View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20532_high_3 (Length: 348)

Name: NF20532_high_3
Description: NF20532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20532_high_3
NF20532_high_3
[»] chr6 (47 HSPs)
chr6 (34-335)||(1240524-1240825)
chr6 (241-335)||(1172119-1172213)
chr6 (49-203)||(32675818-32675971)
chr6 (31-203)||(10755194-10755362)
chr6 (21-138)||(1172410-1172535)
chr6 (51-203)||(6776812-6776963)
chr6 (48-203)||(23239251-23239405)
chr6 (48-133)||(6752885-6752970)
chr6 (27-203)||(2027084-2027258)
chr6 (46-203)||(6758631-6758788)
chr6 (46-134)||(32165187-32165275)
chr6 (48-196)||(2040109-2040261)
chr6 (31-203)||(8014792-8014963)
chr6 (31-133)||(9202310-9202412)
chr6 (52-203)||(21891270-21891420)
chr6 (45-203)||(2034154-2034311)
chr6 (46-203)||(2255738-2255895)
chr6 (64-203)||(25430710-25430845)
chr6 (31-135)||(35071339-35071443)
chr6 (31-203)||(7267779-7267957)
chr6 (31-203)||(21871195-21871365)
chr6 (146-203)||(21025252-21025309)
chr6 (37-133)||(9201638-9201734)
chr6 (146-197)||(24625861-24625912)
chr6 (60-134)||(22708358-22708432)
chr6 (146-203)||(3211026-3211083)
chr6 (146-203)||(10054385-10054442)
chr6 (37-203)||(10687311-10687478)
chr6 (146-203)||(12817117-12817174)
chr6 (146-203)||(30533984-30534041)
chr6 (46-134)||(1189455-1189543)
chr6 (46-203)||(29052337-29052492)
chr6 (46-203)||(29623404-29623559)
chr6 (48-134)||(34223452-34223539)
chr6 (41-126)||(12816822-12816908)
chr6 (46-134)||(32615341-32615429)
chr6 (25-182)||(6958649-6958804)
chr6 (146-197)||(9894776-9894827)
chr6 (51-134)||(9894847-9894930)
chr6 (47-134)||(17300681-17300768)
chr6 (32-91)||(20776469-20776528)
chr6 (48-134)||(10184258-10184344)
chr6 (146-203)||(6632663-6632720)
chr6 (158-203)||(9201768-9201813)
chr6 (46-134)||(1468246-1468333)
chr6 (46-134)||(4808643-4808731)
chr6 (37-65)||(7446780-7446808)
[»] chr1 (71 HSPs)
chr1 (22-197)||(4068125-4068299)
chr1 (31-203)||(48819303-48819474)
chr1 (31-202)||(37712073-37712242)
chr1 (31-195)||(15515258-15515421)
chr1 (42-197)||(16888891-16889041)
chr1 (41-202)||(37329333-37329493)
chr1 (31-203)||(45267469-45267637)
chr1 (46-197)||(13038957-13039107)
chr1 (31-190)||(28690021-28690179)
chr1 (31-197)||(26988158-26988323)
chr1 (22-192)||(41196612-41196781)
chr1 (61-196)||(6337697-6337831)
chr1 (31-203)||(35897530-35897705)
chr1 (86-203)||(3069820-3069936)
chr1 (48-202)||(46689478-46689631)
chr1 (54-134)||(31249754-31249834)
chr1 (31-196)||(41130005-41130169)
chr1 (31-196)||(1565286-1565457)
chr1 (41-203)||(35590134-35590296)
chr1 (48-203)||(36422909-36423063)
chr1 (48-197)||(9572712-9572861)
chr1 (31-203)||(10082254-10082426)
chr1 (47-203)||(32497199-32497353)
chr1 (31-196)||(26946015-26946180)
chr1 (31-135)||(28870274-28870378)
chr1 (38-203)||(1005344-1005508)
chr1 (41-202)||(10365176-10365335)
chr1 (27-134)||(26435082-26435189)
chr1 (31-195)||(47413385-47413547)
chr1 (146-203)||(18327528-18327585)
chr1 (54-134)||(8061943-8062023)
chr1 (46-134)||(8410205-8410293)
chr1 (46-134)||(17814262-17814350)
chr1 (146-197)||(10850096-10850147)
chr1 (47-134)||(17628352-17628439)
chr1 (37-130)||(391251-391345)
chr1 (48-134)||(42591454-42591540)
chr1 (47-132)||(15791457-15791542)
chr1 (146-203)||(31378776-31378833)
chr1 (46-134)||(14460967-14461055)
chr1 (46-134)||(15235087-15235175)
chr1 (46-134)||(16708871-16708958)
chr1 (46-134)||(25485820-25485908)
chr1 (65-203)||(35282539-35282676)
chr1 (31-131)||(42367026-42367125)
chr1 (47-134)||(5347226-5347313)
chr1 (79-134)||(12256678-12256733)
chr1 (79-134)||(19284970-19285025)
chr1 (48-134)||(19395846-19395932)
chr1 (146-203)||(26936863-26936919)
chr1 (46-134)||(17348950-17349038)
chr1 (46-134)||(19220245-19220333)
chr1 (157-197)||(39941380-39941420)
chr1 (157-197)||(39941451-39941491)
chr1 (46-196)||(46473105-46473254)
chr1 (157-203)||(391172-391219)
chr1 (47-134)||(3115989-3116076)
chr1 (160-203)||(22593446-22593489)
chr1 (79-203)||(41003391-41003514)
chr1 (165-203)||(20169268-20169306)
chr1 (48-134)||(41576323-41576409)
chr1 (79-125)||(49822817-49822863)
chr1 (146-203)||(1265718-1265775)
chr1 (42-127)||(9575407-9575492)
chr1 (146-203)||(15631908-15631965)
chr1 (53-134)||(22103181-22103262)
chr1 (146-179)||(23544819-23544852)
chr1 (146-203)||(51409732-51409789)
chr1 (165-197)||(8410159-8410191)
chr1 (50-134)||(22593337-22593421)
chr1 (157-197)||(39941520-39941560)
[»] chr4 (86 HSPs)
chr4 (28-203)||(48591332-48591506)
chr4 (31-184)||(17222852-17223004)
chr4 (42-203)||(23297442-23297599)
chr4 (31-203)||(12495555-12495728)
chr4 (22-203)||(28074369-28074548)
chr4 (31-203)||(36740908-36741079)
chr4 (22-202)||(29877644-29877825)
chr4 (24-203)||(38345727-38345903)
chr4 (48-193)||(41228917-41229061)
chr4 (31-203)||(7148776-7148946)
chr4 (31-203)||(23335646-23335817)
chr4 (51-191)||(46704201-46704340)
chr4 (31-203)||(488295-488466)
chr4 (31-196)||(948083-948250)
chr4 (31-134)||(48687006-48687108)
chr4 (39-203)||(896974-897137)
chr4 (28-192)||(32628793-32628956)
chr4 (31-203)||(42611779-42611950)
chr4 (53-202)||(18424211-18424358)
chr4 (46-187)||(18630821-18630961)
chr4 (32-135)||(36254948-36255051)
chr4 (41-138)||(2330394-2330491)
chr4 (20-135)||(22273851-22273967)
chr4 (41-134)||(34526258-34526351)
chr4 (146-203)||(43699508-43699565)
chr4 (46-134)||(4603258-4603346)
chr4 (46-126)||(9153508-9153588)
chr4 (46-134)||(15179889-15179977)
chr4 (46-133)||(19725366-19725454)
chr4 (47-134)||(39931471-39931558)
chr4 (47-134)||(42617157-42617244)
chr4 (46-132)||(11298656-11298742)
chr4 (31-129)||(42153073-42153171)
chr4 (146-203)||(35124391-35124448)
chr4 (100-203)||(52274100-52274202)
chr4 (46-134)||(15184618-15184706)
chr4 (31-135)||(41071421-41071525)
chr4 (42-138)||(43213437-43213532)
chr4 (31-135)||(48667741-48667845)
chr4 (116-203)||(1374358-1374445)
chr4 (146-196)||(3564231-3564281)
chr4 (31-97)||(3564315-3564381)
chr4 (153-203)||(8130492-8130542)
chr4 (51-125)||(8130560-8130634)
chr4 (146-184)||(21216353-21216391)
chr4 (80-134)||(22303167-22303221)
chr4 (157-203)||(27368188-27368234)
chr4 (95-203)||(39932729-39932836)
chr4 (40-126)||(43699369-43699455)
chr4 (146-203)||(212973-213029)
chr4 (31-76)||(23297406-23297451)
chr4 (31-174)||(28663606-28663747)
chr4 (38-135)||(35405755-35405851)
chr4 (24-137)||(48721889-48722002)
chr4 (46-134)||(2547973-2548061)
chr4 (146-194)||(4331350-4331398)
chr4 (153-197)||(8057120-8057164)
chr4 (46-134)||(19414187-19414275)
chr4 (46-134)||(22117425-22117513)
chr4 (160-196)||(29615385-29615421)
chr4 (46-134)||(47202897-47202985)
chr4 (157-197)||(48686959-48686999)
chr4 (25-76)||(1374436-1374487)
chr4 (47-134)||(11679054-11679141)
chr4 (47-134)||(11687333-11687420)
chr4 (32-197)||(18258021-18258178)
chr4 (79-134)||(23284750-23284805)
chr4 (48-138)||(2702643-2702733)
chr4 (57-135)||(11256598-11256676)
chr4 (160-202)||(29996678-29996720)
chr4 (41-103)||(30956787-30956849)
chr4 (146-196)||(35010222-35010272)
chr4 (22-76)||(35124346-35124400)
chr4 (37-91)||(40699330-40699384)
chr4 (160-202)||(55638120-55638162)
chr4 (146-203)||(825686-825743)
chr4 (158-195)||(38515689-38515726)
chr4 (52-105)||(38876054-38876107)
chr4 (160-197)||(43415328-43415365)
chr4 (30-130)||(4331406-4331506)
chr4 (146-186)||(29997335-29997375)
chr4 (146-197)||(30956692-30956744)
chr4 (86-138)||(34633459-34633510)
chr4 (31-63)||(43699569-43699601)
chr4 (147-203)||(43983408-43983464)
chr4 (166-202)||(46650276-46650312)
[»] chr2 (56 HSPs)
chr2 (22-197)||(33321214-33321388)
chr2 (38-203)||(4026930-4027093)
chr2 (31-189)||(36501426-36501583)
chr2 (31-203)||(887416-887587)
chr2 (48-204)||(21788460-21788615)
chr2 (41-203)||(25836634-25836794)
chr2 (40-203)||(4004823-4004985)
chr2 (31-197)||(8832464-8832632)
chr2 (37-182)||(38216044-38216188)
chr2 (46-185)||(39592271-39592407)
chr2 (23-203)||(29774749-29774928)
chr2 (41-183)||(4533346-4533487)
chr2 (48-203)||(11776988-11777142)
chr2 (42-138)||(7480821-7480917)
chr2 (46-134)||(8441530-8441618)
chr2 (31-202)||(13056238-13056408)
chr2 (54-134)||(35515429-35515509)
chr2 (105-197)||(755726-755818)
chr2 (146-203)||(33321428-33321485)
chr2 (146-203)||(34913415-34913472)
chr2 (46-196)||(15155824-15155973)
chr2 (46-134)||(22898283-22898371)
chr2 (31-203)||(5903537-5903713)
chr2 (87-203)||(12238453-12238565)
chr2 (146-203)||(2790095-2790153)
chr2 (153-203)||(4090493-4090543)
chr2 (146-203)||(11072949-11073007)
chr2 (105-197)||(12223862-12223953)
chr2 (46-132)||(32521972-32522058)
chr2 (48-134)||(38471719-38471805)
chr2 (58-194)||(42839259-42839393)
chr2 (31-76)||(2790144-2790189)
chr2 (31-76)||(5903745-5903790)
chr2 (156-197)||(35731148-35731189)
chr2 (22-103)||(37420009-37420090)
chr2 (158-202)||(12683643-12683687)
chr2 (163-203)||(27703500-27703540)
chr2 (158-202)||(29133704-29133748)
chr2 (146-189)||(12442831-12442874)
chr2 (38-69)||(37409780-37409811)
chr2 (117-202)||(43787800-43787884)
chr2 (48-134)||(446499-446585)
chr2 (28-62)||(14365230-14365264)
chr2 (53-134)||(2401555-2401636)
chr2 (17-74)||(12442934-12442991)
chr2 (22-114)||(22422071-22422163)
chr2 (166-203)||(41554625-41554662)
chr2 (22-135)||(42382691-42382804)
chr2 (27-76)||(43787739-43787788)
chr2 (159-191)||(27243575-27243607)
chr2 (46-130)||(30382195-30382279)
chr2 (146-202)||(37419989-37420044)
chr2 (32-137)||(38010582-38010689)
chr2 (86-134)||(40301431-40301479)
chr2 (153-197)||(42382622-42382666)
chr2 (79-127)||(44475478-44475526)
[»] chr8 (47 HSPs)
chr8 (45-203)||(32975691-32975848)
chr8 (41-196)||(34286485-34286638)
chr8 (43-203)||(32131444-32131603)
chr8 (41-202)||(24350440-24350600)
chr8 (31-203)||(28879062-28879230)
chr8 (31-202)||(10298838-10299007)
chr8 (31-197)||(16972267-16972433)
chr8 (51-203)||(9131059-9131210)
chr8 (31-203)||(32212926-32213104)
chr8 (31-135)||(10213766-10213870)
chr8 (46-203)||(41145322-41145480)
chr8 (48-203)||(19925561-19925715)
chr8 (46-134)||(29218177-29218265)
chr8 (146-192)||(35168466-35168512)
chr8 (46-132)||(37410839-37410925)
chr8 (48-203)||(2669652-2669806)
chr8 (157-202)||(13265489-13265534)
chr8 (146-203)||(35453414-35453471)
chr8 (46-134)||(35055494-35055581)
chr8 (46-203)||(38895663-38895819)
chr8 (46-137)||(9788879-9788969)
chr8 (54-137)||(25333635-25333718)
chr8 (47-134)||(38338778-38338865)
chr8 (50-194)||(14942437-14942580)
chr8 (46-132)||(42102180-42102266)
chr8 (46-135)||(24866877-24866966)
chr8 (146-202)||(1089018-1089074)
chr8 (46-134)||(11988268-11988356)
chr8 (46-134)||(12607151-12607239)
chr8 (158-202)||(13131435-13131479)
chr8 (31-87)||(15763207-15763263)
chr8 (54-138)||(25465781-25465865)
chr8 (46-114)||(28280801-28280869)
chr8 (31-69)||(10480029-10480067)
chr8 (23-76)||(32131400-32131453)
chr8 (146-203)||(35285932-35285989)
chr8 (46-138)||(14262394-14262486)
chr8 (160-203)||(19327871-19327914)
chr8 (48-138)||(9782251-9782340)
chr8 (31-69)||(11460785-11460823)
chr8 (165-203)||(29243107-29243145)
chr8 (48-138)||(32924139-32924230)
chr8 (65-138)||(9130962-9131035)
chr8 (31-68)||(11460841-11460878)
chr8 (31-128)||(24087249-24087346)
chr8 (168-197)||(34102733-34102762)
chr8 (146-202)||(14709561-14709617)
[»] chr7 (54 HSPs)
chr7 (31-203)||(29390462-29390632)
chr7 (22-203)||(29378649-29378829)
chr7 (37-203)||(34922935-34923102)
chr7 (48-203)||(44613401-44613555)
chr7 (40-197)||(14691219-14691376)
chr7 (31-203)||(47511047-47511220)
chr7 (31-203)||(38372562-38372733)
chr7 (41-202)||(20888578-20888739)
chr7 (28-197)||(30181560-30181727)
chr7 (31-135)||(33287986-33288090)
chr7 (46-203)||(22032766-22032922)
chr7 (46-134)||(1312185-1312273)
chr7 (31-134)||(25908366-25908469)
chr7 (79-202)||(48021607-48021728)
chr7 (146-203)||(41037757-41037813)
chr7 (48-125)||(43818806-43818883)
chr7 (46-134)||(991571-991659)
chr7 (31-134)||(40629344-40629446)
chr7 (31-125)||(33204915-33205009)
chr7 (48-134)||(47654342-47654428)
chr7 (104-202)||(41094223-41094318)
chr7 (46-204)||(22575589-22575746)
chr7 (31-137)||(18765022-18765129)
chr7 (51-134)||(23137094-23137177)
chr7 (156-203)||(33288134-33288181)
chr7 (47-130)||(49104295-49104378)
chr7 (37-115)||(5947669-5947747)
chr7 (47-134)||(24371353-24371436)
chr7 (48-204)||(35809093-35809248)
chr7 (31-178)||(39279458-39279605)
chr7 (153-203)||(40629449-40629498)
chr7 (48-134)||(44799474-44799560)
chr7 (146-202)||(7098125-7098181)
chr7 (46-134)||(7774673-7774761)
chr7 (51-131)||(16012773-16012853)
chr7 (153-197)||(18837232-18837276)
chr7 (41-97)||(25655674-25655730)
chr7 (41-124)||(32848612-32848696)
chr7 (147-203)||(41677378-41677434)
chr7 (47-134)||(16932857-16932944)
chr7 (47-134)||(16938240-16938327)
chr7 (47-134)||(16958887-16958974)
chr7 (47-134)||(35246741-35246828)
chr7 (146-197)||(48895306-48895357)
chr7 (169-203)||(1054116-1054150)
chr7 (165-203)||(21249160-21249198)
chr7 (146-196)||(23356516-23356566)
chr7 (50-185)||(37465816-37465951)
chr7 (161-203)||(41094151-41094193)
chr7 (146-196)||(42083442-42083492)
chr7 (31-76)||(18704307-18704352)
chr7 (46-134)||(19914017-19914105)
chr7 (41-97)||(22515463-22515519)
chr7 (156-196)||(24414534-24414574)
[»] chr3 (56 HSPs)
chr3 (37-203)||(40580993-40581159)
chr3 (46-203)||(40240503-40240659)
chr3 (31-195)||(53217952-53218114)
chr3 (31-203)||(43079845-43080016)
chr3 (31-203)||(22809104-22809276)
chr3 (31-202)||(585025-585194)
chr3 (28-197)||(48597774-48597943)
chr3 (31-138)||(20685853-20685960)
chr3 (100-203)||(52021250-52021353)
chr3 (48-196)||(32901076-32901223)
chr3 (146-197)||(52421166-52421217)
chr3 (52-196)||(34707645-34707788)
chr3 (31-197)||(3845865-3846030)
chr3 (46-134)||(17752057-17752145)
chr3 (46-134)||(19053377-19053465)
chr3 (105-195)||(29270373-29270462)
chr3 (46-134)||(29614265-29614353)
chr3 (42-138)||(52895327-52895423)
chr3 (86-203)||(3870192-3870308)
chr3 (79-203)||(1516057-1516179)
chr3 (46-132)||(3645376-3645462)
chr3 (46-132)||(21720981-21721067)
chr3 (79-197)||(42956138-42956255)
chr3 (46-196)||(43971773-43971922)
chr3 (146-197)||(10521164-10521215)
chr3 (146-197)||(10667408-10667459)
chr3 (46-203)||(51409397-51409552)
chr3 (47-134)||(29830564-29830653)
chr3 (48-138)||(33946478-33946568)
chr3 (46-196)||(3876189-3876338)
chr3 (146-202)||(5129840-5129896)
chr3 (41-97)||(32983212-32983268)
chr3 (46-134)||(37243538-37243626)
chr3 (29-128)||(53261676-53261776)
chr3 (46-132)||(20894576-20894662)
chr3 (31-109)||(46573365-46573443)
chr3 (54-197)||(47403696-47403839)
chr3 (117-203)||(24842104-24842189)
chr3 (37-130)||(30321647-30321739)
chr3 (61-196)||(45331236-45331370)
chr3 (46-138)||(20174866-20174958)
chr3 (47-203)||(4257225-4257383)
chr3 (162-197)||(10272132-10272167)
chr3 (42-109)||(31787619-31787686)
chr3 (47-134)||(37778205-37778292)
chr3 (157-203)||(7292684-7292730)
chr3 (48-134)||(25341342-25341428)
chr3 (146-195)||(29002726-29002773)
chr3 (148-202)||(36266249-36266303)
chr3 (48-134)||(38524160-38524246)
chr3 (31-69)||(50540426-50540464)
chr3 (146-203)||(10448778-10448835)
chr3 (27-76)||(53261820-53261869)
chr3 (146-202)||(21296771-21296827)
chr3 (170-202)||(23555489-23555521)
chr3 (78-134)||(29830716-29830772)
[»] chr5 (71 HSPs)
chr5 (37-203)||(28625484-28625648)
chr5 (31-202)||(12467269-12467443)
chr5 (37-202)||(29922106-29922270)
chr5 (31-195)||(1868858-1869016)
chr5 (39-203)||(41059708-41059871)
chr5 (22-191)||(40452379-40452548)
chr5 (31-197)||(1576641-1576806)
chr5 (31-197)||(1608009-1608174)
chr5 (26-192)||(31636997-31637165)
chr5 (42-203)||(42852026-42852185)
chr5 (45-203)||(24030219-24030375)
chr5 (31-203)||(40697005-40697181)
chr5 (37-184)||(5559836-5559985)
chr5 (40-173)||(2577348-2577481)
chr5 (22-196)||(22201833-22202011)
chr5 (31-203)||(10537137-10537301)
chr5 (28-202)||(41534628-41534806)
chr5 (86-203)||(13060568-13060684)
chr5 (31-203)||(35536846-35537019)
chr5 (40-134)||(1943067-1943161)
chr5 (56-203)||(13625456-13625603)
chr5 (146-203)||(1473360-1473417)
chr5 (46-196)||(6144749-6144898)
chr5 (64-203)||(17657246-17657384)
chr5 (46-134)||(29659132-29659220)
chr5 (41-196)||(14243834-14243990)
chr5 (146-203)||(12987039-12987096)
chr5 (31-196)||(6125298-6125461)
chr5 (46-134)||(29418678-29418766)
chr5 (147-203)||(42706800-42706856)
chr5 (39-195)||(11912021-11912176)
chr5 (31-114)||(41125766-41125849)
chr5 (48-137)||(7565192-7565281)
chr5 (146-203)||(43268646-43268703)
chr5 (46-134)||(26003069-26003157)
chr5 (79-177)||(41419531-41419628)
chr5 (65-197)||(7364254-7364385)
chr5 (47-134)||(16722098-16722185)
chr5 (31-134)||(39154672-39154775)
chr5 (37-96)||(42558634-42558693)
chr5 (146-203)||(17128282-17128339)
chr5 (48-132)||(9477410-9477494)
chr5 (31-203)||(2878587-2878758)
chr5 (146-197)||(3977485-3977536)
chr5 (28-135)||(7364075-7364182)
chr5 (47-134)||(20458485-20458572)
chr5 (27-66)||(22573779-22573818)
chr5 (31-122)||(35083323-35083414)
chr5 (46-196)||(38461206-38461357)
chr5 (153-203)||(1943014-1943064)
chr5 (28-134)||(2670132-2670237)
chr5 (31-129)||(11163193-11163291)
chr5 (21-197)||(11706812-11706994)
chr5 (147-197)||(43265967-43266017)
chr5 (42-137)||(589221-589317)
chr5 (146-202)||(2670080-2670136)
chr5 (148-196)||(3520530-3520577)
chr5 (160-196)||(11991316-11991352)
chr5 (31-134)||(27805987-27806091)
chr5 (27-135)||(29136731-29136841)
chr5 (157-203)||(7984109-7984155)
chr5 (146-196)||(11163294-11163344)
chr5 (31-97)||(17868115-17868181)
chr5 (146-203)||(17868201-17868259)
chr5 (147-184)||(6150400-6150437)
chr5 (31-76)||(13739359-13739404)
chr5 (146-203)||(25332263-25332320)
chr5 (31-135)||(6150863-6150966)
chr5 (118-191)||(18602618-18602691)
chr5 (146-202)||(26003002-26003058)
chr5 (46-134)||(40152802-40152890)
[»] scaffold0157 (1 HSPs)
scaffold0157 (31-203)||(24749-24922)
[»] scaffold1367 (1 HSPs)
scaffold1367 (46-203)||(1062-1218)
[»] scaffold0299 (1 HSPs)
scaffold0299 (46-203)||(11227-11382)
[»] scaffold0041 (2 HSPs)
scaffold0041 (104-202)||(108978-109073)
scaffold0041 (161-203)||(109103-109145)
[»] scaffold0024 (1 HSPs)
scaffold0024 (146-203)||(97231-97288)
[»] scaffold0012 (1 HSPs)
scaffold0012 (46-203)||(178504-178662)
[»] scaffold0512 (1 HSPs)
scaffold0512 (48-196)||(4076-4222)
[»] scaffold0332 (1 HSPs)
scaffold0332 (165-203)||(14790-14828)
[»] scaffold0057 (2 HSPs)
scaffold0057 (153-203)||(24421-24470)
scaffold0057 (147-197)||(43842-43892)
[»] scaffold1130 (1 HSPs)
scaffold1130 (54-132)||(2325-2403)
[»] scaffold0004 (2 HSPs)
scaffold0004 (60-195)||(227718-227853)
scaffold0004 (52-134)||(242572-242654)
[»] scaffold0027 (1 HSPs)
scaffold0027 (146-203)||(142343-142400)
[»] scaffold0048 (1 HSPs)
scaffold0048 (46-134)||(59339-59427)


Alignment Details
Target: chr6 (Bit Score: 265; Significance: 1e-148; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 34 - 335
Target Start/End: Original strand, 1240524 - 1240825
Alignment:
Q  34 gggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcata 133  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1240524 gggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaatcgtatcttcata 1240623  T
Q  134 agttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataagaagaagttgatgtcaacaataaacagcaaa 233  Q
    |||||       | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1240624 agttgtttttttcgtaaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataagaagaagttgatgtcaacaataaacagcaaa 1240723  T
Q  234 agaagttaaatgctataaaatagttgatctaaagaaggaaagattaaacctttaagctaaacttagttacccagtttttgactaagtgaataatggatag 333  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1240724 agaagttaaatgctataaaatagttgatctaaagaaggaaagatcaaacctttaagctaaacttagttacccagttcttgactaagtgaataatggatag 1240823  T
Q  334 ta 335  Q
    ||    
T  1240824 ta 1240825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 241 - 335
Target Start/End: Complemental strand, 1172213 - 1172119
Alignment:
Q  241 aaatgctataaaatagttgatctaaagaaggaaagattaaacctttaagctaaacttagttacccagtttttgactaagtgaataatggatagta 335  Q
    ||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1172213 aaatgctttaaaatagttgatttcaagaaggaaagattaaacctttaagctaaacttagttacccattttttgactaagtgaataatggatagta 1172119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 49 - 203
Target Start/End: Original strand, 32675818 - 32675971
Alignment:
Q  49 tgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncat 148  Q
    ||||||||||||||||| ||| ||||||  ||||| ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||        |||    
T  32675818 tgagcttatgaaaaataacttatgcaaataaataagtttttatattaattcataagttctcactaatgaaaattgtatcttcataagtt-attttttcat 32675916  T
Q  149 aaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||  |||||   |||||||||||||||| ||||||||||||||||||| |||||    
T  32675917 aaacaaccttacgaagcttatgaataataaataaaagcttatttatttgcataag 32675971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 10755194 - 10755362
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| ||||||||||||||| |||||||||| || ||||||  |||||  |||||| ||||| ||||| |||| ||||| |||||||||   |||    
T  10755194 tttggattgacttatttttgagcttctgaaaaatagtttatgcaaataaataagcttttatgttaattcataagttcttactaacgaaaattgt---ttc 10755290  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| |        ||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  10755291 ataagct-attttttcataagttaccttgacaagcttatgaataatacgtaaaagcttatttatttgcataag 10755362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 1172535 - 1172410
Alignment:
Q  21 aaaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgc------aaagtaataaatttttattttaatacataaat--tctcact 112  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||      |||  || |||||||||| ||||| |||||||  |||||||    
T  1172535 aaaggacccatttggattagcttatttttgagcttatgaaaaatagcttttgcaaaaaaaaaaaaaaaaatttttatgttaattcataaattctctcact 1172436  T
Q  113 aatgaaaattgtatcttcataagttg 138  Q
    |||||||||||||| |||| ||||||    
T  1172435 aatgaaaattgtattttcacaagttg 1172410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 51 - 203
Target Start/End: Complemental strand, 6776963 - 6776812
Alignment:
Q  51 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataa 150  Q
    ||||||||||||||||||| ||||||  ||||| ||||||| ||||   || | ||||||||||||||| |||||||||||||||||        |||||    
T  6776963 agcttatgaaaaatagcttatgcaaataaataagtttttatattaaagtatcagttctcactaatgaaatttgtatcttcataagtt-atttttccataa 6776865  T
Q  151 attaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    | |||||| ||||||||||| ||| || ||||||||||||||||||| |||||    
T  6776864 actaccttaacaagcttatggatattaaataaaagcttatttatttgcataag 6776812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 203
Target Start/End: Complemental strand, 23239405 - 23239251
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 147  Q
    |||||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| |||||||||| |||| ||||||| |||||| |||        |    
T  23239405 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcactaaggaaagttgtatcgtcataatttgctttttg-a 23239307  T
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||  || || |||||||||||||||||| ||||||||||||||||||| |||||    
T  23239306 taaaccacgttaacaagcttatgaataataaataaaagcttatttatttgtataag 23239251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 6752970 - 6752885
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcata 133  Q
    |||||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  6752970 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataaatcctcactaatgaaaattgtatcttcata 6752885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 2027084 - 2027258
Alignment:
Q  27 cccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtat 126  Q
    |||| |||| ||| ||||||||| ||||||||||||||||||| ||||||   ||||| |||||| ||||| ||||| |||| |||||  ||| ||||||    
T  2027084 cccagttggattgacttattttt-agcttatgaaaaatagcttatgcaaatagataaacttttatgttaattcataagttcttactaacaaaagttgtat 2027182  T
Q  127 cttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||| ||       |||||| |  |||||||| ||| |||||||| |||||||||||||||||||| |||||    
T  2027183 cttcataagctg-ttttttcataaactgtcttgacaaacttctgaataatgcataaaagcttatttatttgcataag 2027258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 6758788 - 6758631
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataa-atttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnn 144  Q
    |||| ||||| ||||||||||||| ||||||  |||||  ||||||| ||||| ||||| |||||||||| |||| ||||||||| |||||||           
T  6758788 ttttaagcttctgaaaaatagcttatgcaaataaataagctttttatattaattcataagttctcactaacgaaatttgtatcttgataagtt-aatttt 6758690  T
Q  145 ncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
     |||||| |||||| ||||||||||| |||||| | ||||||||||||||||| |||||    
T  6758689 tcataaactaccttaacaagcttatggataataaacaaaagcttatttatttgcataag 6758631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 32165187 - 32165275
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  ||||||||| |||||||||||||||||||    
T  32165187 ttttgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctctcactaacgaaaattgtatcttcataa 32165275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 2040109 - 2040261
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn-- 145  Q
    ||||||| |||||||||| ||| ||||||  ||||| ||||||| |||||  |||| |||| |||||||||||||||| ||| |||| |||             
T  2040109 ttgagctcatgaaaaataacttatgcaaataaataagtttttatattaatttataagttctaactaatgaaaattgtaactttataaattgttttttttc 2040208  T
Q  146 --cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
      ||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  2040209 ttcataaattaccttaacaaacttatgaataataaataaaagcttatttattt 2040261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 8014963 - 8014792
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| || |||||| ||| ||||||||||||||||| | |||||| ||||||  |||||| |||||  || | || |||||||  ||||||||||||||    
T  8014963 tttggatttgcttatatttaagcttatgaaaaatagcatatgcaaattaataagcttttatgttaatttatcagttttcactaaccaaaattgtatcttc 8014864  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||| |  |       |||||| ||||||||||||||||||||||||  ||||||||||| ||||||| |||||    
T  8014863 atatgcagtttttt-cataaactaccttgacaagcttatgaataatgaataaaagcttacttatttgcataag 8014792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 9202310 - 9202412
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||  ||  |||||  |||||| ||||| ||||| || |||||||| ||||||||||||||    
T  9202310 tttggattggcttattttttagcttatgaaaaatagcttatgttaataaataagcttttatgttaattcataagttatcactaataaaaattgtatcttc 9202409  T
Q  131 ata 133  Q
    |||    
T  9202410 ata 9202412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 203
Target Start/End: Original strand, 21891270 - 21891420
Alignment:
Q  52 gcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaa 151  Q
    |||||||||||||||||| ||| ||  |||||  |||||| ||||| ||||| ||||  | || ||||||| |||||||||||||||       ||||||    
T  21891270 gcttatgaaaaatagcttatgcgaatgaataagcttttatgttaattcataagttcttgcgaacgaaaattctatcttcataagttgttattt-cataaa 21891368  T
Q  152 ttaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
     ||| ||||||||||||||||||||| || ||| |||||||||||| |||||    
T  21891369 ctacattgacaagcttatgaataatatatcaaaacttatttatttgcataag 21891420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 203
Target Start/End: Original strand, 2034154 - 2034311
Alignment:
Q  45 tttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnn 144  Q
    |||| |||||||||| ||||||||| ||||||  |||||  |||||| || |  ||||| || | ||| | ||||||||||||||  |||||||          
T  2034154 ttttcgagcttatgataaatagcttatgcaaataaataagcttttatgttgaatcataagttattacttacgaaaattgtatcttggtaagttgtttttt 2034253  T
Q  145 ncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
     |||||| ||||||||||| ||||| ||||||||||||||||||||||||||| |||||    
T  2034254 -cataaactaccttgacaaacttataaataatacataaaagcttatttatttgcataag 2034311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 2255895 - 2255738
Alignment:
Q  46 ttttgagcttatgaaaaa-tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnn 144  Q
    |||||||||||| ||||| || ||| || |||  |||||  |||||| ||||| ||||  |||||||||   ||||||||||||||||||| ||          
T  2255895 ttttgagcttataaaaaaataacttatgtaaataaataagcttttatgttaattcatatgttctcactaccaaaaattgtatcttcataagctgtttttt 2255796  T
Q  145 ncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
     ||||||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||    
T  2255795 -cataaattaccttaacaagcttatgaatcatacataaaagctcatttatttgcataag 2255738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 203
Target Start/End: Original strand, 25430710 - 25430845
Alignment:
Q  64 tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaa 163  Q
    |||||| ||||||| |||||| |||||  ||||| ||||| |||||||| |  ||||||||||||||||||| ||       |||||| |||||||||||    
T  25430710 tagcttatgcaaagaaataaacttttaccttaattcataatttctcactgac-aaaattgtatcttcataagctgtttttttcataaactaccttgacaa 25430808  T
Q  164 gcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||   |||||||||| ||||||||||||| |||||    
T  25430809 gcttatg---aatacataaatgcttatttatttgtataag 25430845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 35071339 - 35071443
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| ||||||| ||  || |||| ||||||    
T  35071339 tttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctcacaaaaaaacattgcatcttc 35071438  T
Q  131 ataag 135  Q
    |||||    
T  35071439 ataag 35071443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 7267957 - 7267779
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaat-------gaaaattg 123  Q
    ||||| ||||||||||||| |||||||||| || | ||| ||||||  |||||  |||||| ||||| | ||| ||||||||  |       ||||||||    
T  7267957 tttggattggcttatttttaagcttatgaataacaacttatgcaaataaataagcttttatgttaattcgtaagttctcacttctcaccagcgaaaattg 7267858  T
Q  124 tatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    || ||||||||||||       |||||| ||||||| |||||||||||||||||||||||||||||||| |||| |||||    
T  7267857 taccttcataagttgtttttt-cataaactaccttggcaagcttatgaataatacataaaagcttatttgtttgcataag 7267779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 21871195 - 21871365
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| ||||||||| |||||||||||||||| || | ||||  ||||| ||||||| || || ||||||| |||||||| |||||||  ||| ||    
T  21871195 tttggattgacttattttttagcttatgaaaaatagtttatacaaataaataagtttttatgttgattcataaatgctcactaacgaaaattaaatcatc 21871294  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| |        |||||| |||||||||||| |||| ||||||||||||||| ||| ||||||| |||||    
T  21871295 ataagct-actttctcataaactaccttgacaag-ttatcaataatacataaaagtttacttatttgcataag 21871365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 21025252 - 21025309
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  21025252 cataaactaccttaacaagcttatgcataatacataaaagcttatttatttgcataag 21025309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 9201638 - 9201734
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcata 133  Q
    ||||||||||||| |||||||| ||||| |||| ||||||  |||||  |||||| ||||| ||||| |||||||||| | ||||||||| ||||||    
T  9201638 ttggcttattttttagcttatggaaaatcgcttatgcaaataaataagcttttatgttaattcataagttctcactaacggaaattgtattttcata 9201734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 24625912 - 24625861
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||| |||||| ||||||||||||||||||||||||||| ||||||||||    
T  24625912 cataaactaccttaacaagcttatgaataatacataaaagcgtatttatttg 24625861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 60 - 134
Target Start/End: Complemental strand, 22708432 - 22708358
Alignment:
Q  60 aaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||| ||||||  ||||| |||||||||||||  ||||| || |||||| |||||||||||||||||||    
T  22708432 aaaatagcttatgcaaataaataagtttttattttaatttataaactcccactaacgaaaattgtatcttcataa 22708358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 3211026 - 3211083
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||| ||||||||||||| | ||||||||||||||||||||||||| |||||    
T  3211026 cataaactacattgacaagcttatcagtaatacataaaagcttatttatttgcataag 3211083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 10054442 - 10054385
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||| || |||| ||||||||||||||||||||||||||||||||| |||||    
T  10054442 cataaactacatttacaaacttatgaataatacataaaagcttatttatttgcataag 10054385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 203
Target Start/End: Complemental strand, 10687478 - 10687311
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 136  Q
    ||||||||||||| |||||||||||| ||| || ||||||  |||||  |||||| | | | ||||| ||||| |||| ||||||||||||| |||||||    
T  10687478 ttggcttattttttagcttatgaaaa-tagtttatgcaaataaataagcttttatgtcagttcataagttctcgctaacgaaaattgtatctccataagt 10687380  T
Q  137 tgnnnnnnncataaattaccttgacaagcttatgaat---aatacataaaagcttatttatttgaataag 203  Q
    ||       |||||| |||||| | | ||||||||||   ||||||| |||||||||||||||| |||||    
T  10687379 tg-tttttacataaactaccttaataggcttatgaataaaaatacatcaaagcttatttatttgcataag 10687311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 12817117 - 12817174
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||| ||||| |||||||||||||||||| |||||||||||||||| |||||    
T  12817117 cataaactacattgactagcttatgaataatacattaaagcttatttatttgcataag 12817174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 30534041 - 30533984
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||| || |||| ||||||||||||||||||||||||||||||||| |||||    
T  30534041 cataaactacatttacaaacttatgaataatacataaaagcttatttatttgcataag 30533984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 1189543 - 1189455
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||| ||||||||||||||||| || |||  |||||  ||| ||||||||  ||||| ||||||||| ||||| |||||||||||||    
T  1189543 ttttgaacttatgaaaaatagcttatgtaaataaataagctttaattttaatttataaactctcactaacgaaaagtgtatcttcataa 1189455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 29052492 - 29052337
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    |||||||||||||||||||||||| || |||  ||||| |||| ||||||||  ||||  |||||| || || ||||||||| ||||||  ||           
T  29052492 ttttgagcttatgaaaaatagcttatgtaaataaataagtttt-attttaatttataagctctcacaaacgagaattgtatcatcataaactgtttttt- 29052395  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| |||||| |||| ||||| ||||||||||||||| |||||| |||| |||||    
T  29052394 cataaaataccttaacaaacttataaataatacataaaagtttatttttttgtataag 29052337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 203
Target Start/End: Original strand, 29623404 - 29623559
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    ||||||| |||||||||||||||| ||||||  |||||  ||| || ||||| ||||| |||||||||| ||||| | ||| |||||||||||           
T  29623404 ttttgagtttatgaaaaatagcttatgcaaataaataagattt-atgttaattcataagttctcactaacgaaaactttattttcataagttg-tttttt 29623501  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||| || |||| || || ||||||| ||||||| ||||||||||| |||||    
T  29623502 cataaactacattaacaaactcataaataataaataaaaggttatttatttgcataag 29623559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 34223452 - 34223539
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaa-tgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  |||||||||   ||||||||||||||||||    
T  34223452 ttgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctctcactaacaaaaaattgtatcttcataa 34223539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 12816822 - 12816908
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaataca-taaattctcactaatgaaaattgtat 126  Q
    |||||||||||||||||||||||||| || ||||||  |||||  |||||| ||||| || ||| |||||||||| |||||| ||||    
T  12816822 cttatttttgagcttatgaaaaatagtttatgcaaataaataagcttttatgttaattcattaagttctcactaacgaaaatggtat 12816908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 32615341 - 32615429
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||| ||| || |||  | |||  ||||||||||||  |||   ||||||||| |||||||||||||||||||    
T  32615341 ttttgagcttatgaaaaataacttatgtaaataagtaagcttttattttaatttatatgctctcactaacgaaaattgtatcttcataa 32615429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 182
Target Start/End: Complemental strand, 6958804 - 6958649
Alignment:
Q  25 gacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgt 124  Q
    ||||| ||||| ||| ||||||||| || ||||||||| |||||| |||| |  |||||  ||||||  ||||  |||| |||||||||| |||||||||    
T  6958804 gacccgtttggattgtcttattttttagtttatgaaaa-tagcttatgcacataaataagcttttatactaatttataacttctcactaaagaaaattgt 6958706  T
Q  125 atcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataa 182  Q
    ||||||| ||| ||       || ||| |||||||| |||||||||||| ||||||||    
T  6958705 atcttcacaagctg-ctttttcacaaactaccttgagaagcttatgaatgatacataa 6958649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 9894827 - 9894776
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||| |||||| |||| ||||| ||||||||||||||| |||||||||||    
T  9894827 cataaaataccttaacaaacttataaataatacataaaagattatttatttg 9894776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 9894930 - 9894847
Alignment:
Q  51 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  ||||| ||| ||||||||||  |||||||    
T  9894930 agcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctctcaataacgaaaattgtaaattcataa 9894847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 17300681 - 17300768
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||| ||||||||||||||| || || |||  ||||| |||||||||||||  |||| || ||||||| |||| |||||| |||||||    
T  17300681 tttgggcttatgaaaaatagtttatgtaaataaataactttttattttaatttataagttgtcactaacgaaagttgtatattcataa 17300768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 20776528 - 20776469
Alignment:
Q  32 ttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttat 91  Q
    |||| ||||||||||||||||| ||||||||||| ||| ||||||  |||||| ||||||    
T  20776528 ttggattggcttatttttgagcatatgaaaaataacttatgcaaataaataaacttttat 20776469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 10184258 - 10184344
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||| |  |||  |||||  ||||||||||||  ||||  ||| ||||| ||||||||| |||||||||    
T  10184258 ttgagcttatgaaaaatagcttatataaataaataagcttttattttaatttataagctcttactaacgaaaattgtttcttcataa 10184344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 6632720 - 6632663
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||| || ||||| |||| |||||||||||||||| |||||||||| |||||    
T  6632720 cataaactacattaacaagtttataaataatacataaaagcatatttatttgcataag 6632663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 203
Target Start/End: Original strand, 9201768 - 9201813
Alignment:
Q  158 tgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||||||||||||||||  |||||||||| ||||| |||||    
T  9201768 tgacaagcttatgaataatacagcaaagcttattcatttgcataag 9201813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 1468333 - 1468246
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||| |||||| || |||  ||||| |||||||||||||  ||||  ||| ||||| |||||| || |||||||||    
T  1468333 ttttgagcttatgaaaa-tagcttatgtaaataaataagtttttattttaatttataagctcttactaacgaaaatggtttcttcataa 1468246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 4808731 - 4808643
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || | |  | ||| |||||||||||||  ||||   || ||||| ||| |||||||||||||||    
T  4808731 ttttgagcttatgaaaaatagcttatgtatataagtaagtttttattttaatttataagcccttactaacgaatattgtatcttcataa 4808643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 65
Target Start/End: Original strand, 7446780 - 7446808
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaata 65  Q
    |||||||||||||||||||||||||||||    
T  7446780 ttggcttatttttgagcttatgaaaaata 7446808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 5e-41; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 22 - 197
Target Start/End: Complemental strand, 4068299 - 4068125
Alignment:
Q  22 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaat 121  Q
    |||| ||| ||||| ||||||||||||| || ||||||||| |||||| ||||||  |||||| |||||| ||||| ||||| |||||||||| ||||||    
T  4068299 aagggcccgtttggattggcttattttttagtttatgaaaagtagcttatgcaaataaataaacttttatattaattcataagttctcactaacgaaaat 4068200  T
Q  122 tgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
     ||||||||||||||||       |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4068199 agtatcttcataagttg-ttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttg 4068125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 48819474 - 48819303
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| ||||||||||  |||| |||||||||    
T  48819474 tttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctcactaacaaaaaatgtatcttc 48819375  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| ||       |||||| |||||||||||||||||||||||||||| |||||| ||||||||| |||||    
T  48819374 ataagctg-ttttttcataaactaccttgacaagcttatgaataatacattaaagctcatttatttgcataag 48819303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 31 - 202
Target Start/End: Complemental strand, 37712242 - 37712073
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| |||||||||||||||| |||||||||||| ||||||  |||||| |||||| ||||| ||||| |||| ||||| |||| ||||||||||    
T  37712242 tttggattgacttatttttgagcttacgaaaaatagcttatgcaaataaataaacttttatgttaattcataagttcttactaacgaaagttgtatcttc 37712143  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    ||||||||       |||||| ||||||||||||||||||||| ||||||||||||||||| ||||| ||||    
T  37712142 ataagttg-ttttttcataaactaccttgacaagcttatgaat-atacataaaagcttattcatttgcataa 37712073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 15515258 - 15515421
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||||||||||| |||||||||||||||||||||  | |||  |||||  ||| || ||||| ||||| |||||||||| |||||||||||||||    
T  15515258 tttggattggcttatttatgagcttatgaaaaatagcttaagtaaataaataagctttcatgttaattcataagttctcactaacgaaaattgtatcttc 15515357  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatt 195  Q
    ||||| |        |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15515358 ataagct-cttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatt 15515421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 197
Target Start/End: Original strand, 16888891 - 16889041
Alignment:
Q  42 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnn 141  Q
    |||||||||||||||||||||||   || ||||||  |||||  |||||| ||||  ||||||||||||||||||||||||||||||||||||| ||       
T  16888891 ttatttttgagcttatgaaaaat---ttatgcaaataaataagcttttatgttaagtcataaattctcactaatgaaaattgtatcttcataagctg-tt 16888986  T
Q  142 nnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
        |||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  16888987 ttttcataaactacctt-acaagcttatgaataatacataaaagcttatttatttg 16889041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 37329333 - 37329493
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 140  Q
    ||||||||||||||||||||||||| ||| ||||||  |||||  |||||| |||||  |||| ||||||| || |||||||||||||||||||| ||      
T  37329333 cttatttttgagcttatgaaaaataacttatgcaaataaataagcttttatgttaatttataagttctcaccaacgaaaattgtatcttcataagctg-t 37329431  T
Q  141 nnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
         |||||| |||||||||||| |||||||||||||||||||||| ||||||||| ||||    
T  37329432 tttttcataaactaccttgacaagtttatgaataatacataaaagctcatttatttgcataa 37329493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 45267637 - 45267469
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||    |||  |||||| || || ||||| |||| ||||| |||||||||||||||    
T  45267637 tttgggttggattatttttgagcttatgaaaaatagcttatgcaaa----taagcttttatgtttattcataagttcttactaacgaaaattgtatcttc 45267542  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| ||       |||||| |||||||||||||| || ||||||||  ||||||||||||||||| |||||    
T  45267541 ataagctgtttttttcataaactaccttgacaagctaataaataatactaaaaagcttatttatttgcataag 45267469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 46 - 197
Target Start/End: Complemental strand, 13039107 - 13038957
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    |||||| ||||||||||||||||| ||||||  |||||| |||||| ||||| ||||| |||||||||| ||||| | |||||||||||||||           
T  13039107 ttttgaacttatgaaaaatagcttatgcaaataaataaacttttatattaattcataacttctcactaacgaaaactttatcttcataagttg-tttttt 13039009  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||| |||||| ||||||| |||||||||| |||||||||||||||||||    
T  13039008 cataaactaccttaacaagctcatgaataatatataaaagcttatttatttg 13038957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 31 - 190
Target Start/End: Complemental strand, 28690179 - 28690021
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| ||| ||||||||||||||||||||||||| ||||||  |||||  |||||| ||||| || || ||||||||||| ||||||||||||||    
T  28690179 tttggattgacttgtttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcagaatttctcactaataaaaattgtatcttc 28690080  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttat 190  Q
    ||||| ||       |||||| ||||||||||| |||||||||||||||||||| |||||    
T  28690079 ataagctg-tttgttcataaactaccttgacaaacttatgaataatacataaaaccttat 28690021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 31 - 197
Target Start/End: Complemental strand, 26988323 - 26988158
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| |||||||||||||||||||||||||| || ||||||  ||| |  |||||| ||||| ||||| || | ||||| || ||||||||||||    
T  26988323 tttggattgacttatttttgagcttatgaaaaatagtttatgcaaataaattagcttttatgttaattcataagtttttactaacgacaattgtatcttc 26988224  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    ||||| ||       |||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  26988223 ataagctgtttttt-cataaactaccttgacaagcttatgaataagacataaaagcttatttatttg 26988158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 192
Target Start/End: Original strand, 41196612 - 41196781
Alignment:
Q  22 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaat 121  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||| ||||||  |||||   ||||| ||||| || ||  |||||||||  |||||    
T  41196612 aagggcccatttggattggcttatttttgagcttatgtaaaatagcttatgcaaataaataagcctttatgttaattcacaagctctcactaacaaaaat 41196711  T
Q  122 tgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttattt 192  Q
    |||||||||||||| ||       |||||| ||| |||||||||||||||||||||||||||| |||||||    
T  41196712 tgtatcttcataagctg-ttttttcataaactacattgacaagcttatgaataatacataaaaacttattt 41196781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 196
Target Start/End: Original strand, 6337697 - 6337831
Alignment:
Q  61 aaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttga 160  Q
    ||||||||| ||||||  |||||  |||||| ||||| ||||| ||||| ||||  ||||||||||||||||||| ||       |||||| ||||||||    
T  6337697 aaatagcttatgcaaacaaataagcttttatgttaattcataagttctcgctaacaaaaattgtatcttcataagctgtttttt-cataaactaccttga 6337795  T
Q  161 caagcttatgaataatacataaaagcttatttattt 196  Q
    ||||||||||||||||||||||||||||||||||||    
T  6337796 caagcttatgaataatacataaaagcttatttattt 6337831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 35897530 - 35897705
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| ||||||||||| ||||||||||||||||| || |||  |||||| |||||| |||||  ||||||| |||||||||||||||||||| |     
T  35897530 tttggattgacttatttttgaacttatgaaaaatagcttatgtaaataaataaacttttatgttaatttataaattttcactaatgaaaattgtatcgtt 35897629  T
Q  131 ataag---ttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||   ||        |||||| ||| |||| |||||||||||||||| |||||| |||||||||||| |||||    
T  35897630 ataagtttttttttccttcataaactactttgaaaagcttatgaataataaataaaaacttatttatttgcataag 35897705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 86 - 203
Target Start/End: Original strand, 3069820 - 3069936
Alignment:
Q  86 ttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaag 185  Q
    |||||| ||||| ||||| ||||||||| ||||||||||||||||||||| ||       |||||| |||||||||||||||||||||||||||| ||||    
T  3069820 ttttatgttaattcataagttctcactagtgaaaattgtatcttcataagctgtttttt-cataaactaccttgacaagcttatgaataatacattaaag 3069918  T
Q  186 cttatttatttgaataag 203  Q
    |||| ||||||| |||||    
T  3069919 cttacttatttgtataag 3069936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 48 - 202
Target Start/End: Original strand, 46689478 - 46689631
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 147  Q
    |||||||||||||||||| ||| ||||||  |||||| | |||| ||||| ||||| |||||||||| ||||||| ||| |||||||||||        |    
T  46689478 ttgagcttatgaaaaataacttatgcaaataaataaactattatattaattcataagttctcactaacgaaaattttattttcataagttgttttatt-a 46689576  T
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||| |||||| ||||||| |||||||||| |||||||||| |||||||| ||||    
T  46689577 taaaataccttaacaagctcatgaataataaataaaagcttttttatttgcataa 46689631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 31249834 - 31249754
Alignment:
Q  54 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||| ||||||||||  |||||| |||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  31249834 ttatgaaaaataacttttgcaaataaataaacttttatattaattcatagattctcactaatgaaaattgtatcttcataa 31249754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 196
Target Start/End: Complemental strand, 41130169 - 41130005
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| |||||||||||| |||||||||||||||| ||| | | ||  |||||  |||||| ||||| | ||| ||  ||||||||||||||||||||||    
T  41130169 tttggattggcttattttcgagcttatgaaaaataacttattctaataaataagattttatgttaattcttaagtttgcactaatgaaaattgtatcttc 41130070  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    ||||||||       ||||||  |||| || ||||||||||||||||||||||| ||| |||||||    
T  41130069 ataagttg-ttttgacataaaccacctagagaagcttatgaataatacataaaaacttttttattt 41130005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 196
Target Start/End: Original strand, 1565286 - 1565457
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaa-------ttctcactaatgaaaattg 123  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||  |||||  |||||| ||| | ||||||       | |||||||  ||||||||    
T  1565286 tttggattggcttatttttgagcttatgaaaaatagc-tttgcaaataaataagcttttatgttatttcataaatcataagtactcactagcgaaaattg 1565384  T
Q  124 tatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||||||||| |||        |||||| |||||||||||||||| ||||||| ||||||||||| |||||||    
T  1565385 tatcttcatatgttatttttttcataaactaccttgacaagcttacgaataatgcataaaagcttgtttattt 1565457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 41 - 203
Target Start/End: Complemental strand, 35590296 - 35590134
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttatt-ttaatacataaattctcactaatgaaaattgtatcttcataagttgn 139  Q
    ||||||||| ||||||  ||||||||||| | ||||  || || |||||| | ||||| ||||| |||||||| | |||||||||||||||||||| ||     
T  35590296 cttatttttaagcttagaaaaaatagcttatccaaataaaaaagtttttaatgttaattcataagttctcactgacgaaaattgtatcttcataagctgt 35590197  T
Q  140 nnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
          ||||||  |||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  35590196 ttttt-cataaacaaccttgacaagcttatgaactatacataaaagcttatttatttgcataag 35590134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 203
Target Start/End: Original strand, 36422909 - 36423063
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 147  Q
    |||| |||||||| |||| ||| ||||||  |||||| |||||| ||| |  |||| |||||||||| |||| || |||||||||||||||       ||    
T  36422909 ttgatcttatgaagaataacttatgcaaataaataaacttttatattattttataacttctcactaacgaaatttttatcttcataagttgtttatt-ca 36423007  T
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||| |||||| |||| ||||||||||||| ||||||||||||||||||| |||||    
T  36423008 taaactaccttaacaaacttatgaataataaataaaagcttatttatttgcataag 36423063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 48 - 197
Target Start/End: Original strand, 9572712 - 9572861
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 147  Q
    |||||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| ||||||||||  |||| | ||||||||||| |||       ||    
T  9572712 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcactaacaaaaactttatcttcataaattg-ttttttca 9572810  T
Q  148 taaattaccttgacaagcttatgaataatacat-aaaagcttatttatttg 197  Q
    |||| |||||| |||| ||||||||||||| || |||||||||||||||||    
T  9572811 taaactaccttaacaaacttatgaataataaataaaaagcttatttatttg 9572861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 10082426 - 10082254
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    |||||||||  ||||||||||||||||||| ||||  ||   ||||  |||||  |||||| ||||| ||||| ||||||| ||  |||| ||||| |||    
T  10082426 tttgggttgagttatttttgagcttatgaacaatacattacacaaataaataagcttttatattaattcataagttctcacgaaccaaaaatgtattttc 10082327  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||       |||||| ||||||||||| ||||| ||||| |||||||| |||||||||||| |||||    
T  10082326 ataagttgtttttttcataaactaccttgacaaacttatcaataacacataaaaacttatttatttgcataag 10082254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 47 - 203
Target Start/End: Original strand, 32497199 - 32497353
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnc 146  Q
    ||||||||||||||||||||||| || |||  |||||| ||||||||||||  ||||  ||||||||| |||||||||||| ||||||  ||       |    
T  32497199 tttgagcttatgaaaaatagcttatgtaaataaataaacttttattttaatttataagctctcactaacgaaaattgtatcctcataaactg-ttttttc 32497297  T
Q  147 ataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| |||||| | || ||||| |||||||||||||| |||||||||||| |||||    
T  32497298 ataaactacctt-aaaaacttataaataatacataaaaacttatttatttgcataag 32497353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 196
Target Start/End: Original strand, 26946015 - 26946180
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| ||||||||||||||||||||||  ||||| || |||  || ||  |||| |  |||| || || || ||||||| |||||||||||||||    
T  26946015 tttggattgacttatttttgagcttatgaaaatcagcttatgtaaataaacaagcttttgtactaattcacaagttgtcactaaggaaaattgtatcttc 26946114  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacat-aaaagcttatttattt 196  Q
    ||||||||       |||||| |||||| |||||||||||||||| |||| ||||||||||||||||    
T  26946115 ataagttgtttttt-cataaactaccttaacaagcttatgaataacacataaaaagcttatttattt 26946180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 28870378 - 28870274
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| |||||||| |||| ||||||||||||||| ||||||||||  |||||  |||||| || || ||||| |||||||||| |||||||| || |||    
T  28870378 tttggattggcttaatttttagcttatgaaaaataacttttgcaaataaataagcttttatgttcattcataagttctcactaaagaaaattgcattttc 28870279  T
Q  131 ataag 135  Q
    |||||    
T  28870278 ataag 28870274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 1005508 - 1005344
Alignment:
Q  38 tggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagtt 137  Q
    |||| |||||||  ||||||||||||||||||   ||||  ||| |  ||| || ||||| ||||| |||||||||   ||||||||||||||||||||     
T  1005508 tggcatatttttctgcttatgaaaaatagcttactcaaataaatgagctttgatgttaattcataagttctcactatcaaaaattgtatcttcataagta 1005409  T
Q  138 gnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |       ||| || ||||| |||||||||||||||||||| |||||||||||||||||| |||||    
T  1005408 gtttttt-cattaactacctagacaagcttatgaataatacgtaaaagcttatttatttgcataag 1005344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 10365335 - 10365176
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 140  Q
    ||||||||| ||||||||||||||||||| ||||||  |||||  |||||| |||||  | || || | ||||| ||||||||||| |||||  ||||      
T  10365335 cttatttttaagcttatgaaaaatagcttatgcaaatgaataagcttttatgttaatttaaaagtttttactaacgaaaattgtatattcatcggttgtt 10365236  T
Q  141 nnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
         |||||| ||| ||||||||||||| ||||||||||||||| ||||| ||||| ||||    
T  10365235 ttt--cataaactactttgacaagcttattaataatacataaaagtttattcatttgcataa 10365176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 26435082 - 26435189
Alignment:
Q  27 cccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtat 126  Q
    ||||||||| ||| ||||||||| |||||||||||||||| || ||||||  |||| | || ||| ||||| ||||| |||||| ||| ||||| |||||    
T  26435082 cccatttggattgacttatttttaagcttatgaaaaatagtttatgcaaataaatagacttatatgttaattcataagttctcagtaacgaaaaatgtat 26435181  T
Q  127 cttcataa 134  Q
    ||||||||    
T  26435182 cttcataa 26435189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 47413547 - 47413385
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||  |||||  |||||| |||||  |||| || |||| ||   ||||| |||||||    
T  47413547 tttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgttaatttataatttttcaccaacacaaattatatcttc 47413448  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatt 195  Q
    ||||  ||       |||||| ||| ||||||||||||| ||||||||| ||||||| |||||||    
T  47413447 ataacctg-ttatttcataaactacattgacaagcttataaataataca-aaaagctcatttatt 47413385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 18327585 - 18327528
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| || |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  18327585 cataaactatcttgacaagcttatgagtaatacataaaagcttatttatttgcataag 18327528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 8061943 - 8062023
Alignment:
Q  54 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||| || || |||  |||||||||||||||||||  ||||  |||||| ||||||||||||||||||||||    
T  8061943 ttatgaaaaataggttatgtaaataaataaatttttattttaatttataagctctcacaaatgaaaattgtatcttcataa 8062023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 8410293 - 8410205
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || |||  |||||  ||||||||||||  | ||  ||||||||| |||||||||||||||||||    
T  8410293 ttttgagcttatgaaaaatagcttctgtaaataaataagcttttattttaatttacaagctctcactaacgaaaattgtatcttcataa 8410205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 17814350 - 17814262
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || |||  |||||  ||||||||||||  |||| |||| ||||| ||||||||||| |||||||    
T  17814350 ttttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttctgactaacgaaaattgtattttcataa 17814262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 10850096 - 10850147
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||||||||||    
T  10850096 cataaactacgttgacaaccttatgaataatacataaaagcttatttatttg 10850147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 17628352 - 17628439
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||||||| || |||  |||||  ||||||||||||  | ||  ||||||||| |||||||||||||||||||    
T  17628352 tttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttagaagctctcactaacgaaaattgtatcttcataa 17628439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 391345 - 391251
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaa-tttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    |||||||| |||| ||||||||||||||||||| | ||||  |||||  ||||||| ||||| ||||| ||||| |||| |||||||||||||||    
T  391345 ttggcttaatttttagcttatgaaaaatagcttatccaaataaataagctttttatgttaattcataagttctcgctaacgaaaattgtatcttc 391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 42591540 - 42591454
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  | ||||||| ||||| |||||||||||||    
T  42591540 ttgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctttcactaacgaaaagtgtatcttcataa 42591454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 15791542 - 15791457
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 132  Q
    ||||||||||||||||||||||| || |||  |||||  ||||||||||||  ||||  ||||| ||| |||||||||||||||||    
T  15791542 tttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttataagctctcattaacgaaaattgtatcttcat 15791457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 31378776 - 31378833
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||||||||||||||| | ||||||| ||||||||||||||||||| |||||    
T  31378776 cataaactaccttgacaagcttgttaataatatataaaagcttatttatttgcataag 31378833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 14460967 - 14461055
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||| |||| ||||||| ||  |||||  || |||||||||| |||||  |||| ||||||||||||||||||||||||| ||||    
T  14460967 ttttgagcctatgcaaaatagtttacgcaaataaacaaatttttatgttaatttataagttctcactaatgaaaattgtatctttataa 14461055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 15235087 - 15235175
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  ||| ||||| |||||| || |||||||||    
T  15235087 ttttgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctcttactaacgaaaatggtttcttcataa 15235175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 16708958 - 16708871
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||| |  || ||||||  ||||||||||||| ||||| |||||  ||| ||||||||||||||||| |||||||    
T  16708958 ttttgagcttatgaaaaagat-ttatgcaaataaataaatttttatgttaattcataagatcttactaatgaaaattgtatattcataa 16708871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 25485908 - 25485820
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||| ||||||| ||| ||||| ||||||  ||||||||||||| |||||  ||||||| ||||||  ||||||| |||||||||||    
T  25485908 ttttgaacttatgagaaagagcttatgcaaataaataaatttttatattaatttataaattttcactagcgaaaattttatcttcataa 25485820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 203
Target Start/End: Original strand, 35282539 - 35282676
Alignment:
Q  65 agcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaag 164  Q
    ||||| ||||||  |||| | |||||| ||||| ||||| || |||||||| |||||| |||||||||||||||       |||||| |||||| ||| |    
T  35282539 agcttatgcaaataaatagacttttatattaattcataagttttcactaattaaaattttatcttcataagttg-ttttttcataaactaccttaacatg 35282637  T
Q  165 cttatgaataatacataaaagcttatttatttgaataag 203  Q
     |||| ||||||| ||||| ||||||||||||| |||||    
T  35282638 tttataaataataaataaacgcttatttatttgcataag 35282676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 131
Target Start/End: Complemental strand, 42367125 - 42367026
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| || |||||||||| ||||||||||||||||||| ||||||  ||||| || |||| ||||| ||| |||||| | |||  ||||||||||||||    
T  42367125 tttggatttgcttatttttaagcttatgaaaaatagcttatgcaaataaataagttcttatgttaattcat-aattcttattaacaaaaattgtatcttc 42367027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 5347313 - 5347226
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||||||| || |||  |||||  ||||||||||||  |||| |||| | ||| ||||||||||| |||||||    
T  5347313 tttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttctgattaacgaaaattgtattttcataa 5347226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 12256733 - 12256678
Alignment:
Q  79 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||| ||||| |||| ||||| |||||||||| ||||||||    
T  12256733 aataaatttttattttaattcataagttcttactaacgaaaattgtaccttcataa 12256678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 19285025 - 19284970
Alignment:
Q  79 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||  |||| || ||||||| |||||||||||||||||||    
T  19285025 aataaatttttattttaatctataatttttcactaacgaaaattgtatcttcataa 19284970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 19395932 - 19395846
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||| |  | |  ||||| |||||||||||||  ||||  | ||||||| |||||||||||||||||||    
T  19395932 ttgagcttatgaaaaatagcttatatatataaataagtttttattttaatttataagctttcactaacgaaaattgtatcttcataa 19395846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 26936919 - 26936863
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||||||||||||||||||| | ||||||| ||||||||||||||| |||||    
T  26936919 cataaactaccttgacaagcttatgagt-atacatagaagcttatttatttgcataag 26936863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 17349038 - 17348950
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||| ||||||||||||||||| || |||  ||||| |||||||||||||  ||||| ||||| ||  |||||| |||| |||||||    
T  17349038 ttttgaacttatgaaaaatagcttatgtaaataaataagtttttattttaatttataaactctcagtagagaaaatcgtattttcataa 17348950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 19220333 - 19220245
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||||| || ||||||  |||||  ||||||||||||  ||||  ||||| ||  |||||||| ||||||||||    
T  19220333 ttttgagcttatgaaaaatagtttatgcaaataaataagcttttattttaatttataatctctcattatcgaaaattgcatcttcataa 19220245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 39941420 - 39941380
Alignment:
Q  157 ttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||||||||||||||||||||||||| || |||||||||    
T  39941420 ttgacaagcttatgaataatacataaaaactcatttatttg 39941380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 39941491 - 39941451
Alignment:
Q  157 ttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  39941491 ttgacaagcttatgaataatacataaaagttcatttatttg 39941451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 46473254 - 46473105
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    ||||||||||| | ||||||| || ||||||  |||||  |||||| ||||| ||||| |||| | ||| ||||| | |||||||||||||||           
T  46473254 ttttgagcttacggaaaataggttatgcaaataaataagattttatattaattcataagttcttattaacgaaaactttatcttcataagttg-tttttt 46473156  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||| | |||||| | || || |||||||||| ||||||||||||||||||    
T  46473155 catatactaccttaaaaacctcatgaataataaataaaagcttatttattt 46473105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 391219 - 391172
Alignment:
Q  157 ttgacaagcttatgaataatacat-aaaagcttatttatttgaataag 203  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||    
T  391219 ttgacaagcttatgaataatatataaaaagcttatttatttgcataag 391172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 3115989 - 3116076
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||| ||| || |||  | |||  ||||||||||||  ||||  ||| ||||| |||||||||||||||||||    
T  3115989 tttgagcttatgaaaaataacttatgtaaataagtaagcttttattttaatttataagatcttactaacgaaaattgtatcttcataa 3116076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 22593446 - 22593489
Alignment:
Q  160 acaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||||||||||||||||||  ||||||||||| |||||    
T  22593446 acaagcttatgaataatacataaaaatttatttatttgcataag 22593489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 203
Target Start/End: Complemental strand, 41003514 - 41003391
Alignment:
Q  79 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattacctt-gacaagcttatgaataata 177  Q
    |||||| |||||| |||||  |||| ||||||||||| |||||| ||||||  |||| ||       |||||| |||||| ||||| ||||| |||||||    
T  41003514 aataaacttttatgttaattaataagttctcactaataaaaattatatcttagtaagctgttttt--cataaactacctttgacaaacttataaataata 41003417  T
Q  178 cataaaagcttatttatttgaataag 203  Q
    ||||||| |||||||||||| |||||    
T  41003416 cataaaaacttatttatttgcataag 41003391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 20169306 - 20169268
Alignment:
Q  165 cttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  20169306 cttataaataatacataaaagcttatttatttgcataag 20169268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 41576323 - 41576409
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||  ||||| || ||||||  |||||| |||||| |||||| |||| || |||||||  |||||| |||||||||||    
T  41576323 ttgagcttatgatgaatagattatgcaaataaataaacttttatgttaatatataagttatcactaacaaaaattatatcttcataa 41576409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 125
Target Start/End: Complemental strand, 49822863 - 49822817
Alignment:
Q  79 aataaatttttattttaatacataaattctcactaatgaaaattgta 125  Q
    ||||| ||||||||||||| |||||||| ||||||| ||||||||||    
T  49822863 aataagtttttattttaattcataaattttcactaacgaaaattgta 49822817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 1265718 - 1265775
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| |||||||||||  ||||||||||||||||||| ||||| | |||| |||||    
T  1265718 cataaactaccttgacaaaattatgaataatacataaaatcttatctgtttgtataag 1265775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 127
Target Start/End: Complemental strand, 9575492 - 9575407
Alignment:
Q  42 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc 127  Q
    |||||||| | |||||||||||||| || | ||||  |||||||| |||| |||||  |||||||||| |||| ||||||| ||||    
T  9575492 ttatttttaaacttatgaaaaatagtttatacaaataaataaattattatgttaatttataaattctctctaacgaaaattatatc 9575407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 15631965 - 15631908
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||| || |||| ||||| |||||||||||||| |||||||||||| |||||    
T  15631965 cataaaatacattaacaaacttataaataatacataaaaacttatttatttgtataag 15631908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 134
Target Start/End: Complemental strand, 22103262 - 22103181
Alignment:
Q  53 cttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||| || |||  || ||  ||||||||||||  |||| |||| ||||| ||||||||||| |||||||    
T  22103262 cttatgaaaaatagcttatgtaaataaagaagcttttattttaatctataagttctaactaacgaaaattgtattttcataa 22103181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 179
Target Start/End: Complemental strand, 23544852 - 23544819
Alignment:
Q  146 cataaattaccttgacaagcttatgaataataca 179  Q
    |||||| |||||||||||||||||||||||||||    
T  23544852 cataaactaccttgacaagcttatgaataataca 23544819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 51409732 - 51409789
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||| || |||| ||||||||||||||||| || |||||||||||| |||||    
T  51409732 cataaactacatttacaaacttatgaataatacatacaaacttatttatttgcataag 51409789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 165 - 197
Target Start/End: Complemental strand, 8410191 - 8410159
Alignment:
Q  165 cttatgaataatacataaaagcttatttatttg 197  Q
    |||||||||||||||||||| ||||||||||||    
T  8410191 cttatgaataatacataaaaacttatttatttg 8410159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 22593337 - 22593421
Alignment:
Q  50 gagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||| |||| ||||| ||||||  |||||  |||||| |||||  |||| ||||||||||  ||||||||||||| ||||    
T  22593337 gagcttatgcaaaacagcttatgcaaataaataagcttttatgttaatttataagttctcactaacaaaaattgtatctttataa 22593421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 39941560 - 39941520
Alignment:
Q  157 ttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    ||||||||||||||||||||||||||||  | |||||||||    
T  39941560 ttgacaagcttatgaataatacataaaaattcatttatttg 39941520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 3e-36; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 28 - 203
Target Start/End: Original strand, 48591332 - 48591506
Alignment:
Q  28 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc 127  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||||  |||||  |||||  ||||| ||||| |||||| ||| ||||||||||||    
T  48591332 ccatttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttacgttaattcataagttctcattaacgaaaattgtatc 48591431  T
Q  128 ttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||| ||       |||||| ||||||||||||| ||||||||||| |||||| |||||||||||| |||||    
T  48591432 ttcataagctg-ttttttcataaactaccttgacaagcgtatgaataatatataaaaacttatttatttgcataag 48591506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 31 - 184
Target Start/End: Complemental strand, 17223004 - 17222852
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||||  ||||| ||||||| ||||| ||||| |||| ||||| |||||||||||||||    
T  17223004 tttggattggcttatttttgagcttatgaaaaatagcttattcaaataaataagtttttatgttaattcataagttctaactaacgaaaattgtatcttc 17222905  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaa 184  Q
    ||||  ||       |||||| ||||||||||||||||||||||||||||||||    
T  17222904 ataatctg-ttttttcataaactaccttgacaagcttatgaataatacataaaa 17222852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 23297599 - 23297442
Alignment:
Q  42 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnn 141  Q
    |||||||||||||||||||||||||||| ||||||  |||||  ||||||  |||| ||||| ||||| ||||  ||||||||||||||||||| ||       
T  23297599 ttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttatgctaattcataagttctcgctaacaaaaattgtatcttcataagctgttt 23297500  T
Q  142 nnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
        |||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  23297499 ----cataaactaccttgacaaacttatgaataatacataaaagcttatttatttgcataag 23297442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 12495555 - 12495728
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| |||||||||||||||||||||| |||||| ||||||  ||||| ||||||| |||||  |||| |||||||||||||| ||||||||||     
T  12495555 tttggattgtcttatttttgagcttatgaaaagtagcttatgcaaataaataagtttttatgttaatttataagttctcactaatgaatattgtatcttg 12495654  T
Q  131 ataagttgnnnnnnncataaattacc--ttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    || || ||       |||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  12495655 attagctg-ttttttcataaactaccttttgacaagcttatgaataatacataaaagcttatttatttgcataag 12495728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 28074548 - 28074369
Alignment:
Q  22 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaat 121  Q
    |||| ||| ||||| ||||||||||||| || |||||||||||||||| ||||||  |||||  |||||| ||| | || || || || |||| ||||||    
T  28074548 aagggcccctttggattggcttattttttagtttatgaaaaatagcttatgcaaataaataagattttatgttatttcacaagttttcgctaacgaaaat 28074449  T
Q  122 tgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||||||| |        |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28074448 tgtatcttcataagct--ttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataag 28074369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 36741079 - 36740908
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||  |||||  |||| | || || ||||| ||||||||||||||||||||||||||    
T  36741079 tttggattggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttttgtgttgattcataagttctcactaatgaaaattgtatcttc 36740980  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    || |  ||       |||||| ||| |||||||||||||| |||||| ||||||||||||||||||| |||||    
T  36740979 atgaactg-tattttcataaactactttgacaagcttatgcataatatataaaagcttatttatttgcataag 36740908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 22 - 202
Target Start/End: Complemental strand, 29877825 - 29877644
Alignment:
Q  22 aaggacccatttgggttggctta--tttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaa 119  Q
    |||| ||||||||| ||||||||  ||||| | ||||||||||||||||| ||||||   ||||  |||||| ||||| ||||| ||||||||||  |||    
T  29877825 aagggcccatttggattggcttactttttttatcttatgaaaaatagcttatgcaaatatataagcttttatgttaattcataagttctcactaacaaaa 29877726  T
Q  120 attgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||||||||||||||| ||       |||||| ||||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  29877725 attgtatcttcataagctg-ctttttcataaactaccttagcaagcttatgaataatacataaaagcttatttatttgcataa 29877644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 24 - 203
Target Start/End: Original strand, 38345727 - 38345903
Alignment:
Q  24 ggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattg 123  Q
    |||||| ||||| ||||||||||||||||||||| ||||||||||| || |||  |||||  |||||| ||||| ||||| ||||  ||||| |||||||    
T  38345727 ggacccgtttggattggcttatttttgagcttat-aaaaatagcttatgtaaataaataagcttttatgttaattcataagttctggctaataaaaattg 38345825  T
Q  124 tatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||||||||       |||||| ||| ||||||| |||||||||| |||||||||||||||||||||| |||||    
T  38345826 tatcttcataagttg-ttttttcataaactactttgacaa-cttatgaatactacataaaagcttatttatttggataag 38345903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 48 - 193
Target Start/End: Complemental strand, 41229061 - 41228917
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 147  Q
    |||||||||||||||||||||| ||||||  ||| |  |||||| ||||| ||||| |||| ||||||||||||||||||||||| |||||       ||    
T  41229061 ttgagcttatgaaaaatagcttatgcaaataaattagcttttatattaattcataagttctaactaatgaaaattgtatcttcatcagttg-ttttttca 41228963  T
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttattta 193  Q
    |||| |||||| |||||||||||||||||| |||||||| ||||||    
T  41228962 taaactaccttaacaagcttatgaataataaataaaagcctattta 41228917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 7148946 - 7148776
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| ||||||| |||||||||||||| |||||| ||||||  |||||  ||||||  |||| ||||| |||| ||||| ||||||||||| ||     
T  7148946 tttggattgacttatttctgagcttatgaaaa-tagcttatgcaaataaataagcttttatgctaattcataagttctgactaaagaaaattgtattttt 7148848  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| ||       || ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7148847 ataagctgtttttt-caaaaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataag 7148776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 23335817 - 23335646
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| ||||||||| ||||||||| ||||||||  |||||   || || ||||||| ||||| ||||| |||||||| |||||||||||||||||    
T  23335817 tttggattgccttattttttagcttatgagaaatagctaatgcaattaaacaagtttttatgttaattcataagttctcacttatgaaaattgtatcttc 23335718  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| ||       |||||| |||||||| | ||||||||||||||||||||| || ||||||||| |||||    
T  23335717 ataagctg-ttttttcataaactaccttgatatgcttatgaataatacataaaatctcatttatttgcataag 23335646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 191
Target Start/End: Original strand, 46704201 - 46704340
Alignment:
Q  51 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataa 150  Q
    ||||||||||||||| ||| ||||||  | ||| ||||||| ||||| ||||| |||||||||||||||||| |||||||||||| ||       |||||    
T  46704201 agcttatgaaaaataacttatgcaaataagtaactttttatattaattcataagttctcactaatgaaaattttatcttcataagctg-ttttttcataa 46704299  T
Q  151 attaccttgacaagcttatgaataatacataaaagcttatt 191  Q
    | |||||| ||||||| |||||||||| |||||||||||||    
T  46704300 actaccttaacaagctcatgaataataaataaaagcttatt 46704340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 488295 - 488466
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| |||| |||| ||||||| ||||||||||| || |||  |||||  |||||| ||||| ||||| ||||||||||| |||||||||||||     
T  488295 tttggattgacttacttttaagcttataaaaaatagcttatggaaataaataagcttttatgttaattcataagttctcactaataaaaattgtatcttt 488394  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    | |||          |||||| ||||||||||||||||| ||||||||||||||||||| ||||||| |||||    
T  488395 acaagca-attttttcataaactaccttgacaagcttattaataatacataaaagcttacttatttgcataag 488466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 196
Target Start/End: Complemental strand, 948250 - 948083
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattt--taatacataaattctcactaatgaaaattgtatct 128  Q
    ||||| ||| |||||||||||||||||||| | |||||| ||||||  |||||  |||||| |  |||| ||||| ||||| || |  ||||||||||||    
T  948250 tttggattgacttatttttgagcttatgaagagtagcttatgcaaatgaataagcttttatgtgttaattcataagttctctctgacaaaaattgtatct 948151  T
Q  129 tcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    | ||||| ||       |||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  948150 ttataagctgtttttttcataaactaccttgacaaagttatgaataatacataaaagcttatttattt 948083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 48687108 - 48687006
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| |||||||||||||||||||||| |||||| ||||||  |||||| || ||| ||||| ||||| |||||||||||||||||||||||||     
T  48687108 tttggattgccttatttttgagcttatgaaaa-tagcttatgcaaataaataaacttatatgttaattcataagttctcactaatgaaaattgtatcttt 48687010  T
Q  131 ataa 134  Q
    ||||    
T  48687009 ataa 48687006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 203
Target Start/End: Complemental strand, 897137 - 896974
Alignment:
Q  39 ggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    ||||||||||| | |||||||||||||| || ||||||  |||||  |||||| |||||  |||| || ||||||| |||||| |||||| | ||| |||    
T  897137 ggcttattttttaacttatgaaaaatagtttatgcaaataaataagcttttatattaatttataagttttcactaacgaaaatcgtatctacgtaaattg 897038  T
Q  139 nnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
           |||||| ||| ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  897037 tttttt-cataaactacattgacaagcttatgaataatacataaaagtttatttatttgcataag 896974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 28 - 192
Target Start/End: Complemental strand, 32628956 - 32628793
Alignment:
Q  28 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc 127  Q
    |||||||| ||||||||||||||| ||||||||||||||||| || |||   |   | |||||| ||||| | ||| |||||||| || |||||||||||    
T  32628956 ccatttggattggcttatttttgaccttatgaaaaatagcttatgtaaatatacctacttttatgttaattcgtaagttctcactgatcaaaattgtatc 32628857  T
Q  128 ttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttattt 192  Q
    |||| ||| ||       |||||||||||| ||||||||||||||||| ||| ||||||||||||    
T  32628856 ttcacaagctgtttttt-cataaattacctcgacaagcttatgaataacacaaaaaagcttattt 32628793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 42611779 - 42611950
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttt-tgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 129  Q
    ||||| ||||| ||||||| |||||||||||||||| ||| ||||||  |||||  |||||| ||||| ||||| || ||||| | ||||| ||||||||    
T  42611779 tttggattggcgtatttttaagcttatgaaaaatagatttatgcaaataaataagcttttatgttaattcataagttgtcact-acgaaaactgtatctt 42611877  T
Q  130 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatacata-aaagcttatttatttgaataag 203  Q
    |||||||||       |||||| || || ||||||||||||||||||||||| |||||||||||||||| |||||    
T  42611878 cataagttg-ttttttcataaacta-ctcgacaagcttatgaataatacatataaagcttatttatttgcataag 42611950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 202
Target Start/End: Original strand, 18424211 - 18424358
Alignment:
Q  53 cttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaat 152  Q
    ||||||||||||||||  || |||  |||||  |||||| ||||| ||||| || ||| |||  |||||||||||||||||| |||       ||||||     
T  18424211 cttatgaaaaatagctcatgaaaataaataagcttttatgttaattcataagttttcaataacaaaaattgtatcttcataaattgttttt--cataaac 18424308  T
Q  153 taccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||||| ||||| |||||||||||||||||||||||||||||||| ||||    
T  18424309 taccttcacaagtttatgaataatacataaaagcttatttatttgtataa 18424358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 18630821 - 18630961
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    |||||||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| |||||||||| ||||| | |||||||||||| ||           
T  18630821 ttttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcactaacgaaaactttatcttcataagctg-tttttt 18630919  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagct 187  Q
    |||||| |||||| ||||||| ||| |||||| |||||||||    
T  18630920 cataaactaccttaacaagctcatggataataaataaaagct 18630961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 36254948 - 36255051
Alignment:
Q  32 ttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttca 131  Q
    |||| ||| |||||||||  |||||||||||||||||| |||| |  |||||  |||||| ||||| ||||| ||||||||||| |||||||||||||||    
T  36254948 ttggattgacttatttttttgcttatgaaaaatagcttatgcagataaataagcttttatgttaattcataagttctcactaattaaaattgtatcttca 36255047  T
Q  132 taag 135  Q
    ||||    
T  36255048 taag 36255051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 138
Target Start/End: Original strand, 2330394 - 2330491
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    ||||||||||||||||||||||| | | | |||| |  |||||| |||||||||| | ||||| ||||||| ||||||||||||||||||||| ||||    
T  2330394 cttatttttgagcttatgaaaaacaacctatgcagataaataaacttttattttatttcataagttctcacaaatgaaaattgtatcttcatacgttg 2330491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 22273967 - 22273851
Alignment:
Q  20 caaaggacccatttgggttggcttatttttg-agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaa 118  Q
    |||||| ||| ||||| || ||||||||||  |||||| ||||||||| || ||||||  |||||| |||||| ||||| ||||| ||||||||||  ||    
T  22273967 caaagggcccgtttggattagcttatttttttagcttacgaaaaatagattatgcaaataaataaacttttatgttaattcataacttctcactaacaaa 22273868  T
Q  119 aattgtatcttcataag 135  Q
    |||||||||||||||||    
T  22273867 aattgtatcttcataag 22273851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 34526258 - 34526351
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||| ||| ||||||||||||||||| || ||||||  |||||  |||||| ||||| ||||| |||||||||  |||||||||||||||||||    
T  34526258 cttactttcgagcttatgaaaaatagtttatgcaaataaataagcttttatgttaattcataagttctcactatggaaaattgtatcttcataa 34526351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 43699508 - 43699565
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  43699508 cataaactacattgacaagcttatgaataagacataaaagcttatttatttgtataag 43699565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 4603258 - 4603346
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||||  || || |||  |||||  ||||||||||||  ||||| ||||||||| |||||||||||||||||||    
T  4603258 ttttgagcttatgaaaaatattttatgtaaataaataagcttttattttaatttataaactctcactaacgaaaattgtatcttcataa 4603346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 9153508 - 9153588
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtat 126  Q
    ||||||||| || ||||||||||| ||||||  |||||| |||||| |||||  ||||||||||||| |||||||||||||    
T  9153508 ttttgagctaattaaaaatagcttatgcaaataaataaacttttatgttaatttataaattctcactgatgaaaattgtat 9153588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 15179977 - 15179889
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || |||  |||||  ||||||||||||  |||| |||| ||||| ||||||||||| |||||||    
T  15179977 ttttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttctgactaacgaaaattgtattttcataa 15179889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 19725454 - 19725366
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaattttt-attttaatacataaattctcactaatgaaaattgtatcttcata 133  Q
    |||||||||||||||||||||||| || |||  ||||| ||||| ||||||||  ||||  ||||||||||||||||| ||||||||||    
T  19725454 ttttgagcttatgaaaaatagcttatgtaaaaaaataagttttttattttaatttataagctctcactaatgaaaattatatcttcata 19725366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 39931471 - 39931558
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||||| | || |||  ||||| ||||||||||| |  ||||  ||||||||| |||||||||||||||||||    
T  39931471 tttgagcttatgaaaaatagcatatgtaaataaataagtttttattttattttataagctctcactaacgaaaattgtatcttcataa 39931558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 42617157 - 42617244
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||||||| || |||  ||||| |||||||||||||  |||| || ||||||| ||||||  |||||||||||    
T  42617157 tttgagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagttttcactaacgaaaatcatatcttcataa 42617244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 11298742 - 11298656
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 132  Q
    |||||||||||||||||||||||| ||||||  |||||| ||||||  |||| | ||| |||||||||| ||||| | |||||||||    
T  11298742 ttttgagcttatgaaaaatagcttatgcaaataaataaacttttataataattcttaagttctcactaacgaaaactttatcttcat 11298656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 42153073 - 42153171
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 129  Q
    ||||| |||||||||||||||||||| | |||||||||| ||||||  |||||  |||||| ||||| ||| | || ||||||| |||||||| |||||    
T  42153073 tttggattggcttatttttgagcttacgtaaaatagcttatgcaaataaataagcttttatgttaattcatgagttgtcactaacgaaaattgcatctt 42153171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 35124448 - 35124391
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| |||||||||||||||||||||| |||||||||| |||| |||||| |||||    
T  35124448 cataaactaccttgacaagcttatgaatagtacataaaaggttatatatttgcataag 35124391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 203
Target Start/End: Original strand, 52274100 - 52274202
Alignment:
Q  100 ataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaa 199  Q
    |||| |||||||| | |||||||||||||||||||| ||       | |||| |||||||| |||||||| ||||||||||||||| ||||||||||| |    
T  52274100 ataagttctcactgacgaaaattgtatcttcataagctgtttttt-cgtaaactaccttgataagcttatcaataatacataaaagtttatttatttgca 52274198  T
Q  200 taag 203  Q
    ||||    
T  52274199 taag 52274202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 15184706 - 15184618
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||| ||||||| ||||||||||| |  ||   ||||| |||||||||||||  |||| |||||||||| |||||||||||||||||||    
T  15184706 ttttaagcttatcaaaaatagcttatataagcaaataagtttttattttaatttataagttctcactaacgaaaattgtatcttcataa 15184618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 41071525 - 41071421
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||||||||| ||| |||||||||||||||||||  | |||  |||||  |||||| |||||  | || ||||||||||||| ||||||| ||||    
T  41071525 tttggattggcttatattttagcttatgaaaaatagcttaagaaaataaataagcttttatgttaatttacaagttctcactaatgagaattgtaacttc 41071426  T
Q  131 ataag 135  Q
    |||||    
T  41071425 ataag 41071421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 43213437 - 43213532
Alignment:
Q  42 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    |||||||||||||  ||||||||| ||| ||||||  ||||||||||||| ||||| ||| | || ||| |||  ||||||||||||||||||||||    
T  43213437 ttatttttgagctcgtgaaaaataacttatgcaaataaataaatttttatgttaattcat-agttatcattaacaaaaattgtatcttcataagttg 43213532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 48667845 - 48667741
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||||||||||||| |||| |||||||||||||| ||||||  |||||  |||||| ||||| ||||| |||| | | | |||||| |||||| |    
T  48667845 tttggattggcttatttttaagctcatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctgagtgaggaaaatagtatctcc 48667746  T
Q  131 ataag 135  Q
    |||||    
T  48667745 ataag 48667741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 1374358 - 1374445
Alignment:
Q  116 gaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||||||||||||| ||       |||||| |||| |||||||||||||||| || ||||||| ||| |||||||| |||||    
T  1374358 gaaaattgtatcttcataagctggttttttcataaactaccatgacaagcttatgaatcatgcataaaaacttttttatttgcataag 1374445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 3564281 - 3564231
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||||| ||||||||||| ||||||||||||| ||||||| ||||||||||    
T  3564281 cataaactaccttgacaaacttatgaataatatataaaagtttatttattt 3564231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 3564381 - 3564315
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaat 97  Q
    ||||| ||| ||||||||||||||||||||||||||||| ||||||  |||||  |||||| |||||    
T  3564381 tttggattgacttatttttgagcttatgaaaaatagcttatgcaaataaataatcttttatgttaat 3564315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 8130542 - 8130492
Alignment:
Q  153 taccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||| |||||| |||||||||||| |||||||||||||||||||| |||||    
T  8130542 taccctgacaaacttatgaataatgcataaaagcttatttatttgcataag 8130492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 8130634 - 8130560
Alignment:
Q  51 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgta 125  Q
    ||||||||||||||||||| ||||||  ||||| ||||||| ||||| ||||| || |||||||  |||||||||    
T  8130634 agcttatgaaaaatagcttgtgcaaataaataagtttttatgttaattcataagttttcactaacaaaaattgta 8130560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 184
Target Start/End: Original strand, 21216353 - 21216391
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaa 184  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  21216353 cataaactaccttgacaagcttatgaataatacataaaa 21216391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 22303221 - 22303167
Alignment:
Q  80 ataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||| |||||||||||||  ||||| | |||||||||||||||||||||||||||    
T  22303221 ataagtttttattttaatttataaactttcactaatgaaaattgtatcttcataa 22303167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 203
Target Start/End: Original strand, 27368188 - 27368234
Alignment:
Q  157 ttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  27368188 ttgacaaacttatgaataatatataaaagcttatttatttgcataag 27368234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 39932729 - 39932836
Alignment:
Q  95 aatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttat 194  Q
    |||| |||| |||||||||||  ||||||||||||||||| |||       |||| | |||||| |||| ||||| ||||||||||||||| ||||||||    
T  39932729 aataaataagttctcactaatagaaattgtatcttcataaattgtttttt-catacactaccttaacaatcttataaataatacataaaagtttatttat 39932827  T
Q  195 ttgaataag 203  Q
    ||| |||||    
T  39932828 ttgcataag 39932836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 43699369 - 43699455
Alignment:
Q  40 gcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtat 126  Q
    |||||||||| | || || ||||||||||| ||||||  ||||| ||||||| ||||| ||||| ||| ||||| ||||||||||||    
T  43699369 gcttattttttatctcattaaaaatagcttatgcaaataaataagtttttatgttaattcataagttcccactagtgaaaattgtat 43699455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 212973 - 213029
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| |||||| |||||||||||||||||| |||||| |||||||||||| |||||    
T  212973 cataaactaccttaacaagcttatgaataataaataaaa-cttatttatttgcataag 213029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 23297406 - 23297451
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 76  Q
    ||||| |||||||||||||||||||||| |||||||||| ||||||    
T  23297406 tttggattggcttatttttgagcttatgcaaaatagcttatgcaaa 23297451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 174
Target Start/End: Complemental strand, 28663747 - 28663606
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| |||||||||||||||||||||||||| || |||||   | |||  |||||| ||| | ||||| |||||| ||| |||||||||||||||    
T  28663747 tttggattgacttatttttgagcttatgaaaaatagtttatgcaactaattaagcttttatgttagttcataagttctca-taacgaaaattgtatcttc 28663649  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaata 174  Q
    | ||  ||       |||||| ||||||||||||||||||||||    
T  28663648 agaatctg-ttttttcataaactaccttgacaagcttatgaata 28663606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 135
Target Start/End: Complemental strand, 35405851 - 35405755
Alignment:
Q  38 tggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataag 135  Q
    |||||||||||| ||||||||||||||||||| ||||||  |||||  |||||| |||||  || |  ||| ||||| ||||||| ||||||||||||    
T  35405851 tggcttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgttaattaat-aggtcttactaacgaaaattctatcttcataag 35405755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 48722002 - 48721889
Alignment:
Q  24 ggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattg 123  Q
    |||||| ||||  ||| ||||||||| ||||||| |||||||  || | ||||  |||||  |||||| ||||| ||||| ||||||||||  ||||||     
T  48722002 ggacccgtttgaattgacttattttttagcttataaaaaataatttatacaaataaataagcttttatattaattcataagttctcactaacaaaaatta 48721903  T
Q  124 tatcttcataagtt 137  Q
    ||||||||||||||    
T  48721902 tatcttcataagtt 48721889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 2547973 - 2548061
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||| ||| ||||| ||||||  ||||| ||||||| |||||  |||| |||||| ||  ||||||| |||||||||||    
T  2547973 ttttgagcttatgagaaagagcttatgcaaataaataagtttttatattaatttataagttctcattagcgaaaattttatcttcataa 2548061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 4331398 - 4331350
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttat 194  Q
    |||||| |||||||||||  |||||||||||| ||||||||||||||||    
T  4331398 cataaactaccttgacaaagttatgaataataaataaaagcttatttat 4331350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 8057120 - 8057164
Alignment:
Q  153 taccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||    
T  8057120 taccttgacaagcttatgaataataaataaaaacttatttttttg 8057164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 19414275 - 19414187
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||| |||||||||||||||| || |||  |||||  |||||||||| |  ||||  ||||||||| |||||||||||||| ||||    
T  19414275 ttttgagtttatgaaaaatagcttatgtaaataaataagcttttattttactttataagctctcactaacgaaaattgtatcttaataa 19414187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 22117513 - 22117425
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || |||   ||||  ||||||||||||  |||| |||| ||||| |||||||| || |||||||    
T  22117513 ttttgagcttatgaaaaatagcttatgtaaatagataagcttttattttaatctataagttctgactaacgaaaattgcattttcataa 22117425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 29615421 - 29615385
Alignment:
Q  160 acaagcttatgaataatacataaaagcttatttattt 196  Q
    |||||||||||||||||||||| ||||||||||||||    
T  29615421 acaagcttatgaataatacatataagcttatttattt 29615385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 47202985 - 47202897
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||| ||| |  |||  | |||  ||||||||||||  ||||  ||||||||| |||||||||||||||||||    
T  47202985 ttttgagcttatgaaaaataacttatataaataagtaagcttttattttaatttataagatctcactaacgaaaattgtatcttcataa 47202897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 48686999 - 48686959
Alignment:
Q  157 ttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  48686999 ttgacaagcttatgaatagtacataaaaacttatttatttg 48686959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 1374487 - 1374436
Alignment:
Q  25 gacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 76  Q
    ||||||||||| |||||||||||||||||||||| |||| | ||| ||||||    
T  1374487 gacccatttggattggcttatttttgagcttatgcaaaaaaacttatgcaaa 1374436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 11679054 - 11679141
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||| ||||||||||| | ||||  || ||  |||||| |||||  ||||||| | ||||| |||||||||||||||||||    
T  11679054 tttgagcttatcaaaaatagcttatacaaataaaaaacattttatgttaatttataaattttaactaacgaaaattgtatcttcataa 11679141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 11687333 - 11687420
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||| ||||||||||| | ||||  || ||  |||||| |||||  ||||||| | ||||| |||||||||||||||||||    
T  11687333 tttgagcttatcaaaaatagcttatacaaataaaaaacattttatgttaatttataaattttaactaacgaaaattgtatcttcataa 11687420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 197
Target Start/End: Complemental strand, 18258178 - 18258021
Alignment:
Q  32 ttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttca 131  Q
    |||| ||| |||||||||||||||||  |||||| ||| | ||||  |||||| ||||||||     ||||| || ||||||| |||||||||| |||||    
T  18258178 ttggattgtcttatttttgagcttatagaaaataacttatacaaataaataaacttttattt-----cataagttttcactaacgaaaattgtaacttca 18258084  T
Q  132 taagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||||       || |||  | ||||| ||| ||||||||||||||||||| ||||||||||||    
T  18258083 taagttg--tttttcaaaaaacatcttgataagtttatgaataatacataaaa-cttatttatttg 18258021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 23284750 - 23284805
Alignment:
Q  79 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||| |||||||||||||  ||||  ||||||||| |||||||||||||||||||    
T  23284750 aataagtttttattttaatttataagctctcactaacgaaaattgtatcttcataa 23284805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 2702643 - 2702733
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    ||||||||| |||||| ||| | ||||||  | |||  |||||| ||||| |||||  ||| ||||||||||||||||| |||||||||||    
T  2702643 ttgagcttacgaaaaagagcatatgcaaataattaagcttttatgttaattcataagatcttactaatgaaaattgtatattcataagttg 2702733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 11256598 - 11256676
Alignment:
Q  57 tgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataag 135  Q
    |||||||||| || ||||||  |||||  |||||| ||||| ||||| ||||| ||||  |||||||||||||||||||    
T  11256598 tgaaaaatagtttatgcaaataaataagcttttatgttaattcataagttctcgctaactaaaattgtatcttcataag 11256676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 29996678 - 29996720
Alignment:
Q  160 acaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||    
T  29996678 acaaacttatgaataatatataaaagcttatttatttgcataa 29996720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 30956849 - 30956787
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataa 103  Q
    ||||||||| ||||||||||||||||||| ||||||  ||||| ||||||  ||||| |||||    
T  30956849 cttattttttagcttatgaaaaatagcttatgcaaataaataagtttttacattaattcataa 30956787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 35010272 - 35010222
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||||| ||| ||||||| ||||| |||||||||||||| |||||||||||    
T  35010272 cataaactacgttgacaaacttataaataatacataaaaacttatttattt 35010222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 76
Target Start/End: Original strand, 35124346 - 35124400
Alignment:
Q  22 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 76  Q
    |||| ||||||||| ||| |||||||||||||||||| |||| ||||| ||||||    
T  35124346 aagggcccatttggattgacttatttttgagcttatgcaaaacagcttatgcaaa 35124400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 40699330 - 40699384
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttat 91  Q
    |||||||||| ||||||||||| |||| ||||| ||||||  |||||||||||||    
T  40699330 ttggcttattattgagcttatgcaaaacagcttatgcaaataaataaatttttat 40699384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 202
Target Start/End: Original strand, 55638120 - 55638162
Alignment:
Q  160 acaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||| |||||||||||||||||||||||| |||||||| ||||    
T  55638120 acaaacttatgaataatacataaaagcttgtttatttgcataa 55638162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 825743 - 825686
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| || || |||| |||||||||||||| | ||||||||||||||||| |||||    
T  825743 cataaactaactagacaggcttatgaataatatagaaaagcttatttatttgcataag 825686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 38515689 - 38515726
Alignment:
Q  158 tgacaagcttatgaataatacataaaagcttatttatt 195  Q
    |||||||||||||||||||||||| | |||||||||||    
T  38515689 tgacaagcttatgaataatacatagaggcttatttatt 38515726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 105
Target Start/End: Original strand, 38876054 - 38876107
Alignment:
Q  52 gcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaat 105  Q
    |||||||||||||||||| ||||||  |||||| |||||| ||||| |||||||    
T  38876054 gcttatgaaaaatagcttatgcaaataaataaacttttatgttaattcataaat 38876107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 43415328 - 43415365
Alignment:
Q  160 acaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  43415328 acaaccttatgaataatacataaaaacttatttatttg 43415365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 4331506 - 4331406
Alignment:
Q  30 atttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 129  Q
    |||||| || |||||| |||||| |||||||||||| ||| || |||  ||||| ||||||| ||||| ||||||||   ||||| |||| |||||| ||    
T  4331506 atttggatttgcttatctttgagtttatgaaaaataacttatgtaaataaataagtttttatgttaattcataaatttctactaacgaaagttgtatatt 4331407  T
Q  130 c 130  Q
    |    
T  4331406 c 4331406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 29997335 - 29997375
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagc 186  Q
    |||||| |||||||| |||||||||||||||| ||||||||    
T  29997335 cataaactaccttgataagcttatgaataatatataaaagc 29997375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 30956744 - 30956692
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacat-aaaagcttatttatttg 197  Q
    |||||| |||||||| |||||| ||| |||||||| |||||||||||||||||    
T  30956744 cataaactaccttgagaagcttgtgagtaatacataaaaagcttatttatttg 30956692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 34633510 - 34633459
Alignment:
Q  86 ttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    |||||| ||||| ||||| |||||||| ||||||||||||| |||||||||||    
T  34633510 ttttatgttaattcataagttctcacttatgaaaattgtat-ttcataagttg 34633459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 43699601 - 43699569
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaa 63  Q
    ||||| |||||||||||||||||||||||||||    
T  43699601 tttggattggcttatttttgagcttatgaaaaa 43699569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 203
Target Start/End: Original strand, 43983408 - 43983464
Alignment:
Q  147 ataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| || ||| |||||||||| |||||||||| || ||||||||||||| |||||    
T  43983408 ataaactatcttaacaagcttataaataatacattaatgcttatttatttgtataag 43983464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 46650312 - 46650276
Alignment:
Q  166 ttatgaataatacataaaagcttatttatttgaataa 202  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  46650312 ttatgaataatacatgaaagcttatttatttgcataa 46650276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 3e-36; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 22 - 197
Target Start/End: Original strand, 33321214 - 33321388
Alignment:
Q  22 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaat 121  Q
    |||| ||||||||| |||||||||||||||||||||| |||||||||| ||||||  ||||||  ||||| ||||| || ||  |||||||||  |||||    
T  33321214 aagggcccatttggattggcttatttttgagcttatgtaaaatagcttatgcaaataaataaacctttatgttaattcacaagctctcactaacaaaaat 33321313  T
Q  122 tgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||||||||||| ||       |||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  33321314 tgtatcttcataagctg-ttttttcataaactaccttgacaagcttatgaataagacataaaagcttatttatttg 33321388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 4027093 - 4026930
Alignment:
Q  38 tggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagtt 137  Q
    |||||||||||| ||||||||||||||||||| ||||||  |||||  | |||| ||||| ||||| ||||||||||  ||||||||||||||||||| |    
T  4027093 tggcttatttttaagcttatgaaaaatagcttatgcaaataaataagctattatgttaattcataagttctcactaacaaaaattgtatcttcataagct 4026994  T
Q  138 gnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |       |||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  4026993 g-ttttttcataaactaccttgacaagcttatg-ataatacataaaagcttatttatttgcataag 4026930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 31 - 189
Target Start/End: Original strand, 36501426 - 36501583
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||||||||||||||||||| ||||||||||||| ||||||  |||||  |||||| ||||| ||| | |||||||||| | ||||| |||||||    
T  36501426 tttggattggcttatttttgagcttgtgaaaaatagcttatgcaaataaataagcttttatgttaattcatgagttctcactaacgcaaattttatcttc 36501525  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagctta 189  Q
    ||||| ||       |||||| |||||||||||||||||||||||||||||||| ||||    
T  36501526 ataagctg-ttttttcataaactaccttgacaagcttatgaataatacataaaaactta 36501583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 887587 - 887416
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| |||||| |||||| ||||| ||||||| ||||| ||||||   ||||  |||||| ||||| ||||| ||||  ||||||||||||||||||||    
T  887587 tttggattggctaattttttagcttttgaaaaacagcttatgcaaatagataagcttttatgttaattcataagttcttgctaatgaaaattgtatcttc 887488  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||  |       |||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  887487 ataagcaggtttta-cataaactaccttgacaagcttatgaataatacaaaaaagcttatttatttgcataag 887416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 21788615 - 21788460
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 147  Q
    |||||||||||||||||| ||| ||||||  |||||  |||||| ||||| |||||  ||||||||| ||||||| |||||||||||||||       ||    
T  21788615 ttgagcttatgaaaaataacttatgcaaataaataagcttttatattaattcataagctctcactaacgaaaattttatcttcataagttg-ttttttca 21788517  T
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataaga 204  Q
    |||| || ||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  21788516 taaactatcttaacaagcttatgaataataaataaaagcttatttatttgcataaga 21788460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 41 - 203
Target Start/End: Original strand, 25836634 - 25836794
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 140  Q
    |||||||||||||||||||| |||| ||| ||||||  |||||  |||||| ||| | ||||| |||||||||| || |||||| ||||||||||  |      
T  25836634 cttatttttgagcttatgaagaataccttatgcaaataaataagcttttatgttatt-cataagttctcactaacgataattgtgtcttcataagccgtt 25836732  T
Q  141 nnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
         |||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  25836733 tttt-cataaactaccttgacaagcttatgaataatacataaaagcatatttatttgcataag 25836794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 40 - 203
Target Start/End: Complemental strand, 4004985 - 4004823
Alignment:
Q  40 gcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgn 139  Q
    ||||||||||||| |||||||||||||||| |||| |  || ||  ||||||  |||| ||||| |||||||||| |||||||||| ||||||||||||     
T  4004985 gcttatttttgagtttatgaaaaatagcttatgcagataaaaaagcttttatagtaattcataagttctcactaacgaaaattgtagcttcataagttg- 4004887  T
Q  140 nnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
          |||||| ||| || | ||||||||||||| |||||||||| ||||||||||| |||||    
T  4004886 tattttcataaactactttaaaaagcttatgaatagtacataaaagattatttatttgcataag 4004823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 31 - 197
Target Start/End: Complemental strand, 8832632 - 8832464
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| ||||||||| ||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| || ||||||| ||||||||||||||     
T  8832632 tttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttttcactaacgaaaattgtatcttt 8832533  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatg---aataatacataaaagcttatttatttg 197  Q
     |||  ||       |||||| |||||||| |||||||||   |||||||||||||||||||||||||||    
T  8832532 ctaacctg-tgttttcataaactaccttgaaaagcttatgattaataatacataaaagcttatttatttg 8832464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 38216188 - 38216044
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 136  Q
    ||||||||||||| |||||| |||||||||||| ||||||  |||||  |||||| ||||  ||||| |||||||||| |||||||||||||||||| |     
T  38216188 ttggcttattttttagcttacgaaaaatagcttatgcaaataaataagcttttatgttaactcataagttctcactaacgaaaattgtatcttcatatgc 38216089  T
Q  137 tgnnnnnnncataaattaccttgacaagcttatgaataatacataa 182  Q
    |        | |||| ||||||||||||||||||||||||||||||    
T  38216088 t-attttttcctaaactaccttgacaagcttatgaataatacataa 38216044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 46 - 185
Target Start/End: Complemental strand, 39592407 - 39592271
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    |||||||||||||||||||||||| ||||||| |||||  |||| |||  || |||||||||||||||| ||||||| ||||||| |||| |            
T  39592407 ttttgagcttatgaaaaatagcttatgcaaagaaataagcttttgttt--attcataaattctcactaaagaaaattatatcttcttaagct-ttatttt 39592311  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaag 185  Q
    |||||| |||||||||||||||||||||||| ||||||||    
T  39592310 cataaactaccttgacaagcttatgaataatgcataaaag 39592271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 23 - 203
Target Start/End: Complemental strand, 29774928 - 29774749
Alignment:
Q  23 aggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaatt 122  Q
    ||||||| ||||| ||| |||||||||||||| | ||||||||| ||  |||||  |||||  |||||  ||||| ||||| |||||||||| |||||||    
T  29774928 aggacccgtttggattgacttatttttgagctaacgaaaaatagtttaagcaaataaataagcttttacgttaattcataagttctcactaacgaaaatt 29774829  T
Q  123 gtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||| ||||||||  |       |||||| |||||| |||| || ||||||||| |||||||| ||||||||||| |||||    
T  29774828 gtattttcataagccg-ttttttcataaactaccttaacaaactaatgaataatgcataaaagtttatttatttgcataag 29774749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 183
Target Start/End: Complemental strand, 4533487 - 4533346
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 140  Q
    ||||||||||||||||||||||||||||| ||||||  |||||  || |||  |||| ||||| || |||||||  |||||||||| ||||| |||||      
T  4533487 cttatttttgagcttatgaaaaatagcttatgcaaataaataagcttctatgctaattcataagttgtcactaacaaaaattgtatattcatgagttgtt 4533388  T
Q  141 nnnnncataaattaccttgacaagcttatgaataatacataaa 183  Q
         |||||||||| |||||||| || |||||||||||||||    
T  4533387 tttatcataaattactttgacaagatt-tgaataatacataaa 4533346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 203
Target Start/End: Complemental strand, 11777142 - 11776988
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 147  Q
    |||||||||| ||||||||||| ||||||  |||||  |||||| ||| |  |||| ||||||||||  |||| |||||||||||||| ||       ||    
T  11777142 ttgagcttattaaaaatagcttctgcaaataaataaggttttatgttagtttataagttctcactaacaaaaagtgtatcttcataagctgtgtttt-ca 11777044  T
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||| || ||| |||||||||| |||||||||||||||||||||||| || |||||    
T  11777043 taaactaacttaacaagcttataaataatacataaaagcttatttatatgcataag 11776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 7480821 - 7480917
Alignment:
Q  42 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    |||| ||| ||||||| |||||||| || ||||||  ||||| ||||||| ||||| ||||| |||| ||||||||||||||||||||| |||||||    
T  7480821 ttatcttttagcttataaaaaatagattatgcaaataaataagtttttatgttaattcataagttctgactaatgaaaattgtatcttcctaagttg 7480917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 8441618 - 8441530
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||  | || ||||||  ||||| |||| |||||||| |||||||||||||||| |||||||||| ||||||||    
T  8441618 ttttgagcttatgaaaaagtgtttatgcaaataaataagttttaattttaattcataaattctcactaaagaaaattgtaccttcataa 8441530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 202
Target Start/End: Original strand, 13056238 - 13056408
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| |||||||||| |||||||||| |||||||| || | ||||   ||||  ||| || ||||| ||||| |||||  ||| |||||||| ||||||    
T  13056238 tttggattggcttattgttgagcttatcaaaaatagtttatacaaatagataagctttaatgttaattcataagttctcgttaacgaaaattgcatcttc 13056337  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    ||||| |         ||||| |||||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  13056338 ataagctattttttt-ataaactaccttgacaagcttatgaaaaatacataaaagcttatctatttgcataa 13056408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 35515429 - 35515509
Alignment:
Q  54 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||| ||||| | ||||  ||||||||||||| ||||| |||||| ||||||||||||||||| || ||||||||    
T  35515429 ttatgaaaaagagcttatacaaataaataaatttttatcttaattcataaactctcactaatgaaaattataccttcataa 35515509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 755726 - 755818
Alignment:
Q  105 ttctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    ||||||||||  ||||||||||||||||||| ||       |||||| |||| | |||||||| ||||||||||||||||||||| |||||||    
T  755726 ttctcactaacaaaaattgtatcttcataagctgtttttttcataaactaccgtaacaagcttctgaataatacataaaagcttaattatttg 755818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 33321428 - 33321485
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||||||||||||||||||| |||||||||||| |||| ||||||| |||||    
T  33321428 cataaactaccttgacaagcttatgagtaatacataaaaacttaattatttgcataag 33321485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 34913415 - 34913472
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| || ||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  34913415 cataaactatcttaacaaacttatgaataatacataaaagcttatttatttgcataag 34913472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 15155973 - 15155824
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    |||||||||||||||||| ||||| || |||  ||||| ||||||| ||||| ||||| |||||| ||| | |||||||| |||| ||| |||           
T  15155973 ttttgagcttatgaaaaagagcttatgaaaataaataagtttttatcttaattcataagttctcattaacggaaattgtaccttcttaaattg-tttttt 15155875  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||||| | | || ||||| |||| |||||||||||||||| |||||||||    
T  15155874 cataaacttcattaacaagattataaataatacataaaagcatatttattt 15155824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 22898283 - 22898371
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || |||  |||||  ||||||||||||  |||| || | ||||| ||||||||||| |||||||    
T  22898283 ttttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttttgactaacgaaaattgtattttcataa 22898371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 5903713 - 5903537
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaat-----tctcactaatgaaaattgta 125  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||  |||||  |||||| || || | ||| |     |||||||||  |||||||||    
T  5903713 tttggattggcttatttttgagctcatgaaaaatagcttatgcaaataaataagcttttatgtttattcttaagttctcatctcactaacaaaaattgta 5903614  T
Q  126 tcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||| ||       ||| || ||| ||||||||||||||| |||||||  || |||| |||||||| |||||    
T  5903613 tcttcataagatg-ttttttcattaactactttgacaagcttatgagtaatacactaatgcttgtttatttgcataag 5903537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 87 - 203
Target Start/End: Original strand, 12238453 - 12238565
Alignment:
Q  87 tttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagc 186  Q
    ||||| ||||| |||||  ||| ||||| ||||||||||| ||||||||||        |||||| |||||| |||||||||| |||||||||| || ||    
T  12238453 tttatgttaattcataagatcttactaacgaaaattgtatgttcataagtt----ttttcataaactaccttaacaagcttataaataatacattaatgc 12238548  T
Q  187 ttatttatttgaataag 203  Q
    ||||||||||| |||||    
T  12238549 ttatttatttgcataag 12238565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 2790095 - 2790153
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagc-ttatttatttgaataag 203  Q
    |||||| ||||||||||||||||| |||||| ||||||||| ||||||||||| |||||    
T  2790095 cataaaataccttgacaagcttatcaataatgcataaaagctttatttatttgcataag 2790153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 4090543 - 4090493
Alignment:
Q  153 taccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||||    
T  4090543 taccttgacaagattatgaataatacatcaaagtttatttatttgcataag 4090493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 11073007 - 11072949
Alignment:
Q  146 cataaattaccttgacaagcttatgaat-aatacataaaagcttatttatttgaataag 203  Q
    |||||| ||||||||||||||||||||| |||||| |||||||||||| |||| |||||    
T  11073007 cataaactaccttgacaagcttatgaatgaatacaaaaaagcttatttgtttggataag 11072949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 12223953 - 12223862
Alignment:
Q  105 ttctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    ||||||||||||||||| ||||||||||||  ||       |||||| |||||||||| ||||||||||||||||| |||| ||| |||||||    
T  12223953 ttctcactaatgaaaatggtatcttcataaactgtttttt-cataaactaccttgacaggcttatgaataatacatgaaaggttacttatttg 12223862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 32521972 - 32522058
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 132  Q
    ||||||||||||| |||||||||| || |||  ||||| ||| |||||||||  ||||  ||| ||||| |||||||||||||||||    
T  32521972 ttttgagcttatgtaaaatagcttatgtaaataaataagtttatattttaatttataagctcttactaacgaaaattgtatcttcat 32522058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 38471719 - 38471805
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||| ||||||||||| | ||| | ||||  |||||||| |||| ||||| ||||| |||||||||| |||||||||| ||||||||    
T  38471719 ttgaacttatgaaaaagaacttatacaaataaataaattgttatcttaattcataagttctcactaacgaaaattgtaccttcataa 38471805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 42839259 - 42839393
Alignment:
Q  58 gaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattacct 157  Q
    |||||||||||| |||||   |||||  |||||| |||||  |||| || || |||| |||||||| ||||||||||| ||       |||||| || ||    
T  42839259 gaaaaatagcttatgcaattaaataagcttttatgttaattgataagttttctctaacgaaaattgcatcttcataagctggtttt--cataaactaact 42839356  T
Q  158 tgacaagcttatgaataatacataaaagcttatttat 194  Q
    |||||| |||||||||||||||||||| |||||||||    
T  42839357 tgacaaacttatgaataatacataaaaacttatttat 42839393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 2790189 - 2790144
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 76  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||||    
T  2790189 tttgggttggcttatttttgagcttatgcaaaacagcttatgcaaa 2790144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 5903790 - 5903745
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 76  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||    
T  5903790 tttggattggcttatttttgagctcatgaaaaatagcttatgcaaa 5903745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 35731189 - 35731148
Alignment:
Q  156 cttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||||| || ||||||||||||||||||||||||||||||    
T  35731189 cttgacaaactcatgaataatacataaaagcttatttatttg 35731148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 37420090 - 37420009
Alignment:
Q  22 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataa 103  Q
    |||| ||||||||| ||||||||||||| |||||||||||||||  || ||||||  |||||  |||||| ||||| |||||    
T  37420090 aagggcccatttggattggcttattttttagcttatgaaaaataatttatgcaaataaataagcttttatgttaattcataa 37420009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 12683643 - 12683687
Alignment:
Q  158 tgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||    
T  12683643 tgacaagcttatgaataatacattaaaacttatttatttgcataa 12683687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 203
Target Start/End: Original strand, 27703500 - 27703540
Alignment:
Q  163 agcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  27703500 agcttatgaataatatataaaagcttatttatttgcataag 27703540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 29133704 - 29133748
Alignment:
Q  158 tgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||||| ||||||||||||||||||||| ||||||||||| ||||    
T  29133704 tgacaaacttatgaataatacataaaagattatttatttgcataa 29133748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 189
Target Start/End: Complemental strand, 12442874 - 12442831
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagctta 189  Q
    |||||| || ||||||||||||||||||||||| ||||||||||    
T  12442874 cataaactatcttgacaagcttatgaataatacctaaaagctta 12442831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 69
Target Start/End: Complemental strand, 37409811 - 37409780
Alignment:
Q  38 tggcttatttttgagcttatgaaaaatagctt 69  Q
    ||||||||||||||||||||||||||||||||    
T  37409811 tggcttatttttgagcttatgaaaaatagctt 37409780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 43787800 - 43787884
Alignment:
Q  117 aaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    ||||||||||||||||||||||       |||||  |||||  ||||| |||||||||||||||||||| ||||||||||| ||||    
T  43787800 aaaattgtatcttcataagttgtttttt-cataagctacctaaacaagtttatgaataatacataaaagtttatttatttgtataa 43787884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 446585 - 446499
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||  || || |||  | |||  ||||||||||||  ||||  ||||||||| |||||||||||||||||||    
T  446585 ttgagcttatgaaaaataatttatgtaaataagtaagcttttattttaatttataagctctcactaacgaaaattgtatcttcataa 446499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 14365264 - 14365230
Alignment:
Q  28 ccatttgggttggcttatttttgagcttatgaaaa 62  Q
    |||||||||||||||||||||| ||||||||||||    
T  14365264 ccatttgggttggcttatttttcagcttatgaaaa 14365230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 134
Target Start/End: Original strand, 2401555 - 2401636
Alignment:
Q  53 cttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||  || || |||  |||||||||||||||||||  |||| |||| |||||  |||||||||| |||||||    
T  2401555 cttatgaaaaataatttatgtaaataaataaatttttattttaatctataagttctgactaacaaaaattgtattttcataa 2401636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 12442991 - 12442934
Alignment:
Q  17 aaacaaaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgca 74  Q
    |||| |||||||| ||||| || ||||| |||||||||||||||||| ||||| ||||    
T  12442991 aaaccaaggacccgtttggattagcttaattttgagcttatgaaaaacagcttatgca 12442934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 22422071 - 22422163
Alignment:
Q  22 aaggacccatttgggttg-gcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaa 114  Q
    |||| ||||||||| ||| |||||||||  ||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  |||||||||    
T  22422071 aaggtcccatttggtttgagcttatttta-agcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctctcactaa 22422163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 41554625 - 41554662
Alignment:
Q  166 ttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  41554625 ttatgaataatacataaaagtttatttatttgtataag 41554662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 42382804 - 42382691
Alignment:
Q  22 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaat 121  Q
    |||||| | ||||| ||| ||||||||| ||||||||||||  || || || |||  ||||| ||||||| | ||| ||| | |||||||||| |||| |    
T  42382804 aaggactcgtttggattgacttatttttaagcttatgaaaagcagtttatgtaaatcaataagtttttatgtcaattcattagttctcactaacgaaatt 42382705  T
Q  122 tgtatcttcataag 135  Q
    || |||||||||||    
T  42382704 tgcatcttcataag 42382691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 43787739 - 43787788
Alignment:
Q  27 cccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 76  Q
    ||||||||| ||| ||||||||| |||||||||||||||| || ||||||    
T  43787739 cccatttggattgacttattttttagcttatgaaaaatagtttatgcaaa 43787788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 159 - 191
Target Start/End: Original strand, 27243575 - 27243607
Alignment:
Q  159 gacaagcttatgaataatacataaaagcttatt 191  Q
    |||||||||||||||||||| ||||||||||||    
T  27243575 gacaagcttatgaataatacgtaaaagcttatt 27243607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 30382195 - 30382279
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||||||||||||||||||| || || |||  |||||  |||| |||||||  ||||  | ||||||| |||||||||||||||    
T  30382195 ttttgagcttatgaaaaatagattatgtaaataaataagcttttgttttaatttataagctttcactaacgaaaattgtatcttc 30382279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 37419989 - 37420044
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||||| |||||||||||  |||||||| | ||||||||||||||||||||| ||||    
T  37419989 cataaactaccttgacaaaattatgaatta-acataaaagcttatttatttgcataa 37420044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 137
Target Start/End: Original strand, 38010582 - 38010689
Alignment:
Q  32 ttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttatt--ttaatacataaattctcactaatgaaaattgtatctt 129  Q
    |||| ||| ||||| ||||||||||||||||||||||| | ||||  ||||| ||||| ||  ||||| ||||| || |||||||  |||||| |||| |    
T  38010582 ttggattgtcttatctttgagcttatgaaaaatagcttatacaaataaataagtttttttttgttaattcataagttttcactaacaaaaattatatcat 38010681  T
Q  130 cataagtt 137  Q
     |||||||    
T  38010682 aataagtt 38010689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 86 - 134
Target Start/End: Complemental strand, 40301479 - 40301431
Alignment:
Q  86 ttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||  ||||| ||||||||| ||||| |||||||||||||    
T  40301479 ttttattttaatttataaactctcactaacgaaaagtgtatcttcataa 40301431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 42382666 - 42382622
Alignment:
Q  153 taccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    ||||||||||| |||||||||||||| || || ||||||||||||    
T  42382666 taccttgacaaacttatgaataatacgtacaaacttatttatttg 42382622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 44475478 - 44475526
Alignment:
Q  79 aataaatttttattttaatacataaattctcactaatgaaaattgtatc 127  Q
    ||||| ||||||| ||||| | ||| |||||||||||||||||||||||    
T  44475478 aataagtttttatgttaattcgtaagttctcactaatgaaaattgtatc 44475526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 203
Target Start/End: Complemental strand, 32975848 - 32975691
Alignment:
Q  45 tttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnn 144  Q
    ||||||||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| ||||||| ||  ||||||||||||||||||||||          
T  32975848 tttttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctcacaaacaaaaattgtatcttcataagttg-tgttt 32975750  T
Q  145 ncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
     |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  32975749 tcataaactaccttgacaagcttatgaataatatataaaagcttatttatttgcataag 32975691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 41 - 196
Target Start/End: Original strand, 34286485 - 34286638
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 140  Q
    |||||||||||||||||||||||||| || ||||||  |||||  |||||| ||||| ||||| ||||| |||| |||||||||||||||||||| ||      
T  34286485 cttatttttgagcttatgaaaaataggttatgcaaataaataagcttttatattaattcataagttctccctaacgaaaattgtatcttcataagctg-- 34286582  T
Q  141 nnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
         || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34286583 tttttcacaaactaccttgacaagcttatgaataatacataaaagcttatttattt 34286638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 43 - 203
Target Start/End: Complemental strand, 32131603 - 32131444
Alignment:
Q  43 tatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnn 142  Q
    |||||||||||||||||||||||| || ||||||   ||||  |||||| ||||| ||||| ||||||||| ||||||||||||||||||| ||||        
T  32131603 tatttttgagcttatgaaaaatagtttatgcaaatagataagcttttatgttaattcataagttctcactattgaaaattgtatcttcataggttg-ttt 32131505  T
Q  143 nnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
       |||||| ||||||||||| |||| ||||||| |||||||||||||||||||| |||||    
T  32131504 attcataaactaccttgacaaacttaggaataatgcataaaagcttatttatttgcataag 32131444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 202
Target Start/End: Original strand, 24350440 - 24350600
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 140  Q
    |||||||||||||||||||||| |||||| ||||||  |||||  |||||| ||||| ||||| |||| ||||| ||||||| |||||||||||| |       
T  24350440 cttatttttgagcttatgaaaactagcttatgcaaataaataagattttatgttaattcataagttcttactaacgaaaattatatcttcataagct-at 24350538  T
Q  141 nnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
         |||||||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||    
T  24350539 tttttcataaattacgttgacaagcttatgaataatatataaaagcttaattatttgcataa 24350600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 28879230 - 28879062
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattct--cactaatgaaaattgtatct 128  Q
    ||||| ||| ||||||||| ||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| ||||  ||||||  |||||     ||    
T  28879230 tttggattgacttattttttagcttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctttcactaacaaaaat-----ct 28879136  T
Q  129 tcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||||       |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28879135 tcataagttgttattt-cataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataag 28879062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 31 - 202
Target Start/End: Original strand, 10298838 - 10299007
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| |||||||||||||||||||||||| |||||||| |||||| ||   |  |||||| ||||| ||||| |||||| |||  ||||||||||||||    
T  10298838 tttggattggcttatttttgagcttatgaataatagcttatgcaaa-tagatagcttttatgttaattcataagttctcattaacaaaaattgtatcttc 10298936  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    ||||| ||       |||||| ||||||||||||||||||||| ||||| ||||| | ||||||||| ||||    
T  10298937 ataagctg-ttttttcataaactaccttgacaagcttatgaatgatacaaaaaagttaatttatttgcataa 10299007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 31 - 197
Target Start/End: Original strand, 16972267 - 16972433
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| |||| ||||||||||||  |||||||||| ||||||  |||||| |||||| || || ||||| || ||||||| |||||||||||||||    
T  16972267 tttggattgacttaattttgagcttattcaaaatagcttatgcaaataaataaacttttatattgattcataagttatcactaacgaaaattgtatcttc 16972366  T
Q  131 ataagttgnnnnnnncataaattacctt-gacaagcttatgaataatacataaaagcttatttatttg 197  Q
    ||||| ||       ||| || |||||| ||||| ||||||||||||||||| |||||||||||||||    
T  16972367 ataagctg-ttttttcatgaactaccttagacaaacttatgaataatacatacaagcttatttatttg 16972433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 51 - 203
Target Start/End: Original strand, 9131059 - 9131210
Alignment:
Q  51 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataa 150  Q
    ||||||||||||||||||| ||||||  |||||| |||||| ||||| ||||| |||  ||||| |||||||||||||||||||| ||       || ||    
T  9131059 agcttatgaaaaatagcttatgcaaataaataaacttttatgttaattcataagttccgactaacgaaaattgtatcttcataagctg-tttcttcagaa 9131157  T
Q  151 attaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    | ||  | ||||||||||| |||||||||||||||||||| |||||| |||||    
T  9131158 actaaatcgacaagcttataaataatacataaaagcttatatatttgcataag 9131210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 32212926 - 32213104
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc--- 127  Q
    ||||| |||||||||||||  |||||||||||||||||| ||||||  |||||  |||||| ||| |  |||| |||||||||||||||||||| ||       
T  32212926 tttggattggcttatttttttgcttatgaaaaatagcttatgcaaataaataagcttttatgttattttataagttctcactaatgaaaattgtgtcttc 32213025  T
Q  128 ---ttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
       ||| || | ||       |||||| || | |||||||||||||||||||||||||||||||||||||||| |||||    
T  32213026 ttattcttatgctgttattttcataaactaacctgacaagcttatgaataatacataaaagcttatttatttgcataag 32213104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 10213870 - 10213766
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| |||| |||||||||||||||||||||||||||| ||||||  |||||  || ||| ||||| ||||| ||||||||||  |||||||| |||||    
T  10213870 tttggattggattatttttgagcttatgaaaaatagcttatgcaaataaataagcttgtatgttaattcataagttctcactaacaaaaattgtttcttc 10213771  T
Q  131 ataag 135  Q
    |||||    
T  10213770 ataag 10213766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 46 - 203
Target Start/End: Original strand, 41145322 - 41145480
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    ||||||||||||||||||||| || ||||||  ||||| ||| ||| ||||| ||||| ||||||||||||||||| ||||||| | ||||||           
T  41145322 ttttgagcttatgaaaaatagtttatgcaaataaataagtttatatattaattcataagttctcactaatgaaaatcgtatcttta-aagttg-tttttt 41145419  T
Q  146 cataaattaccttgacaagcttatg---aataatacataaaagcttatttatttgaataag 203  Q
    |||||| |||||| |||| ||||||   ||||||| ||||||||||||||||||| |||||    
T  41145420 cataaactaccttaacaaacttatgaataataataaataaaagcttatttatttgcataag 41145480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 203
Target Start/End: Complemental strand, 19925715 - 19925561
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 147  Q
    |||||||||||||||||||||| || |||  ||||| | |||||||||||   |||  ||||||||| ||||||||||||||||||| |||       |     
T  19925715 ttgagcttatgaaaaatagcttatgtaaataaataagtatttattttaatttgtaagctctcactaacgaaaattgtatcttcataaattg-ttttttcg 19925617  T
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||| |||||| |||| ||||| |||||||  |||||||||||||||||| |||||    
T  19925616 taaaataccttaacaaacttataaataataattaaaagcttatttatttgcataag 19925561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 29218177 - 29218265
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||| |||||||||||||||| || |||   |||| |||||||||||||  ||||| ||||||||||||||||| |||||||||||    
T  29218177 ttttgaggttatgaaaaatagcttatgtaaatacataagtttttattttaatttataaactctcactaatgaaaattatatcttcataa 29218265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Original strand, 35168466 - 35168512
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttattt 192  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  35168466 cataaactaccttgacaagcttatgaataatacataaaagcttattt 35168512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 37410839 - 37410925
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 132  Q
    |||||||||||||||||||||||| || |||  ||||| ||| |||||||||  |||| |||| ||||| |||||||||||||||||    
T  37410839 ttttgagcttatgaaaaatagcttatgtaaataaataagtttatattttaatttataagttcttactaacgaaaattgtatcttcat 37410925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 48 - 203
Target Start/End: Complemental strand, 2669806 - 2669652
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 147  Q
    |||||||||||||||| ||||| || |||  |||||  |||||| ||||| |||||  ||  ||||||||||| ||||| |||||||||||       ||    
T  2669806 ttgagcttatgaaaaagagcttatgaaaataaataagcttttatgttaattcataagatcctactaatgaaaaatgtatattcataagttg-ttttttca 2669708  T
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||| |||||| |||| ||||| |||||||||| | |||||||||||||| |||||    
T  2669707 taaactaccttaacaaacttataaataatacattagagcttatttatttgcataag 2669652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 202
Target Start/End: Complemental strand, 13265534 - 13265489
Alignment:
Q  157 ttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  13265534 ttgacaagcttatgaataatacataaaagcttatttatttgcataa 13265489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 35453471 - 35453414
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| |||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  35453471 cataaactaccttgataaacttatgaataatacataaaagcttatttatttgcataag 35453414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 35055581 - 35055494
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || |||  |||||  |||||||| ||| |||||  ||||||||| |||||||||||||||||||    
T  35055581 ttttgagcttatgaaaaatagcttatgtaaataaataagcttttattt-aattcataagctctcactaacgaaaattgtatcttcataa 35055494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 38895819 - 38895663
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    ||||||||||||||||| ||| || | ||||  ||||| ||||||| |||||  |||| || |||||||  || ||||||||||||||| ||            
T  38895819 ttttgagcttatgaaaattagtttatacaaataaataagtttttatattaatttataagttttcactaacaaatattgtatcttcataaatt-atttttt 38895721  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| |||||| |||||||||||||||||| ||||||| |||||| |||| |||||    
T  38895720 cataaactaccttaacaagcttatgaataataaataaaagtttatttttttgcataag 38895663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 9788969 - 9788879
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagtt 137  Q
    |||||||||||||||||||||||| || |||  |||| |||||||  ||||| ||||| ||||||||||  |||| ||||||||||||||||    
T  9788969 ttttgagcttatgaaaaatagcttatgaaaataaatatatttttaaattaattcataagttctcactaa-caaaaatgtatcttcataagtt 9788879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 25333635 - 25333718
Alignment:
Q  54 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagtt 137  Q
    |||||||||||||||| || |||  |||||  |||||| ||||| ||||| || ||||||| ||||||||||||||||||||||    
T  25333635 ttatgaaaaatagcttatgtaaataaataagcttttatgttaattcataagttttcactaacgaaaattgtatcttcataagtt 25333718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 38338778 - 38338865
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||| |||||||||||||||| || |||  ||||| |||||||||||||  |||| |||||||||| ||||||  |||||||||||    
T  38338778 tttgagattatgaaaaatagcttatgtaaataaataagtttttattttaatttataagttctcactaacgaaaatcatatcttcataa 38338865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 14942580 - 14942437
Alignment:
Q  50 gagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncata 149  Q
    ||||||||| |||||||||||||||||  |||||  |||||| |||||  |||| ||||  ||||  ||||||| |||||||||||| |       ||||    
T  14942580 gagcttatggaaaatagcttttgcaaataaataaggttttatgttaatttataagttcttgctaacaaaaattgcatcttcataagtcg-ttttttcata 14942482  T
Q  150 aattaccttgacaagcttatgaataatacataaaagcttatttat 194  Q
    || || ||| |||||||||| ||||||||| ||||||||||||||    
T  14942481 aactaacttaacaagcttataaataatacacaaaagcttatttat 14942437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 42102266 - 42102180
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 132  Q
    |||||||||||||||||||||||| || |||  |||||  ||||||||||||  ||||  ||||| ||| |||||||||||||||||    
T  42102266 ttttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttataacctctcattaacgaaaattgtatcttcat 42102180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 24866877 - 24866966
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataag 135  Q
    |||||||||||||||||| ||||| ||||||  ||||| ||||||| |||||  |||| |||||  ||| |||||||||| |||||||||    
T  24866877 ttttgagcttatgaaaaagagcttatgcaaataaataagtttttatcttaatttataagttctcgataacgaaaattgtaccttcataag 24866966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 1089074 - 1089018
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||||| ||| |||||||||||||||||||||||| ||| |||||||||||| ||||    
T  1089074 cataaagtacattgacaagcttatgaataatacattaaaacttatttatttgcataa 1089018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 11988356 - 11988268
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||| ||| || |||  ||||   ||||||||||||  ||||  ||||||||| |||||||||||||||||||    
T  11988356 ttttgagcttatgaaaaataacttatgtaaataaatatgcttttattttaatttataagctctcactaacgaaaattgtatcttcataa 11988268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 12607239 - 12607151
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||| ||||||||||||||||||| || |||  |||||  ||||||||||||  ||||  ||||||||| | |||||||||||||||||    
T  12607239 ttttaagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttataagctctcactaacggaaattgtatcttcataa 12607151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 13131479 - 13131435
Alignment:
Q  158 tgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||||| ||||||||||||||||||||||||||||||||| ||||    
T  13131479 tgacaaacttatgaataatacataaaagcttatttatttgcataa 13131435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 15763263 - 15763207
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaattt 87  Q
    ||||| ||| |||||||||||| |||||||||||||||| |||||| ||||||||||    
T  15763263 tttggattgacttatttttgagtttatgaaaaatagcttatgcaaattaataaattt 15763207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 138
Target Start/End: Original strand, 25465781 - 25465865
Alignment:
Q  54 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    |||||||||||||||| ||||||  |||||  |||||| ||||| ||||| || ||| |||  ||||||||||||||||||||||    
T  25465781 ttatgaaaaatagcttatgcaaataaataagcttttatgttaattcataagttttcagtaacaaaaattgtatcttcataagttg 25465865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 28280869 - 28280801
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaa 114  Q
    |||||||||||||||||| ||||| ||||||  ||||| ||||||| ||||| ||||| ||||||||||    
T  28280869 ttttgagcttatgaaaaagagcttatgcaaataaataagtttttatcttaattcataagttctcactaa 28280801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 10480029 - 10480067
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagctt 69  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  10480029 tttggattggcttatttttgagcttatgaaaaatagctt 10480067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 32131400 - 32131453
Alignment:
Q  23 aggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 76  Q
    ||||||||||||| ||| |||||||||||||||||| |||| ||||| ||||||    
T  32131400 aggacccatttggattgacttatttttgagcttatgcaaaacagcttatgcaaa 32131453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 35285989 - 35285932
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||| ||||| ||||||||||||| ||| ||||||||||||||||| |||||    
T  35285989 cataaactactttgacgagcttatgaataacacacaaaagcttatttatttgcataag 35285932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 14262486 - 14262394
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    |||||||||||| ||||| | ||| ||||||  ||||| ||||||| ||||| |||||  ||| |||||  |||||||||| |||||||||||    
T  14262486 ttttgagcttataaaaaagaacttatgcaaaaaaataagtttttatgttaattcataagatcttactaacaaaaattgtatattcataagttg 14262394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 19327914 - 19327871
Alignment:
Q  160 acaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||    
T  19327914 acaaacttatgaataatacataaaagtttatttatttgcataag 19327871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 138
Target Start/End: Complemental strand, 9782340 - 9782251
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    |||||||||||||||| ||||  ||||||  | ||| ||||||| ||||| |||||  ||| ||||| ||||||||||| |||||||||||    
T  9782340 ttgagcttatgaaaaagagctgatgcaaaa-attaactttttatgttaattcataagatcttactaacgaaaattgtatattcataagttg 9782251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 11460823 - 11460785
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagctt 69  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  11460823 tttggattgacttatttttgagcttatgaaaaatagctt 11460785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 29243107 - 29243145
Alignment:
Q  165 cttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  29243107 cttataaataatacataaaagcttatttatttgcataag 29243145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 32924139 - 32924230
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaat----ttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    ||||||||||||| |||||||| ||||||  |||||||    |||||| ||||| ||||| || ||||||| ||||||| |||||||||||||||    
T  32924139 ttgagcttatgaagaatagcttatgcaaa--aataaataagcttttatattaattcataagttttcactaa-gaaaattttatcttcataagttg 32924230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 9130962 - 9131035
Alignment:
Q  65 agcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    ||||| ||||||  |||||| |||||| ||||| ||||| |||  ||||| |||||||||||||||||| ||||    
T  9130962 agcttatgcaaataaataaacttttatgttaattcataagttccgactaacgaaaattgtatcttcataggttg 9131035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 68
Target Start/End: Complemental strand, 11460878 - 11460841
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagct 68  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  11460878 tttggattgacttatttttgagcttatgaaaaatagct 11460841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 24087346 - 24087249
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatct 128  Q
    ||||| ||| ||||||||||||   |||||||||||||| ||||||  |||||  ||||||||||||  |||| || ||| ||| |||||| ||||||    
T  24087346 tttggattgacttatttttgagtgaatgaaaaatagcttatgcaaataaataagcttttattttaatttataagttttcattaacgaaaatggtatct 24087249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 197
Target Start/End: Original strand, 34102733 - 34102762
Alignment:
Q  168 atgaataatacataaaagcttatttatttg 197  Q
    ||||||||||||||||||||||||||||||    
T  34102733 atgaataatacataaaagcttatttatttg 34102762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 14709561 - 14709617
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||||| || ||||||||||||||||||  ||| |||||||||||||| ||| ||||    
T  14709561 cataaactagcttgacaagcttatgaattgtacttaaaagcttatttagttgcataa 14709617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 29390462 - 29390632
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| |||||||||||||||||||||||||| || ||||||  |||||  |||||| ||||| ||||||||||  |||| |||||||||||||||    
T  29390462 tttggattgacttatttttgagcttatgaaaaatagtttatgcaaataaataagcttttatgttaattcataaattctagctaacgaaaattgtatcttc 29390561  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||       |||||| |||||| ||||||||||||||||||||| |||| ||||||||||| |||||    
T  29390562 ataagttg--tttttcataaactacctttacaagcttatgaataatacatcaaagattatttatttgcataag 29390632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 29378829 - 29378649
Alignment:
Q  22 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaat 121  Q
    |||| ||| ||||| ||| |||||||||||| |||||||||||||||| ||||||  |||||  |||||  ||||| ||||| |||| ||||| ||||||    
T  29378829 aagggcccgtttggattgacttatttttgagtttatgaaaaatagcttatgcaaataaataagcttttacgttaattcataagttcttactaacgaaaat 29378730  T
Q  122 tgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||||||| ||       |||||| ||||||||||| || || ||||||||||||||||||||||||||| |||||    
T  29378729 tgtatcttcataagctg-ttttttcataaactaccttgacaaactcataaataatacataaaagcttatttatttgcataag 29378649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 37 - 203
Target Start/End: Complemental strand, 34923102 - 34922935
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 136  Q
    ||||||||||||||||||||| ||||||||||| ||||||  |||||  |||||| ||| | ||||| |||||||||| ||||| |||||||||| |||     
T  34923102 ttggcttatttttgagcttataaaaaatagcttatgcaaataaataagcttttatgttagttcataagttctcactaacgaaaagtgtatcttcacaagc 34923003  T
Q  137 tg-nnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||         ||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  34923002 tgtttttttttataaactaccttgacaaacttatgaataatacataaaagcttatttatttgcataag 34922935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 48 - 203
Target Start/End: Original strand, 44613401 - 44613555
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 147  Q
    |||||||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| |||| | |||| ||||||||||| ||||||||||       ||    
T  44613401 ttgagcttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagttctaattaataaaaattgtatcgtcataagttg-ttttttca 44613499  T
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  44613500 taaactaccttaacaagcttatgaataataaataaaagcttatttatttgcataag 44613555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 40 - 197
Target Start/End: Original strand, 14691219 - 14691376
Alignment:
Q  40 gcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgn 139  Q
    |||||||||| |||||||||||||||| |  ||||||  |||||  |||||| ||||| ||||| |||||||||| ||||||| ||||||||||| |||     
T  14691219 gcttattttttagcttatgaaaaatagttcatgcaaataaataaccttttatgttaattcataagttctcactaacgaaaattatatcttcataaattg- 14691317  T
Q  140 nnnnnncataaattaccttgacaagcttatgaataatacataaaagc-ttatttatttg 197  Q
          |||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  14691318 ttttttcataaattacattgacaagcttatgaataatacataaaagctttatttatttg 14691376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 47511220 - 47511047
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctca--ctaatgaaaattgtatct 128  Q
    ||||| |||| ||||||||||| |||||||||||||||| ||||    ||||| ||||||| ||||| ||||| ||||||  | ||||||||||||||||    
T  47511220 tttggattggtttatttttgaggttatgaaaaatagcttatgcagttaaataattttttatgttaattcataagttctcaccccaatgaaaattgtatct 47511121  T
Q  129 tcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||| ||       |||| | | |||| |||||||||||||||||||||||||||||||||||||| |||||    
T  47511120 tcataagctg-ttttttcatagacttccttaacaagcttatgaataatacataaaagcttatttatttgcataag 47511047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 38372733 - 38372562
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| |||| |||||||||||||||||||||||||||  ||||||  ||| |  |||||| ||||| ||||| |||||||||| ||||||||| |||||    
T  38372733 tttggattgggttatttttgagcttatgaaaaatagctaatgcaaataaatcagcttttatgttaattcataagttctcactaacgaaaattgtttcttc 38372634  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
     | || ||       | |||| ||||||||||| |||||||||||||||||| |||||||||||||| |||||    
T  38372633 ttgagctg-ctttttcgtaaactaccttgacaaacttatgaataatacataagagcttatttatttgcataag 38372562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 202
Target Start/End: Complemental strand, 20888739 - 20888578
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnn 140  Q
    ||||||||||||||||||||||||| ||| ||||||  | ||| ||||||| |||||  |||| || ||||  | ||||||||||||||||||| |||      
T  20888739 cttatttttgagcttatgaaaaataacttatgcaaataagtaagtttttatgttaatttataagttttcacggaagaaaattgtatcttcataaattg-t 20888641  T
Q  141 nnnnncataaattaccttgacaagcttatgaataatacat-aaaagcttatttatttgaataa 202  Q
         |||||| ||||||  |||||||||||||||||||| ||||||||||||||||| ||||    
T  20888640 tttttcataaactacctttgcaagcttatgaataatacataaaaagcttatttatttgcataa 20888578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 197
Target Start/End: Complemental strand, 30181727 - 30181560
Alignment:
Q  28 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc 127  Q
    |||||||  ||| ||||||||| ||||||| || ||||| || ||||||  |||||  |||||| ||||| ||||| ||| ||||||||||||  |||||    
T  30181727 ccatttgtattgccttattttttagcttat-aataatagtttatgcaaataaataagcttttatgttaattcataagttcccactaatgaaaacagtatc 30181629  T
Q  128 ttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||||| ||        ||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  30181628 ttcataagctgttttttg-ataaactaccttgacaagcttatgaataatacataaaagcttctttatttg 30181560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 33287986 - 33288090
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| |||||||||||||||||||||||||| |||||| | ||||  ||||| ||||||| ||||| ||||| || ||||||| ||||| |||||||||    
T  33287986 tttggattggcttatttttgagcttatgaaaactagcttatccaaataaataagtttttatgttaattcataagttttcactaacgaaaactgtatcttc 33288085  T
Q  131 ataag 135  Q
    |||||    
T  33288086 ataag 33288090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 22032922 - 22032766
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    |||||||||||||||||| ||||| ||||||  ||||| ||||||| |||||  |||| |||||||||| |||||||||| |||||||| |||           
T  22032922 ttttgagcttatgaaaaaaagcttatgcaaataaataagtttttatcttaatttataagttctcactaacgaaaattgtaccttcataaattg-tttttt 22032824  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||| || ||| |||||| |||||||||||||| | |||||||||| |||||    
T  22032823 cataaactacattaacatgcttataaataatacataaaaacatatttatttgcataag 22032766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 1312273 - 1312185
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || |||  |||||| ||||||||||||  ||||| ||||||||||||||| ||||| |||||||    
T  1312273 ttttgagcttatgaaaaatagcttatgtaaataaataaacttttattttaatttataaactctcactaatgaaaagtgtatattcataa 1312185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 25908469 - 25908366
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| |||||||||||||||| ||||||||||| |||| ||||||  ||||| ||||||| |||||  |||| || |||| || |||||||||||||||    
T  25908469 tttggattggcttatttttgaggttatgaaaaatggcttatgcaaataaataagtttttatgttaatttataacttttcacaaacgaaaattgtatcttc 25908370  T
Q  131 ataa 134  Q
    ||||    
T  25908369 ataa 25908366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 79 - 202
Target Start/End: Original strand, 48021607 - 48021728
Alignment:
Q  79 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatac 178  Q
    ||||| ||||||| ||||| ||||| || ||||||||||||||||||||||||| ||||        |||||| ||| || ||||||||||||||||||     
T  48021607 aataattttttatattaattcataagttttcactaatgaaaattgtatcttcattagtt--atttttcataaactactttaacaagcttatgaataataa 48021704  T
Q  179 ataaaagcttatttatttgaataa 202  Q
    |||| |||||||||||||| ||||    
T  48021705 ataagagcttatttatttgcataa 48021728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 41037813 - 41037757
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  41037813 cataaattaccttgacaagctt-tgaataatacataaaagcttatttatttgcataag 41037757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 43818806 - 43818883
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgta 125  Q
    |||||||||||||||| ||||| ||||||  ||||| ||||||| ||||| ||||| |||||||||||||||||||||    
T  43818806 ttgagcttatgaaaaagagcttatgcaaataaataagtttttatcttaattcataagttctcactaatgaaaattgta 43818883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 991659 - 991571
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || |||  |||||  ||||||||||||  ||||| ||||||||| ||||| |||||||||||||    
T  991659 ttttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatttataaactctcactaacgaaaagtgtatcttcataa 991571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 40629344 - 40629446
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||| ||||||   ||||| ||||| ||||| ||||||| ||  ||||| ||||||||    
T  40629344 tttggattggcttatttttgagcttatgaaaaatagcttaggcaaa-taataagcatttatattaattcataagttctcacaaacaaaaatagtatcttc 40629442  T
Q  131 ataa 134  Q
    ||||    
T  40629443 ataa 40629446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 33205009 - 33204915
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgta 125  Q
    ||||| ||||||||||||| ||||||||||||||| ||| ||||||  |||||  |||||| ||||| ||||| |||||||||| || |||||||    
T  33205009 tttggattggcttattttttagcttatgaaaaatatcttatgcaaataaataagcttttatgttaattcataagttctcactaacgataattgta 33204915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 47654342 - 47654428
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||| | ||| ||||||  ||||| ||||||| ||||| ||||| |||||||||| |||||||||| ||||||||    
T  47654342 ttgagcttatgaaaaagatcttatgcaaataaataagtttttatcttaattcataagttctcactaacgaaaattgtaccttcataa 47654428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 104 - 202
Target Start/End: Complemental strand, 41094318 - 41094223
Alignment:
Q  104 attctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    ||||| ||||| ||||||||||||||||||||||        ||||||  |||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  41094318 attcttactaacgaaaattgtatcttcataagtt---tttttcataaaccaccttgacaagcttatgagtaatacataaaggcttatttatttgcataa 41094223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 204
Target Start/End: Complemental strand, 22575746 - 22575589
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    |||| ||||||||||||||||||| || | |  ||||| |||||||||||||  ||||  ||| ||||| |||||||||||||||||||  ||           
T  22575746 ttttaagcttatgaaaaatagcttatgtagataaataagtttttattttaatttataagctcttactaacgaaaattgtatcttcataaactg-tttttt 22575648  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataaga 204  Q
    |||||| || ||| |||| ||||| |||||||||||||| | |||||||||| ||||||    
T  22575647 cataaaatatcttaacaaacttataaataatacataaaaacgtatttatttgcataaga 22575589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 137
Target Start/End: Original strand, 18765022 - 18765129
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaa-tttttattttaatacataaattctcactaatgaaaattgtatctt 129  Q
    ||||| ||||||||||||| ||||||||||||||| |||  |||||  |||||| ||||||| |||||    || ||||||||||  |||||||||||||    
T  18765022 tttggattggcttattttttagcttatgaaaaataacttacgcaaataaataaactttttatattaatttgcaagttctcactaacaaaaattgtatctt 18765121  T
Q  130 cataagtt 137  Q
    ||||||||    
T  18765122 cataagtt 18765129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 23137094 - 23137177
Alignment:
Q  51 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||| || |||  | |||  ||||||||||||  ||||  |||||||||||||||||||||||||||||    
T  23137094 agcttatgaaaaatagcttatgtaaataagtaagcttttattttaatttataagctctcactaatgaaaattgtatcttcataa 23137177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 33288134 - 33288181
Alignment:
Q  156 cttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||    
T  33288134 cttgacaagctaatgaataatacataaaagcttatttatttgcataag 33288181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 49104295 - 49104378
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    |||||||||||  ||||||| || ||||||  ||||||||||||| ||||| |||||||||||||| || |||||  |||||||    
T  49104295 tttgagcttatataaaatagattatgcaaataaataaatttttatgttaattcataaattctcactcataaaaatcatatcttc 49104378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 5947747 - 5947669
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaat 115  Q
    |||||||||| ||||| |||| ||||||||||| ||||||  |||||| | ||||| |||| | |||||||||||||||    
T  5947747 ttggcttattgttgagtttataaaaaatagcttatgcaaataaataaactcttattataattcgtaaattctcactaat 5947669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 24371353 - 24371436
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||||||| || |    ||||| ||||||||||| |  ||||  ||||||||| |||||||||||||||||||    
T  24371353 tttgagcttatgaaaaatagcttatgta----aataagtttttattttattttataagctctcactaacgaaaattgtatcttcataa 24371436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 204
Target Start/End: Complemental strand, 35809248 - 35809093
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 147  Q
    |||||||||||||||| ||||| || |||  | |||  |||||| ||||| |||||| ||| |||   ||||||||||| ||| |||||||       ||    
T  35809248 ttgagcttatgaaaaagagcttatgtaaataattaagcttttatgttaattcataaaatcttactggcgaaaattgtatattcttaagttgtttttt-ca 35809150  T
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataaga 204  Q
    |||| ||| || |||||||||| |||||||||| || ||||||||||||| ||||||    
T  35809149 taaactacgttaacaagcttataaataatacattaatgcttatttatttgcataaga 35809093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 178
Target Start/End: Complemental strand, 39279605 - 39279458
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctc-actaatgaaaattgtatctt 129  Q
    ||||| |||||||  |||||||||||||||||||||||| | ||||  |||||  |||||| ||||| ||||  ||||| | ||| ||||||||||||||    
T  39279605 tttggattggcttgattttgagcttatgaaaaatagcttatacaaataaataagcttttatgttaattcataggttctcaattaacgaaaattgtatctt 39279506  T
Q  130 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatac 178  Q
    | |||| ||       ||||||  ||||| |||||||||||||||||||    
T  39279505 cctaagctg-atttttcataaaccaccttaacaagcttatgaataatac 39279458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 40629449 - 40629498
Alignment:
Q  153 taccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  40629449 taccttgacaagcttatgaataatacat-aaagtttatttatttggataag 40629498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 44799560 - 44799474
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||| || || |||  ||||| |||||||||||||  ||||  ||||||||| ||| ||| |||||||||||    
T  44799560 ttgagcttatgaaaaatagtttatgtaaataaataagtttttattttaatttataagctctcactaacgaatattctatcttcataa 44799474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 7098125 - 7098181
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||||| || |||||||| |||||||||||| ||||||| |||||||||||| ||||    
T  7098125 cataaactatcttgacaaacttatgaataattcataaaatcttatttatttgtataa 7098181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 7774673 - 7774761
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||| ||||||| |||||||| || || |||  |||||| ||||| ||||||  ||||| |||||| || |||||||||||||||||||    
T  7774673 ttttcagcttataaaaaatagtttatgtaaataaataaacttttaatttaatttataaactctcaccaacgaaaattgtatcttcataa 7774761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 16012853 - 16012773
Alignment:
Q  51 agcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttca 131  Q
    |||||||||||||||||||  |||||  || ||||| |||  ||||| ||||| || ||||||| ||||||||||||||||    
T  16012853 agcttatgaaaaatagcttaagcaaataaaaaaattgttaggttaattcataagttttcactaacgaaaattgtatcttca 16012773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 18837276 - 18837232
Alignment:
Q  153 taccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||| |||||||||||||||||||| | |||||||||||||||    
T  18837276 tacctttacaagcttatgaataatacacataagcttatttatttg 18837232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 25655730 - 25655674
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaat 97  Q
    ||||||||| | ||||||||||||| ||||||||||  ||||| |||||||||||||    
T  25655730 cttattttttaacttatgaaaaataacttttgcaaataaataagtttttattttaat 25655674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 32848696 - 32848612
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagt-aataaatttttattttaatacataaattctcactaatgaaaattgt 124  Q
    ||||||||| ||||||||||||||| ||| |||||| | |||||  |||||| |||||  ||||||| | |||||||||||||||    
T  32848696 cttattttttagcttatgaaaaataacttatgcaaaataaataaggttttatgttaatttataaattttaactaatgaaaattgt 32848612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 41677434 - 41677378
Alignment:
Q  147 ataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| ||| ||||||| ||||||||||||||||||||  ||||||||||| |||||    
T  41677434 ataaactacattgacaaacttatgaataatacataaaaatttatttatttgcataag 41677378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 16932857 - 16932944
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||||||| || | |  |||||  ||||||||||||  ||||  | | ||||| |||||||||||||||||||    
T  16932857 tttgagcttatgaaaaatagcttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatcttcataa 16932944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 16938240 - 16938327
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||||||| || | |  |||||  ||||||||||||  ||||  | | ||||| |||||||||||||||||||    
T  16938240 tttgagcttatgaaaaatagcttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatcttcataa 16938327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 16958974 - 16958887
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||||||| || | |  |||||  ||||||||||||  ||||  | | ||||| |||||||||||||||||||    
T  16958974 tttgagcttatgaaaaatagcttatgtatataaataagcttttattttaatttataagcttttactaacgaaaattgtatcttcataa 16958887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 35246828 - 35246741
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||||| | || |||  |||||  ||||||||||||  ||||   |||||||| |||||||||||| ||||||    
T  35246828 tttgagcttatgaaaaatagcctatgtaaataaataagcttttattttaatttataagccctcactaacgaaaattgtatcctcataa 35246741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 48895357 - 48895306
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||| |||||||| |||||||||||||||| || || |||||||||||||    
T  48895357 cataaactaccttgataagcttatgaataatatatgaatgcttatttatttg 48895306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 203
Target Start/End: Original strand, 1054116 - 1054150
Alignment:
Q  169 tgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||||||||||||||||||||||| |||||    
T  1054116 tgaataatacataaaagcttatttatttgcataag 1054150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 203
Target Start/End: Complemental strand, 21249198 - 21249160
Alignment:
Q  165 cttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||||||||||||| |||||||||||| |||||    
T  21249198 cttatgaataatacataaaaacttatttatttgcataag 21249160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 23356516 - 23356566
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||||||||||||||||| ||| ||||||||||| |||  |||||||||||    
T  23356516 cataaattaccttgacaaacttgtgaataatacaaaaagccttatttattt 23356566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 185
Target Start/End: Original strand, 37465816 - 37465951
Alignment:
Q  50 gagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncata 149  Q
    ||||||||||||| |||||| ||||||  |||||  |||||| ||||| ||||| ||||| | ||  || |||||||||| ||||||||        |||    
T  37465816 gagcttatgaaaattagcttatgcaaataaataagcttttatattaattcataagttctcgccaacaaatattgtatcttaataagttgttttttctata 37465915  T
Q  150 aattaccttgacaagcttatgaataatacataaaag 185  Q
    || || ||| ||||| |||||||||||| |||||||    
T  37465916 aactatcttaacaagtttatgaataataaataaaag 37465951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 203
Target Start/End: Complemental strand, 41094193 - 41094151
Alignment:
Q  161 caagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||    
T  41094193 caagcttatgaataatacatagaagtttatttatttgcataag 41094151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 42083442 - 42083492
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||||||||  || |||| |||||||||||||||||||| |||||||||||    
T  42083442 cataaattatatttacaaacttatgaataatacataaaaacttatttattt 42083492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 18704307 - 18704352
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 76  Q
    ||||||||||||| |||||| |||||||| ||||||||| ||||||    
T  18704307 tttgggttggcttgtttttgtgcttatgagaaatagcttatgcaaa 18704352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 19914105 - 19914017
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||| |||||||||||||||| || |||  |||||  ||||||||||||| ||||  | | ||||| ||||||| | |||||||||    
T  19914105 ttttgagtttatgaaaaatagcttatgtaaataaataagcttttattttaatatataagcttttactaacgaaaattatctcttcataa 19914017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 22515463 - 22515519
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaat 97  Q
    ||||||||| ||||||||||| ||||||| ||||||  ||||| ||||||| |||||    
T  22515463 cttatttttaagcttatgaaagatagcttatgcaaataaataattttttatgttaat 22515519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 24414574 - 24414534
Alignment:
Q  156 cttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    ||||||||||||||| |||||||||||| | ||||||||||    
T  24414574 cttgacaagcttatggataatacataaatgtttatttattt 24414534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 7e-34; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 37 - 203
Target Start/End: Original strand, 40580993 - 40581159
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 136  Q
    |||||||||||||||| | |||||||||| ||| ||||||  |||||  |||||| ||||| ||||| |||||||||| ||||||||| |||||||| |     
T  40580993 ttggcttatttttgagttgatgaaaaatatcttatgcaaataaataagattttatgttaattcataagttctcactaacgaaaattgtttcttcatacgc 40581092  T
Q  137 tgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||       |||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  40581093 tgtttttttcataaactaccttgacaagcttattaataatacataaaagcttatttatttgcataag 40581159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 46 - 203
Target Start/End: Original strand, 40240503 - 40240659
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    |||||||||||||||||||||||| ||||||  |||||  |||||| ||||| |||||  ||||||||| |||||||||||||||||||||||           
T  40240503 ttttgagcttatgaaaaatagcttatgcaaataaataagcttttatcttaattcataagctctcactaacgaaaattgtatcttcataagttg-tttttt 40240601  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||||| |||| ||||||||||||||||||||||||| |||||||| |||||    
T  40240602 cataaactacctagacacgcttatgaataatacataaaagcttctttatttgcataag 40240659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 195
Target Start/End: Original strand, 53217952 - 53218114
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||||||||||||| ||||||||||||||| | | |||| |  |||||  ||||||||||||  |||| |||||||||| |||||||||||||||    
T  53217952 tttggtttggcttatttttaagcttatgaaaaatatcctatgcagaa-aataagcttttattttaatttataagttctcactaacgaaaattgtatcttc 53218050  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatt 195  Q
    | ||||||       |||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  53218051 aaaagttgtttttt-cataaactaccttgacaagcttatgaataatacataaaatcttatttatt 53218114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 43079845 - 43080016
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| |||||||  |||||||||||||||||||| | ||||  |||||  |||||  ||||| ||||| |||||| | | |||||||||||||||    
T  43079845 tttggattgacttatttacgagcttatgaaaaatagcttattcaaataaataagcttttaagttaattcataagttctcaatcacgaaaattgtatcttc 43079944  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| ||       |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  43079945 ataagctgtttttt-cataaactaccttgacaagcttatgaataacacataaaagcttatttatttgcataag 43080016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 22809104 - 22809276
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| |||| |||||||||||||||||||| | ||||| ||||||  ||||| ||||||| ||||| ||||| ||||   ||| |||||||||||||||    
T  22809104 tttggcttggtttatttttgagcttatgaaataaagcttgtgcaaataaataagtttttatgttaattcataagttcttcttaacgaaaattgtatcttc 22809203  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacat-aaaagcttatttatttgaataag 203  Q
    |||||  |       |||||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  22809204 ataagcag-ttttttcataaactaccttgacaagcttatgaataatatataaaaagcttatttatttgcataag 22809276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 31 - 202
Target Start/End: Complemental strand, 585194 - 585025
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    |||||||||||||||||||||||||||||||||||| || | ||||  |||||  || ||| ||||| | ||| |||  ||||| |||||||||||||||    
T  585194 tttgggttggcttatttttgagcttatgaaaaatag-ttattcaaatcaataagcttatatgttaattcttaagttcaaactaacgaaaattgtatcttc 585096  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    ||||||||       |||||| |||||  | |||||| |||||||| |||||||||||||||||||| ||||    
T  585095 ataagttg-ttttttcataaactacctcaagaagcttttgaataatgcataaaagcttatttatttgcataa 585025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 197
Target Start/End: Original strand, 48597774 - 48597943
Alignment:
Q  28 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaataca-taaattctcactaatgaaaattgtat 126  Q
    |||||||| |||||||||||||||||||| |||||||||  ||||||||  |||||  |||||| ||||| || ||| |||||||| | |||||||||||    
T  48597774 ccatttggattggcttatttttgagcttacgaaaaatagtgtttgcaaataaataagcttttatgttaattcattaagttctcactgacgaaaattgtat 48597873  T
Q  127 cttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    ||||||||||||       |||| | ||||| ||||| ||||||||||||  ||||||| |||| ||||||    
T  48597874 cttcataagttg-ttttttcatacactacctcgacaaacttatgaataatttataaaagtttatgtatttg 48597943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 20685960 - 20685853
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| ||||||||| |||||||||||||| |||| | ||||  ||||| |||||||  |||| || || ||||||||||||||||||||||||||    
T  20685960 tttggattgacttattttttagcttatgaaaaattgcttatccaaataaataagtttttatgataattcacaagttctcactaatgaaaattgtatcttc 20685861  T
Q  131 ataagttg 138  Q
    ||||||||    
T  20685860 ataagttg 20685853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 100 - 203
Target Start/End: Complemental strand, 52021353 - 52021250
Alignment:
Q  100 ataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaa 199  Q
    |||| |||||||||| ||||||| |||||||||||| ||       |||||| ||||||||||| |||||||||||||||||||||| |||||||||| |    
T  52021353 ataagttctcactaacgaaaattatatcttcataagctgtttttttcataaactaccttgacaatcttatgaataatacataaaagcatatttatttgca 52021254  T
Q  200 taag 203  Q
    ||||    
T  52021253 taag 52021250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 196
Target Start/End: Original strand, 32901076 - 32901223
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 147  Q
    |||||||||||||||||||||| ||||||  ||||  ||||||| |||| | |||| |||||||||| ||||||| |||||||||||||||        |    
T  32901076 ttgagcttatgaaaaatagcttatgcaaataaatatgtttttatattaaaatataagttctcactaacgaaaattttatcttcataagttgttttctt-a 32901174  T
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||| || ||| ||||  || ||||||||| ||||||||||||||||||    
T  32901175 taaactatcttaacaaatttgtgaataataaataaaagcttatttattt 32901223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 52421166 - 52421217
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  52421166 cataaactaccttgacaagcttatgaataatacataaaagcttatttatttg 52421217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 52 - 196
Target Start/End: Original strand, 34707645 - 34707788
Alignment:
Q  52 gcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaa 151  Q
    |||||||||||||| |||  |||||  ||||| ||||||| ||||| | ||| ||||| |||| ||||||||||||||| | || ||       ||||||    
T  34707645 gcttatgaaaaataacttaagcaaataaataagtttttatgttaattcgtaagttctcgctaacgaaaattgtatcttcgttagctgtttttt-cataaa 34707743  T
Q  152 ttaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
     |||||| ||||||||||||||||||||||||||||||| |||||    
T  34707744 ctaccttaacaagcttatgaataatacataaaagcttatatattt 34707788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 31 - 197
Target Start/End: Complemental strand, 3846030 - 3845865
Alignment:
Q  31 tttgggttggcttatttttgagctta-tgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 129  Q
    ||||| ||| |||||||||||||||| ||| ||||||||| ||||||  |||||  |||||| ||||| ||||  || ||||||  |||||| |||||||    
T  3846030 tttggattgccttatttttgagcttaatgagaaatagcttatgcaaataaataagcttttatgttaattcatatgttttcactagcgaaaat-gtatctt 3845932  T
Q  130 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||| | ||       |||||| || |||||||||||||||||||||| |||||||||||||||||||    
T  3845931 catatgctgttttgt-cataaactagcttgacaagcttatgaataatatataaaagcttatttatttg 3845865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 17752057 - 17752145
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || |||  |||||| |||||| |||||  |||| |||| ||||| |||||||||||||||||||    
T  17752057 ttttgagcttatgaaaaatagcttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtatcttcataa 17752145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 19053377 - 19053465
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || |||  |||||| |||||| |||||  |||| |||| ||||| |||||||||||||||||||    
T  19053377 ttttgagcttatgaaaaatagcttatgtaaataaataaacttttatgttaatttataagttcttactaacgaaaattgtatcttcataa 19053465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 29270462 - 29270373
Alignment:
Q  105 ttctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatt 195  Q
    |||||| ||| |||||||||||||||||||| ||       ||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  29270462 ttctcattaacgaaaattgtatcttcataagctgtttttt-cataaattatcttgaaaagcttatgaataatacataaaagcttatttatt 29270373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 29614353 - 29614265
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||||||| || |||  ||||| ||| |||||||||  ||||  ||||||||| |||||||||||||||||||    
T  29614353 ttttgagcttatgaaaaatagcttatgtaaataaataagtttatattttaatttataagctctcactaacgaaaattgtatcttcataa 29614265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 138
Target Start/End: Original strand, 52895327 - 52895423
Alignment:
Q  42 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    ||||||||||||||||||||||| | ||  |||||  |||||  |||||| ||||| |||||||||||||||| |||||||||| ||||| ||||||    
T  52895327 ttatttttgagcttatgaaaaattgtttaggcaaataaataagcttttatgttaattcataaattctcactaacgaaaattgtaacttcagaagttg 52895423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 203
Target Start/End: Original strand, 3870192 - 3870308
Alignment:
Q  86 ttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaag 185  Q
    |||||| ||||| ||||| |||||| ||||||||| |||||| ||||| ||||       |||||| |||||||||||||||||||| || |||||||||    
T  3870192 ttttatgttaattcataagttctcattaatgaaaagtgtatcatcatatgttgtttttt-cataaactaccttgacaagcttatgaacaaaacataaaag 3870290  T
Q  186 cttatttatttgaataag 203  Q
    ||||||| |||| |||||    
T  3870291 cttatttttttgcataag 3870308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 203
Target Start/End: Original strand, 1516057 - 1516179
Alignment:
Q  79 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatac 178  Q
    ||||| |||||||||||||  |||| ||||||||||||||||||||||||| ||||  ||       |||||| |||||| |||| ||||| ||||||||    
T  1516057 aataagtttttattttaatttataagttctcactaatgaaaattgtatctttataaactg-attttccataaaataccttaacaaacttataaataatac 1516155  T
Q  179 ataaaagcttatttatttgaataag 203  Q
    ||||| | |||||||||||||||||    
T  1516156 ataaatg-ttatttatttgaataag 1516179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 3645462 - 3645376
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 132  Q
    |||||||||||||||||||||||| || |||  ||||| ||| |||||||||  ||||  ||||||||| |||||||||||||||||    
T  3645462 ttttgagcttatgaaaaatagcttatgtaaataaataagtttatattttaatttataagctctcactaacgaaaattgtatcttcat 3645376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 21721067 - 21720981
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 132  Q
    ||||||| |||||||||||||||| ||||||  | ||| ||||||| ||||  ||||| |||||||||| |||||||||||||||||    
T  21721067 ttttgagtttatgaaaaatagcttatgcaaaaaagtaattttttatgttaagtcataagttctcactaacgaaaattgtatcttcat 21720981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 42956138 - 42956255
Alignment:
Q  79 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatac 178  Q
    ||||| ||||||| |||||  |||| |||||||||| |||||||||||||| ||||| ||       |||||| ||| | |||||| |||||||||||||    
T  42956138 aataagtttttatgttaatttataagttctcactaacgaaaattgtatctttataagctgttttat-cataaactacttcgacaagtttatgaataatac 42956236  T
Q  179 ataaaagcttatttatttg 197  Q
    |||||| ||||||||||||    
T  42956237 ataaaaacttatttatttg 42956255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 196
Target Start/End: Original strand, 43971773 - 43971922
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    |||||||||||||||||||| ||| ||||||  ||||  ||||||  |||| | |||| |||||||||| ||||||| ||||||||||| |||           
T  43971773 ttttgagcttatgaaaaataacttatgcaaataaatatgtttttaaattaaaatataagttctcactaacgaaaattttatcttcataaattg-ttttct 43971871  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||||| ||  || |||| ||| ||||||||| ||||||||||||||||||    
T  43971872 cataaactattttaacaaacttgtgaataataaataaaagcttatttattt 43971922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 10521215 - 10521164
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  10521215 cataaactacattgacaagcttatgaataatacatataagcttatttatttg 10521164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 10667459 - 10667408
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  10667459 cataaactacattgacaagcttatgaataatacatataagcttatttatttg 10667408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 51409552 - 51409397
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    ||||||| ||||||||| |||||| | ||||  ||||| |||| || ||||| ||||| || ||| || || ||||| |||||||||||||||           
T  51409552 ttttgagattatgaaaagtagcttatacaaataaataagtttt-atattaattcataatttttcagtattggaaattttatcttcataagttgtttttt- 51409455  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||||||||||| || |||||||||| ||||||| ||||||||||| |||||    
T  51409454 cataaactaccttgacaaactcatgaataataaataaaagattatttatttgcataag 51409397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 29830564 - 29830653
Alignment:
Q  47 tttgagcttatgaaaaa--tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||  || ||| || |||  ||||| |||||||||||||  |||| |||||||||| |||||||||||||||||||    
T  29830564 tttgagcttatgaaaaaaataacttgtgtaaataaataagtttttattttaatttataagttctcactaacgaaaattgtatcttcataa 29830653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 48 - 138
Target Start/End: Original strand, 33946478 - 33946568
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    |||||||||||||||||||||| ||||||  ||| |  |||||| ||||| ||||| |||||| ||| ||||||| ||||| |||||||||    
T  33946478 ttgagcttatgaaaaatagcttatgcaaataaatgagcttttatattaattcataagttctcattaacgaaaattttatctacataagttg 33946568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 196
Target Start/End: Original strand, 3876189 - 3876338
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    |||||||||||||||||||||||| ||||||  ||||| ||||||| ||||| ||||| ||   |||||  |||| | || |||| |||||||           
T  3876189 ttttgagcttatgaaaaatagcttatgcaaataaataagtttttatattaattcataagttagaactaacaaaaactttaccttcttaagttg-tttttt 3876287  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||||| |||||| || || |||||||||||| ||||||||| ||||||||    
T  3876288 cataaactaccttaactagattatgaataataaataaaagctaatttattt 3876338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 5129840 - 5129896
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||||| ||| |||||||||||||||||||||||| ||| |||||||||||| ||||    
T  5129840 cataaagtacattgacaagcttatgaataatacattaaaacttatttatttgcataa 5129896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 97
Target Start/End: Original strand, 32983212 - 32983268
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaat 97  Q
    ||||||||||||||||| ||||||||||| ||||||  ||||||||||||| |||||    
T  32983212 cttatttttgagcttataaaaaatagcttatgcaaataaataaatttttatgttaat 32983268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 37243626 - 37243538
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||| ||||| ||||||  | |||  |||||| ||||| ||||| ||||||| |||||||| |||| ||||||||    
T  37243626 ttttgagcttatgaaaaagagcttatgcaaataagtaagcttttatcttaattcataagttctcaccaatgaaaagtgtaccttcataa 37243538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 128
Target Start/End: Original strand, 53261676 - 53261776
Alignment:
Q  29 catttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttatt-ttaatacataaattctcactaatgaaaattgtatc 127  Q
    ||||||| ||| |||| |||||||||||||||||||||||| |||||   |||||  ||||||| ||||| ||||| |||||||| | |||| |||||||    
T  53261676 catttggattgacttagttttgagcttatgaaaaatagcttatgcaattaaataagcttttattgttaattcataagttctcactgacgaaagttgtatc 53261775  T
Q  128 t 128  Q
    |    
T  53261776 t 53261776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 20894662 - 20894576
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 132  Q
    |||||||||||| |||||||| || || |||  ||||| ||| |||||||||  ||||  ||||||||| |||||||||||||||||    
T  20894662 ttttgagcttataaaaaatagtttatgtaaataaataagtttatattttaatttataagctctcactaacgaaaattgtatcttcat 20894576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 46573365 - 46573443
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctc 109  Q
    ||||| || |||||||||| |||||| |||||||||||| ||||||  |||||  |||||| ||||| |||||||||||    
T  46573365 tttggattcgcttattttttagcttaggaaaaatagcttatgcaaataaataagcttttatgttaattcataaattctc 46573443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 47403696 - 47403839
Alignment:
Q  54 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaatt 153  Q
    ||||| |||||| ||| ||||||  ||||||||||||| |||||  ||||   ||||| || ||||||||||||||||||| ||        |||||| |    
T  47403696 ttatggaaaataacttatgcaaataaataaatttttatgttaatttataagccctcacaaacgaaaattgtatcttcataaattattttttgcataaact 47403795  T
Q  154 accttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    || || ||||  ||||||||||||| ||||| ||||||||||||    
T  47403796 acatttacaaatttatgaataatacctaaaaacttatttatttg 47403839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 24842104 - 24842189
Alignment:
Q  117 aaaattgtatcttcataagttgnnnnnnncataaattacctt-gacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||||||||||||||||       |||||||||| || ||||| ||||||||||||||||||||  ||||||||||| |||||    
T  24842104 aaaattgtatcttcataagttgttttt--cataaattacatttgacaaacttatgaataatacataaaaatttatttatttgcataag 24842189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 130
Target Start/End: Original strand, 30321647 - 30321739
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||||||||||| |||||| |||||||||||| ||||||  |||||   |||| ||||||  |||| || |||| ||||||||||||||||||    
T  30321647 ttggcttattttttagcttaagaaaaatagcttatgcaaataaataagccttta-tttaatttataagttttcaccaatgaaaattgtatcttc 30321739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 196
Target Start/End: Original strand, 45331236 - 45331370
Alignment:
Q  61 aaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttga 160  Q
    ||||||||| ||||||  |||||| |||||| ||||| ||||  ||||  |||  |||||||||||||||||||| ||       |||||| |  ||| |    
T  45331236 aaatagcttatgcaaataaataaacttttatgttaattcatatgttcttgctagcgaaaattgtatcttcataagatgtttttt-cataaactgtcttaa 45331334  T
Q  161 caagcttatgaataatacataaaagcttatttattt 196  Q
    |||||||||| |||||||||||||| ||||||||||    
T  45331335 caagcttatgcataatacataaaaggttatttattt 45331370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 20174866 - 20174958
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    ||||||| |||||||||| ||||| ||||||  |||||  ||||||  |||| |||||  ||| ||||| ||||||||||| |||||||||||    
T  20174866 ttttgaggttatgaaaaagagcttatgcaaataaataagcttttatgctaattcataagatcttactaacgaaaattgtatattcataagttg 20174958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 203
Target Start/End: Original strand, 4257225 - 4257383
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatt--tttattttaatacataaattctcactaatgaaaattgtatcttcataagttg-nnnnn 143  Q
    ||||||||||||||||||||||| || |||  ||||| ||  ||| |||||||  ||||  ||||||||  |||||||||||||||||||  ||          
T  4257225 tttgagcttatgaaaaatagcttatgtaaataaataagtttgttttttttaatttataagctctcactagcgaaaattgtatcttcataaactgtttttt 4257324  T
Q  144 nncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
      |||||| |||||| | || ||||| |||||||||||||| |||||||||||| |||||    
T  4257325 ttcataaactacctt-aaaaacttataaataatacataaaaacttatttatttgcataag 4257383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 197
Target Start/End: Complemental strand, 10272167 - 10272132
Alignment:
Q  162 aagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||||||||||||||||||||| |||||||||||    
T  10272167 aagcttatgaataatacataaaagtttatttatttg 10272132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 42 - 109
Target Start/End: Complemental strand, 31787686 - 31787619
Alignment:
Q  42 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctc 109  Q
    ||||||||||||||||||||||||| || ||||||  ||||||  ||||| ||||| ||||| |||||    
T  31787686 ttatttttgagcttatgaaaaatagtttatgcaaataaataaacgtttatattaattcataagttctc 31787619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 37778292 - 37778205
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||| ||||||||||||  || || |||  |||||  ||||||||||||  |||| ||||||||||  ||||||||||||||||||    
T  37778292 tttgagtttatgaaaaataatttgtgtaaataaataagcttttattttaatttataagttctcactaacaaaaattgtatcttcataa 37778205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 7292730 - 7292684
Alignment:
Q  157 ttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||| |||||||||||||||||| ||||||| |||||| |||||    
T  7292730 ttgacaaacttatgaataatacataagagcttatgtatttgcataag 7292684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 25341428 - 25341342
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||| ||||| || |||  ||||| ||||||| ||||| || || || || |||| ||||||| |||||||||||    
T  25341428 ttgagcttatgaaaaagagcttatgtaaataaataagtttttatattaattcacaagttttccctaacgaaaattttatcttcataa 25341342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 29002773 - 29002726
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatt 195  Q
    |||||||||| ||||||||||||||||||||||  ||||| |||||||||    
T  29002773 cataaattactttgacaagcttatgaataatac--aaaagtttatttatt 29002726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 202
Target Start/End: Complemental strand, 36266303 - 36266249
Alignment:
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||| |||||| |||| ||||| ||||||||||||||| ||||||||||| ||||    
T  36266303 taaaataccttaacaaacttataaataatacataaaagtttatttatttgcataa 36266249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 38524246 - 38524160
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||| ||||| ||||||  |||||  |||||| ||||| |||||  ||| ||||| |||||||| || |||||||    
T  38524246 ttgagcttatgaaaaagagcttatgcaaataaataagcttttatgttaattcataagatcttactaacgaaaattgcatattcataa 38524160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 50540426 - 50540464
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagctt 69  Q
    ||||| ||| |||||||||||||||||||||||||||||    
T  50540426 tttggattgtcttatttttgagcttatgaaaaatagctt 50540464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 10448835 - 10448778
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||| || |||||||||| ||||||||||||| || |||||||||| |||||    
T  10448835 cataaactacattaacaagcttataaataatacataaaggcatatttatttgcataag 10448778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 53261869 - 53261820
Alignment:
Q  27 cccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 76  Q
    ||||||||| |||||||||||||||||||||| | || ||||| ||||||    
T  53261869 cccatttggattggcttatttttgagcttatggacaacagcttatgcaaa 53261820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 21296827 - 21296771
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||||| |||||||| || | ||||||||||| |||||| |||||||||||| ||||    
T  21296827 cataaactaccttgataaacgtatgaataatagataaaaacttatttatttgcataa 21296771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 202
Target Start/End: Complemental strand, 23555521 - 23555489
Alignment:
Q  170 gaataatacataaaagcttatttatttgaataa 202  Q
    |||||||||||||||||||||||||||| ||||    
T  23555521 gaataatacataaaagcttatttatttgcataa 23555489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 29830716 - 29830772
Alignment:
Q  78 taataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||| |||||||||||||  |||| |||||| |||  ||||||||||||||||||    
T  29830716 taataagtttttattttaatttataagttctcagtaacaaaaattgtatcttcataa 29830772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 3e-33; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 37 - 203
Target Start/End: Complemental strand, 28625648 - 28625484
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 136  Q
    ||||||||||||| ||||||||||||||| ||| ||||||  |||||  |||||| ||||| ||||  |||||||||| ||||||||||||||||||||     
T  28625648 ttggcttattttt-agcttatgaaaaataacttatgcaaataaataagcttttatgttaattcataggttctcactaacgaaaattgtatcttcataagc 28625550  T
Q  137 tgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||       |||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  28625549 tg-ttttttcataaactaccttgacaagcttatgaataatacttaaaagcttatttatttgcataag 28625484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 31 - 202
Target Start/End: Complemental strand, 12467443 - 12467269
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaata---cataaattctcactaatgaaaattgtatc 127  Q
    ||||| ||||||||||||| || |||||||||||| ||| ||||||  |||||  |||||| ||| ||   ||||| ||||||||||  |||||||| ||    
T  12467443 tttggattggcttattttttaggttatgaaaaataacttatgcaaataaataagcttttatgttagtaattcataagttctcactaacaaaaattgtctc 12467344  T
Q  128 ttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||||||| ||       |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12467343 ttcataagctgtttttttcataaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataa 12467269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 37 - 202
Target Start/End: Original strand, 29922106 - 29922270
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 136  Q
    |||||||||||||||| |||||||||||||||| ||||||  |||||  |||||| ||||| |||||  |||||||||  |||||||||| | ||||||     
T  29922106 ttggcttatttttgagtttatgaaaaatagcttatgcaaataaataagcttttatattaattcataagctctcactaaaaaaaattgtatatgcataagc 29922205  T
Q  137 tgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    ||       |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  29922206 tgtgtttt-cataaactaccttgacaagcttatgaataatacataaaaacttatttatttgcataa 29922270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 195
Target Start/End: Complemental strand, 1869016 - 1868858
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||||      || |||||| |||||  |||  |||||||||| |||||||||||||||    
T  1869016 tttggattggcttattttcgagcttatgaaaaatagcttatgcaaat-----aacttttatgttaattgatacgttctcactaacgaaaattgtatcttc 1868922  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatt 195  Q
    ||||||||       |||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  1868921 ataagttgattttt-cataaactaccttgacaagcttgtgaataatacataaaagcttatttatt 1868858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 39 - 203
Target Start/End: Original strand, 41059708 - 41059871
Alignment:
Q  39 ggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    ||||||||||||||||||||||||| || || ||||||  |||||  |||||| ||||| ||||| |||||||||| |||||||| ||||||||||| ||    
T  41059708 ggcttatttttgagcttatgaaaaacagtttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattgaatcttcataaggtg 41059807  T
Q  139 nnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
           ||||||  ||||||| ||||||||||||||||||||||||||||||| |||| |||||    
T  41059808 -atttttcataaacaaccttgataagcttatgaataatacataaaagcttatttgtttgcataag 41059871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 191
Target Start/End: Original strand, 40452379 - 40452548
Alignment:
Q  22 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatg-aaaa 120  Q
    |||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||  |||||  | |||| || || ||||| |||||||||| | ||||    
T  40452379 aaggacctctttggattggcttatttttgagcttatgaaaaatagcttatgcaaataaataagctattatgtttattcataagttctcactaacgaaaaa 40452478  T
Q  121 ttgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatt 191  Q
    || |||||||||||| ||       |||||| |||||||||||||||||||||||| ||||||||||||||    
T  40452479 ttatatcttcataagctg-tttcttcataaactaccttgacaagcttatgaataatgcataaaagcttatt 40452548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 197
Target Start/End: Complemental strand, 1576806 - 1576641
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaa-tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 129  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||||  |||| | |||||| ||||| | ||| ||||||||||  |||||||||||||    
T  1576806 tttggattggcttatttttgagcttatgaaaaattagcttatgcaaataaatacagttttatgttaattcttaagttctcactaacaaaaattgtatctt 1576707  T
Q  130 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    || ||||||       |||||| ||| |||||||||||||||| |||||||||||| |||||||||||    
T  1576706 cacaagttg-tttttccataaactacattgacaagcttatgaa-aatacataaaagtttatttatttg 1576641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 197
Target Start/End: Original strand, 1608009 - 1608174
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaa-tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 129  Q
    ||||| ||||||||||||||||||||||||||| |||||| ||||||  |||| | |||||| ||||| | ||| ||||||||||  |||||||||||||    
T  1608009 tttggattggcttatttttgagcttatgaaaaattagcttatgcaaataaatacagttttatgttaattcttaagttctcactaacaaaaattgtatctt 1608108  T
Q  130 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    || ||||||       |||||| ||| |||||||||||||||| |||||||||||| |||||||||||    
T  1608109 cacaagttg-tttttccataaactacattgacaagcttatgaa-aatacataaaagtttatttatttg 1608174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 192
Target Start/End: Original strand, 31636997 - 31637165
Alignment:
Q  26 acccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaa----aat 121  Q
    |||||||||| ||||| |||||||||||||| |||||| ||||| |||||| ||| ||  |||||  ||||| ||||| ||||||| || |||    |||    
T  31636997 acccatttggattggcatatttttgagcttacgaaaaacagcttatgcaaa-taacaagcttttacgttaattcataagttctcacgaacgaacgaaaat 31637095  T
Q  122 tgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttattt 192  Q
    |||||||||||||| ||       |||||||||||||||||||||||||||||||||||||||||||||||    
T  31637096 tgtatcttcataagctgttcttt-cataaattaccttgacaagcttatgaataatacataaaagcttattt 31637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 42 - 203
Target Start/End: Complemental strand, 42852185 - 42852026
Alignment:
Q  42 ttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnn 141  Q
    |||||||| | |||||| |||| ||||| |||||   |||||  |||||| ||||| ||||| |||||||||| ||||||||||| || ||||||||       
T  42852185 ttattttttaacttatgcaaaacagcttatgcaactaaataagcttttatgttaattcataagttctcactaacgaaaattgtatttt-ataagttgttt 42852087  T
Q  142 nnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
        |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42852086 ttt-cataaactatcttgacaagcttatgaataatacataaaagcttatttatttgaataag 42852026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 203
Target Start/End: Complemental strand, 24030375 - 24030219
Alignment:
Q  45 tttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnn 144  Q
    ||||| ||||||| ||||||||||| ||||||  |||||  |||||| ||||| ||||| |||||||||| |||||||||||| ||  ||||            
T  24030375 ttttttagcttattaaaaatagcttatgcaaataaataagcttttatgttaattcataagttctcactaacgaaaattgtatcctcgcaagt--gttttt 24030278  T
Q  145 ncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
     |||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24030277 tcataaactactttgacaagcttatgaataatacataaaagcttatttatttggataag 24030219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 40697181 - 40697005
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||||  |||||  |||||| ||||| ||||| || |||  ||  ||||||||||||||    
T  40697181 tttggattggcttatttttgagcttatgaaaaatagcttatacaaataaataagcttttatgttaattcataagttttcaggaacaaaaattgtatcttc 40697082  T
Q  131 ataag----ttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||    ||        |||||| ||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  40697081 ataagctgttttttttcttcataaaataccttgacaagcttataaataatacataaaaacttatttatttgcataag 40697005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 184
Target Start/End: Original strand, 5559836 - 5559985
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagt 136  Q
    ||||||||||||||||||  ||||||||||||| ||||||  |||||  |||||| | ||| |||||||||||||||| ||||||||||||||||||||     
T  5559836 ttggcttatttttgagctcgtgaaaaatagcttatgcaaataaataagcttttatgtaaattcataaattctcactaacgaaaattgtatcttcataagc 5559935  T
Q  137 tg--nnnnnnncataaattaccttgacaagcttatgaataatacataaaa 184  Q
    ||         |||||| ||||||||| |||||||||| |||||||||||    
T  5559936 tgcttttttttcataaactaccttgacgagcttatgaagaatacataaaa 5559985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 40 - 173
Target Start/End: Original strand, 2577348 - 2577481
Alignment:
Q  40 gcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatg-aaaattgtatcttcataagttg 138  Q
    |||||||||||||||||||||||||||||| ||||||  |||||||| |||| ||||| ||||| |||||||||| | |||||||||| || | ||||||    
T  2577348 gcttatttttgagcttatgaaaaatagcttatgcaaataaataaattgttatgttaattcataagttctcactaacgaaaaattgtatttttacaagttg 2577447  T
Q  139 nnnnnnncataaattaccttgacaagcttatgaat 173  Q
           ||||||||||||||||||||||||||||    
T  2577448 -ttttttcataaattaccttgacaagcttatgaat 2577481  T

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Target: chr5; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 22201833 - 22202011
Alignment:
Q  22 aaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaatt-ctcactaatgaaaa 120  Q
    |||| ||| ||||| || |||||||||| |||||||||||||||| || | ||||  ||||| ||||||| ||| | ||||| || ||| |||| |||||    
T  22201833 aagggcccgtttggatttgcttattttttagcttatgaaaaatagtttatacaaataaataagtttttatgttatttcataactttctcgctaacgaaaa 22201932  T
Q  121 ttgtatcttcataag---ttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    ||||||||||| |||   ||        |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22201933 ttgtatcttcacaagcttttttttccttcataaactaccttgacaagcttatgaataatacataaaagcttatttattt 22202011  T

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Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 10537137 - 10537301
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataa-atttttattttaatacataaattctcactaatgaaaattgtatctt 129  Q
    ||||| |||||||||||||||| |||||||||||||||| ||||||   ||||  ||||||| ||||| ||||| |||||||||| |||||||||||| |    
T  10537137 tttggattggcttatttttgagtttatgaaaaatagcttatgcaaatatataagctttttatgttaattcataagttctcactaacgaaaattgtatcct 10537236  T
Q  130 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
         |||        |||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||    
T  10537237 -----gtt----ttttcataaactatcttgacaagcttataaataatacataaaagcttatttatttgcataag 10537301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 202
Target Start/End: Complemental strand, 41534806 - 41534628
Alignment:
Q  28 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaa-------- 119  Q
    |||||||| |||||||||||||||||||||||||||||| ||  |||||    ||| ||||||| ||||| ||||  |||||||||| ||||            
T  41534806 ccatttggattggcttatttttgagcttatgaaaaatagtttacgcaaa----taagtttttatgttaattcatatgttctcactaacgaaaccaacgaa 41534711  T
Q  120 -attgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
     |||||||||||||||| ||       | |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41534710 aattgtatcttcataagctgtttttt-cgtaaactaccttgacaagcttatgaataatacataaaagcttatttatttgcataa 41534628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 86 - 203
Target Start/End: Original strand, 13060568 - 13060684
Alignment:
Q  86 ttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaag 185  Q
    |||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| ||       |||||| |||||||||||||||||||| ||||||||||||    
T  13060568 ttttatgttaattcataagttctcactaacgaaaatggtaacttcataagctgtttttt-cataaactaccttgacaagcttatgaacaatacataaaag 13060666  T
Q  186 cttatttatttgaataag 203  Q
    |||||||||||| |||||    
T  13060667 cttatttatttgcataag 13060684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 35537019 - 35536846
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| |||||||||||| |||||||||||||||| ||||||  |||||  |||||| || || ||||| |||||| ||| |||||||||||||||    
T  35537019 tttggattgacttatttttgagattatgaaaaatagcttatgcaaataaataagcttttatatt-attcataagttctcagtaacgaaaattgtatcttc 35536921  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagctt---atgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| ||       |||||| || ||||||||||||   |||||||| |||||||||||||| |||||| |||||    
T  35536920 ataagctg-ttttttcataaactatcttgacaagcttatgatgaataacacataaaagcttatgtatttgcataag 35536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 40 - 134
Target Start/End: Complemental strand, 1943161 - 1943067
Alignment:
Q  40 gcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||| ||||||| |||| ||||||  |||||  ||||||  |||| ||||| ||||||||||||||||||||||||||||||    
T  1943161 gcttatttttgagcttacgaaaaatggcttatgcaaataaataagcttttatgctaattcataagttctcactaatgaaaattgtatcttcataa 1943067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 56 - 203
Target Start/End: Original strand, 13625456 - 13625603
Alignment:
Q  56 atgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattac 155  Q
    |||||||||||||| ||||||  |||||| |||||| |||||  |||| || ||||||| ||||||| |||||| ||||| ||       |||||| |||    
T  13625456 atgaaaaatagcttatgcaaataaataaacttttatattaatttataagttttcactaacgaaaattttatctttataagctgtttttatcataaactac 13625555  T
Q  156 cttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||  |||||||||||||||||| |||||||| |||||||||| |||||    
T  13625556 ctcaacaagcttatgaataataaataaaagcatatttatttgcataag 13625603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 1473417 - 1473360
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  1473417 cataaattaacttgacaagcttatgaataatacataaaagcttatttatttgcataag 1473360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 196
Target Start/End: Complemental strand, 6144898 - 6144749
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    ||||||||||||||||||||| || ||||||  || ||  |||||| ||||| ||||| ||||| ||||  |||||||||| |||||||| |            
T  6144898 ttttgagcttatgaaaaatagtttatgcaaataaacaagcttttatattaattcataagttctcgctaacaaaaattgtatattcataagct-atttttt 6144800  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||||||||    
T  6144799 cataaaataccttgacaagcttatgagtaatatataaaagcttatttattt 6144749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 203
Target Start/End: Complemental strand, 17657384 - 17657246
Alignment:
Q  64 tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaa 163  Q
    |||||| ||||||  |||||  |||||| ||||| ||||| |||||||||| |||||| ||||||||||||| ||       |||||| |||  || |||    
T  17657384 tagcttatgcaaataaataaccttttatgttaattcataagttctcactaacgaaaatcgtatcttcataagatgtttttt-cataaactacaatggcaa 17657286  T
Q  164 gcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  17657285 gcttatgaataatacataaaagcttatttatttgcataag 17657246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 29659220 - 29659132
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||| ||||| ||||||  ||||| ||||||| ||||| ||||| |||||||||||||||||||||  |||||||    
T  29659220 ttttgagcttatgaaaaagagcttatgcaaataaataagtttttatcttaattcataagttctcactaatgaaaattgtactttcataa 29659132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 196
Target Start/End: Complemental strand, 14243990 - 14243834
Alignment:
Q  41 cttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatg-aaaattgtatcttcataagttgn 139  Q
    ||||||||||||||||||||||||||||||||||||  ||||| |||||   ||||| ||||| ||||||||   | |||||||||| |||||||| ||     
T  14243990 cttatttttgagcttatgaaaaatagcttttgcaaataaataagtttttcagttaattcataagttctcactttcgaaaaattgtattttcataagctgt 14243891  T
Q  140 nnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
          |||||| |||||| |  | |||||||||| |||||| ||||||||||||||    
T  14243890 tttttccataaactaccttaaacaacttatgaatattacatagaagcttatttattt 14243834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 12987039 - 12987096
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  12987039 cataaactaccttgacaagcttatgaacaatacataaaagcttatttatttgcataag 12987096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 196
Target Start/End: Complemental strand, 6125461 - 6125298
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| ||| ||||||| ||||||||||||||||| ||||||  |||||  |||||| ||||| ||||| ||||||||||  || ||||||| |||    
T  6125461 tttggattgacttctttttgaacttatgaaaaatagcttatgcaaataaataagcttttatattaattcataatttctcactaacaaatattgtatattc 6125362  T
Q  131 ataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    ||||| |        |||||| ||| || | ||| |||||||||||||||||||| ||||||||||    
T  6125361 ataagct--atttttcataaaatacatttataagattatgaataatacataaaagtttatttattt 6125298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 29418678 - 29418766
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||| || || ||||||  ||||| ||||||| |||||  ||||||||||||||| |||||||||| ||||||||    
T  29418678 ttttgagcttatgaaaaaaagtttatgcaaataaataagtttttatcttaatttataaattctcactaacgaaaattgtaccttcataa 29418766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 42706856 - 42706800
Alignment:
Q  147 ataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  42706856 ataaactaccttgacaagcttatgaataatacttaaaagcttatttatttgcataag 42706800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 195
Target Start/End: Original strand, 11912021 - 11912176
Alignment:
Q  39 ggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttg 138  Q
    |||||||||  |||||||||||||||| |||  |||||  |||||  ||| || ||||| ||||| ||||||||||  ||||||||||||||||||| |     
T  11912021 ggcttatttacgagcttatgaaaaatatcttgagcaaataaataagctttcatgttaattcataagttctcactaacaaaaattgtatcttcataagct- 11912119  T
Q  139 nnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatt 195  Q
           || ||| ||| |||||||| ||||||| ||||||||||||||||||||||    
T  11912120 cttttttcacaaactactttgacaagattatgaacaatacataaaagcttatttatt 11912176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 41125849 - 41125766
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaa 114  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||   ||||  |||||| ||||| ||||| ||||||||||    
T  41125849 tttggattggcttatttttgagtttatgaaaaatagcttttgcaaatatataagcttttatgttaattcataagttctcactaa 41125766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 7565192 - 7565281
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagtt 137  Q
    |||||||||||||||| ||||| |||  |  ||||| ||||||| ||| | |||||||||||||||| |||||||||| |||||||||||    
T  7565192 ttgagcttatgaaaaagagcttatgcggataaataagtttttatcttagttcataaattctcactaacgaaaattgtaccttcataagtt 7565281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 43268646 - 43268703
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||||||| |||||    
T  43268646 cataaactaccttgaccagcttattaataatacataaaagcttatttatttgcataag 43268703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 26003157 - 26003069
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||||| ||| || |||  ||||| |||||||||||||  | ||  ||||||||| |||||||||||||||||||    
T  26003157 ttttgagcttatgaaaaataacttatgtaaataaataagtttttattttaatttacaagctctcactaacgaaaattgtatcttcataa 26003069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 41419628 - 41419531
Alignment:
Q  79 aataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataata 177  Q
    ||||| ||||||| |||||  |||| |||||||||| |||||||||||||||||||| ||       |||||| |||||||||||||||||||||||||    
T  41419628 aataagtttttatgttaattgataagttctcactaacgaaaattgtatcttcataagctg-ttttttcataaactaccttgacaagcttatgaataata 41419531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 197
Target Start/End: Original strand, 7364254 - 7364385
Alignment:
Q  65 agcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaag 164  Q
    ||||| ||||||  |||||  |||||| ||||| ||||| ||||||||||  || |||||||||||||||||||        ||||| |||||| |||||    
T  7364254 agcttatgcaaataaataagcttttatattaattcataagttctcactaacaaatattgtatcttcataagttgtttgttg-ataaactaccttaacaag 7364352  T
Q  165 cttatgaataatacataaaagcttatttatttg 197  Q
    ||||||||||||| ||| |||||||||| ||||    
T  7364353 cttatgaataataaatagaagcttatttttttg 7364385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 16722185 - 16722098
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||||||| || |||  ||| || |||||| |||||  ||||| ||||||||| ||||| |||||||||||||    
T  16722185 tttgagcttatgaaaaatagcttatgtaaataaatcaacttttatcttaatttataaactctcactaacgaaaagtgtatcttcataa 16722098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 39154672 - 39154775
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| |||||||||| |||| ||| ||||||||||||| ||||||  |||||  |||| | ||||| ||||| |||||| |||| ||||||| ||||||    
T  39154672 tttggattggcttattattgaacttctgaaaaatagcttatgcaaataaataagcttttgtgttaattcataagttctcaataataaaaattgcatcttc 39154771  T
Q  131 ataa 134  Q
    ||||    
T  39154772 ataa 39154775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 42558634 - 42558693
Alignment:
Q  37 ttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaa 96  Q
    ||||||||||||||||||||||||||||||||| ||||||  |||||  |||||||||||    
T  42558634 ttggcttatttttgagcttatgaaaaatagcttatgcaaataaataagcttttattttaa 42558693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 17128339 - 17128282
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||| |||| ||| |||||||||||||||||||||||||||||||| |||||    
T  17128339 cataaactactttgataagtttatgaataatacataaaagcttatttatttgcataag 17128282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 9477494 - 9477410
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 132  Q
    |||||||||||||||| || || ||||||  ||||| ||||||| ||||| ||||| |||||| ||| |||||||||| ||||||    
T  9477494 ttgagcttatgaaaaagagtttatgcaaataaataagtttttatcttaattcataagttctcagtaacgaaaattgtaccttcat 9477410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 203
Target Start/End: Original strand, 2878587 - 2878758
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaa-tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 129  Q
    ||||| ||||||||||||| ||||||||||||| |||||| || |||  |||||  |||||| |||||  | || || |||||||  |||||||||||||    
T  2878587 tttggattggcttattttttagcttatgaaaaaatagcttatgtaaataaataagcttttatgttaatttaaaagttttcactaacaaaaattgtatctt 2878686  T
Q  130 cataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    | |||  ||       ||||||  || ||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  2878687 c-taaactgttgttt-cataaaccacattgacaaacttatgaataatagataaaagcttatttatttgcataag 2878758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 3977536 - 3977485
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    |||||| |||||||||||||||||||||||| || ||||| |||||||||||    
T  3977536 cataaactaccttgacaagcttatgaataatgcacaaaagtttatttatttg 3977485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 135
Target Start/End: Original strand, 7364075 - 7364182
Alignment:
Q  28 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc 127  Q
    |||||||||||| |||||||||||||||||||||||| |||  || |||  | |||  |||||| ||||| ||||| |||||||||  ||  ||||||||    
T  7364075 ccatttgggttgacttatttttgagcttatgaaaaattgctcatgtaaataattaagcttttatgttaattcataacttctcactagcgagcattgtatc 7364174  T
Q  128 ttcataag 135  Q
     |||||||    
T  7364175 ctcataag 7364182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 20458485 - 20458572
Alignment:
Q  47 tttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    ||||||||||||||||||||||| || |||  |||||  ||||||||||||  |||| |||| || || ||||||||||| |||||||    
T  20458485 tttgagcttatgaaaaatagcttatgtaaataaataagcttttattttaatctataagttctgaccaacgaaaattgtattttcataa 20458572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 22573818 - 22573779
Alignment:
Q  27 cccatttgggttggcttatttttgagcttatgaaaaatag 66  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  22573818 cccatttggattggcttatttttgagcttatgaaaaatag 22573779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 35083414 - 35083323
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaatt 122  Q
    ||||| |||| ||||||||||| |||||| |||||| || ||||||  |||||  |||||| ||||| ||||| |||||||| |||||||||    
T  35083414 tttggattggtttatttttgagtttatgataaatagtttatgcaaataaataagcttttatgttaattcataagttctcactgatgaaaatt 35083323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 196
Target Start/End: Original strand, 38461206 - 38461357
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaat--tctcactaatgaaaattgtatcttcataagttgnnnnn 143  Q
    |||| ||||||||||||||||||| || |||  ||||| |||||||||||||  |||| |  |||||||||  |||||| |||||||||||  ||         
T  38461206 ttttaagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagttctctcactaacaaaaattatatcttcataaactg-tttt 38461304  T
Q  144 nncataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
      |||||| ||| || |||| ||||| ||||||||||||| ||||||||||||    
T  38461305 ttcataaaatacatttacaaacttataaataatacataaaggcttatttattt 38461357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 1943064 - 1943014
Alignment:
Q  153 taccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||||||||||| ||||||||||||| |||||||| ||| |||||    
T  1943064 taccttgacaagcttatggataatacataaaaacttatttacttgcataag 1943014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 134
Target Start/End: Complemental strand, 2670237 - 2670132
Alignment:
Q  28 ccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatc 127  Q
    |||||||| |||  |||||||  |||||||||||| ||  || ||||||  ||||||||||||| ||| | |||||||||||||||| ||||||| |||     
T  2670237 ccatttggattgatttattttcaagcttatgaaaagtaatttatgcaaataaataaatttttatgttatt-cataaattctcactaacgaaaattatatt 2670139  T
Q  128 ttcataa 134  Q
    |||||||    
T  2670138 ttcataa 2670132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 11163193 - 11163291
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 129  Q
    ||||| |||||||||||||||||| ||||  || | ||||| ||||  |||||  |||||| ||||| ||||| ||| |||||| ||||||||||||||    
T  11163193 tttggattggcttatttttgagctaatgatgaacaacttttacaaataaataagcttttatgttaattcataagttcgcactaacgaaaattgtatctt 11163291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 197
Target Start/End: Original strand, 11706812 - 11706994
Alignment:
Q  21 aaaggacccatttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaa------taaatttttattttaatacataaattctcactaa 114  Q
    ||||| ||||||| | ||||||||||||| ||||||| ||||||||||| ||||||  ||      |||  || ||| || || ||||| ||||||  ||    
T  11706812 aaagggcccatttcgattggcttattttttagcttatcaaaaatagcttatgcaaataaataagcttaagcttctatgttcattcataagttctcaaaaa 11706911  T
Q  115 tg-aaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
     | ||||||||||||||||||||||       |||||| ||| |||||||| ||| |||| |||||||||||||||||||||||    
T  11706912 agaaaaattgtatcttcataagttg-tttcttcataaaatacattgacaagtttaggaatgatacataaaagcttatttatttg 11706994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 43265967 - 43266017
Alignment:
Q  147 ataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    ||||| || ||| |||||||||||||| |||||||||||||||||||||||    
T  43265967 ataaactatcttaacaagcttatgaatgatacataaaagcttatttatttg 43266017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 589317 - 589221
Alignment:
Q  42 ttatttttgagcttatgaaaaatagcttttgcaaagtaataa-atttttattttaatacataaattctcactaatgaaaattgtatcttcataagtt 137  Q
    |||||||||||||||| ||||||||||| ||||||  |||||  ||||||| ||||| ||||| || ||||||   ||| || ||||||||||||||    
T  589317 ttatttttgagcttataaaaaatagcttatgcaaataaataagttttttatgttaattcataagttttcactatcaaaatttttatcttcataagtt 589221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 2670136 - 2670080
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||||| ||||||||||| |||||||||| |||||||||| || |||||||| ||||    
T  2670136 cataaactaccttgacaaacttatgaatagtacataaaagattgtttatttgcataa 2670080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 196
Target Start/End: Original strand, 3520530 - 3520577
Alignment:
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  3520530 taaactaccttgacaagcttatgaataatac-taaaaggttatttattt 3520577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 11991352 - 11991316
Alignment:
Q  160 acaagcttatgaataatacataaaagcttatttattt 196  Q
    |||||||||| ||||||||||||||||||||||||||    
T  11991352 acaagcttataaataatacataaaagcttatttattt 11991316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Complemental strand, 27806091 - 27805987
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaa-tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatctt 129  Q
    ||||| |||||||| |||| ||||||| ||||| |||||| ||||||  |||||| |||||| |||||  |||| || |||||||  |||||||||||||    
T  27806091 tttggattggcttactttttagcttattaaaaaatagcttatgcaaataaataaacttttatgttaatttataagttttcactaacaaaaattgtatctt 27805992  T
Q  130 cataa 134  Q
     ||||    
T  27805991 tataa 27805987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 135
Target Start/End: Original strand, 29136731 - 29136841
Alignment:
Q  27 cccatttgggttggcttatttttgagcttatgaaaaa--tagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgt 124  Q
    ||||||||| ||| ||||||||| ||||||| |||||  ||| || ||||||  |||||  |||||| ||||| ||||| | ||||| || | |||||||    
T  29136731 cccatttggattgacttatttttcagcttataaaaaaaatagtttatgcaaataaataagcttttatgttaattcataagtcctcaccaacggaaattgt 29136830  T
Q  125 atcttcataag 135  Q
    |||||||||||    
T  29136831 atcttcataag 29136841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 203
Target Start/End: Complemental strand, 7984155 - 7984109
Alignment:
Q  157 ttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||| |||||||||||||||||||| |||| ||||||| |||||    
T  7984155 ttgacaaacttatgaataatacataaaaacttagttatttgcataag 7984109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 11163294 - 11163344
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||||| ||||| ||||||||||||||| |||||||||| |||||| ||||    
T  11163294 cataaactacctcgacaagcttatgaatcatacataaaaacttattgattt 11163344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 17868115 - 17868181
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaat 97  Q
    ||||| ||||||||||||| |||||||| |||||||||| ||||||  |||||  |||||| |||||    
T  17868115 tttggattggcttattttttagcttatggaaaatagcttatgcaaataaataaccttttatgttaat 17868181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 17868201 - 17868259
Alignment:
Q  146 cataaattaccttgacaagcttat-gaataatacataaaagcttatttatttgaataag 203  Q
    |||||| |||||||||||||||||  ||||||||| ||||||||| ||||||| |||||    
T  17868201 cataaactaccttgacaagcttataaaataatacacaaaagcttacttatttgcataag 17868259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 184
Target Start/End: Complemental strand, 6150437 - 6150400
Alignment:
Q  147 ataaattaccttgacaagcttatgaataatacataaaa 184  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  6150437 ataaactaccttgacaaacttatgaataatacataaaa 6150400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 13739404 - 13739359
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaa 76  Q
    ||||| |||||||||||||||| |||||||||||| ||| ||||||    
T  13739404 tttggattggcttatttttgagtttatgaaaaataacttatgcaaa 13739359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 25332263 - 25332320
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||||||| |||| ||||| ||||||| || || ||||||||||||| |||||    
T  25332263 cataaattaccttaacaaacttataaataatatattaatgcttatttatttgcataag 25332320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 135
Target Start/End: Complemental strand, 6150966 - 6150863
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| || |||| ||||||||||||||||||||| ||| |||||| ||   || |||||| ||||| | ||| |||||| |||  |||||||||| |||    
T  6150966 tttggatttgcttctttttgagcttatgaaaaataacttatgcaaa-tagctaagttttatgttaattcgtaagttctcagtaacaaaaattgtatattc 6150868  T
Q  131 ataag 135  Q
    |||||    
T  6150867 ataag 6150863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 18602691 - 18602618
Alignment:
Q  118 aaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatt 191  Q
    ||||||||| |||||||||||       |||||  |||||| |||||||||||||||||| |||||| ||||||    
T  18602691 aaattgtatattcataagttgtttttttcataagctaccttaacaagcttatgaataataaataaaaacttatt 18602618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 202
Target Start/End: Complemental strand, 26003058 - 26003002
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    |||||| || ||| |||| ||||| |||||||||||||| |||||||||||| ||||    
T  26003058 cataaaataacttaacaaacttataaataatacataaaaacttatttatttgcataa 26003002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 134
Target Start/End: Original strand, 40152802 - 40152890
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||| ||||||||||| | ||| ||||||  |||||  |||||| ||||| ||||| ||||||  || ||||||| |||||||||||    
T  40152802 ttttgaacttatgaaaaacatcttatgcaaataaataatcttttatattaattcataagttctcaagaacgaaaattttatcttcataa 40152890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 203
Target Start/End: Complemental strand, 24922 - 24749
Alignment:
Q  31 tttgggttggcttatttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttc 130  Q
    ||||| ||| |||||||||||||||||||||| |||||| ||||||  ||||| ||||||| |||||  |||| |||||||||||||| ||||||||||     
T  24922 tttggattgtcttatttttgagcttatgaaaagtagcttatgcaaataaataagtttttatgttaatttataagttctcactaatgaatattgtatcttg 24823  T
Q  131 ataagttgnnnnnnncataaattacc--ttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    || || ||       |||||| ||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24822 attagctg-ttttttcataaactaccttttgacaagcttatgaataatacataaaagcttatttatttgcataag 24749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 1218 - 1062
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    |||| ||||||||||||||| ||| ||||||  |||||  |||||| ||||   |||| ||||||||||||||| |||||||||||||||||            
T  1218 ttttaagcttatgaaaaataacttatgcaaataaataagcttttatattaaagtataagttctcactaatgaaatttgtatcttcataagtt-atttttc 1120  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||||||| |||| |||||| |||||| ||||||||||||||||||| |||||    
T  1119 cataaattaccttaacaatcttatggataataaataaaagcttatttatttgcataag 1062  T

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Target: scaffold0299 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 203
Target Start/End: Original strand, 11227 - 11382
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnn 145  Q
    |||| ||||||||||||||| ||| |||||| ||||||  |||||| ||||   |||| |||||||||||||||  ||||||||||||||||            
T  11227 ttttaagcttatgaaaaataacttatgcaaa-taataagcttttatattaaagtataagttctcactaatgaaatatgtatcttcataagtt-atttttc 11324  T
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||||||| ||||||| ||| |||||| ||||||||||||||||||| |||||    
T  11325 cataaattaccttaacaagctaatggataataaataaaagcttatttatttgcataag 11382  T

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Target: scaffold0041 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 104 - 202
Target Start/End: Original strand, 108978 - 109073
Alignment:
Q  104 attctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataa 202  Q
    ||||| ||||| ||||||||||||||||||||||        ||||||  |||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  108978 attcttactaacgaaaattgtatcttcataagtt---tttttcataaaccaccttgacaagcttatgagtaatacataaaggcttatttatttgcataa 109073  T

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Target: scaffold0041; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 203
Target Start/End: Original strand, 109103 - 109145
Alignment:
Q  161 caagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||    
T  109103 caagcttatgaataatacatagaagtttatttatttgcataag 109145  T

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Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 97231 - 97288
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||| ||||||||| |||||||||||| ||||||| |||||||||||||| |||||    
T  97231 cataaactaccttgactagcttatgaatactacataatagcttatttatttgcataag 97288  T

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Target: scaffold0012 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 46 - 203
Target Start/End: Complemental strand, 178662 - 178504
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaa-tacataaattctcactaatgaaaattgtatcttcataagttgnnnnnn 144  Q
    ||||||||||||||||||||| || || |||  ||||| |||  ||||||| |  ||||  ||| ||||| |||||||||||||||||||  |           
T  178662 ttttgagcttatgaaaaatagtttatgtaaataaataattttaaattttaaatttataagctcttactaacgaaaattgtatcttcataaactatttttt 178563  T
Q  145 ncataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
     |||||| |||||| | || ||||| ||||||||||||||||||||||||||| |||||    
T  178562 tcataaaataccttaagaaacttataaataatacataaaagcttatttatttgcataag 178504  T

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Target: scaffold0512 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 196
Target Start/End: Complemental strand, 4222 - 4076
Alignment:
Q  48 ttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnnca 147  Q
    |||||||||||||||||||||| ||||||  ||| |  |||||| |||||  |||| ||| |||||| ||||||||||| | |||||| |        ||    
T  4222 ttgagcttatgaaaaatagcttatgcaaatcaatgagcttttatgttaatttataagttcccactaacgaaaattgtat-tacataagct-attttttca 4125  T
Q  148 taaattaccttgacaagcttatgaataatacataaaagcttatttattt 196  Q
    |||| || ||| |||||||||| |||||||||| |||||||||||||||    
T  4124 taaactatctttacaagcttataaataatacattaaagcttatttattt 4076  T

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Target: scaffold0332 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 203
Target Start/End: Original strand, 14790 - 14828
Alignment:
Q  165 cttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  14790 cttatgaataatacataaaagcttatttatttgtataag 14828  T

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Target: scaffold0057 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 24421 - 24470
Alignment:
Q  153 taccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  24421 taccttgacaagcttatgaataatacatacaagc-tatttatttgcataag 24470  T

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Target: scaffold0057; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 43842 - 43892
Alignment:
Q  147 ataaattaccttgacaagcttatgaataatacataaaagcttatttatttg 197  Q
    ||||| ||||| ||||||||| |||||||||||||||| ||||||||||||    
T  43842 ataaactacctcgacaagcttttgaataatacataaaaacttatttatttg 43892  T

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Target: scaffold1130 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 2403 - 2325
Alignment:
Q  54 ttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcat 132  Q
    |||| ||||||||||| || |||  |||||  ||||||||||||  ||||| ||||  |||||||||||||||||||||    
T  2403 ttatcaaaaatagcttatgtaaataaataagattttattttaatttataaactctccttaatgaaaattgtatcttcat 2325  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 195
Target Start/End: Complemental strand, 227853 - 227718
Alignment:
Q  60 aaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataagttgnnnnnnncataaattaccttg 159  Q
    |||| ||||| ||||||| | |||  |||||| ||||| |||||  ||| ||||| ||||||||||| |||||||| ||       |||||| ||||||     
T  227853 aaaagagcttgtgcaaagaattaagcttttatgttaattcataagatcttactaacgaaaattgtatattcataagctgtttttttcataaactacctta 227754  T
Q  160 acaagcttatgaataatacataaaagcttatttatt 195  Q
    |||| ||||| |||| ||||| || |||||||||||    
T  227753 acaaacttataaatactacattaatgcttatttatt 227718  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 242572 - 242654
Alignment:
Q  52 gcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||||||||||||||||| || |||  ||||  |||||||||||||  ||||  |||| |||| |||||| ||||||||||||    
T  242572 gcttatgaaaaatagcttatgtaaataaataggtttttattttaatttataagctctcgctaacgaaaatcgtatcttcataa 242654  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 142400 - 142343
Alignment:
Q  146 cataaattaccttgacaagcttatgaataatacataaaagcttatttatttgaataag 203  Q
    |||||||||| || | |||  ||||||||||||||||||||| ||||||||| |||||    
T  142400 cataaattacattaataagtatatgaataatacataaaagctcatttatttgcataag 142343  T

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Target: scaffold0048 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 134
Target Start/End: Complemental strand, 59427 - 59339
Alignment:
Q  46 ttttgagcttatgaaaaatagcttttgcaaagtaataaatttttattttaatacataaattctcactaatgaaaattgtatcttcataa 134  Q
    |||| ||||||||||||||||||| || |||  ||||| |||||||||||||  ||||  | ||| || |||| || ||||||||||||    
T  59427 ttttaagcttatgaaaaatagcttatgtaaataaataagtttttattttaatttataagctttcattagtgaatatcgtatcttcataa 59339  T

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