View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20530_high_23 (Length: 287)
Name: NF20530_high_23
Description: NF20530
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20530_high_23 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 79 - 274
Target Start/End: Original strand, 15559473 - 15559668
Alignment:
| Q |
79 |
cgaaattgaaagtggagagtttacctctatgcttaattacatcattagcaacaaaactagcttcgaatttgtgtttaggaataatccaaaagattacaga |
178 |
Q |
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| T |
15559473 |
cgaaattgaaagtggagagtttacctctatgcttaattacatcattagcaacaaaactagcttcgaaattgtgtttaggaataatccaaaagattacaga |
15559572 |
T |
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| Q |
179 |
aacgaaagccgctaaactgaaaaagagaatgaataaacacttgaaactgaaagctcttcgaatcaccgaacaccgtgcaccttcatcgtcttgcct |
274 |
Q |
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| T |
15559573 |
aacgaaagccgctaaactgaaaaagagaatgaataaacacttgaaactgaaagctcttcgaatgaccgaacaccgtgcaccttcatcgtcttgcct |
15559668 |
T |
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