View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20524_low_10 (Length: 288)
Name: NF20524_low_10
Description: NF20524
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20524_low_10 |
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Alignment Details
Target: chr6 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 13 - 274
Target Start/End: Original strand, 34568466 - 34568727
Alignment:
| Q |
13 |
tgaatgaaaagtttgtgtgaaatttctctatatataggctttgaggcttaaagacaaggaaaaaaggtcccttttcaacttggctggcttattcagcata |
112 |
Q |
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| T |
34568466 |
tgaatgaaaagtttgtgtgaaatttctctatatataggctttgaggcttaaagacaaggaaaaaaggtcccttttcaacttggctggcttattcagcata |
34568565 |
T |
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| Q |
113 |
aataatgcataaaatgtatataatataaattattgattttgtagtgtaagcaaatcaaagctttaccttttaagctttaatttaatttaatttcacatag |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34568566 |
aataatgcataaaatgtatataatataaattattgattttgtagtgtaagcaaatcaaagctttaccttttaagctttaatttaatttaatttcacatag |
34568665 |
T |
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| Q |
213 |
tttatctgttgctacttgtgacaactgtgacagatccacacggaaattatatggtggttgtt |
274 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34568666 |
tttatctgttgctacttgtgacaactgtgacagatccacacggaaattatatggtggttgtt |
34568727 |
T |
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