View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20527_high_4 (Length: 266)
Name: NF20527_high_4
Description: NF20527
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20527_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 13001335 - 13001086
Alignment:
| Q |
1 |
cactcacaagaaaaccgatgaacgataacgatgacctcagaaacaccgtattgctgcatttcacacgaattcttccaaacagccaccgcaaacccaaaca |
100 |
Q |
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| T |
13001335 |
cactcacaagaaaacagatgaacgataactatgacctcagaaacaccgtattgctgcatttcacacgaattcttccaaacagccaccgcaaacccaaaca |
13001236 |
T |
|
| Q |
101 |
aaatcgccgtaatccacgcttccggcgtcgccaacctttcccgccaaaattccacctccccaaacttcaaccaagacttcaccacgctcttacaacagcg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13001235 |
aaatcgccgtaatccacgcttccggcgtcgccaacctttcccgccaaaattccacctccccaaacttcaaccaagacttcaccacgctcttacaacagcg |
13001136 |
T |
|
| Q |
201 |
cgtcgattnnnnnnnnnngccgttctaccacggtgaccgttctttcactt |
250 |
Q |
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|||||||| |||||||||||||||||||||||||||||||| |
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| T |
13001135 |
cgtcgattccacctccccgccgttctaccacggtgaccgttctttcactt |
13001086 |
T |
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