View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20528_low_10 (Length: 225)
Name: NF20528_low_10
Description: NF20528
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20528_low_10 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 6 - 225
Target Start/End: Original strand, 8467885 - 8468104
Alignment:
| Q |
6 |
tcatttccttcacaggtttaggctccaccggcatttcaacatcatcaacttctccggaagcagacataactaatgaaacttttttactgagtagtgagtt |
105 |
Q |
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| T |
8467885 |
tcatttccttcacaggtttaggctccaccggcatttcaacatcatcaacttctccggaagcagacataactaatgaaacttttttactgagtagtgagtt |
8467984 |
T |
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| Q |
106 |
agatgaaacggtaacttgtgttaaatagttagataataattagtttgctattggtagagtccagtgatggaggttgccaacgtggcaaagagatatcaag |
205 |
Q |
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| T |
8467985 |
agatgaaacggtaacttgtgttaaatagtaagataataattagtttgctattggtagagtccagtgatggaggttgccaacgtggcaaagagatatcaag |
8468084 |
T |
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| Q |
206 |
aacgtacacgtggtgtcaat |
225 |
Q |
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| T |
8468085 |
aacgtacacgtggtgtcaat |
8468104 |
T |
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