View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20523_low_15 (Length: 277)
Name: NF20523_low_15
Description: NF20523
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20523_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 87 - 241
Target Start/End: Original strand, 31013241 - 31013396
Alignment:
| Q |
87 |
aatgcgactgatatagcctcatcgacagttagattgtgcatgagcctttatttaaaatccttcttaagaatttgtagttttgagtttctatttctatttt |
186 |
Q |
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| T |
31013241 |
aatgcgactgatatagcctcatcgacagttagattgtgcatgagcctttatttaaaatccttcttaagaatttgtagttttgagtttctatttctatttt |
31013340 |
T |
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| Q |
187 |
tggctttcctaatttggtgccaa-nnnnnnncccaattcctcctgcaactcctatg |
241 |
Q |
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| T |
31013341 |
tggctttcctaatttggtgccaattttttttcccaattcctcctgcaactcctatg |
31013396 |
T |
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