View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20525_high_11 (Length: 353)

Name: NF20525_high_11
Description: NF20525
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20525_high_11
NF20525_high_11
[»] chr8 (33 HSPs)
chr8 (90-338)||(43213885-43214133)
chr8 (90-338)||(15034092-15034340)
chr8 (90-338)||(34367937-34368186)
chr8 (90-338)||(39603770-39604018)
chr8 (90-338)||(1055008-1055256)
chr8 (90-338)||(23019614-23019862)
chr8 (90-338)||(26661929-26662177)
chr8 (90-338)||(42482833-42483081)
chr8 (90-344)||(22817-23071)
chr8 (90-338)||(5301634-5301882)
chr8 (90-338)||(39832070-39832316)
chr8 (90-338)||(20858495-20858743)
chr8 (90-338)||(487060-487308)
chr8 (90-338)||(5679341-5679589)
chr8 (90-338)||(34819937-34820185)
chr8 (90-338)||(21176640-21176887)
chr8 (90-346)||(35554077-35554333)
chr8 (90-338)||(45132221-45132469)
chr8 (90-216)||(41247584-41247710)
chr8 (90-216)||(41247883-41248009)
chr8 (213-338)||(41243392-41243517)
chr8 (1-58)||(25345-25402)
chr8 (1-58)||(1052722-1052779)
chr8 (1-58)||(26659644-26659701)
chr8 (1-58)||(34371687-34371744)
chr8 (1-58)||(22510738-22510795)
chr8 (3-54)||(20857479-20857530)
chr8 (1-58)||(2416341-2416398)
chr8 (1-58)||(23022139-23022196)
chr8 (1-54)||(24249681-24249734)
chr8 (1-54)||(5677269-5677322)
chr8 (214-338)||(40076020-40076144)
chr8 (144-192)||(40076138-40076186)
[»] chr7 (35 HSPs)
chr7 (90-338)||(10521313-10521561)
chr7 (90-338)||(17837442-17837690)
chr7 (90-338)||(5538878-5539126)
chr7 (90-338)||(27451014-27451262)
chr7 (90-338)||(41883022-41883270)
chr7 (90-338)||(48405840-48406088)
chr7 (90-338)||(11632829-11633077)
chr7 (90-338)||(16679941-16680189)
chr7 (90-338)||(17654177-17654425)
chr7 (90-338)||(35607718-35607966)
chr7 (90-338)||(17460589-17460837)
chr7 (90-338)||(17592377-17592625)
chr7 (90-325)||(15071610-15071845)
chr7 (94-338)||(9368729-9368973)
chr7 (90-338)||(42505261-42505509)
chr7 (90-346)||(13322514-13322772)
chr7 (90-321)||(34741219-34741449)
chr7 (90-338)||(37342727-37342975)
chr7 (201-338)||(11630588-11630725)
chr7 (90-275)||(36980042-36980227)
chr7 (90-338)||(47670530-47670775)
chr7 (1-58)||(9371204-9371261)
chr7 (1-58)||(10175600-10175657)
chr7 (1-58)||(45257184-45257241)
chr7 (1-54)||(5541364-5541417)
chr7 (1-58)||(17465540-17465597)
chr7 (1-58)||(17587617-17587674)
chr7 (1-54)||(41734361-41734414)
chr7 (90-290)||(9492235-9492435)
chr7 (1-54)||(16674969-16675022)
chr7 (1-54)||(17649337-17649390)
chr7 (1-58)||(35610233-35610290)
chr7 (1-58)||(41880686-41880743)
chr7 (1-58)||(48403553-48403612)
chr7 (199-325)||(17748025-17748151)
[»] chr2 (33 HSPs)
chr2 (90-338)||(7189295-7189543)
chr2 (90-338)||(39949977-39950224)
chr2 (90-338)||(10826238-10826487)
chr2 (90-338)||(29398932-29399180)
chr2 (90-338)||(28471010-28471258)
chr2 (90-346)||(45430987-45431243)
chr2 (90-338)||(30494288-30494536)
chr2 (90-338)||(43981003-43981251)
chr2 (90-338)||(15833738-15833986)
chr2 (90-338)||(43537031-43537279)
chr2 (90-338)||(36653823-36654071)
chr2 (90-338)||(45292355-45292600)
chr2 (90-338)||(17422949-17423196)
chr2 (90-298)||(45284992-45285197)
chr2 (90-338)||(22680013-22680249)
chr2 (178-338)||(5354541-5354701)
chr2 (90-338)||(40538022-40538269)
chr2 (90-302)||(7416273-7416485)
chr2 (1-58)||(3940546-3940603)
chr2 (1-58)||(5352162-5352219)
chr2 (1-58)||(20938096-20938153)
chr2 (1-58)||(30496766-30496823)
chr2 (1-58)||(43539554-43539611)
chr2 (1-58)||(43978719-43978776)
chr2 (4-58)||(10828848-10828902)
chr2 (1-54)||(29401427-29401480)
chr2 (1-58)||(15831325-15831382)
chr2 (1-54)||(36656172-36656225)
chr2 (3-54)||(45284372-45284423)
chr2 (3-54)||(45290833-45290884)
chr2 (3-54)||(45291735-45291786)
chr2 (90-146)||(5354489-5354545)
chr2 (242-338)||(20067783-20067879)
[»] chr3 (45 HSPs)
chr3 (90-338)||(4005733-4005981)
chr3 (90-338)||(2272379-2272627)
chr3 (90-321)||(599357-599588)
chr3 (90-332)||(16645990-16646232)
chr3 (90-338)||(47071503-47071752)
chr3 (90-346)||(36129968-36130223)
chr3 (90-338)||(49141841-49142089)
chr3 (90-338)||(50478100-50478348)
chr3 (90-338)||(3495564-3495812)
chr3 (90-322)||(17565512-17565744)
chr3 (90-338)||(34047907-34048155)
chr3 (90-338)||(41614751-41614999)
chr3 (90-338)||(42901483-42901731)
chr3 (90-338)||(54388607-54388855)
chr3 (90-338)||(46698638-46698886)
chr3 (90-335)||(50214424-50214669)
chr3 (90-338)||(46401187-46401435)
chr3 (90-338)||(51807658-51807906)
chr3 (90-338)||(49266692-49266939)
chr3 (90-335)||(52388898-52389139)
chr3 (90-346)||(44232200-44232456)
chr3 (90-338)||(20353023-20353271)
chr3 (90-346)||(48565358-48565614)
chr3 (90-338)||(42759144-42759392)
chr3 (90-338)||(50758581-50758829)
chr3 (90-346)||(30253409-30253665)
chr3 (175-338)||(42805284-42805447)
chr3 (1-58)||(42904008-42904065)
chr3 (1-58)||(46389157-46389214)
chr3 (1-58)||(54386322-54386379)
chr3 (1-58)||(2274735-2274792)
chr3 (1-54)||(17567886-17567939)
chr3 (1-54)||(41612567-41612620)
chr3 (1-58)||(50480601-50480658)
chr3 (1-49)||(20350844-20350892)
chr3 (3-54)||(46701846-46701897)
chr3 (1-55)||(16611272-16611326)
chr3 (1-55)||(22047927-22047981)
chr3 (1-58)||(52391213-52391270)
chr3 (2-58)||(2967743-2967799)
chr3 (2-58)||(34045575-34045631)
chr3 (2-58)||(49144280-49144336)
chr3 (1-58)||(29009058-29009115)
chr3 (1-58)||(36127605-36127662)
chr3 (1-54)||(4172000-4172053)
[»] chr5 (19 HSPs)
chr5 (90-338)||(8980-9228)
chr5 (90-338)||(8577866-8578114)
chr5 (90-338)||(38408171-38408419)
chr5 (90-338)||(7759819-7760067)
chr5 (90-338)||(19038490-19038738)
chr5 (90-346)||(30707530-30707785)
chr5 (90-335)||(28879080-28879325)
chr5 (90-338)||(28239060-28239308)
chr5 (90-335)||(42937967-42938212)
chr5 (90-338)||(511930-512178)
chr5 (90-338)||(5199249-5199497)
chr5 (90-338)||(42538275-42538523)
chr5 (90-338)||(38970523-38970771)
chr5 (90-338)||(8699753-8700001)
chr5 (1-58)||(30705334-30705391)
chr5 (1-58)||(27673472-27673529)
chr5 (2-58)||(19040935-19040991)
chr5 (236-299)||(15939273-15939336)
chr5 (17-54)||(5197184-5197221)
[»] chr4 (46 HSPs)
chr4 (90-338)||(21018919-21019167)
chr4 (90-338)||(44677311-44677559)
chr4 (90-338)||(50277636-50277884)
chr4 (90-338)||(50195883-50196131)
chr4 (90-338)||(1306463-1306711)
chr4 (90-338)||(6179131-6179379)
chr4 (90-346)||(37016904-37017160)
chr4 (90-338)||(49092903-49093151)
chr4 (90-338)||(31424222-31424470)
chr4 (90-338)||(40355744-40355992)
chr4 (90-338)||(41796366-41796615)
chr4 (90-313)||(50903845-50904068)
chr4 (134-346)||(8109677-8109889)
chr4 (90-338)||(50021013-50021261)
chr4 (90-338)||(51685617-51685865)
chr4 (90-338)||(30724090-30724328)
chr4 (90-338)||(46438549-46438798)
chr4 (171-338)||(49168074-49168241)
chr4 (90-336)||(10730323-10730569)
chr4 (90-336)||(10944092-10944338)
chr4 (90-323)||(30706399-30706631)
chr4 (90-338)||(71418-71667)
chr4 (90-338)||(14317091-14317339)
chr4 (176-338)||(41931303-41931465)
chr4 (90-338)||(12891393-12891641)
chr4 (90-336)||(11081692-11081938)
chr4 (1-58)||(6181608-6181665)
chr4 (1-58)||(9893083-9893140)
chr4 (1-58)||(44679893-44679950)
chr4 (1-58)||(49090619-49090676)
chr4 (1-58)||(3185908-3185965)
chr4 (1-54)||(30704224-30704277)
chr4 (1-54)||(50023367-50023420)
chr4 (1-54)||(50030485-50030538)
chr4 (1-54)||(50193675-50193728)
chr4 (1-58)||(3184152-3184209)
chr4 (1-58)||(31421896-31421953)
chr4 (1-58)||(49165233-49165289)
chr4 (2-58)||(41800764-41800820)
chr4 (1-42)||(11051244-11051285)
chr4 (93-149)||(55279299-55279355)
chr4 (3-54)||(55280068-55280119)
chr4 (90-125)||(49168022-49168057)
chr4 (112-312)||(21535569-21535771)
chr4 (90-143)||(40887152-40887205)
chr4 (238-325)||(55279123-55279210)
[»] chr1 (32 HSPs)
chr1 (90-338)||(31780981-31781229)
chr1 (90-338)||(22526484-22526732)
chr1 (90-338)||(47504823-47505071)
chr1 (90-338)||(19158502-19158750)
chr1 (90-346)||(95408-95653)
chr1 (90-338)||(13637327-13637575)
chr1 (90-338)||(50341470-50341718)
chr1 (90-338)||(19522598-19522846)
chr1 (90-338)||(3729671-3729919)
chr1 (90-338)||(21143461-21143709)
chr1 (90-338)||(26878198-26878446)
chr1 (90-338)||(45828058-45828306)
chr1 (90-338)||(23273577-23273825)
chr1 (90-244)||(52804403-52804557)
chr1 (172-338)||(11196426-11196592)
chr1 (90-325)||(49855356-49855591)
chr1 (214-346)||(47660478-47660610)
chr1 (90-209)||(47658252-47658371)
chr1 (90-325)||(38120493-38120728)
chr1 (90-281)||(51325400-51325591)
chr1 (1-58)||(97767-97824)
chr1 (1-58)||(3732196-3732253)
chr1 (1-58)||(8473984-8474041)
chr1 (1-58)||(26875856-26875913)
chr1 (92-338)||(35256588-35256827)
chr1 (1-58)||(2365434-2365491)
chr1 (1-58)||(19156212-19156269)
chr1 (1-54)||(21141224-21141277)
chr1 (1-54)||(38127312-38127365)
chr1 (1-54)||(50343789-50343842)
chr1 (2-58)||(470364-470420)
chr1 (17-58)||(13639841-13639882)
[»] chr6 (21 HSPs)
chr6 (103-338)||(26439936-26440171)
chr6 (90-338)||(6203631-6203879)
chr6 (90-338)||(11690598-11690846)
chr6 (90-338)||(22303712-22303960)
chr6 (90-338)||(30826945-30827193)
chr6 (90-338)||(31770556-31770804)
chr6 (90-338)||(27638230-27638478)
chr6 (90-338)||(3383911-3384159)
chr6 (90-234)||(26172429-26172573)
chr6 (214-338)||(2406849-2406973)
chr6 (90-338)||(32642374-32642622)
chr6 (90-338)||(24086143-24086391)
chr6 (1-58)||(6201346-6201403)
chr6 (1-58)||(11688313-11688370)
chr6 (1-58)||(30829469-30829526)
chr6 (1-58)||(3501349-3501406)
chr6 (214-346)||(18005758-18005890)
chr6 (2-58)||(27616914-27616970)
chr6 (9-58)||(26423196-26423245)
chr6 (271-338)||(26172573-26172640)
chr6 (17-58)||(22301395-22301436)
[»] scaffold0155 (1 HSPs)
scaffold0155 (90-338)||(11831-12080)
[»] scaffold0877 (1 HSPs)
scaffold0877 (8-54)||(4477-4523)


Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 43213885 - 43214133
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  43213885 tgtttggtttgtgcaggcatggtttttggcgcattttcctgggatttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 43213984  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43213985 tggaagctccagaagggtcacggggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgctggaggccttacgaggagcaca 43214084  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||| ||||||||||||||||| |||||||||| ||||||||||||    
T  43214085 gggagatgcaggactttgaggaggttttctggtattctggctggattat 43214133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 15034340 - 15034092
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  15034340 tgtttggtttgtgcaggcatggtttttggcgcattttcctgggttttacagtgttgatcccaacactgactacgtggaaaactatccggttgcagcgagg 15034241  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| |||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  15034240 tggaagctccagaagggtcatggggaggggatcacgtattggtcactgcttgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 15034141  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  15034140 gagagatccaggacttcgaggaggttttctggtattctgggtggattat 15034092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 34368186 - 34367937
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| |||||| ||  |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  34368186 tgtttggtttgtgcagacatggtttttggcgcattttcttgttttttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 34368087  T
Q  190 tggaagctctagaagggtcacgaggaggggg-tcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcac 288  Q
    || |||||| |||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||  |||||     
T  34368086 tgaaagctccagaagggtcacggggaggggggtcacgtatcggtcgctgcttgatcgtatacagtttgatgacgtatgctggaggccttacgtagagcat 34367987  T
Q  289 aaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    | |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  34367986 agggagatccaggactttgaggaggttttctggtattctggctggattat 34367937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 39603770 - 39604018
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  39603770 tgtttggtttgtgcagacatggtttttggcgcattttcctggcttttatagtgttgatcccaacactgactacatggaaaactatccggttgtagcgagg 39603869  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||    
T  39603870 tggaagctccaaaagggtcacggggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgatgtatgctggaggccgtacgaagagcaca 39603969  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||||||||||| ||| |||| ||||| ||| ||||||||    
T  39603970 gggagatccaggactttgaggtggttttctcgtattctggatggattat 39604018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 1055008 - 1055256
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  1055008 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 1055107  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  1055108 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 1055207  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  1055208 gagagatccaggacttcgaggaggttttctggtattctggatggattat 1055256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 23019862 - 23019614
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  23019862 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 23019763  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  23019762 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 23019663  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  23019662 gagagatccaggacttcgaggaggttttctggtattctggatggattat 23019614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 26661929 - 26662177
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  26661929 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 26662028  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  26662029 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 26662128  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  26662129 gagagatccaggacttcgaggaggttttctggtattctggatggattat 26662177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 42483081 - 42482833
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  42483081 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 42482982  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||| ||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  42482981 tggaagctccagaagggtcatggggaggggatcaagtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 42482882  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
       ||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  42482881 gaaagatccaggacttcgaggaggttttctggtattctggatggattat 42482833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 90 - 344
Target Start/End: Complemental strand, 23071 - 22817
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| |||||||||| |||||||    
T  23071 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgtagcgagg 22972  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| | |||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  22971 tggaagctccataagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 22872  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattatctgtgg 344  Q
      |||||| ||||||| |||||||| |||||||||| ||| |||||||| |||||    
T  22871 gagagatctaggacttcgaggaggttttctggtattctggatggattatgtgtgg 22817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 5301882 - 5301634
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||| || ||||||||||| |||| |||||||||||||    
T  5301882 tgtttggtttgtgcaagcatggtttttggcgcgttttcctggcttttacagtgttgatcccaacaccgactacatggaaaactatctggttgcagcgagg 5301783  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||| |||||||    
T  5301782 tggaagcttcagaagggtcatggagagggggtcacgtatcggtcactgcttgatcgtattcagtttgatgacgtatgctggaggtcgtacgaagagcaca 5301683  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     | |||||||||| ||||||||||| ||||||||||   ||||||||||    
T  5301682 ggaagatccaggattttgaggaggttttctggtattcaagctggattat 5301634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 39832316 - 39832070
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  39832316 tgtttggtttgtgcaggcatggtttttggcgcattttcctggtttttccagtgttgatcccaacactgactacatggaaaactatccggttgcggcgagg 39832217  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
     |||||||  | |||||||| ||| |||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| ||||| |||||||    
T  39832216 cggaagcttcaaaagggtca-gag-agggggtcacatatcggtcactgtttgatcgtatacagttggatgacgtatgttggaggccgtacgaagagcaca 39832119  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| ||||||||||| || |||||||  |||||||||||    
T  39832118 gggagatccaggattttgaggaggttttgtggtattcaggctggattat 39832070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 20858495 - 20858743
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| ||||||||||| ||| |||||||||| || ||||||||||||||||||||  | ||||||||||| ||||| |||||  |||||    
T  20858495 tgtttggtttgtgcaagcatggtttttagcgcattttcctggcttatacagtgttgatcccaacaccaactacatggaaaactatccagttgcgacgagg 20858594  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    |||||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||| ||||| |    
T  20858595 tggaagctttagaagggtcatggagagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgctggaggctgtacgaagagcata 20858694  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||| | ||||||||||| ||||||||||  |||||||||||    
T  20858695 gggagatccagaattttgaggaggttttctggtattcaggctggattat 20858743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 487308 - 487060
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||| | ||| ||||||| ||||||||||||||||||    
T  487308 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactaactacctggaaaactatccggttgcagcgagg 487209  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||||||| |||||||||| |||  || |  |||| |||||||| |||||||||||||    
T  487208 tggaagctccaaaagggtcatggggaggggatcacttatcggtcactgctcgatcgtatactgttaaataatttatgctggaggccgtacgaggagcaca 487109  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    | ||||| |||||||| |||||||| | |||||||| ||| ||||||||    
T  487108 aagagattcaggacttcgaggaggtttcctggtattctggatggattat 487060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 5679341 - 5679589
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||| ||||||||||||||||| |||||| ||| |||| |||||||||||| |||||| | || || ||||| ||||||||||| ||||||    
T  5679341 tgtttggtttgtgtaggcatggtttttggcgcattttcatggctttttcagtgttgatccaaacactaactatattgaaaactatccggttgcggcgagg 5679440  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  | |||||||| |  || ||||| |||||||| ||| | |||||||||||  |||||||| ||||||||||||||| |||||| |||||||    
T  5679441 tggaagctacataagggtcatggagatggggtgacgtatcgctcatttcttgatcgtattgagtttgataacgtatgttggaggctttacgaagagcaca 5679540  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||| ||||  ||||||||||| ||||||||||  |||||||||||    
T  5679541 tggagattcagggttttgaggaggttttctggtattcaggctggattat 5679589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 34820185 - 34819937
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||| || ||||||||||| || ||||| |||| ||||||||||||||||||||||| || ||  || |||| |||| ||||||  |||||    
T  34820185 tgtttggtttgtgtagacatggtttttgacgcatttttctggcttttacagtgttgatcccaacaccgactatttgaaaaactatctggttgcgacgagg 34820086  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  |||||||| |||||||| ||| ||||||||||||| ||||||||||||||||| |||||  | ||||| ||||||     
T  34820085 tggaagctacagaagggtcatggagagggggtgacgtatcgctcattgcttgatcgtattcagtttgatgacgtatgctggagttcgtacgaagagcact 34819986  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    |||||||||| || ||||||||||| ||||||||||  |||||||||||    
T  34819985 aggagatccaagattttgaggaggttttctggtattcaggctggattat 34819937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 21176887 - 21176640
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||| |||  ||||||||| |||| |||||||||||  ||||| || || || ||||| ||||||||||| ||||||    
T  21176887 tgtttggtttgtgcaggcatgattttttgcgctttttcctggctttttcagtgttgatca-aacaccgactatattgaaaactatccggttgcggcgagg 21176789  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  |||||||  |||||||| ||| |||||||||||||  |||||||| ||||||| |||||| | ||| | |||||||    
T  21176788 tggaagctacagaagggtcatggagagggggcgacgtatcgctcattgcttgatcgtatttagtttgataacgtatgatggaggtcgtacaaagagcaca 21176689  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||  ||||||||||| ||||||||||  |||||||||||    
T  21176688 gggagatccagggttttgaggaggttttctggtattcaggctggattat 21176640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 90 - 346
Target Start/End: Original strand, 35554077 - 35554333
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||| ||||||||||||||||||||||| ||||||||||||  ||| |||||||||||||||||| || || || ||||| || ||| |||| ||||||    
T  35554077 tgttttgtttgtgcaggcatggtttttggtgtattttcctggccttttcagtgttgatcccaacaccgactatattgaaaactacccgtttgcggcgagg 35554176  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |   | ||| | |||||| | ||| ||||||||| ||| ||||||||||||||||| |||||||| ||||| |||||||    
T  35554177 tggaagctacagaagggtcatggacaagggttgacgtattgctcattgcttgatcatattcagtttgatgacgtatgctggaggccgtacgaagagcaca 35554276  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattatctgtggtg 346  Q
     |||||||||||  ||| ||||| | |||||||||   ||||||||||| |||||||    
T  35554277 tggagatccagggttttaaggagatattctggtatccaggctggattatttgtggtg 35554333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 45132221 - 45132469
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||| ||||||||  ||||| | |||||||||| ||||| || || || ||||| | ||||||||| | ||||    
T  45132221 tgtttggtttgtgcaggcatgatttttggcgcattttcctaagtttttcggtgttgatccaaacaccgactatattgaaaactttccggttgcggtgagg 45132320  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    | ||||||  |||||||||| |  |||||||| |||||||| ||| ||||||| ||||| ||||||||||||||||| |||||| | ||||| |||||||    
T  45132321 tagaagctacagaagggtcatggagagggggtgacgtatcgctcattgcttgaccgtattcagtttgatgacgtatgctggaggtcgtacgaagagcaca 45132420  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    ||||||||||    ||||||||||| || |||||||  || ||||||||    
T  45132421 aggagatccaaccttttgaggaggttttttggtattcaggatggattat 45132469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 90 - 216
Target Start/End: Complemental strand, 41247710 - 41247584
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| || | ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  41247710 tgtttggtttgtgcagacaagatttttggcgcattttcctggcttttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 41247611  T
Q  190 tggaagctctagaagggtcacgaggag 216  Q
    ||||||||  | |||||||||| ||||    
T  41247610 tggaagcttcataagggtcacggggag 41247584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 90 - 216
Target Start/End: Original strand, 41247883 - 41248009
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| || | ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  41247883 tgtttggtttgtgcagacaagatttttggcgcattttcctggcttttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 41247982  T
Q  190 tggaagctctagaagggtcacgaggag 216  Q
    ||||||||  | |||||||||| ||||    
T  41247983 tggaagcttcataagggtcacggggag 41248009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 213 - 338
Target Start/End: Complemental strand, 41243517 - 41243392
Alignment:
Q  213 ggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaaggagatccaggactttgaggag 312  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||| | ||||||| ||||||||| ||||||||||||    
T  41243517 ggagggggtcacgtatcagtcactgcttgatcgtatacagtttgatgacgtatgctggaggccgtacaaagagcacagggagatccatgactttgaggag 41243418  T
Q  313 gtcttctggtattttggctggattat 338  Q
     | || ||||||| ||||||||||||    
T  41243417 attttatggtattctggctggattat 41243392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25402 - 25345
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25402 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 25345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 1052722 - 1052779
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1052722 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 1052779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26659644 - 26659701
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26659644 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 26659701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34371744 - 34371687
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  34371744 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 34371687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 22510738 - 22510795
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  22510738 ccatttaatcacaagtaagtatcttgactcatttttaatcataacgttagtttgggta 22510795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 20857479 - 20857530
Alignment:
Q  3 atttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20857479 atttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttg 20857530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2416341 - 2416398
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  2416341 ccatttaatcacaagtaagtatcttgactcattgtttatcataatgttagtttgggta 2416398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 23022196 - 23022139
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||    
T  23022196 ccatttaatcacaagtaagtattttgattcatttttaatcataatgttagtttgggta 23022139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 24249681 - 24249734
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  24249681 ccatttaatcacaagtaagtaccttgactcatttttaatcatgatgttagtttg 24249734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5677269 - 5677322
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||| ||||||||||| ||||| ||||||||||||||||||||| ||||    
T  5677269 ccatttaattacaagtaagtaccttgattcatttttaatcataatgttagtttg 5677322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 338
Target Start/End: Complemental strand, 40076144 - 40076020
Alignment:
Q  214 gagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaaggagatccaggactttgaggagg 313  Q
    |||| ||| |||||||| ||| ||||||||||||| |||||||||||| |||| || ||| | ||| |  |||||| | | ||||| || |||||||||     
T  40076144 gaggtggtgacgtatcgctcattgcttgatcgtattcagtttgatgacttatgctgaaggtcgtacaaaaagcacaggaaaatccaagattttgaggaga 40076045  T
Q  314 tcttctggtattttggctggattat 338  Q
    | |||| |||||  |||||||||||    
T  40076044 ttttctagtattcaggctggattat 40076020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 40076186 - 40076138
Alignment:
Q  144 tgatcccaacactgattacatggaaaattatccggttgcagcgaggtgg 192  Q
    |||||||||||| || || |||||||| ||||||||||| |||||||||    
T  40076186 tgatcccaacaccgactatatggaaaactatccggttgcggcgaggtgg 40076138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 10521313 - 10521561
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  10521313 tgtttggtttgtgcaggcatggtttttggcgcatttttctgggttttacagtgttgatcccaacactgactacatggaaaactatctggttgcagcgagg 10521412  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10521413 tggaagctccagaagggtcacggggagggggtcacgtatcggtcactgcttgatcttatacagtttgatgacgtatgttggaggccttacgaggagcaca 10521512  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||| || |||||||||||||| |||||||||| ||||||||||||    
T  10521513 tggagatgcatgactttgaggaggttttctggtattctggctggattat 10521561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 17837442 - 17837690
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  17837442 tgtttggtttgtgcaggcatggtttttggcgcattttcctggattttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 17837541  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| |    
T  17837542 tggaagctccagaagggtcacggggaggggatcacgtatcggtcactgcttgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcata 17837641  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||||||||||||    
T  17837642 gagagatccaggacttcgaggaggttttctggtattctggctggattat 17837690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 5539126 - 5538878
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||  |||||||||||||| ||||||||||  ||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  5539126 tgtttggtttgtgcaaacatggtttttggcgcattttcctggcctttacagtgttgatcccaacactgactacatggaaaactatctggttgcagcgagg 5539027  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  ||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  5539026 tggaagcttcagaagggtcacggagagggggtcacatatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccgtacgaagagcaca 5538927  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| ||||||||||| |||||||||| ||| ||||||||    
T  5538926 gggagatccaggattttgaggaggttttctggtattctggttggattat 5538878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 27451262 - 27451014
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||    
T  27451262 tgtttggtttgtgcaggcatgatttttggcgcattttcctggcttttacagtgttgatcccaacactgactacatggaaaactatccagttgcggcgagg 27451163  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    |||||||| ||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  27451162 tggaagctttagaagggtcacagagagggggtcacatatcggtcactgcttgatcgtatacagtttgatgacgtatgctggaggccgtacgaagagcaca 27451063  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| ||||||||||| ||||||||||  |||||||||||    
T  27451062 gggagatccaggattttgaggaggttttctggtattcaggctggattat 27451014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 41883022 - 41883270
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  41883022 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 41883121  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  41883122 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 41883221  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  41883222 gagagatccaggacttcgaggaggttttctggtattctggatggattat 41883270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 48405840 - 48406088
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  48405840 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 48405939  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  48405940 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 48406039  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  48406040 gagagatccaggacttcgaggaggttttctggtattctggatggattat 48406088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 11633077 - 11632829
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||| |||||  || ||||||||||| ||||||||||||||||||    
T  11633077 tgtttggtttgtgcagacatggtttttggcgcattttcatggcttttacagtgttgatcacaacatcgactacatggaaaactatccggttgcagcgagg 11632978  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    || ||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| |||||||    
T  11632977 tgaaagctttagaagggtcatgaagagggggtcacatatcggtcactgcttgatcgtattcagtttgatgacgtatgttggaggtcgtacgaagagcaca 11632878  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| ||||||||||| ||||||||||  |||||||||||    
T  11632877 gggagatccaggattttgaggaggttttctggtattcaggctggattat 11632829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 16679941 - 16680189
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||||| || |||||||| ||||||    
T  16679941 tgtttggtttgtgcaggcatgatttttggcgcattttcctggcttttacagtgttgatcccaacaccgactacatggaaaactagccggttgcggcgagg 16680040  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  16680041 tggaagcttcagaagggtcatggagagggggtcacatatcggtcactgcttgatcgtatacagtttgatgacgtatgctggaggccgtacgaagagcaca 16680140  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| ||| ||||||| || |||||||  |||||||||||    
T  16680141 gggagatccaggatttttaggaggttttatggtattcaggctggattat 16680189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 17654177 - 17654425
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||||| || |||||||| ||||||    
T  17654177 tgtttggtttgtgcaggcatgatttttggcgcattttcctggcttttacagtgttgatcccaacaccgactacatggaaaactagccggttgcggcgagg 17654276  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  17654277 tggaagcttcagaagggtcatggagagggggtcacatatcggtcactgcttgatcgtatacagtttgatgacgtatgctggaggccgtacgaagagcaca 17654376  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| ||| ||||||| || |||||||  |||||||||||    
T  17654377 gggagatccaggatttttaggaggttttatggtattcaggctggattat 17654425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 35607966 - 35607718
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||| ||||||||||||||    
T  35607966 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactattcggttgcagcgagg 35607867  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||||||| | |||||||||||||    
T  35607866 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgttggaggtcgtacgaggagcaca 35607767  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| | | ||||||||    
T  35607766 gagagatccaggacttcgaggaggttttctggtattctagatggattat 35607718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 17460837 - 17460589
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  17460837 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 17460738  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| ||| || | |||||||||||||    
T  17460737 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggcggtcgtacgaggagcaca 17460638  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| | | ||||||||    
T  17460637 gagagatccaggacttcgaggaggttttctggtattcttgatggattat 17460589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 17592377 - 17592625
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  17592377 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 17592476  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| ||| || | |||||||||||||    
T  17592477 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggcggtcgtacgaggagcaca 17592576  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| | | ||||||||    
T  17592577 gagagatccaggacttcgaggaggttttctggtattcttgatggattat 17592625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 90 - 325
Target Start/End: Complemental strand, 15071845 - 15071610
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||| ||||||| || |||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  15071845 tgtttggtttgtgcaggcatgatttttggcgcattttccaggatttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 15071746  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| ||||||||||| |    
T  15071745 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcata 15071646  T
Q  290 aggagatccaggactttgaggaggtcttctggtatt 325  Q
      |||||||||||||| |||||||| ||||||||||    
T  15071645 gagagatccaggacttcgaggaggttttctggtatt 15071610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 94 - 338
Target Start/End: Complemental strand, 9368973 - 9368729
Alignment:
Q  94 tggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgaggtgga 193  Q
    |||||||||||| |||||||||||  | ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||||||    
T  9368973 tggtttgtgcagacatggtttttgaagcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgaggtgga 9368874  T
Q  194 agctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaagga 293  Q
    ||||| |||||||||| | ||||||| |||| |||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||  ||    
T  9368873 agctcgagaagggtcatggggaggggatcacatatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcacagaga 9368774  T
Q  294 gatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    |||||||||||| |||||||| |||||||||| ||| ||||||||    
T  9368773 gatccaggacttcgaggaggttttctggtattctggatggattat 9368729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 42505509 - 42505261
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  42505509 tgtttggtttgtgcagacatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 42505410  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    |||||||||  ||||||||| | ||||||| |||||||| |||||||||| |||||||||||||| ||||| ||||| | || ||| ||| |||||||||    
T  42505409 tggaagctcccgaagggtcatggggaggggatcacgtattggtcactgctcgatcgtatacagttagatgatgtatgctagaagccgtacaaggagcaca 42505310  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  42505309 gagagatccaggacttcgaggaggttttctggtattctggatggattat 42505261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 90 - 346
Target Start/End: Original strand, 13322514 - 13322772
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||    
T  13322514 tgtttagtttgtgcaggcatggtttttggcgcattttcctggcttttacagtgttgatcccaacactaactacatggaaaactatccggttgcagcgagg 13322613  T
Q  190 tggaagctctagaa--gggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagca 287  Q
    ||||||||  ||||  ||||||||  || |||||||||||| ||||||| ||||||||||||||||||||||||||||  | | |||  ||||||||| |    
T  13322614 tggaagcttcagaaaggggtcacggagatggggtcacgtattggtcactacttgatcgtatacagtttgatgacgtatcataggggctatacgaggagaa 13322713  T
Q  288 caaggagatccaggactttgaggaggtcttctggtattttggctggattatctgtggtg 346  Q
     |  ||||||||||| ||||||||||| || ||||||| ||||||||| || |||||||    
T  13322714 tagagagatccaggattttgaggaggttttatggtattctggctggataatgtgtggtg 13322772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 90 - 321
Target Start/End: Original strand, 34741219 - 34741449
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| ||||||||||||||  |||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  34741219 tgtttggtttgtgcatgcatggtttttggcacattttcctggcttttacattgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 34741318  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||| |||||||  || ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| | ||| | |||||||    
T  34741319 tggaagcttcagaa-ggtcacggagatggggtcacgtatcagtcactgcttgatcgtatacagtttgatgacgtatgctggaggtcgtacaaagagcaca 34741417  T
Q  290 aggagatccaggactttgaggaggtcttctgg 321  Q
       ||||||| || ||||||||||| ||||||    
T  34741418 gaaagatccatgattttgaggaggttttctgg 34741449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 37342727 - 37342975
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||| ||||||||||||||||  |||||||   ||||| |||||||||||| ||||| || ||  | ||||| | ||||||||| |||||     
T  37342727 tgtttggtttgtgtaggcatggtttttggcccattttccgaagtttttcagtgttgatccaaacaccgactatgttgaaaactttccggttgcggcgaga 37342826  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    |||||||| ||||||||||| |  |||||| | | |||||| ||| ||||||||||||| |||||||||||||||||||||||| | ||||| |||||||    
T  37342827 tggaagctatagaagggtcatggagaggggttgatgtatcgctcattgcttgatcgtattcagtttgatgacgtatgttggaggtcgtacgaagagcaca 37342926  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     | |||||||||  ||||||||| | ||||||||||  |||||||||||    
T  37342927 ggaagatccagggttttgaggagatattctggtattcaggctggattat 37342975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 201 - 338
Target Start/End: Complemental strand, 11630725 - 11630588
Alignment:
Q  201 gaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaaggagatccag 300  Q
    |||| |||| || ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | ||||| ||||||| ||||||||||    
T  11630725 gaagagtcatgaagagggggtcacatatcggtcactgcttgatcgtattcagtttgatgacgtatgttggaggtcgtacgaagagcacagggagatccag 11630626  T
Q  301 gactttgaggaggtcttctggtattttggctggattat 338  Q
    || ||||||||||| ||||||||||  |||||||||||    
T  11630625 gattttgaggaggttttctggtattcaggctggattat 11630588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 90 - 275
Target Start/End: Original strand, 36980042 - 36980227
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||| ||||||||||||||||| | ||||||  ||||||   ||||||||| |||||  | ||  | ||||| |  ||||| || ||||||    
T  36980042 tgtttggtttgtgtaggcatggtttttggcgcactttcctaagttttatgttgttgatccaaacaccaagtatgttgaaaacttaccggtagcggcgagg 36980141  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggcc 275  Q
    ||||||||  |||||||||| |  ||||||||||| ||||||||| |||||||||||||   ||||||||| ||||| ||||||||    
T  36980142 tggaagcttcagaagggtcatggagagggggtcacttatcggtcagtgcttgatcgtattacgtttgatgatgtatgctggaggcc 36980227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 47670775 - 47670530
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||  |||||||||||||| | ||||||  ||||||   ||||||||| |||||  | ||  | ||||| |  |||||||| ||||||    
T  47670775 tgtttggtttgtgcacacatggtttttggcgcactttcctaagttttatgttgttgatccaaacaccaagtatgttgaaaacttaccggttgcggcgagg 47670676  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
     |||||||  | ||||||||    ||||||||| |||||||||   |||||||| ||||   ||| |||||||||||||||||||| ||| | |||||||    
T  47670675 aggaagcttcataagggtcatatagagggggtcgcgtatcggt---tgcttgattgtattatgttcgatgacgtatgttggaggccgtacaaagagcaca 47670579  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||  ||||||  ||||||||||| ||||||||||  |||||||||||    
T  47670578 gggacttccaggcttttgaggaggtattctggtattcaggctggattat 47670530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9371261 - 9371204
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9371261 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 9371204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10175657 - 10175600
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10175657 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 10175600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 45257184 - 45257241
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45257184 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 45257241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 5541417 - 5541364
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5541417 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttg 5541364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17465597 - 17465540
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  17465597 ccatttaatcacaagtaagtatcttgactcattttttatcataatgttagtttgggta 17465540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17587617 - 17587674
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  17587617 ccatttaatcacaagtaagtatcttgactcattttttatcataatgttagtttgggta 17587674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41734361 - 41734414
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41734361 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttg 41734414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 90 - 290
Target Start/End: Complemental strand, 9492435 - 9492235
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| ||||||||||||||| | ||||||  ||||||   ||||||||| |||||  | ||  | ||||| |  |||||||  ||||||    
T  9492435 tgtttggtttgtgcatgcatggtttttggcgcactttcctaagttttatgttgttgatccaaacaccaagtatgttgaaaacttaccggttgtggcgagg 9492336  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  | |||  ||| |  |||||||||| ||||||| || |||||||||||||    |||||||||| |||||||||||| ||||| |||||||    
T  9492335 tggaagcttcaaaagtttcatggagagggggtcatgtatcggccattgcttgatcgtattacctttgatgacggatgttggaggccgtacgaagagcaca 9492236  T
Q  290 a 290  Q
    |    
T  9492235 a 9492235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16674969 - 16675022
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  16674969 ccatttaatcacaagtaagtatcttgacttatttttaatcataatgttagtttg 16675022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 17649337 - 17649390
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  17649337 ccatttaatcacaagtaagtatcttgacttatttttaatcataatgttagtttg 17649390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 35610290 - 35610233
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||    
T  35610290 ccatttaatcacaagtaagtatcttgaatcatttttagtcataatgttagtttgggta 35610233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 41880686 - 41880743
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  41880686 ccatttaatcacaagtaagtatcttgactcattgtttatcataatgttagtttgggta 41880743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 48403553 - 48403612
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactca--tttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||||||||||||||  ||||| |||||||||||| ||||||||    
T  48403553 ccatttaatcacaagtaagtatcttgactcattttttttatcataatgttagtttgggta 48403612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 325
Target Start/End: Complemental strand, 17748151 - 17748025
Alignment:
Q  199 tagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaaggagatcc 298  Q
    ||||||||||| || |||||||| |||||||| ||| | |||||| |  |   ||||||||||||    | |||||| ||||| ||||||| ||||||||    
T  17748151 tagaagggtcatgaagagggggtgacgtatcgctcatttcttgatagattggggtttgatgacgttacctagaggccgtacgaagagcacagggagatcc 17748052  T
Q  299 aggactttgaggaggtcttctggtatt 325  Q
    |||| ||||||||| | ||||||||||    
T  17748051 aggattttgaggagattttctggtatt 17748025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 7189295 - 7189543
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||    
T  7189295 tgtttggtttgtgcatgcatggtttttggcgcattttcctgggttttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcaagg 7189394  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  7189395 tggaagctccagaagggtcacggggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgctgaaggccttacgaggagcaca 7189494  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||||||||| ||||| |||||||||| || |||||||||    
T  7189495 tggagatccaggactttgaagaggttttctggtattctgactggattat 7189543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 39949977 - 39950224
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  39949977 tgtttggtttgtgcagacatggtttttggcgcattttcctgg-ttttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 39950075  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||||| ||| |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  39950076 tggaagctccagaagggtcacggggaaggggtcacatatcggtcactgcttgatcgtatacaatttgatgacgtatgctggaggccttacgaggagcaca 39950175  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  39950176 gggagatccaggactttgaggaggttttctggtattctggctggattat 39950224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 10826487 - 10826238
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10826487 tgtttggtttgtgcaggcatggtttttggcgcattttcctggtttttacagtgttgatcccaacactgactacatggaaaattatccggttgcagcgagg 10826388  T
Q  190 tggaagctctagaagggtcacgagga-gggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcac 288  Q
    ||||||||   |||| |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  10826387 tggaagcttcggaagtgtcacggggaggggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggcgttacgaagagcac 10826288  T
Q  289 aaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    | ||||||||| |||||||| ||||| |||||||||| ||||||||||||    
T  10826287 agggagatccaagactttgatgaggttttctggtattctggctggattat 10826238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 29399180 - 29398932
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| ||||| |||| | || |||||||||| |||||||||||||||||||||||||| || |||||||| ||||||||||||||||||    
T  29399180 tgtttggtttgtgcatgcatgattttggacgcattttcctggcttttacagtgttgatcccaacactgactatatggaaaactatccggttgcagcgagg 29399081  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  29399080 tggaagcttcagaatggtcacggggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgctggaggccgtacgaagagcaca 29398981  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  29398980 gggagatccaggactttgaggaggttttctggtattctggctggattat 29398932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 28471010 - 28471258
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  28471010 tgtttggtttgggcagacatggtttttggcgtattttccagggttttacagtgttgatcccaacactgactacgtggaaaactatccggttgcagcgagg 28471109  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  28471110 tggaagctcaagaagggtcatggggaggggatcacgtatcggtcactgcttgatcgtatacagttagatgatgtatgttggaggccgtacgaggagcaca 28471209  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| || ||||||| ||| ||||||||    
T  28471210 gagagatccaggacttcgaggaggttttttggtattctgggtggattat 28471258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 90 - 346
Target Start/End: Original strand, 45430987 - 45431243
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||| | | ||||||| ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  45430987 tgtttggtttgtgcaggcatggttttttgtgcattttccagggttttacagtgttgatcccaacactgactacgtggaaaactatccggttgcagcgagg 45431086  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||   |||||||||||||    
T  45431087 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgcttgatcgtatacagttagatgatgtatgctggaggttgtacgaggagcaca 45431186  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattatctgtggtg 346  Q
      |||||||||||||| |||||||| |||||||||| |||||||||||| |||||||    
T  45431187 gagagatccaggacttcgaggaggttttctggtattctggctggattatgtgtggtg 45431243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 30494536 - 30494288
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  30494536 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 30494437  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  30494436 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 30494337  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  30494336 gagagatccaggacttcgaggaggttttctggtattctggatggattat 30494288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 43981003 - 43981251
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  43981003 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 43981102  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  43981103 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 43981202  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||| ||||| |||||||| |||||||||| ||| ||||||||    
T  43981203 gagagatccaagacttcgaggaggttttctggtattctggatggattat 43981251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 15833738 - 15833986
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  15833738 tgtttggtttgtgcaggcatgatttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 15833837  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| | |||||||| | ||||||| ||||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||| |||||||||||||    
T  15833838 tggaagctccataagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatgcagttagatgatgtatgctggaggccgtacgaggagcaca 15833937  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  15833938 gagagatccaggacttcgaggaggttttctggtattctggatggattat 15833986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 43537279 - 43537031
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| |||| |||| ||| ||||||| ||||||||||||||||||    
T  43537279 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacgctgactacctggaaaactatccggttgcagcgagg 43537180  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    || |||||| |||||||||| | ||||||| ||||||||| ||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  43537179 tgaaagctccagaagggtcatggggaggggatcacgtatcagtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 43537080  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  43537079 gagagatccaggacttcgaggaggttttctggtattctggatggattat 43537031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 36654071 - 36653823
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||| ||| |||||||||| |||||||||||| ||||||||| |||  | |||||||| ||||||||||| ||||||    
T  36654071 tgtttggtttgtgcagacatggtttttcgcgcattttcctggcttttacagtgttaatcccaacattgaccatatggaaaactatccggttgcggcgagg 36653972  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||    
T  36653971 tggaagcttcagaagggtcacggagagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggtcgtacgaagagcaca 36653872  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     ||||||||| || ||||||||||| || |||||||  || ||||||||    
T  36653871 gggagatccatgattttgaggaggttttttggtattcaggttggattat 36653823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 45292355 - 45292600
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||  || ||||||||||| |||| |||||| ||||||    
T  45292355 tgtttggtttgtgcagacatggtttttggcgcattttcttggcttttacagtgttgatcccaacatcgactacatggaaaactatctggttgcggcgagg 45292454  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||| |   ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  45292455 tggaatc---agaagggtcacggagagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgctggaggccgtacgaagagcaca 45292551  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||| ||| ||||||||||| |||| |||||  |||||||||||    
T  45292552 gggagatccgggattttgaggaggttttctagtattcaggctggattat 45292600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 17422949 - 17423196
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||| |||||||||||||||||||||||| ||||||| || ||||  |||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  17422949 tgtttgctttgtgcaggcatggtttttggcgcattttccaggtttttt-agtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 17423047  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| |||||  |||| |||||||| |||||||||||||    
T  17423048 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatatatgctggaggccgtacgaggagcaca 17423147  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  17423148 gagagatccaggacttcgaggaggttttctggtattctggatggattat 17423196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 90 - 298
Target Start/End: Original strand, 45284992 - 45285197
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||  || ||||||||||| |||| |||||| ||||||    
T  45284992 tgtttggtttgtgcagacatggtttttggcgcattttcttggcttttacagtgttgatcccaacatcgactacatggaaaactatctggttgcggcgagg 45285091  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||| |   ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  45285092 tggaatc---agaagggtcacggagagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgctggaggccgtacgaagagcaca 45285188  T
Q  290 aggagatcc 298  Q
     ||||||||    
T  45285189 gggagatcc 45285197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 22680013 - 22680249
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||| ||||||| |||||||||| |||||||    
T  22680013 tgtttggtttgtgcaggcatggtttttggcgcatttttcagggttttacagtgttgatcccaacactgactacgtggaaaactatccggttgtagcgagg 22680112  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||            |||||| | ||||||| |||||||||||||||| ||||||||||||||||| ||||| ||||| ||| |||| |||||||||||||    
T  22680113 tg------------gggtcatggggaggggatcacgtatcggtcactacttgatcgtatacagttagatgatgtatgctgggggccgtacgaggagcaca 22680200  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  22680201 gagagatccaggacttcgaggaggttttctggtattctggttggattat 22680249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 178 - 338
Target Start/End: Original strand, 5354541 - 5354701
Alignment:
Q  178 gttgcagcgaggtggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggcctt 277  Q
    |||| |||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||| ||||||||| |||| ||||| ||||| |||||||| |    
T  5354541 gttgaagcgaggtggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatatagttagatgatgtatgctggaggccgt 5354640  T
Q  278 acgaggagcacaaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    |||||||||| |  |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  5354641 acgaggagcatagagagatccaggacttcgaggaggttttctggtattctggatggattat 5354701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 40538022 - 40538269
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| ||||||||||||||||| ||||||  ||||||   ||||||||| |||||| | ||    ||||| |  | |||||| ||||||    
T  40538022 tgtttggtttgtgcatgcatggtttttggcgtactttcctaagttttatgttgttgatccaaacactaagtatgctgaaaacttacaggttgcggcgagg 40538121  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||| ||| |  ||||||||||| ||| ||||| |||||||| ||||   ||||||||||||||| |||||||| ||||| |||||||    
T  40538122 tggaagcttcagaagg-tcatggagagggggtcacatataggtcattgcttgattgtattacgtttgatgacgtatgctggaggccgtacgaagagcaca 40538220  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||  ||||||  || |||||||| || |||||||  |||||||||||    
T  40538221 gggacttccaggctttcgaggaggtattttggtattcaggctggattat 40538269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 90 - 302
Target Start/End: Original strand, 7416273 - 7416485
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| | ||||||||||| | | ||||||  ||||||   ||||||||| |||||  | ||  | ||||| |  |||||||| |||| |    
T  7416273 tgtttggtttgtgcaagtatggtttttggtgcactttcctaagttttatgctgttgatccaaacaccaagtatgttgaaaacttaccggttgcggcgatg 7416372  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||| |||||||  ||||||||||||||||||||| |||||||||||||   ||||||||||||||| |||| ||| ||||| |||||||    
T  7416373 tggaagcttcagaaaggtcacggagagggggtcacgtatcggtcattgcttgatcgtattacgtttgatgacgtatgctggacgccgtacgaagagcaca 7416472  T
Q  290 aggagatccagga 302  Q
     |||  |||||||    
T  7416473 tggacttccagga 7416485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3940603 - 3940546
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3940603 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 3940546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5352162 - 5352219
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5352162 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 5352219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20938096 - 20938153
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20938096 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 20938153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30496823 - 30496766
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30496823 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 30496766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43539611 - 43539554
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43539611 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 43539554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 43978719 - 43978776
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43978719 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 43978776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 10828902 - 10828848
Alignment:
Q  4 tttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10828902 tttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 10828848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 29401480 - 29401427
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29401480 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttg 29401427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 15831325 - 15831382
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||    
T  15831325 ccatttaatcacaagtaagtatcttgactcattgtttatcataatgttagtttgggta 15831382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 36656225 - 36656172
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  36656225 ccatttaatcacaagtaagtatcttgactcatttttaattataatgttagtttg 36656172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 45284372 - 45284423
Alignment:
Q  3 atttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  45284372 atttaatcacaagcaagtatcttgactcatttttaatcataatgttagtttg 45284423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 45290833 - 45290884
Alignment:
Q  3 atttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  45290833 atttaatcacaagcaagtatcttgactcatttttaatcataatgttagtttg 45290884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 45291735 - 45291786
Alignment:
Q  3 atttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  45291735 atttaatcacaagcaagtatcttgactcatttttaatcataatgttagtttg 45291786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 5354489 - 5354545
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttga 146  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||||    
T  5354489 tgtttggtttgtgcaggcatggtttttggcgcattttctagggtttttcagtgttga 5354545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 338
Target Start/End: Complemental strand, 20067879 - 20067783
Alignment:
Q  242 atcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    ||||||| ||||||||||||||   ||||||| | ||||| |||||||||||||| ||||  |||||| || | ||||||||||  |||||| ||||    
T  20067879 atcgtatgcagtttgatgacgttatttggaggtcgtacgaagagcacaaggagattcagggttttgagaagattttctggtattcaggctgggttat 20067783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 181; Significance: 1e-97; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 4005981 - 4005733
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  4005981 tgtttggtttgtgcatgcatggtttttggcgcattttcctgggttttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 4005882  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  4005881 tggaagctccagaagggtcacgaggaggggatcatgtatcggtcactgcttgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 4005782  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| ||||| || |||||||||| ||||||||||||    
T  4005781 gagagatccaggacttcgaggatgttttctggtattctggctggattat 4005733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 2272627 - 2272379
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||    
T  2272627 tgtttggtttgtgcaggcatgatttttggcgcattttcctggattttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcaagg 2272528  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| | |||||||||  ||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  2272527 tggaagctccataagggtcacagggaggggatcacgtatcggtcactgcttgatcgtatacagttagatgatgtatgttggaggccgtacgaggagcaca 2272428  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||||||||||||    
T  2272427 gagagatccaggacttcgaggaggttttctggtattctggctggattat 2272379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 90 - 321
Target Start/End: Original strand, 599357 - 599588
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||||| || ||  |||||||||||||||||    
T  599357 tgtttggtttgtgcaggcatggtttttggcgcattttcctggtttttacagagttgatcccaacactgagtacattgacaaccatccggttgcagcgagg 599456  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||    
T  599457 tggaagctccagaagggtcacggggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggtcgtacgaagagcaca 599556  T
Q  290 aggagatccaggactttgaggaggtcttctgg 321  Q
     |||||||||||||||||||||||| ||||||    
T  599557 gggagatccaggactttgaggaggttttctgg 599588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 90 - 332
Target Start/End: Original strand, 16645990 - 16646232
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||| || || |||||||    
T  16645990 tgtttggtttgtgcaggcatggtttttggcgcattttcctggcttttacagtgttgatcccaacactgactacatggaaaactatctggatgtagcgagg 16646089  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| | ||||| |||||||    
T  16646090 tggaagcttcagaagggtcacggggagggggtcacgtatcggtcactgtttgatcgtatacagtttgatgacgtatgctggaggtcgtacgaagagcaca 16646189  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctg 332  Q
     ||||||||||||||||||| |||| |||||||||| ||||||    
T  16646190 gggagatccaggactttgagaaggtattctggtattctggctg 16646232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 166; E-Value: 9e-89
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 47071752 - 47071503
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||    
T  47071752 tgtttggtttgtgcacgcatggtttttggcgcattttcctggcttttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcaagg 47071653  T
Q  190 tggaagctctagaagggtcacgaggaggggg-tcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcac 288  Q
    |||||| |  |||||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  47071652 tggaagtttcagaaggatcacggggaggggggtcacatatcggtcactgcttgatcgtatacagtttgatgacgtatgctggaggccgtacgaagagcac 47071553  T
Q  289 aaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    | |||||||||||||||||||||||| |||||||||| || |||||||||    
T  47071552 agggagatccaggactttgaggaggttttctggtattctgactggattat 47071503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 90 - 346
Target Start/End: Original strand, 36129968 - 36130223
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  36129968 tgtttggtttgtgcagacatggtttttggcgcattttcctgggttttatagtgttgatcc-aacactgactacatggaaaactatccggttgcagcgagg 36130066  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||| |||||| | |||||||||||||    
T  36130067 tggaagctccagaagggtcatggggaggggatcatgtatcggtcactgcttgatcgtatacagttagatgatgtatgctggaggtcgtacgaggagcaca 36130166  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattatctgtggtg 346  Q
      |||||||||||||| |||||||| |||||||||| |||||||||||| |||||||    
T  36130167 gagagatccaggacttcgaggaggttttctggtattctggctggattatgtgtggtg 36130223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 49142089 - 49141841
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  49142089 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 49141990  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  49141989 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgttggaggccgtacgaggagcaca 49141890  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  49141889 gagagatccaggacttcgaggaggttttctggtattctggatggattat 49141841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 50478348 - 50478100
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  50478348 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 50478249  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  50478248 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgttggaggccgtacgaggagcaca 50478149  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  50478148 gagagatccaggacttcgaggaggttttctggtattctggatggattat 50478100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 3495812 - 3495564
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||| ||| ||||||| || |||||||||||||||    
T  3495812 tgtttggtttgtgcaggcatggttttcggcgcattttccagggttttacagtgttgatcccaacactgactacgtggaaaactacccggttgcagcgagg 3495713  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||| |||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  3495712 tggaagctccagaagggtcatggggaggggatcacgtatcagtcactgcttgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 3495613  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  3495612 gagagatccaggacttcgaggaggttttctggtattctgggtggattat 3495564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 322
Target Start/End: Complemental strand, 17565744 - 17565512
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17565744 tgtttggtttgtgcatgcatggtttttggcgcattttcctggcttttacagtgttgatcccaacactgattacatggaaaactatccggttgcagcgagg 17565645  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||| |||||||  |||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  17565644 tggaagcttcagaaaggtcacggagagggggtcacgtatcagtcactacttgatcgtatacagtttgatgacgtatgatggaggccgtacgaagagcaca 17565545  T
Q  290 aggagatccaggactttgaggaggtcttctggt 322  Q
     |||||||||||| ||||| ||||| |||||||    
T  17565544 gggagatccaggattttgaagaggttttctggt 17565512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 34047907 - 34048155
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  34047907 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 34048006  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||||||||||    
T  34048007 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgttggagaccgtacgaggagcaca 34048106  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  34048107 tagagatccaggacttcgaggaggttttctggtattctggatggattat 34048155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 41614751 - 41614999
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  41614751 tgtttggtttgtgcaggcatgatttttggcgcattttcctggcttttacagtgttgatcccaacactgactacatggaaaattatccggttgcggcgagg 41614850  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  ||||||||||    ||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||| ||||| |||||||    
T  41614851 tggaagcttcagaagggtcatagagagggggtcacgtatcgatcactgcttgatcctatacagtttaatgacgtatgttggaggccgtacgaagagcaca 41614950  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| ||||||||||| || |||||||  |||||||||||    
T  41614951 gggagatccaggattttgaggaggttttatggtattcaggctggattat 41614999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 42901731 - 42901483
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  42901731 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 42901632  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  42901631 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 42901532  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  42901531 gagagatccaggacttcgaggaggttttctggtattctggatggattat 42901483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 54388607 - 54388855
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  54388607 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 54388706  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  54388707 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 54388806  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  54388807 gagagatccaggacttcgaggaggttttctggtattctggatggattat 54388855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 46698886 - 46698638
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  46698886 tgtttggtttgtgcaggcatggtttttggcgcatttttcagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 46698787  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  46698786 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 46698687  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  46698686 gagagatccaggacttcgaggaggttttctggtattctggatggattat 46698638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 90 - 335
Target Start/End: Complemental strand, 50214669 - 50214424
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  50214669 tgtttggtttgtgcaggcatggtttttggcgcattttcctgacttttacagtgttgatcccaacactgactacatggaaaactatccagttgcagcgagg 50214570  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  ||||||||||    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| |||||||    
T  50214569 tggaagcttcagaagggtcatagagagggggtcacgtatcggtcactgcttgatcgtatacagtttaatgacgtatgttgcaggccgtacgaagagcaca 50214470  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggat 335  Q
     | |||||||||| ||||||||||| |||| ||||| |||| ||||    
T  50214469 ggaagatccaggattttgaggaggttttctcgtattctggccggat 50214424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 46401187 - 46401435
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||  |||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  46401187 tgtttgctttgtgcaggcatggtttttggcgcattttccagggttttttagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 46401286  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  46401287 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 46401386  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  46401387 gagagatccaggacttcgaggaggttttctggtattctggatggattat 46401435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 51807658 - 51807906
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||||| ||| ||||||| ||||||    
T  51807658 tgtttggtttgtgcaggcatggtttttggcgcattttcctggcttttacagtgttgatcccaacacggactacatggaaaactattcggttgcggcgagg 51807757  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||| |||  || ||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||||||    
T  51807758 tggaagcttcagaagggtgacggagatggggtcacgtatcggtcactgcttgatcgtatacaatttgatgatgtatgctggaggccgtacgaagagcaca 51807857  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     ||||||||| || ||||||||||| ||||||||||  |||||||||||    
T  51807858 gggagatccaagattttgaggaggttttctggtattcaggctggattat 51807906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 49266939 - 49266692
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||  |||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||| |||||| ||||||    
T  49266939 tgtttggtttgtgcatccatggtttttggcgaattttcctggcttttacagtgttgatcccaacactgactacatggaaaactatctggttgcggcgagg 49266840  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||| |||  | |||||||||||||||||||||||||||||||||| |||||||||||||||| || ||| | ||||| |||||||    
T  49266839 tggaagcttcagaagggt-acggagtgggggtcacgtatcggtcactgcttgatcgtatatagtttgatgacgtatgctgaaggtcgtacgaagagcaca 49266741  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    ||||||||||| | ||||||||||| ||||||||||| |||||||||||    
T  49266740 aggagatccagaattttgaggaggttttctggtatttaggctggattat 49266692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 90 - 335
Target Start/End: Complemental strand, 52389139 - 52388898
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||| |||| |||||||||  ||| |||    
T  52389139 tgtttggtttgtgcaaacatggtttttggcgcatttttctgggttttacagtgttgatcccaacactgactacatgaaaaactatccggttagagcaagg 52389040  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||    || ||||||||||| |||||||| |||||||||||||    
T  52389039 tggaagctccagaagggtcacggggaggggatcacgtatcggtcactgcttgatcgtat----ttagatgacgtatgctggaggccgtacgaggagcaca 52388944  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggat 335  Q
      |||||||||||||| |||||||| |||||||||| |||||||||    
T  52388943 gagagatccaggacttcgaggaggttttctggtattctggctggat 52388898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 90 - 346
Target Start/End: Original strand, 44232200 - 44232456
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| || |||||||||||  ||| |||||||||||||    
T  44232200 tgtttggtttgtgcagacatggtttttggcgcattttcctggcttttacagtgttgatcccaacaccgactacatggaaaaccatctggttgcagcgagg 44232299  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  | |||||||| |   | ||||||||||||| ||| ||||||||||||||| |||||||||||||||| |||||||| ||||| |||||||    
T  44232300 tggaagcttcataagggtcatggatatggggtcacgtatcagtcgctgcttgatcgtataaagtttgatgacgtatgctggaggccgtacgaagagcaca 44232399  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattatctgtggtg 346  Q
     |||||||||||| ||| ||||||| ||||||||||  ||||||||||| |||||||    
T  44232400 tggagatccaggattttaaggaggttttctggtattcaggctggattatgtgtggtg 44232456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 20353023 - 20353271
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||  ||||||||| |||||||||| ||||| ||||||||||||||||| || ||||||||||| |||| |||||| ||||||    
T  20353023 tgtttggtttgtgcagacatcatttttggcgcattttcctggcttttatagtgttgatcccaacaccgactacatggaaaactatctggttgcggcgagg 20353122  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  | |||||||| |  ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||| ||||| |    
T  20353123 tggaagcttcataagggtcatggagagggggtcacgtatcggtcactacttgatcatatacagtttgatgacgtatgttggaggccgtacgaagagcata 20353222  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| ||||||||| | ||||||||||  |||||||||||    
T  20353223 gggagatccaggattttgaggagattttctggtattcaggctggattat 20353271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 90 - 346
Target Start/End: Original strand, 48565358 - 48565614
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||| ||| |||||||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||||| ||||||||||| || |||    
T  48565358 tgtttggtttgtacagacatggtttttggcgcattttcctggcttttacagtgttgatcccaacaccgactacatggaaaactatccggttgcggcaagg 48565457  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  | |||||||| |  |||||||| || | ||| ||| | ||||||||||| ||||||||||||||||| |||||||| ||||| ||||||     
T  48565458 tggaagctacataagggtcatggagagggggtgacatgtcgctcatttcttgatcgtattcagtttgatgacgtatgctggaggccgtacgaagagcact 48565557  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattatctgtggtg 346  Q
     |||||||||||| ||||||||||| ||||||| ||  |||| |||||| |||||||    
T  48565558 gggagatccaggattttgaggaggttttctggtgttcaggctagattatgtgtggtg 48565614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 42759144 - 42759392
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||| ||||||||| |||||||| | ||||||||||||||||||||||| || || ||| |||| |||||| |||| ||||||    
T  42759144 tgtttggtttgtgcagacatgatttttggcgcattttcctagcttttacagtgttgatcccaacaccgactatatgaaaaactatccgtttgcggcgagg 42759243  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    |||||||   |||||||||| |   ||||||| |||||||  ||| ||||||||||||| ||||||||||| ||||| |||||| | ||||| |||||||    
T  42759244 tggaagccacagaagggtcatggatagggggtgacgtatcactcattgcttgatcgtattcagtttgatgatgtatgctggaggtcgtacgaagagcaca 42759343  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     ||||||||| || |||||||||   ||||||||||  ||||| |||||    
T  42759344 gggagatccaagattttgaggagcctttctggtattcaggctgaattat 42759392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 50758581 - 50758829
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| | |||||   ||||||   ||||||||| |||||  | ||  | ||||| |  |||||||| ||||||    
T  50758581 tgtttggtttgtgcaggcatggtttttggcgcactttccaaagttttatgctgttgatccaaacaccaagtatgttgaaaacttaccggttgcggcgagg 50758680  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  |||||||||||||||| ||||||||||||||||||   |||||||||||||||||||||||| ||||| |||||||    
T  50758681 tggaagcttcagaagggtcatggagagggggtcacgtatcagtcactgcttgatcgtattatgtttgatgacgtatgttggaggccgtacgaagagcaca 50758780  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    ||||  || |||  || |||||||| ||||||||||  |||||||||||    
T  50758781 aggacttctaggctttcgaggaggtattctggtattcaggctggattat 50758829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 90 - 346
Target Start/End: Complemental strand, 30253665 - 30253409
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| | ||||||  ||||||   ||||||||| |||||  | ||  | |||||||  |||||||  ||||||    
T  30253665 tgtttggtttgtgcagacatggtttttggcgcactttcctaagttttatgctgttgatccaaacaccaaatatgttgaaaatttaccggttggggcgagg 30253566  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    | ||||||  |||||||||| |  ||||||||||||||||||||| |||||||||||||   ||||||||||||||| |||||||| ||||| |||||||    
T  30253565 tagaagcttcagaagggtcatggagagggggtcacgtatcggtcattgcttgatcgtattacgtttgatgacgtatgctggaggccatacgaagagcaca 30253466  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattatctgtggtg 346  Q
     |||  ||||||  || |||||||| || |||||||  ||||||||||| |||||||    
T  30253465 gggacttccaggctttcgaggaggtattatggtattcaggctggattatgtgtggtg 30253409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 338
Target Start/End: Complemental strand, 42805447 - 42805284
Alignment:
Q  175 ccggttgcagcgaggtggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggc 274  Q
    |||||||| ||||||||||||||  |||||||||| |  ||||||||||||||||  ||  |||||||||||||   |||||||||||||||||||||||    
T  42805447 ccggttgcggcgaggtggaagcttcagaagggtcatggagagggggtcacgtatctttctttgcttgatcgtattatgtttgatgacgtatgttggaggc 42805348  T
Q  275 cttacgaggagcacaaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    | ||||| ||||||| |||  ||||||  || |||||||| ||||||||||  |||||||||||    
T  42805347 cgtacgaagagcacatggacttccaggctttcgaggaggtattctggtattcaggctggattat 42805284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42904065 - 42904008
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42904065 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 42904008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 46389157 - 46389214
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46389157 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 46389214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 54386322 - 54386379
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  54386322 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 54386379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2274792 - 2274735
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  2274792 ccatttaatcacaagtaagtatcttgactcatttttaatcataacgttagtttgggta 2274735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17567939 - 17567886
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17567939 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttg 17567886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 41612567 - 41612620
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41612567 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttg 41612620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 50480658 - 50480601
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  50480658 ccatttaatcacaagtaagtattttgactcatttttaatcataatgttagtttgggta 50480601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20350844 - 20350892
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgtta 49  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20350844 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgtta 20350892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 46701897 - 46701846
Alignment:
Q  3 atttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46701897 atttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttg 46701846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16611272 - 16611326
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgg 55  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  16611272 ccatttaatcacaagtaagtatcttgactcattttcaatcataatgttagtttgg 16611326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22047981 - 22047927
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgg 55  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  22047981 ccatttaatcacaagtaagtatcttgactcattttcaatcataatgttagtttgg 22047927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 52391270 - 52391213
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  52391270 ccatttaatcacaagtaagtatcttgactcatttgtaatcataatgttagcttgggta 52391213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 2967799 - 2967743
Alignment:
Q  2 catttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  2967799 catttaaacacaagtaagtatgttgactcatttttaatcataatgttagtttgggta 2967743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 34045575 - 34045631
Alignment:
Q  2 catttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  34045575 catttaaacacaagtaagtatattgactcatttttaatcataatgttagtttgggta 34045631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 49144336 - 49144280
Alignment:
Q  2 catttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  49144336 catttaaacacaagtaagtatattgactcatttttaatcataatgttagtttgggta 49144280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29009058 - 29009115
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||| ||||| || |||||||||||| ||||||||    
T  29009058 ccatttaatcacaagtaagtatcttgaatcattgtttatcataatgttagtttgggta 29009115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 36127605 - 36127662
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||| | |||| |||||||||||||| ||||||||    
T  36127605 ccatttaatcacaagtaagtatcttgattaatttgtaatcataatgttagtttgggta 36127662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4172000 - 4172053
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    |||||| ||||||||||||||  || ||| ||||||||||||||||||| ||||    
T  4172000 ccattttatcacaagtaagtaggtttactaatttttaatcataatgttagtttg 4172053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 177; Significance: 2e-95; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 9228 - 8980
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  9228 tgtttggtttgtgcaggcatggtttttggcgcattttcctgggttttacagtgttgatcccaacactgactacatggaaaattatccggctgcagcgagg 9129  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| |||| |||||| || ||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  9128 tggaagctccagaagggtcatggggaggggatcacatatcggacaatgcttgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 9029  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||||||||||||||||    
T  9028 gagagatccaggacttcgaggaggttttctggtattttggctggattat 8980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 8578114 - 8577866
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||     
T  8578114 tgtttggtttgtgcaggcatggtttttggcgcattttccagggttttacagtgttgatcccaacactgattacgtggaaaactatccggttgcagcgaga 8578015  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  8578014 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgcttgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 8577915  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  8577914 gagagatccaggacttcgaggaggttttctggtattctgggtggattat 8577866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 38408419 - 38408171
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||    
T  38408419 tgttgggtttgtgcaggcatggtttttggcgcgttttcctggcttttacagtgttgatcccaacgctgactacatggaaaactatccggttgcagcgagg 38408320  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  38408319 tggaagcttcagaagggtcacggagagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgctggaggccgtacgaagagcaca 38408220  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     ||||||||| || ||||||||||| |||||||||| ||||||||||||    
T  38408219 gggagatccatgattttgaggaggttttctggtattctggctggattat 38408171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 7759819 - 7760067
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  7759819 tgtttggtttgtgcagacatggtttttggcgcattttcctggcttttatagtgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 7759918  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  7759919 tggaagcttcagaagggtcacggggagggggtcacgtatcggtcactacttgatcgtatacagtttgatgacgtatgctggaggccgtacgaagagcaca 7760018  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     ||||||||| ||||||||  |||| |||||||||| | | ||||||||    
T  7760019 gggagatccaagactttgaacaggttttctggtattcttgatggattat 7760067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 19038738 - 19038490
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||  |||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  19038738 tgtttgctttgtgcaggcatggtttttggcgcattttccagggttttttagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 19038639  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  19038638 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 19038539  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  19038538 gagagatccaggacttcgaggaggttttctggtattctggatggattat 19038490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 90 - 346
Target Start/End: Original strand, 30707530 - 30707785
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||||||||    
T  30707530 tgtttggtttgtgcaagcatggtttttggtgcattttccagggttttacagtgttgatcccaacactgactacgtggaaaactatccagttgcagcgagg 30707629  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | || || | ||||||||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||    
T  30707630 tggaagctccagaagggtcatg-gggggagatcacgtatcggtcactgcttgatcgtatacaattagatgatgtatgttggaggccgtacgaggagcaca 30707728  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattatctgtggtg 346  Q
      |||||||||||||| |||||||| |||||||||| ||| |||||||| |||||||    
T  30707729 gagagatccaggacttcgaggaggttttctggtattatgggtggattatgtgtggtg 30707785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 90 - 335
Target Start/End: Original strand, 28879080 - 28879325
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  28879080 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 28879179  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| | |||||||| | ||||||| |||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| || ||||||||||    
T  28879180 tggaagctccaaaagggtcatggggaggggatcacgtatcggtcactgcttgatcatatacagttagatgatgtatgttggaggccgtaggaggagcaca 28879279  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggat 335  Q
      |||||||||||||| |||||| | ||||||||||  ||||||||    
T  28879280 gagagatccaggacttcgaggagattttctggtattcaggctggat 28879325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 28239308 - 28239060
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| |||| |||||||||||||    
T  28239308 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatctggttgcagcgagg 28239209  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||| || |||||||||||||| ||||| ||||| ||| |||| |||||||||||||    
T  28239208 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactcctcgatcgtatacagttagatgatgtatgctggcggccgtacgaggagcaca 28239109  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  28239108 gagagatccaggacttcgaggaggttttctggtattctggatggattat 28239060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 90 - 335
Target Start/End: Complemental strand, 42938212 - 42937967
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||| || |||||||| || ||||||    
T  42938212 tgtttggtttgtacaggcatggtttttggcgcattttcctggcttttacagtgttgatcccaacactgactacatggagaactatccggtggcggcgagg 42938113  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  ||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| | ||||| |||||||    
T  42938112 tggaagcttcagaagggtcacggagagggggtcacgtatcggtcactgcttgatcatatacagtttgatgacgtatgctggaggtcgtacgaagagcaca 42938013  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggat 335  Q
     ||||||||| || ||| ||||||| ||||||| ||  ||||||||    
T  42938012 gggagatccaagatttttaggaggttttctggttttcaggctggat 42937967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 512178 - 511930
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||    
T  512178 tgtttggtttgtgcaggcatggtttttgccgcattttcctggcttttacagtgttgatcccaacaccgactacatggaaaattatccggttgcggcgagg 512079  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    |||||| | ||||||||||| |  |||||||| |||||||| ||| || |||||||||| ||||||||||||||||| |||||| | ||||| |||||||    
T  512078 tggaagttatagaagggtcatggagagggggtgacgtatcgctcattgtttgatcgtattcagtttgatgacgtatgctggaggtcgtacgaagagcaca 511979  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     ||||||| |||| ||||||||||| ||||||||||   ||||||||||    
T  511978 gggagatctaggattttgaggaggttttctggtattcatgctggattat 511930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 5199249 - 5199497
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||| ||| |||||||||  |||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||    
T  5199249 tgtttggtttgtgcaggcatggtttttagcgcattttcctgacttttacagtgttgatcccaatactgactacatggaaaactatccggttgcggcgagg 5199348  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    |||||| |  |||||||||||   ||||||||||| ||| |||||||| |||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  5199349 tggaagtttcagaagggtcactgagagggggtcacatattggtcactgtttgatcgtatacagtttgatgacgtatgctggaggccgtacgaagagcaca 5199448  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| ||||| ||||| ||||||||||  ||||| |||||    
T  5199449 gggagatccaggattttgaagaggttttctggtattcaggctgaattat 5199497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 42538275 - 42538523
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||| || |||| ||||||||| |||||||||| ||||| | ||||||||||||||| || || |||||||| |||| |||||| ||||||    
T  42538275 tgtttggtttgtgtagacatgatttttggcgcattttcctggcttttagaatgttgatcccaacaccgactatatggaaaactatctggttgcggcgagg 42538374  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  | |||||||| |  || ||||| |||||||  ||| ||||||||||||| ||||||||| ||| ||| |||||||| ||||| |||||||    
T  42538375 tggaagctacaaaagggtcatggagaaggggtgacgtatcactcattgcttgatcgtattcagtttgataacgcatgctggaggccgtacgaagagcaca 42538474  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| ||||||||||| ||||||||||  |||||||||||    
T  42538475 tggagatccaggattttgaggaggttttctggtattcaggctggattat 42538523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 38970523 - 38970771
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||  |||||||||| |||| |||||||||||| ||||| || ||  | ||||| | ||||||||| ||||||    
T  38970523 tgtttggtttgtgcaggcatgatttttggcccattttcctggatttttcagtgttgatccaaacaccgactatgttgaaaactttccggttgcggcgagg 38970622  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  | |||||||| |  |||||| | |||||||| | | |||||||||||||  | |||||||| |||||||||||| | ||||| |||||||    
T  38970623 tggaagctacataagggtcatggagaggggttgacgtatcgctaattgcttgatcgtatttattttgatgatgtatgttggaggtcgtacgaagagcaca 38970722  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||  ||||||||| | || |||||||  |||||||||||    
T  38970723 gggagatccagggttttgaggagatattatggtattcaggctggattat 38970771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 8700001 - 8699753
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||| || |||||||||||||| | ||||||  ||||||   ||||||||| |||||  | ||  | ||||| |  |||||||| ||||||    
T  8700001 tgtttggtttgtgtagacatggtttttggcgcagtttcctaagttttatgttgttgatccaaacaccaactatgttgaaaacttaccggttgcggcgagg 8699902  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  |||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||| | ||||| || ||||    
T  8699901 tggaagcttcagaagggtcatggagagggggtcacgtatcggtcactgcttgatcgtattacgtttgatgacgtatgctggaggtcgtacgaagaacaca 8699802  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    ||||  || |||  ||||||||||| ||||||||||  |||||||||||    
T  8699801 aggacttctaggcttttgaggaggtattctggtattcaggctggattat 8699753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30705334 - 30705391
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30705334 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 30705391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27673529 - 27673472
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27673529 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 27673472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 19040991 - 19040935
Alignment:
Q  2 catttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  19040991 catttaaacacaagtaagtatgttgactcatttttaatcataatgttagtttgggta 19040935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 15939273 - 15939336
Alignment:
Q  236 tgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaaggagatcca 299  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||| |||| || |||||||||    
T  15939273 tgcttgatcgtattcagtttgatgatgtatgttggaggccgtacgaagagcgcatggagatcca 15939336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 5197184 - 5197221
Alignment:
Q  17 aagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  5197184 aagtatcttgactcatttttaatcataatgttagtttg 5197221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 21019167 - 21018919
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  21019167 tgtttggtttgtgcaggcatggtttttggcgcattttcctgggttttacagtgttgatcccaacactgactacatggaaaattatctggttgcagcgagg 21019068  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||| ||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| |    
T  21019067 tggaagctccagaagggtcatggggaggggatcacgtatcggtcattgcttgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcata 21018968  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||||||||||||    
T  21018967 gagagatccaggacttagaggaggttttctggtattctggctggattat 21018919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 44677559 - 44677311
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  44677559 tgtttggtttgtgcaggcatggtttttggcgcattttcctaggttttatagtgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 44677460  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||| || |||||||    
T  44677459 tggaagcttcagaagggtcacggggagagggtcacgtatcggtcactgcttgatcgtatatagtttgatgacgtatgcttgaggccttatgaagagcaca 44677360  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||||||||||||||| || ||||||| ||||||||||||    
T  44677359 gggagatccaggactttgaggaggttttttggtattctggctggattat 44677311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 50277636 - 50277884
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||| | ||||||||||  ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |    
T  50277636 tgtttggtttgtgcaggcatggtttttggtgcattttcctggcctttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcgaag 50277735  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    |||||||| |||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  50277736 tggaagctttagaagggtcacggagagggggtcacgtatcggtcactacttgatcgtatacagtttgatgacgtatgctggaggccgtacgaagagcaca 50277835  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      ||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  50277836 gagagatccaggattttgaggaggttttctggtattctggctggattat 50277884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 50195883 - 50196131
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  50195883 tgtttggtttgtgcaggcatggtttttggcgcattttcctggcttttacagtgttgatcccaacactgactacatggaaaactatccggttgcggcgagg 50195982  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    | ||||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  50195983 tagaagcttcagaagggtcacggagagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgctggaggccgtacgaagagcaca 50196082  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||| | ||||||||||| ||||||||||  || ||||||||    
T  50196083 gggagatccagaattttgaggaggttttctggtattcaggttggattat 50196131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 1306711 - 1306463
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  1306711 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 1306612  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  1306611 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 1306512  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  1306511 gagagatccaggacttcgaggaggttttctggtattctggatggattat 1306463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 6179379 - 6179131
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  6179379 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 6179280  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  6179279 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 6179180  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  6179179 gagagatccaggacttcgaggaggttttctggtattctggatggattat 6179131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 346
Target Start/End: Complemental strand, 37017160 - 37016904
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  37017160 tgtttggtttgtgcaggcatggtctttggcgcattttcctggcttttacagtgttgatcccaacactgactacatggaaaactatctggttgcagcgagg 37017061  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||||  ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| || | ||||| ||||| |    
T  37017060 tggaagcttcagaagggtcacagggaggggatcacgtatcggtcactgcttgattgtatacagtttgatgacgtatgctggtggtcgtacgaagagcata 37016961  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattatctgtggtg 346  Q
     |||||||||| ||||||||||||| |||||||||| ||| |||||||| |||||||    
T  37016960 gggagatccagaactttgaggaggttttctggtattctggttggattatgtgtggtg 37016904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 49092903 - 49093151
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| |||||||||||||| |||    
T  49092903 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcaagg 49093002  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  49093003 tggaagctccagaagggtcacggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 49093102  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  49093103 gagagatccaggacttcgaggaggttttctggtattctggatggattat 49093151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 31424222 - 31424470
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| | ||||| ||||||||||||||||||    
T  31424222 tgtttggtttgtgcagacatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctagaaaactatccggttgcagcgagg 31424321  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  31424322 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 31424421  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      ||||| |||||||| |||||||| |||||||||| ||| ||||||||    
T  31424422 gagagattcaggacttcgaggaggttttctggtattctggatggattat 31424470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 40355992 - 40355744
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||||||||    
T  40355992 tgtttggtttgtgcaagcatggtttttggcgcatttttcagggttttacagtgttgatcccaacactgactacgtggaaaactatccagttgcagcgagg 40355893  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| | |||||||| | || |||| |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  40355892 tggaagctccataagggtcatggggtggggatcacgtatcggtcactgcttgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 40355793  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| || ||||||| ||| ||||||||    
T  40355792 gagagatccaggacttcgaggaggttttatggtattctgggtggattat 40355744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 41796615 - 41796366
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttac-agtgttgatcccaacactgattacatggaaaattatccggttgcagcgag 188  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||   |||||||||| ||||||||| ||| ||||||| |||||||||||||||||    
T  41796615 tgtttgctttgtgcaggcatggtttttggcgcattttccagggtttttttagtgttgatctcaacactgactacctggaaaactatccggttgcagcgag 41796516  T
Q  189 gtggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcac 288  Q
    |||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||| | ||||||||||||    
T  41796515 gtggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggtcgtacgaggagcac 41796416  T
Q  289 aaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    |  |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  41796415 agagagatccaggacttcgaggaggttttctggtattctggatggattat 41796366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 90 - 313
Target Start/End: Original strand, 50903845 - 50904068
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| |||||||||  |||||||||||||||||||||||||| |||||||| || |||| ||| || ||||||    
T  50903845 tgtttggtttgtgcagacatggtttttggcgcattttcctgacttttacagtgttgatcccaacactgactacatggagaactatctggtggcggcgagg 50903944  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||||   |||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||  ||||||    
T  50903945 tggaagcttcagaagggtcacagagaggggatcacgtatcggtcactgcttgatcgtatatagtttgatgacgtatgctggaggccgtacgaaaagcaca 50904044  T
Q  290 aggagatccaggactttgaggagg 313  Q
    ||||||||||||| ||||||||||    
T  50904045 aggagatccaggattttgaggagg 50904068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 134 - 346
Target Start/End: Original strand, 8109677 - 8109889
Alignment:
Q  134 tttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgaggtggaagctctagaagggtcacgaggagggggtcacgtatcggtc 233  Q
    |||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||  |||||||||| |  ||||||||||||||||| ||    
T  8109677 tttacagtgttgatcccaacaccgactacatggaaaactatccggttgcggcgaggtggaagcttcagaagggtcatggagagggggtcacgtatcgatc 8109776  T
Q  234 actgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaaggagatccaggactttgaggaggtcttctggtattttggctgg 333  Q
    |||||||||||||||| |||||||||||||||| |||||||| ||||| ||| ||| ||||||||| || ||||||||||| ||||||||||  ||||||    
T  8109777 actgcttgatcgtatatagtttgatgacgtatgctggaggccgtacgaagagtacatggagatccaagattttgaggaggttttctggtattcaggctgg 8109876  T
Q  334 attatctgtggtg 346  Q
    ||||| |||||||    
T  8109877 attatgtgtggtg 8109889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 50021261 - 50021013
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||  |||||||| | |||||||||||||||||||||||| | ||||||||||| ||||||||| | ||||||    
T  50021261 tgtttggtttgtgcaggcatgatttttggctcattttcctagcttttacagtgttgatcccaacacttactacatggaaaactatccggtttcggcgagg 50021162  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  ||| |||||| |||||||||||||||||||||||||||||||||||||||||| | |||| | ||||| || ||||    
T  50021161 tggaagcttcagaagggtcatggagagtgggtcatgtatcggtcactgcttgatcgtatacagtttgatgacgtatgctagaggtcgtacgaagaacaca 50021062  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||| || || ||||||||||| ||||||||||  || ||||||||    
T  50021061 gggagatacatgattttgaggaggttttctggtattcaggttggattat 50021013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 51685617 - 51685865
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| ||||||||||||||| |||||| ||| ||| ||||||||||||||||||| || ||||||||||| ||||||||||| || ||     
T  51685617 tgtttggtttgtgcaagcatggtttttggcgcattttcttggctttcacagtgttgatcccaacaccgactacatggaaaactatccggttgcggcaaga 51685716  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  ||||||||||||||||||||||| ||||||||||| |||||||| ||| |||| |||||||| ||||| |||||||    
T  51685717 tggaagcttcagaagggtcatggagagggggtcacgtatcggtcactacttgatcgtattcagtttgacgacatatgctggaggccgtacgaagagcaca 51685816  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||| | || ||||||||||| ||||||||||  |||||||||||    
T  51685817 gagagatctaagattttgaggaggttttctggtattcaggctggattat 51685865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 30724328 - 30724090
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||          |||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  30724328 tgtttggtttgtgcaggcatggtttttggcgcatttttcagggtt----------gatctcaacactgactacctggaaaactatccggttgcagcgagg 30724239  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| | ||| || ||||| |||||||||||||    
T  30724238 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgcatgctgaaggccgtacgaggagcaca 30724139  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  30724138 gagagatccaggacttcgaggaggttttctggtattctggatggattat 30724090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 46438549 - 46438798
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgtt-gatcccaacactgattacatggaaaattatccggttgcagcgag 188  Q
    ||||||||||||||| ||||| ||||||||| |||||||||| |||| ||||||| ||||||||||| || || || ||||| || |||||||| |||||    
T  46438549 tgtttggtttgtgcatgcatgttttttggcgcattttcctggctttttcagtgtttgatcccaacaccgactatattgaaaactacccggttgcggcgag 46438648  T
Q  189 gtggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcac 288  Q
    |||||||||  | |||||||| |  |||||| | |||||||| ||| ||||||||| ||| |||||||||||||||||||||||||| ||||| ||||||    
T  46438649 gtggaagctacataagggtcatggagaggggttgacgtatcgctcattgcttgatcatattcagtttgatgacgtatgttggaggccgtacgaagagcac 46438748  T
Q  289 aaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    |||||||||||||  ||||||||| | |||| |||||  |||||||||||    
T  46438749 aaggagatccagggatttgaggagatattctagtattcaggctggattat 46438798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 171 - 338
Target Start/End: Original strand, 49168074 - 49168241
Alignment:
Q  171 ttatccggttgcagcgaggtggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttgg 270  Q
    |||||||||||||||||||||||||||| |||||||||| | ||||||| ||| ||||||||||||||| |||||||||||||| ||||| ||||| |||    
T  49168074 ttatccggttgcagcgaggtggaagctccagaagggtcatggggaggggatcatgtatcggtcactgctcgatcgtatacagttagatgatgtatgctgg 49168173  T
Q  271 aggccttacgaggagcacaaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    ||||| |||||||||||||  |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  49168174 aggccgtacgaggagcacagagagatccaggacttcgaggaggttttctggtattctggatggattat 49168241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 90 - 336
Target Start/End: Complemental strand, 10730569 - 10730323
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||| ||||||||||| ||||| || ||  | ||||| | | ||||||| |||||     
T  10730569 tgtttggtttgtgcaggcatggtttttggcgcattttcctaagttttatagtgttgatccaaacaccgactatgttgaaaactttacggttgcggcgagt 10730470  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    |||||| |  |||||||||  |  |||||||| |||||||| |||  | |||||||||| ||||||||||||||||| |||||||| ||||| |||||||    
T  10730469 tggaagttacagaagggtcgtggagagggggtgacgtatcgctcatagattgatcgtattcagtttgatgacgtatgctggaggccgtacgaagagcaca 10730370  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggatt 336  Q
    |||||||||| |  ||||||||||| ||||||||||| |||||||||    
T  10730369 aggagatccaaggttttgaggaggttttctggtatttaggctggatt 10730323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 90 - 336
Target Start/End: Complemental strand, 10944338 - 10944092
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||| ||||||||||| ||||| || ||  | ||||| | | ||||||| |||||     
T  10944338 tgtttggtttgtgcaggcatggtttttggcgcattttcctaagttttatagtgttgatccaaacaccgactatgttgaaaactttacggttgcggcgagt 10944239  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    |||||| |  |||||||||  |  |||||||| |||||||| |||  | |||||||||| ||||||||||||||||| |||||||| ||||| |||||||    
T  10944238 tggaagttacagaagggtcgtggagagggggtgacgtatcgctcatagattgatcgtattcagtttgatgacgtatgctggaggccgtacgaagagcaca 10944139  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggatt 336  Q
    |||||||||| |  ||||||||||| ||||||||||| |||||||||    
T  10944138 aggagatccaaggttttgaggaggttttctggtatttaggctggatt 10944092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 90 - 323
Target Start/End: Original strand, 30706399 - 30706631
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||  |||||||   ||||| |||||||||||| ||||| || ||  | ||||| | |||| |||| ||||||    
T  30706399 tgtttggtttgtgcagacatggtttttggcccattttccgaagtttttcagtgttgatccaaacaccgactatgttgaaaactttccgattgcggcgagg 30706498  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  |||||| | | |||||| ||| ||||||||||||| ||||||||||||||||| ||||||||  |||| |||||||    
T  30706499 tggaagctacagaagggtcatggagaggggttgatgtatcgctcattgcttgatcgtattcagtttgatgacgtatgctggaggcc-gacgaagagcaca 30706597  T
Q  290 aggagatccaggactttgaggaggtcttctggta 323  Q
     |||||||||||  ||||||||| | ||||||||    
T  30706598 tggagatccagggttttgaggagatattctggta 30706631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 71418 - 71667
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgg-gttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgag 188  Q
    ||||||||||| | ||||||||||||||||| | ||||||   |||||| ||||||||||| ||||| || ||  | ||||| |  |||| ||| |||||    
T  71418 tgtttggtttgggaaggcatggtttttggcgcactttccttaagttttatagtgttgatccaaacaccgactatgttgaaaacttaccggctgcggcgag 71517  T
Q  189 gtggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcac 288  Q
    |||||||||  |||||||||| |  |||||||| || ||||||||| |||||||||||||   ||||||||| |||||||||||| | ||||| ||||||    
T  71518 gtggaagcttcagaagggtcatggagagggggtgacctatcggtcattgcttgatcgtattacgtttgatgaagtatgttggaggtcgtacgaagagcac 71617  T
Q  289 aaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    | ||| |||||||  || |||||||| || |||||||  |||||||||||    
T  71618 atggacatccaggctttcgaggaggtattatggtattcaggctggattat 71667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 14317091 - 14317339
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||  |||||||||||||| ||||||||  |||||| ||||||||||| ||||| || ||  | ||||| | ||||||||| ||||||    
T  14317091 tgtttggtttgtgcatacatggtttttggcgcattttcctaagttttatagtgttgatccaaacaccgactatgttgaaaactttccggttgcggcgagg 14317190  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |  ||||||| |  |||||||| || ||||| ||  ||||||||||||| ||||||||||||||      || ||| ||||| |||||||    
T  14317191 tggaagcttcatgagggtcatggagagggggtgacatatcgctccttgcttgatcgtattcagtttgatgacgttaccaagatgccgtacgaagagcaca 14317290  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||| ||||  ||||||||||| ||||||||||  |||||||||||    
T  14317291 gggagattcagggttttgaggaggttttctggtattcaggctggattat 14317339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 176 - 338
Target Start/End: Complemental strand, 41931465 - 41931303
Alignment:
Q  176 cggttgcagcgaggtggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggcc 275  Q
    ||||||| ||||||||||||||  | |||||||| |  |||||||| |||||||| ||| |||||||| |||| ||||||||| ||||||||||||||||    
T  41931465 cggttgcggcgaggtggaagctacataagggtcatggagagggggtgacgtatcgctcattgcttgattgtattcagtttgataacgtatgttggaggcc 41931366  T
Q  276 ttacgaggagcacaaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     ||||| ||||||| ||||||||||   ||||||||||| ||||||||||  || ||||||||    
T  41931365 gtacgaagagcacatggagatccagccttttgaggaggttttctggtattaaggatggattat 41931303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 12891393 - 12891641
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||| ||||||||||||  ||||| |||   ||| |||||||||||| ||  |  | || || ||||| |||| |||||| |||| |    
T  12891393 tgtttggtttgtgcagggatggtttttggcccatttttctgaccttttcagtgttgatccaaatcccaagtatattgaaaactatctggttgcggcgaag 12891492  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgt-tggaggccttacgaggagcac 288  Q
    |||    | ||||||||| | |  |||||||| |||||||| ||| ||||||||||||| |||||||||||||| ||| |||||||| ||||| ||||||    
T  12891493 tggtcattatagaagggttatggagagggggtgacgtatcgctcattgcttgatcgtattcagtttgatgacgt-tgtctggaggccgtacgaagagcac 12891591  T
Q  289 aaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    | |||||||||||  ||||||||| | ||||||||||  |||||| ||||    
T  12891592 agggagatccagggttttgaggagattttctggtattcaggctgggttat 12891641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 90 - 336
Target Start/End: Complemental strand, 11081938 - 11081692
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| ||| |||| ||||| ||||||||   |||||| |||||||||| ||  |  | ||||| ||||| |||| ||| || ||||||    
T  11081938 tgtttggtttgtgcagacattgtttctggcgcattttcctaaattttaccgtgttgatccaaatcccaactacattgaaaactatctggtggcggcgagg 11081839  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    |||  | |  |||||||||| |  |||||||| || ||||| ||| | ||||||||||| |  ||||||||| |||| |||||| | ||||| ||||||     
T  11081838 tgggcgttacagaagggtcatggagagggggtgacatatcgctcatttcttgatcgtattccatttgatgacatatgctggaggtcgtacgaagagcacg 11081739  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggatt 336  Q
     |||||||||||  ||||||||||| ||||||||||  |||||||||    
T  11081738 gggagatccaggcatttgaggaggttttctggtattcgggctggatt 11081692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6181665 - 6181608
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6181665 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 6181608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9893140 - 9893083
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9893140 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 9893083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 44679950 - 44679893
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44679950 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 44679893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 49090619 - 49090676
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49090619 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 49090676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3185965 - 3185908
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  3185965 ccatttaatcacaagtaagtatctttactcatttttaatcataatgttagtttgggta 3185908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30704224 - 30704277
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30704224 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttg 30704277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50023420 - 50023367
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50023420 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttg 50023367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50030538 - 50030485
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50030538 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttg 50030485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 50193675 - 50193728
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50193675 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttg 50193728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3184152 - 3184209
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||    
T  3184152 ccatttaatcacaagtaagtatttttactcatttttaatcataatgttagtttgggta 3184209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 31421896 - 31421953
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  31421896 ccatttaatcacaattaaatatcttgactcatttttaatcataatgttagtttgggta 31421953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 49165233 - 49165289
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  49165233 ccatttaatcacaagtaagtatcttgactcattttt-atcataatgttagtttgggta 49165289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 41800820 - 41800764
Alignment:
Q  2 catttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||    
T  41800820 catttaaacacaactaagtatgttgactcatttttaatcataatgttagtttgggta 41800764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 11051285 - 11051244
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcat 42  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  11051285 ccatttaatcacaagtaagtaccttgactcatttttaatcat 11051244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 55279355 - 55279299
Alignment:
Q  93 ttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcc 149  Q
    |||||||||||||| |||||||||||| ||||||| |||  ||||||||||||||||    
T  55279355 ttggtttgtgcagggatggtttttggcctattttcttggcctttacagtgttgatcc 55279299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 55280119 - 55280068
Alignment:
Q  3 atttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    |||||||||||||||||||  |||||| ||||||||||||||||||| ||||    
T  55280119 atttaatcacaagtaagtagtttgactgatttttaatcataatgttagtttg 55280068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 49168022 - 49168057
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattt 125  Q
    ||||||||||||||||||||||||||||||| ||||    
T  49168022 tgtttggtttgtgcaggcatggtttttggcgcattt 49168057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 312
Target Start/End: Complemental strand, 21535771 - 21535569
Alignment:
Q  112 tttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgaggtggaagctctagaagggtcacg 211  Q
    ||||||||| |||||||||  ||||||||||||||||| ||  |  | || || ||||| |||||||||||| ||| ||||| | |   |||||| || |    
T  21535771 tttttggcgcattttcctgacttttacagtgttgatccaaatcccaactatattgaaaactatccggttgcaacgaagtggacgttactgaagggacatg 21535672  T
Q  212 -aggaggggg-tcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaaggagatccaggactttgag 309  Q
     || |||||| | | |||||||||| ||||||||  | | ||||||||||||||||| || ||| | || ||  |||||| |||||||||||  ||||||    
T  21535671 gagtaggggggtgatgtatcggtcattgcttgattatttgcagtttgatgacgtatgctgaaggtcgtatgaatagcacagggagatccagggttttgag 21535572  T
Q  310 gag 312  Q
    |||    
T  21535571 gag 21535569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 40887205 - 40887152
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgt 143  Q
    ||||||||||||||||| ||||||||||||| ||||| || | |||| ||||||    
T  40887205 tgtttggtttgtgcagggatggtttttggcgcatttttctcgttttttcagtgt 40887152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 325
Target Start/End: Complemental strand, 55279210 - 55279123
Alignment:
Q  238 cttgatcgtatacagtttgatgacg-tatgttggaggccttacgaggagcacaaggagatccaggactttgaggaggtcttctggtatt 325  Q
    ||||||||| | ||||||||||||| |||| |||||| | ||||| ||||||| ||| || ||||| ||||||||| | ||||||||||    
T  55279210 cttgatcgtttgcagtttgatgacgttatg-tggaggtcgtacgaagagcacagggacattcaggattttgaggagattttctggtatt 55279123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 31781229 - 31780981
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  31781229 tgtttgatttgtgcagacatggtttttggcgcattttcctaggttttacagtgttgatcccaacactgactacatggaaaactattcggttgcagcgagg 31781130  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| | |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31781129 tggaagctccaaaagggtcacggggacggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgctggaggccttacgaggagcaca 31781030  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||||||||||| | | |||||||||| ||| ||||||||    
T  31781029 gggagatccaggactttgaggggattttctggtattctggttggattat 31780981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 22526484 - 22526732
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||| | ||||||  ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22526484 tgtttggtttgtgcaggcatggtttttggtgcattttctagggttttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 22526583  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    |||| |||| |||||||||||| |||||||||||| ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||    
T  22526584 tggacgctccagaagggtcacggggagggggtcacatatcggtcactacttgatcgcatacagtttgatgacgtatgctggaggccttacgaggagcaca 22526683  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     ||||||| |||||||||||||||| |||| ||| | ||||||||||||    
T  22526684 tggagatctaggactttgaggaggttttctagtactctggctggattat 22526732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 47504823 - 47505071
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  47504823 tgtttggtttgtgcaggcatggtttctggcgcattttcctgggttttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 47504922  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  ||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||| |||||||    
T  47504923 tggaagcttcagaagggtcacggagagggggtcacgtatcggtcactgcttgatcgtataaagtttgattacgtatgatggaggccgtacgaagagcaca 47505022  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| ||||||||||| |||||||| |  |||||||||||    
T  47505023 gggagatccaggattttgaggaggttttctggtaatcaggctggattat 47505071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 19158502 - 19158750
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||| | | ||||||| ||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  19158502 tgtttggtttgtgcaggcatggttttttgtgcattttccagggttttacagtgttgatcccaacactgactacgtggaaaactatccggttgcagcgagg 19158601  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||    
T  19158602 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgcttgatcgtatacagttagatgatgtatgttggaggccgtacgaggagcaca 19158701  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  19158702 gagagatccaggacttcgaggaggttttctggtattctgggtggattat 19158750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 90 - 346
Target Start/End: Complemental strand, 95653 - 95408
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  95653 tgtttggtttgtgcaggcatgatttttggcgtattttcctgggttttacagtgttgatcccaacactgactacatggaaaactatccggtttcagcgagg 95554  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||||| ||||||||           |||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||    
T  95553 tggaagctccagaagggtcacggggaggggg-----------tcactgcttgatcgtatacaatttgatgacgtatgctggaggccttaagaggagcaca 95465  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattatctgtggtg 346  Q
     |||||||||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  95464 gggagatccaggactttgaggaggttttctggtattctggctggattatgtgtggtg 95408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 13637575 - 13637327
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  13637575 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 13637476  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  13637475 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 13637376  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  13637375 gagagatccaggacttcgaggaggttttctggtattctggatggattat 13637327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 50341718 - 50341470
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||  |||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| |||| |||||| ||||||    
T  50341718 tgtttggtttgtgcaaacatggtttttggcgcattttcctggcttttacagtgttgatcccaacactgactacatggaaaactatctggttgcggcgagg 50341619  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||||||    
T  50341618 tggaagcttcagaagggtcacggagagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgctagaggccgtacgaagagcaca 50341519  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| || |||||||| ||||||||||  |||||||||||    
T  50341518 gggagatccaggatttagaggaggttttctggtattcaggctggattat 50341470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 19522846 - 19522598
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||| ||||||| | ||||||||||| ||||||||||||||||||    
T  19522846 tgtttggtttgtgcaggcatgatttttggcgcattttcctggcttttacagtgttgatctcaacactaactacatggaaaactatccggttgcagcgagg 19522747  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  ||||||||||||  |||||||||| ||||||||||||| ||||||||||||| |||||||||||||| |||||||| ||||| |||||||    
T  19522746 tggaagcttcagaagggtcacggagagggggtcatgtatcggtcactgtttgatcgtatacaatttgatgacgtatgctggaggccgtacgaagagcaca 19522647  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      ||||| |||||  |||||||||| |||||||||| ||||||||||||    
T  19522646 gagagatacaggatattgaggaggttttctggtattctggctggattat 19522598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 3729919 - 3729671
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| | | ||| ||||||||||||||||||    
T  3729919 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctcggaaactatccggttgcagcgagg 3729820  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  3729819 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 3729720  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||| ||||| |||||||| |||||||||| ||| ||||||||    
T  3729719 gagagatccaagacttcgaggaggttttctggtattctggatggattat 3729671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 21143461 - 21143709
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| |||||||| | |||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||    
T  21143461 tgtttggtttgtgcagacatggtttttggcgcattttcctagcttttacagtgttgatcccaacactgactacatggaaaactatctggttgcagcgagg 21143560  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||| ||  | |||||||||   ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  21143561 tggaaacttcaaaagggtcacagagagggggtcacgtatcggtcactacttgatcgtatacagtttgatgacgtatgctggaggccgtacgaagagcaca 21143660  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     ||||||| |||| |||| | |||| |||||||||| ||||||||||||    
T  21143661 gggagatctaggattttgtgaaggttttctggtattctggctggattat 21143709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 26878198 - 26878446
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||||| |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  26878198 tgtttggtttgtgcaggcatggtttttggcgcatttttcagggtttttcagtattgatctcaacactgactacctggaaaactatccggttgcagcgagg 26878297  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  26878298 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 26878397  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||| ||||| |||||||| |||||||||| ||| ||||||||    
T  26878398 gagagatccatgacttcgaggaggttttctggtattctggatggattat 26878446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 45828058 - 45828306
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||| || || |||||||| | || |||||| ||||||    
T  45828058 tgtttggtttgtgcaggcatgatttttggcgcattttcctggcttttacagtgttgatcccaacaccgactatatggaaaactttctggttgcggcgagg 45828157  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  |||||||| || ||||| ||| ||||||||||||| ||||||||||||||||| |||||||| || || |||||||    
T  45828158 tggaagctacagaagggtcatggagagggggtgacatatcgctcattgcttgatcgtattcagtttgatgacgtatgctggaggccgtatgaagagcaca 45828257  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| ||||||||||| ||||||||||  |||||||||||    
T  45828258 gggagatccaggattttgaggaggttttctggtattcaggctggattat 45828306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 23273825 - 23273577
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||||||||| |||||||| ||| |||||  ||||||| ||||||||||||||  || ||||||||||| ||||  ||||| ||||||    
T  23273825 tgtttggtttgtgcaggcatggcttttggcgcattatcctgacttttacaatgttgatcccaacatcgactacatggaaaactatctagttgctgcgagg 23273726  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
     |||||||  |||||||||| |  |||||||||| ||||||||||||||||||||||||  |||||||||||||||| |||||||| ||||| |||||||    
T  23273725 aggaagcttcagaagggtcatggagagggggtcatgtatcggtcactgcttgatcgtatttagtttgatgacgtatgatggaggccgtacgaagagcaca 23273626  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||| ||||||||||| || |||||||  |||||||||||    
T  23273625 gggagatccaggattttgaggaggttttttggtattccggctggattat 23273577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 90 - 244
Target Start/End: Original strand, 52804403 - 52804557
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| |||||| ||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  52804403 tgtttggtttgtgcagacatggtttttggcgcattttcttggcttttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 52804502  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatc 244  Q
    ||||||||  ||||||||||||   ||||||||||||||||||||||||||||||    
T  52804503 tggaagcttcagaagggtcacggatagggggtcacgtatcggtcactgcttgatc 52804557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 172 - 338
Target Start/End: Original strand, 11196426 - 11196592
Alignment:
Q  172 tatccggttgcagcgaggtggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttgga 271  Q
    ||||||||||| ||||||||||||||  |||||||||| |  |||||||| || ||||| ||| ||||||||||||| ||||||||||||||||| ||||    
T  11196426 tatccggttgctgcgaggtggaagctacagaagggtcatggagagggggtgacatatcgctcattgcttgatcgtattcagtttgatgacgtatgctgga 11196525  T
Q  272 ggccttacgaggagcacaaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    |||| ||||| |||||||| || |||||||| ||||||||||| || |||||||  |||||||||||    
T  11196526 ggccgtacgaagagcacaaagaaatccaggattttgaggaggttttttggtattcaggctggattat 11196592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 90 - 325
Target Start/End: Complemental strand, 49855591 - 49855356
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||| |||| ||||| ||||||||| | ||||||  ||||||   ||||||||| |||||  | ||  | ||||| |  ||||||||||| |||    
T  49855591 tgtttggtttatgcaagcatgttttttggcgcactttcctaagttttatgttgttgatccaaacaccaactatgttgaaaacttaccggttgcagcaagg 49855492  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  |||||||||| |||||||||| |||||||||||||   |||||||||||||||||||||||| ||||| |||||||    
T  49855491 tggaagcttcagaagggtcatggagagggggtcatgtatcggtcattgcttgatcgtattacgtttgatgacgtatgttggaggccgtacgaagagcaca 49855392  T
Q  290 aggagatccaggactttgaggaggtcttctggtatt 325  Q
     |||  ||||||  || |||| ||| ||||||||||    
T  49855391 tggacttccaggctttcgagggggtattctggtatt 49855356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 214 - 346
Target Start/End: Original strand, 47660478 - 47660610
Alignment:
Q  214 gagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaaggagatccaggactttgaggagg 313  Q
    |||||| | |||||||| ||| ||||||||||||| ||||||||||||||||| |||||||| ||||| ||||||| |||||||||||  |||||||||     
T  47660478 gaggggttgacgtatcgctcattgcttgatcgtattcagtttgatgacgtatgatggaggccgtacgaagagcacagggagatccagggttttgaggaga 47660577  T
Q  314 tcttctggtattttggctggattatctgtggtg 346  Q
    | ||||||||||  |||||||||||||| ||||    
T  47660578 tattctggtattcaggctggattatctgcggtg 47660610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 209
Target Start/End: Original strand, 47658252 - 47658371
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||| ||||||||| |||||||||| |||| || ||||||||||||||| || || || ||||| || |||||||| ||||||    
T  47658252 tgtttggtttgtgcagacatgatttttggcgcattttcctggctttttcaatgttgatcccaacaccgactatattgaaaactacccggttgcggcgagg 47658351  T
Q  190 tggaagctctagaagggtca 209  Q
    ||||||||  ||||||||||    
T  47658352 tggaagctacagaagggtca 47658371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 325
Target Start/End: Complemental strand, 38120728 - 38120493
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||| ||| |||| ||||||||||||||  |||||||   ||||| |||||||||||| ||||| || ||  | ||||| | |||||||||  |||||    
T  38120728 tgtttgatttatgcaagcatggtttttggcccattttccgaagtttttcagtgttgatccaaacaccgactatgttgaaaactttccggttgcgacgagg 38120629  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||| | |   ||||| | |||||||| ||| || |||||||||| ||||||||||| ||||| |||||| | ||||| |||||||    
T  38120628 tggaagctacagaagggtaatggaaaggggttgacgtatcgctcattgtttgatcgtattcagtttgatgatgtatgctggaggtcgtacgaagagcaca 38120529  T
Q  290 aggagatccaggactttgaggaggtcttctggtatt 325  Q
      |||||| |||  ||||||||| | |||| |||||    
T  38120528 gtgagatctagggttttgaggagatattctagtatt 38120493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 281
Target Start/End: Original strand, 51325400 - 51325591
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||||||||  |||||||| ||||||||  ||||||   ||||||||  |||||  | |   | ||||| |  |||||| ||||||||    
T  51325400 tgtttggtttgtgcaggcatgacttttggcgcattttcctaagttttatgttgttgatcaaaacaccaagtttgttgaaaacttaccggttacagcgagg 51325499  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacga 281  Q
    || |||||  | |||||||| |  |||||||||| ||||||||||||||||||||||||   |||| ||||||||||||||||||| |||||    
T  51325500 tgaaagcttcataagggtcatggagagggggtcaagtatcggtcactgcttgatcgtattacgtttaatgacgtatgttggaggccgtacga 51325591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 97824 - 97767
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  97824 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 97767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3732253 - 3732196
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3732253 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 3732196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8473984 - 8474041
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8473984 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 8474041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 26875856 - 26875913
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26875856 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 26875913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 92 - 338
Target Start/End: Complemental strand, 35256827 - 35256588
Alignment:
Q  92 tttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgaggtg 191  Q
    ||||||||||||||||||||||||||||| | ||||||  ||||||   ||||||||| |||||  | ||  | |||||||| || ||||| || |||||    
T  35256827 tttggtttgtgcaggcatggtttttggcgcactttcctaagttttatgttgttgatccaaacaccaagtatgttgaaaatta-cccgttgctgcaaggtg 35256729  T
Q  192 gaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaag 291  Q
    ||||||  | |||||||| |  || ||||||||||||| ||||||||||||||||||   ||||||     ||||||||||| | |||||  |||||| |    
T  35256728 gaagcttcataagggtcatggaga-ggggtcacgtatcagtcactgcttgatcgtattacgtttga-----tatgttggaggtcgtacgaaaagcacagg 35256635  T
Q  292 gagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    ||  ||||||  || |||||||| ||||||||||  |||||||||||    
T  35256634 gacttccaggctttcgaggaggtattctggtattcaggctggattat 35256588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2365434 - 2365491
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  2365434 ccatttaatcacaagtaagtatgttgactcatttttaatcataatgttagtttgggta 2365491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19156212 - 19156269
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  19156212 ccatttaatcacaagtaagtatgttgactcatttttaatcataatgttagtttgggta 19156269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 21141224 - 21141277
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21141224 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttg 21141277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 38127365 - 38127312
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38127365 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttg 38127312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50343842 - 50343789
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  50343842 ccatttaatcacaagtaagtatcttgactcaattttaatcataatgttagtttg 50343789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 470364 - 470420
Alignment:
Q  2 catttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||| ||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  470364 catttaattacaagtaagtatcttgattcatttgtaatcataatgttagtttgggta 470420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 13639882 - 13639841
Alignment:
Q  17 aagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  13639882 aagtatcttgactcattttttatcataatgttagtttgggta 13639841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 168; Significance: 5e-90; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 103 - 338
Target Start/End: Original strand, 26439936 - 26440171
Alignment:
Q  103 caggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgaggtggaagctctaga 202  Q
    |||||||||||||| ||| |||||||||||||||| |||| ||||||||||||||| ||||||||||| |||| |||| | ||||||||||||||| |||    
T  26439936 caggcatggttttttgcgcattttcctgggttttatagtgatgatcccaacactgactacatggaaaactatctggttactgcgaggtggaagctccaga 26440035  T
Q  203 agggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaaggagatccagga 302  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  26440036 agggtcacggggagggggtcacgtatcggtcactgcttgatcgtatacaatttgatgacgtatgctggaggccttacgaggagcacaaggagatccatga 26440135  T
Q  303 ctttgaggaggtcttctggtattttggctggattat 338  Q
    |||||||||||| |||||||||| ||| ||||||||    
T  26440136 ctttgaggaggttttctggtattctggttggattat 26440171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 6203631 - 6203879
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  6203631 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 6203730  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  6203731 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 6203830  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  6203831 gagagatccaggacttcgaggaggttttctggtattctggatggattat 6203879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 11690598 - 11690846
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  11690598 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 11690697  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  11690698 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 11690797  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  11690798 gagagatccaggacttcgaggaggttttctggtattctggatggattat 11690846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 22303712 - 22303960
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  22303712 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 22303811  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  22303812 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 22303911  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  22303912 gagagatccaggacttcgaggaggttttctggtattctggatggattat 22303960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 30827193 - 30826945
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  30827193 tgtttggtttgtgcaggcatggtttttggcgcattttccagggtttttcagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 30827094  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||    
T  30827093 tggaagctccagaagggtcatggggaggggatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgaggagcaca 30826994  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  30826993 gagagatccaggacttcgaggaggttttctggtattctggatggattat 30826945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 31770556 - 31770804
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||| ||||| ||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  31770556 tgtttggtttgtgcatgcatgatttttggcgcattttcctggcttttacagtgttgatcccaacactgactacatggaaaactatccggttgcagcgagg 31770655  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  ||||||||||||  |||||||| |||||| ||||||| ||||||||||| ||||||||||||||||| | |||||| |||||||||||||    
T  31770656 tggaagcttcagaagggtcacggagagggggttacgtataggtcactacttgatcgtatgcagtttgatgacgtatgctagaggccgtacgaggagcaca 31770755  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||| || ||||||||||| || ||||||| ||||||||||||    
T  31770756 gagagatccatgattttgaggaggttttatggtattctggctggattat 31770804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 27638230 - 27638478
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||| |||||||||||||||||||||||| ||||||| |||||||  |||||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  27638230 tgtttgctttgtgcaggcatggtttttggcgcattttccagggttttttagtgttgatctcaacactgactacctggaaaactatccggttgcagcgagg 27638329  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||| | |||||||||| | ||||||  ||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||| ||||||    
T  27638330 tggaagcaccagaagggtcatggggagggaatcacgtatcggtcactgctcgatcgtatacagttagatgatgtatgctggaggccgtacgagaagcaca 27638429  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      |||||||||||||| |||||||| |||||||||| ||| ||||||||    
T  27638430 gagagatccaggacttcgaggaggttttctggtattctggatggattat 27638478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 3383911 - 3384159
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||  ||||| ||  |||||  ||||||||| | ||||| || ||  | ||||||| || |||||| ||||||    
T  3383911 tgtttggtttgtgcaggcatgatttttggcccatttttctaagttttttagtgttgattcaaacaccgactatgttgaaaattttcaggttgcggcgagg 3384010  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  |||||| | |||||||| ||| ||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||    
T  3384011 tggaagctacagaagggtcatggagaggggttgacgtatcgctcattgcttgatcgtattcagtttgatgacgtatgctggaggccgtacgaagagcaca 3384110  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
     |||||||||||  |||||| || | || |||||||  |||||||||||    
T  3384111 gggagatccagggttttgagaagatattatggtattcaggctggattat 3384159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 90 - 234
Target Start/End: Original strand, 26172429 - 26172573
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||| || ||||||||||| ||||| ||||| ||||||    
T  26172429 tgtttggtttgtgcagacatggtttttggcgcattttcctggcttttacagtgttgatcccaacaccgactacatggaaaactatccagttgcggcgagg 26172528  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtca 234  Q
    |||| |||  ||||||||||||  |||||| ||||||||||||||    
T  26172529 tggatgcttcagaagggtcacggagaggggatcacgtatcggtca 26172573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 214 - 338
Target Start/End: Original strand, 2406849 - 2406973
Alignment:
Q  214 gagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaaggagatccaggactttgaggagg 313  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||| | ||||| ||||||| ||||||||||||||||||| |||    
T  2406849 gagggggtcacgtatcgttcactgcttgatcgtattcagtttgatgacgaatgttggaggtcgtacgaagagcacagggagatccaggactttgagtagg 2406948  T
Q  314 tcttctggtattttggctggattat 338  Q
    | ||||||||||  |||||||||||    
T  2406949 ttttctggtattcaggctggattat 2406973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 32642374 - 32642622
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| | ||||||  ||||||   ||||||||| |||||  | ||  | ||||| |  |||||||  ||||||    
T  32642374 tgtttggtttgtgcaggcatggtttttggcgcactttcctaagttttatgttgttgatccaaacaccaaatatgttgaaaacttaccggttgtggcgagg 32642473  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  ||||| |||| ||||||||||||||||||||| ||   ||||||||||||||| |||||||| ||| | |||||||    
T  32642474 tggaagcttcagaagggtcatggagagggtgtcatgtatcggtcactgcttgatcgcattacgtttgatgacgtatgctggaggccgtacaaagagcaca 32642573  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      ||  ||||||  || |||||||| ||||||||||  ||||| |||||    
T  32642574 gagacttccaggctttcgaggaggtattctggtattcaggctgaattat 32642622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 24086391 - 24086143
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||||||||||||| | ||||||  ||||||   |||| |||| ||||   | ||  | ||||| |  | |||||| ||||||    
T  24086391 tgtttggtttgtgcaggcatggtttttggcgcactttcctcagttttatgttgtttatccaaacatcaactatgttgaaaacttactggttgcggcgagg 24086292  T
Q  190 tggaagctctagaagggtcacgaggagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcaca 289  Q
    ||||||||  |||||||||| |  ||||||||||| ||||||||| |||||||| ||||   ||||||||||||||| |||||| | ||||| |||||||    
T  24086291 tggaagcttcagaagggtcatggagagggggtcacatatcggtcattgcttgattgtattacgtttgatgacgtatgctggaggtcgtacgaagagcaca 24086192  T
Q  290 aggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
      ||  | ||||  || |||||||| ||||||||||  || ||||||||    
T  24086191 gtgactttcaggctttcgaggaggtattctggtattcaggatggattat 24086143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 6201346 - 6201403
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6201346 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 6201403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11688313 - 11688370
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11688313 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 11688370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 30829526 - 30829469
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30829526 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttagtttgggta 30829469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3501349 - 3501406
Alignment:
Q  1 ccatttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  3501349 ccatttaatcacaagcaagtatcttgactcatttttaatcataatgttagtttgggta 3501406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 214 - 346
Target Start/End: Complemental strand, 18005890 - 18005758
Alignment:
Q  214 gagggggtcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcacaaggagatccaggactttgaggagg 313  Q
    ||||||||||||||||||||| |||||||||||||   |||||||||||||||  ||||||| ||||| ||||||| |||  |||| |  || |||||||    
T  18005890 gagggggtcacgtatcggtcattgcttgatcgtattacgtttgatgacgtatgcaggaggccgtacgaagagcacagggacttccaagctttcgaggagg 18005791  T
Q  314 tcttctggtattttggctggattatctgtggtg 346  Q
    | |||| |||||  ||||||||||  |||||||    
T  18005790 tattctagtattcaggctggattacgtgtggtg 18005758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 27616914 - 27616970
Alignment:
Q  2 catttaatcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  27616914 catttaaacacaagtaagtatgttgactcatttttaatcataatgttagtttgggta 27616970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 26423196 - 26423245
Alignment:
Q  9 tcacaagtaagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  26423196 tcacaagttagtatcttgactcatttttaatcataatgttagtttgggta 26423245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 338
Target Start/End: Original strand, 26172573 - 26172640
Alignment:
Q  271 aggccttacgaggagcacaaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    ||||| ||||| ||||| | |||||||||||| ||||||||||| ||||||||||  |||||||||||    
T  26172573 aggccgtacgaagagcatacggagatccaggattttgaggaggttttctggtattcaggctggattat 26172640  T

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Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 58
Target Start/End: Original strand, 22301395 - 22301436
Alignment:
Q  17 aagtatcttgactcatttttaatcataatgttaatttgggta 58  Q
    |||||||||||||||||||| |||||||||||| ||||||||    
T  22301395 aagtatcttgactcattttttatcataatgttagtttgggta 22301436  T

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Target: scaffold0155 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 90 - 338
Target Start/End: Original strand, 11831 - 12080
Alignment:
Q  90 tgtttggtttgtgcaggcatggtttttggcgtattttcctgggttttacagtgttgatcccaacactgattacatggaaaattatccggttgcagcgagg 189  Q
    ||||||||||||||||||||| ||||||||  ||||| |   |||||| ||||||||||| ||||| || ||  | ||||| |  | |||||| ||||||    
T  11831 tgtttggtttgtgcaggcatgatttttggctcatttttcgaagttttatagtgttgatccaaacaccgactatgttgaaaacttactggttgcggcgagg 11930  T
Q  190 tggaagctctagaagggtcacgaggaggggg-tcacgtatcggtcactgcttgatcgtatacagtttgatgacgtatgttggaggccttacgaggagcac 288  Q
    ||||||||  |||||||||| |  ||||||| | |||||||||||| || ||||| ||||   |||||||||||||||||||||||| ||||| ||||||    
T  11931 tggaagcttcagaagggtcatggagaggggggtgacgtatcggtcattggttgatggtattacgtttgatgacgtatgttggaggccgtacgaagagcac 12030  T
Q  289 aaggagatccaggactttgaggaggtcttctggtattttggctggattat 338  Q
    | |||||||||||  |||||||| || ||||||||||  |||||||||||    
T  12031 agggagatccaggcttttgaggacgtattctggtattcaggctggattat 12080  T

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Target: scaffold0877 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 4523 - 4477
Alignment:
Q  8 atcacaagtaagtatcttgactcatttttaatcataatgttaatttg 54  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||    
T  4523 atcacaagtaagtaccttgactcatttttaatcataatgttagtttg 4477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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