc 207  Q
    ||||| |||||||||||| ||  |||||| |||||| || |  ||||| |||| | ||||||  |||| ||||| ||||||||||||||||||  |||||    
T  27053 tatttcctaaaatataaatactactttagaaatattccatagctgattctgtaaagatatgcgcgttagttggttaataagataaggaaatattgtttcc 26954  T
Q  208 ttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||| |||||| ||||| | |||||| |  ||||||   |||||||| ||||| ||  |||||||||||||||  |||| |||||| |||||||||    
T  26953 ttaaacaataaagggcgcacatacaaatatgcatgaactcaggcacactgaaccgtggtaggatgttggaacatcatatctaacatcttacagagat 26857  T

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Target: scaffold0069 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 108 - 304
Target Start/End: Original strand, 9299 - 9495
Alignment:
Q  108 tattttctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttcc 207  Q
    ||||| ||||||||||||  |  |||||| |||||| ||||  |||||||||||| |||||| |||| ||||| |||||||||||||||||||  || ||    
T  9299 tatttcctaaaatataaaatctactttagaaatattccacagctgattttgtatagatatgcgtgttgcttggacaataagataaggaaatattgttccc 9398  T
Q  208 ttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||| ||||||  |||||   ||| | |  ||||||   |||||||| ||||| ||||| || ||||||||||||||||||||| | |||||||||    
T  9399 ttaaacaataaagagcgcgtacacatatatgcatgaactcaggcacactgaaccgtgccaagaagttggaacattgtatccaacaccttacagagat 9495  T

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Target: scaffold0088 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 164 - 303
Target Start/End: Original strand, 37271 - 37410
Alignment:
Q  164 atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccat 263  Q
    |||||| |||| |||| ||||||||||||||||||||  |||||||||| |||||| | ||||| |||||| || |  |||   |||||||| ||||| |    
T  37271 atatgcgtgttgcttgatcaataagataaggaaatattgtttccttaaacaataaaggacgcgcctacaaataggcgagaacttaggcacactgaaccgt 37370  T
Q  264 gccaggatgttggaacattgtatccaacatcgtacagaga 303  Q
    | ||||||||||||||||||||||||||||  ||||||||    
T  37371 gtcaggatgttggaacattgtatccaacattttacagaga 37410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 304
Target Start/End: Complemental strand, 8175 - 7917
Alignment:
Q  47 acaaatattgaaagtcataaaatgtaggaacatcttcaggaacgtctataatagatt-caagtattttctaaaatataaacacatctttaggaatattgc 145  Q
    |||||||| ||||||| |||||||| |||||||||| |||| ||||   ||   ||  ||| ||||| |||||||||||| ||  |||||| | |||| |    
T  8175 acaaatatggaaagtcctaaaatgtcggaacatctttaggatcgtccccaaccaataacaaatatttcctaaaatataaatactactttagaagtattcc 8076  T
Q  146 acaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaa 245  Q
    |||  ||||| | || | |||||   ||| |||||||||||||||||||||||||  |||||||||| ||||||  ||| ||||||||| || ||||||     
T  8075 acagctgattctataaagatatgtgcgttgcttggtcaataagataaggaaatattgtttccttaaacaataaagagcgggcgtacaaataggcatgaac 7976  T
Q  246 caaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    | |||||||| ||||  |||| ||||||| |||||| |||| ||||||| || ||||||    
T  7975 ccaggcacactgaacagtgccgggatgttcgaacatcgtatgcaacatcttatagagat 7917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 176 - 301
Target Start/End: Original strand, 88439 - 88564
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    ||||| ||||||||||||||| |||  || ||||||| ||||||  ||||||||||| | |  ||||||   |||||||| |||||||| ||||||||||    
T  88439 cttggacaataagataaggaactattgttcccttaaacaataaagagcgcgcgtacatatatgcatgaactcaggcacactgaaccatgtcaggatgttg 88538  T
Q  276 gaacattgtatccaacatcgtacaga 301  Q
    ||||||||||||||||||| ||||||    
T  88539 gaacattgtatccaacatcttacaga 88564  T

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Target: scaffold0129 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 176 - 303
Target Start/End: Original strand, 16198 - 16325
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||||||||||  |||||||||| |||||| || ||||||||||||||    |||   |||||||| ||||| |||||||||||||    
T  16198 cttgatcaataagttaaggaaatattgtttccttaaacaataaagggtgcgcgtacaaacagaagagaactcaggcacactgaaccgtgccaggatgttg 16297  T
Q  276 gaacattgtatccaacatcgtacagaga 303  Q
    |||||| |||||||||||| | ||||||    
T  16298 gaacatcgtatccaacatcttccagaga 16325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 304
Target Start/End: Complemental strand, 16860 - 16664
Alignment:
Q  108 tattttctaaaatataaacacatctttaggaatattgcacaattgattttgtatatatatgcatgttacttggtcaataagataaggaaatatgatttcc 207  Q
    ||||| ||||||||||||  |  |||||| |||||| |||   ||||| |||||| ||||||  |||  |||||||||||| ||||||| |||  |||||    
T  16860 tatttcctaaaatataaaatctactttagaaatattccaccgctgattctgtatagatatgcgcgttgtttggtcaataagttaaggaattattgtttcc 16761  T
Q  208 ttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtacagagat 304  Q
    ||||| |||||| ||| ||| |||||  |  |||||||  |||||||| |||||||| ||||||||| || ||| |||||||||||| |||| ||||    
T  16760 ttaaacaataaagggcacgcttacaagtatgcatgaaatcaggcacactgaaccatgtcaggatgttagatcatcgtatccaacatcttacaaagat 16664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 303
Target Start/End: Complemental strand, 1467 - 1340
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||||||||||  |||||||||| |||||| || |||||||||||||| |  |||   |||||||| ||||||||| |||||||||    
T  1467 cttgatcaataagttaaggaaatattgtttccttaaacaataaagggtgcgcgtacaaacaggcgagaactcaggcacactgaaccatgctaggatgttg 1368  T
Q  276 gaacattgtatccaacatcgtacagaga 303  Q
    || |||  ||||||||||| | ||||||    
T  1367 gagcatcatatccaacatcttccagaga 1340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 303
Target Start/End: Complemental strand, 25144 - 25017
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||| ||||||  ||||||||||||||||| |||||  |||||||||| |  |||   |||||||| ||||| |||||||||||||    
T  25144 cttgatcaataagttaagcaaatattgtttccttaaataataaagggcgcatgtacaaacaggcgagaacttaggcacactgaaccgtgccaggatgttg 25045  T
Q  276 gaacattgtatccaacatcgtacagaga 303  Q
    || ||| |||||||||||| | ||||||    
T  25044 gagcatcgtatccaacatcttccagaga 25017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 1829 - 1711
Alignment:
Q  181 tcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaaca 280  Q
    |||||||| |||||||||||  |||||||||| |||||| ||||||| |||||| || |  |||   |||||||| ||||| |||||| |||||||||||    
T  1829 tcaataagttaaggaaatattgtttccttaaacaataaagggcgcgcatacaaataggcgagaactcaggcacactgaaccgtgccagaatgttggaaca 1730  T
Q  281 ttgtatccaacatcgtaca 299  Q
    | |||||||||||| ||||    
T  1729 tcgtatccaacatcttaca 1711  T

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Target: scaffold0359 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 2583 - 2682
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttg 275  Q
    |||| |||||||| |||||||||||  |||||||||| |||||| |||| ||||||||||||||  |||   |||||||| ||||| ||||| |||||||    
T  2583 cttgatcaataagttaaggaaatattgtttccttaaacaataaagggcgtgcgtacaaacagtcgagaactcaggcacactgaaccgtgccaagatgttg 2682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 45367 - 45311
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    ||||| ||||||| ||||||||||| ||||||||||||| |||||||||||| ||||    
T  45367 aaacagggcacactgaaccatgccaagatgttggaacatcgtatccaacatcataca 45311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 5727 - 5778
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    ||||| ||||||| |||||||||||||||||||||||||  |||||||||||    
T  5727 aaacagggcacactgaaccatgccaggatgttggaacatcatatccaacatc 5778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 11982 - 12033
Alignment:
Q  243 aaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatc 294  Q
    ||||| ||||||| |||||||||||||||||||||||||  |||||||||||    
T  11982 aaacagggcacactgaaccatgccaggatgttggaacatcatatccaacatc 12033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 109770 - 109664
Alignment:
Q  131 ctttaggaatattgcacaattgattttgtatat-atatgcatgttacttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgt 229  Q
    |||||| |||||| ||||||||||| | || || ||||||  ||| |||| |||||||| ||||||||| |  |||||||||| |||||| |||||||||    
T  109770 ctttagaaatattccacaattgattct-tagatgatatgcgcgttgcttgatcaataagttaaggaaatcttgtttccttaaacaataaagggcgcgcgt 109672  T
Q  230 acaaacag 237  Q
    ||||||||    
T  109671 acaaacag 109664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 38044 - 38121
Alignment:
Q  222 gcgcgcgtacaaacagtcatgaaacaaggcacaccgaaccatgccaggatgttggaacattgtatccaacatcgtaca 299  Q
    |||||||||||| ||  ||| |||||||| ||||  |||  ||||||||||||||||||| |||||||||||| ||||    
T  38044 gcgcgcgtacaatcaagcataaaacaaggtacacttaactgtgccaggatgttggaacatcgtatccaacatcttaca 38121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 303
Target Start/End: Complemental strand, 47858 - 47730
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaaca-gtcatgaaacaaggcacaccgaaccatgccaggatgtt 274  Q
    |||| |||||||| |||||||||||  ||| |||||| || ||| ||||||||||||||||   |  |||   |||||||| ||||| ||||||||||||    
T  47858 cttgatcaataagttaaggaaatattgttttcttaaacaacaaagggcgcgcgtacaaacaccgcgagaactcaggcacactgaaccgtgccaggatgtt 47759  T
Q  275 ggaacattgtatccaacatcgtacagaga 303  Q
    |||  || |||||||||||| | ||||||    
T  47758 ggagtatcgtatccaacatcttccagaga 47730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 159764 - 159825
Alignment:
Q  176 cttggtcaataagataaggaaatatgatttccttaaataataaaaggcgcgcgtacaaacag 237  Q
    |||| |||||||| |||||||||||  |||||||||| |||||| || ||| ||||||||||    
T  159764 cttgatcaataagttaaggaaatattgtttccttaaacaataaagggtgcgtgtacaaacag 159825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 82
Target Start/End: Original strand, 11736 - 11780
Alignment:
Q  38 gaatcagagacaaatattgaaagtcataaaatgtaggaacatctt 82  Q
    |||||||  |||||||| ||||||| |||||||||||||||||||    
T  11736 gaatcagcaacaaatatggaaagtcctaaaatgtaggaacatctt 11780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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