View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20532_high_7 (Length: 244)

Name: NF20532_high_7
Description: NF20532
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20532_high_7
NF20532_high_7
[»] scaffold0042 (1 HSPs)
scaffold0042 (46-230)||(4417-4601)
[»] chr8 (31 HSPs)
chr8 (46-230)||(3842673-3842857)
chr8 (46-231)||(16746145-16746330)
chr8 (46-227)||(22148553-22148734)
chr8 (57-213)||(29075895-29076051)
chr8 (57-213)||(29086146-29086302)
chr8 (57-213)||(32078658-32078814)
chr8 (57-213)||(36087677-36087833)
chr8 (57-210)||(3349600-3349753)
chr8 (57-210)||(9367449-9367602)
chr8 (57-210)||(13689535-13689688)
chr8 (57-210)||(36302681-36302834)
chr8 (57-213)||(251563-251719)
chr8 (57-213)||(814664-814820)
chr8 (57-213)||(849937-850093)
chr8 (54-213)||(19138432-19138590)
chr8 (54-213)||(30315687-30315846)
chr8 (57-213)||(6160192-6160348)
chr8 (54-213)||(15781673-15781832)
chr8 (54-213)||(26120062-26120221)
chr8 (54-213)||(19428074-19428235)
chr8 (46-179)||(21297867-21298000)
chr8 (54-210)||(44490866-44491022)
chr8 (46-166)||(45569042-45569162)
chr8 (46-184)||(23792376-23792514)
chr8 (46-157)||(19942163-19942274)
chr8 (54-155)||(24834268-24834369)
chr8 (54-155)||(22672711-22672812)
chr8 (54-155)||(17287271-17287372)
chr8 (54-166)||(17015502-17015614)
chr8 (54-166)||(17541587-17541699)
chr8 (98-155)||(18676651-18676708)
[»] scaffold0084 (1 HSPs)
scaffold0084 (46-230)||(57736-57920)
[»] chr6 (32 HSPs)
chr6 (46-230)||(22307890-22308074)
chr6 (57-213)||(3671152-3671308)
chr6 (57-213)||(25985185-25985341)
chr6 (57-213)||(34808099-34808255)
chr6 (54-213)||(12864636-12864795)
chr6 (54-213)||(20030858-20031017)
chr6 (54-213)||(26874507-26874666)
chr6 (54-213)||(32962883-32963042)
chr6 (47-184)||(17609425-17609562)
chr6 (57-210)||(26035128-26035281)
chr6 (54-197)||(9113446-9113589)
chr6 (57-210)||(12717776-12717929)
chr6 (60-213)||(16958719-16958872)
chr6 (58-231)||(6157251-6157424)
chr6 (46-219)||(11205061-11205234)
chr6 (46-219)||(25725433-25725606)
chr6 (46-227)||(18554386-18554567)
chr6 (54-197)||(28252521-28252664)
chr6 (54-196)||(27412190-27412332)
chr6 (54-197)||(27505033-27505177)
chr6 (54-210)||(32301986-32302142)
chr6 (54-197)||(27503409-27503552)
chr6 (46-227)||(17063318-17063499)
chr6 (46-166)||(22385705-22385829)
chr6 (54-157)||(26043301-26043404)
chr6 (130-227)||(21127211-21127308)
chr6 (54-155)||(14054483-14054584)
chr6 (46-107)||(17609637-17609698)
chr6 (54-155)||(18434454-18434555)
chr6 (54-157)||(19469555-19469658)
chr6 (98-155)||(13434875-13434932)
chr6 (46-147)||(17446759-17446860)
[»] chr3 (62 HSPs)
chr3 (46-230)||(17282345-17282529)
chr3 (46-226)||(8741056-8741236)
chr3 (46-230)||(1063278-1063460)
chr3 (46-231)||(4432900-4433085)
chr3 (46-231)||(13262582-13262767)
chr3 (46-231)||(1784986-1785171)
chr3 (46-231)||(7795530-7795715)
chr3 (46-231)||(9381573-9381758)
chr3 (46-231)||(11207004-11207189)
chr3 (46-210)||(8996881-8997045)
chr3 (57-213)||(20674124-20674280)
chr3 (54-213)||(37884730-37884889)
chr3 (46-227)||(17016918-17017099)
chr3 (57-213)||(505097-505253)
chr3 (57-213)||(4753473-4753629)
chr3 (57-213)||(5537948-5538104)
chr3 (57-213)||(5580560-5580716)
chr3 (57-213)||(8784417-8784573)
chr3 (57-213)||(12287907-12288063)
chr3 (57-213)||(14475375-14475531)
chr3 (57-213)||(16391975-16392131)
chr3 (57-213)||(38204406-38204562)
chr3 (54-213)||(19788173-19788332)
chr3 (54-213)||(23767045-23767204)
chr3 (57-210)||(5866626-5866779)
chr3 (57-210)||(11273315-11273468)
chr3 (57-210)||(24384448-24384601)
chr3 (57-210)||(24669624-24669777)
chr3 (57-213)||(5520022-5520178)
chr3 (46-166)||(15848037-15848157)
chr3 (57-231)||(12238526-12238700)
chr3 (46-219)||(15652029-15652203)
chr3 (46-166)||(12753759-12753879)
chr3 (57-231)||(9982797-9982971)
chr3 (57-183)||(41693403-41693529)
chr3 (46-166)||(29934537-29934657)
chr3 (46-166)||(29983691-29983811)
chr3 (54-213)||(6491273-6491432)
chr3 (54-213)||(13373595-13373754)
chr3 (54-213)||(13384189-13384348)
chr3 (54-213)||(29462145-29462304)
chr3 (54-211)||(10627877-10628034)
chr3 (46-146)||(47541929-47542029)
chr3 (54-196)||(28315182-28315324)
chr3 (46-166)||(13147180-13147301)
chr3 (54-197)||(16396961-16397104)
chr3 (54-196)||(39381835-39381977)
chr3 (48-136)||(14312416-14312504)
chr3 (54-155)||(5211357-5211458)
chr3 (53-157)||(16031443-16031547)
chr3 (54-155)||(2560133-2560234)
chr3 (46-151)||(15960451-15960556)
chr3 (54-155)||(53057832-53057933)
chr3 (54-97)||(6183009-6183052)
chr3 (54-155)||(11188942-11189043)
chr3 (46-111)||(12410861-12410926)
chr3 (54-155)||(21639788-21639889)
chr3 (54-166)||(19886186-19886298)
chr3 (46-153)||(14078448-14078555)
chr3 (57-155)||(11221742-11221840)
chr3 (54-155)||(11222493-11222594)
chr3 (114-166)||(17240038-17240090)
[»] chr7 (32 HSPs)
chr7 (46-230)||(18440320-18440504)
chr7 (46-231)||(9169306-9169491)
chr7 (57-213)||(4221744-4221900)
chr7 (57-213)||(8003077-8003233)
chr7 (57-213)||(9094123-9094279)
chr7 (57-213)||(40043115-40043271)
chr7 (57-213)||(42875584-42875740)
chr7 (54-213)||(176623-176782)
chr7 (54-213)||(457997-458156)
chr7 (46-213)||(2706624-2706791)
chr7 (54-213)||(17951125-17951284)
chr7 (54-213)||(20988790-20988949)
chr7 (57-210)||(24743837-24743990)
chr7 (57-210)||(26391108-26391261)
chr7 (57-213)||(1997292-1997448)
chr7 (57-213)||(6868241-6868397)
chr7 (57-213)||(6878883-6879039)
chr7 (57-213)||(26654347-26654503)
chr7 (54-213)||(8627078-8627237)
chr7 (54-213)||(22098874-22099033)
chr7 (46-227)||(13175591-13175772)
chr7 (54-210)||(11014921-11015077)
chr7 (54-196)||(11004312-11004454)
chr7 (54-213)||(9442996-9443155)
chr7 (60-154)||(15705614-15705708)
chr7 (54-155)||(13879083-13879184)
chr7 (54-166)||(15466703-15466815)
chr7 (54-155)||(4413082-4413183)
chr7 (98-167)||(16311082-16311151)
chr7 (46-166)||(16408741-16408861)
chr7 (54-157)||(13028040-13028143)
chr7 (61-155)||(27870655-27870749)
[»] chr2 (27 HSPs)
chr2 (46-231)||(28722247-28722432)
chr2 (46-231)||(26878774-26878959)
chr2 (46-231)||(24415955-24416140)
chr2 (54-213)||(43092385-43092544)
chr2 (46-184)||(24802627-24802765)
chr2 (57-213)||(10276696-10276852)
chr2 (54-213)||(4219602-4219761)
chr2 (54-213)||(9898520-9898679)
chr2 (54-213)||(24328696-24328855)
chr2 (54-213)||(29253926-29254085)
chr2 (57-210)||(11396122-11396275)
chr2 (46-227)||(19303361-19303542)
chr2 (57-213)||(39171041-39171197)
chr2 (57-213)||(43354139-43354295)
chr2 (54-213)||(9763710-9763869)
chr2 (54-213)||(40250315-40250474)
chr2 (57-213)||(22915807-22915963)
chr2 (54-213)||(34791164-34791323)
chr2 (46-219)||(22773470-22773643)
chr2 (54-196)||(35262710-35262852)
chr2 (54-196)||(35273335-35273477)
chr2 (54-111)||(21162996-21163053)
chr2 (46-151)||(24843131-24843236)
chr2 (54-166)||(25828094-25828206)
chr2 (54-152)||(22782685-22782783)
chr2 (54-153)||(22257134-22257233)
chr2 (93-151)||(20567201-20567259)
[»] scaffold0407 (1 HSPs)
scaffold0407 (75-230)||(13071-13226)
[»] chr5 (52 HSPs)
chr5 (46-231)||(17456357-17456542)
chr5 (46-231)||(20552847-20553032)
chr5 (46-231)||(21705008-21705193)
chr5 (46-231)||(24982454-24982639)
chr5 (46-231)||(34052992-34053177)
chr5 (46-231)||(23393441-23393626)
chr5 (54-213)||(1120954-1121113)
chr5 (54-213)||(27621824-27621983)
chr5 (54-213)||(39353546-39353705)
chr5 (54-213)||(43620946-43621105)
chr5 (54-231)||(19465004-19465181)
chr5 (57-213)||(6976856-6977012)
chr5 (57-213)||(9337004-9337160)
chr5 (57-213)||(14031092-14031248)
chr5 (57-213)||(22677166-22677322)
chr5 (57-213)||(23297327-23297483)
chr5 (57-213)||(23363160-23363316)
chr5 (57-213)||(24568138-24568294)
chr5 (57-213)||(24826530-24826686)
chr5 (57-213)||(34772959-34773115)
chr5 (57-213)||(35216553-35216709)
chr5 (57-213)||(36592172-36592328)
chr5 (57-213)||(37739622-37739778)
chr5 (54-213)||(5300194-5300353)
chr5 (54-213)||(31834530-31834689)
chr5 (54-213)||(40391408-40391567)
chr5 (57-210)||(14456667-14456820)
chr5 (57-210)||(14567708-14567861)
chr5 (57-210)||(15741022-15741175)
chr5 (54-213)||(16002948-16003107)
chr5 (46-227)||(23487478-23487659)
chr5 (60-213)||(24808966-24809119)
chr5 (57-210)||(27461215-27461368)
chr5 (54-213)||(22147566-22147725)
chr5 (54-231)||(31419697-31419874)
chr5 (54-210)||(17608115-17608271)
chr5 (46-166)||(25112995-25113115)
chr5 (46-166)||(25172086-25172206)
chr5 (46-181)||(11209077-11209212)
chr5 (46-227)||(13532912-13533093)
chr5 (54-210)||(17719971-17720127)
chr5 (54-210)||(31349587-31349743)
chr5 (54-210)||(36688751-36688907)
chr5 (54-196)||(23697847-23697989)
chr5 (54-196)||(27051889-27052031)
chr5 (54-196)||(30237078-30237220)
chr5 (54-196)||(42043847-42043989)
chr5 (57-150)||(39500542-39500635)
chr5 (54-166)||(31144398-31144510)
chr5 (54-155)||(26764402-26764503)
chr5 (54-166)||(26783332-26783444)
chr5 (46-166)||(21200099-21200219)
[»] scaffold0068 (1 HSPs)
scaffold0068 (46-231)||(8717-8902)
[»] chr1 (22 HSPs)
chr1 (54-231)||(7690420-7690597)
chr1 (54-213)||(5640679-5640838)
chr1 (57-213)||(3181297-3181453)
chr1 (57-213)||(5842900-5843056)
chr1 (57-213)||(7516980-7517136)
chr1 (57-213)||(38104781-38104937)
chr1 (54-213)||(4176995-4177154)
chr1 (54-213)||(12615292-12615451)
chr1 (54-211)||(21876841-21876998)
chr1 (57-210)||(47608908-47609061)
chr1 (54-213)||(12740221-12740380)
chr1 (57-213)||(19186901-19187058)
chr1 (46-227)||(22018249-22018430)
chr1 (57-213)||(38094155-38094312)
chr1 (54-196)||(35639024-35639166)
chr1 (54-196)||(36237416-36237558)
chr1 (54-196)||(51630178-51630320)
chr1 (46-127)||(20874280-20874361)
chr1 (46-155)||(23023802-23023911)
chr1 (46-151)||(18613845-18613950)
chr1 (54-155)||(22431148-22431249)
chr1 (54-155)||(21125404-21125505)
[»] scaffold0047 (2 HSPs)
scaffold0047 (46-197)||(33889-34040)
scaffold0047 (54-213)||(41418-41577)
[»] chr4 (30 HSPs)
chr4 (46-197)||(14837055-14837206)
chr4 (46-197)||(16316484-16316635)
chr4 (46-208)||(3389605-3389767)
chr4 (54-213)||(19945269-19945428)
chr4 (54-213)||(27815877-27816036)
chr4 (46-227)||(14711740-14711921)
chr4 (57-213)||(18131180-18131336)
chr4 (57-213)||(36028059-36028215)
chr4 (57-213)||(55746183-55746339)
chr4 (54-213)||(460328-460487)
chr4 (54-213)||(22006182-22006341)
chr4 (54-213)||(27175839-27175998)
chr4 (54-213)||(30927424-30927583)
chr4 (57-210)||(10741532-10741685)
chr4 (57-210)||(10955301-10955454)
chr4 (57-210)||(27666341-27666494)
chr4 (57-213)||(16265633-16265789)
chr4 (54-213)||(14844583-14844742)
chr4 (54-213)||(17927864-17928023)
chr4 (54-213)||(40455291-40455450)
chr4 (57-231)||(5021904-5022078)
chr4 (46-184)||(16820318-16820456)
chr4 (54-210)||(18753424-18753580)
chr4 (54-196)||(49517302-49517444)
chr4 (54-197)||(18065739-18065882)
chr4 (48-125)||(11470428-11470505)
chr4 (54-155)||(17246516-17246617)
chr4 (57-111)||(4988828-4988882)
chr4 (90-166)||(10662242-10662318)
chr4 (90-166)||(10876387-10876463)
[»] scaffold0105 (1 HSPs)
scaffold0105 (57-213)||(37925-38081)
[»] scaffold0443 (1 HSPs)
scaffold0443 (46-227)||(2015-2196)
[»] scaffold0017 (1 HSPs)
scaffold0017 (46-227)||(41346-41527)
[»] scaffold0022 (4 HSPs)
scaffold0022 (54-213)||(44725-44884)
scaffold0022 (54-155)||(36377-36478)
scaffold0022 (54-155)||(134437-134538)
scaffold0022 (46-144)||(158070-158168)
[»] scaffold0382 (1 HSPs)
scaffold0382 (46-184)||(2289-2427)
[»] scaffold0012 (1 HSPs)
scaffold0012 (46-184)||(11329-11467)
[»] scaffold1820 (1 HSPs)
scaffold1820 (46-179)||(562-695)
[»] scaffold1507 (1 HSPs)
scaffold1507 (46-184)||(379-517)
[»] scaffold0011 (2 HSPs)
scaffold0011 (46-166)||(165719-165839)
scaffold0011 (98-155)||(66481-66538)
[»] scaffold0211 (1 HSPs)
scaffold0211 (46-184)||(545-683)
[»] scaffold0038 (1 HSPs)
scaffold0038 (54-197)||(52721-52864)
[»] scaffold0161 (2 HSPs)
scaffold0161 (46-156)||(11172-11282)
scaffold0161 (46-156)||(15845-15955)
[»] scaffold0035 (1 HSPs)
scaffold0035 (54-166)||(110653-110765)
[»] scaffold0116 (1 HSPs)
scaffold0116 (46-159)||(21997-22110)
[»] scaffold0315 (1 HSPs)
scaffold0315 (46-166)||(7600-7720)
[»] scaffold0439 (1 HSPs)
scaffold0439 (54-155)||(7766-7867)
[»] scaffold0113 (1 HSPs)
scaffold0113 (46-155)||(2128-2237)
[»] scaffold0004 (1 HSPs)
scaffold0004 (54-155)||(210346-210447)
[»] scaffold0317 (1 HSPs)
scaffold0317 (54-166)||(11557-11669)
[»] scaffold0003 (1 HSPs)
scaffold0003 (54-155)||(98631-98732)
[»] scaffold0498 (1 HSPs)
scaffold0498 (46-146)||(1264-1364)
[»] scaffold0359 (1 HSPs)
scaffold0359 (54-155)||(6787-6888)
[»] scaffold0056 (1 HSPs)
scaffold0056 (54-155)||(26713-26814)
[»] scaffold0037 (1 HSPs)
scaffold0037 (46-157)||(76191-76302)
[»] scaffold0217 (1 HSPs)
scaffold0217 (54-155)||(18006-18107)
[»] scaffold0290 (1 HSPs)
scaffold0290 (98-166)||(19706-19774)
[»] scaffold0146 (1 HSPs)
scaffold0146 (114-166)||(14110-14162)


Alignment Details
Target: scaffold0042 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 46 - 230
Target Start/End: Original strand, 4417 - 4601
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4417 cttcaagaatgtcccatagctcttcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttgg 4516  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 230  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||||||    
T  4517 agcttttccagaatctgatttcctgtcagcagtatcatagtcatgtttgacactattgtattttgtagatgtagtggattcatct 4601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 157; Significance: 1e-83; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 46 - 230
Target Start/End: Original strand, 3842673 - 3842857
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3842673 cttcaagaatgtcccatagctcttcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttgg 3842772  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 230  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||||||||||||||||||||||||    
T  3842773 agcttttccagaatctgatttcctgtcagcagtatcatagtcatgtttgacactattgtattttgtagatgtagtggattcatct 3842857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 16746145 - 16746330
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  16746145 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 16746244  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    ||||||||||||||||||||| || ||||| ||| |||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  16746245 agcttttccagaatctgatttcctttcagcagtaccatagtcatgtttgacactagtgtattttaaggatgtagttgattcctctc 16746330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 22148734 - 22148553
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  22148734 cttcaagaatatcccacagctcttcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaattcttctggatctccattgaactttgg 22148635  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 227  Q
    | |||||||||||||||||||  |||||| |||| |||||| |||  | ||||| |||||  |||||||||||| |||||||    
T  22148634 accttttccagaatctgatttcttgtcagatgtaccatagtcatgactaacattattgtaccttgtagatgtagaggattca 22148553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 29075895 - 29076051
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  29075895 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 29075994  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  29075995 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 29076051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 29086146 - 29086302
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  29086146 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 29086245  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  29086246 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 29086302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 32078814 - 32078658
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  32078814 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 32078715  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  32078714 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 32078658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 36087677 - 36087833
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  36087677 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 36087776  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  36087777 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 36087833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 3349753 - 3349600
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  3349753 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 3349654  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  3349653 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 3349600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 9367449 - 9367602
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  9367449 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 9367548  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  9367549 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 9367602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 13689688 - 13689535
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  13689688 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 13689589  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  13689588 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 13689535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 36302681 - 36302834
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  36302681 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 36302780  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  36302781 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 36302834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 251563 - 251719
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||| ||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  251563 tcccatagctcttcatccaatcccataataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 251662  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  251663 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 251719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 814664 - 814820
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||| ||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  814664 tcccatagctcttcatccaatcccataataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 814763  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  814764 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 814820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 850093 - 849937
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||| ||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  850093 tcccatagctcttcatccaatcccataataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 849994  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  849993 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 849937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 19138432 - 19138590
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| || ||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19138432 atgtcccatagctcttcatccaatcccatgata-agttgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 19138530  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  19138531 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 19138590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 30315846 - 30315687
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  30315846 atgtcccatagcttttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctgaatctccattaaactttggagcttttc 30315747  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  30315746 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 30315687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 6160192 - 6160348
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| | |||||||||| ||||||||||| |||||||||||||||||||    
T  6160192 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccataaaaactcttccggatctccattaaactttggagcttttccag 6160291  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  6160292 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 6160348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 15781832 - 15781673
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||| ||||||| ||||    
T  15781832 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaaccttggagcctttc 15781733  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  15781732 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 15781673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 26120062 - 26120221
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  26120062 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaaccttggagcttttc 26120161  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||| | |||||||||| ||| |||||| |  ||||||||||||    
T  26120162 cagagtctgttttcttgtcaacagtatcatagtcatgcttgacacttgtgtattttgtag 26120221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 19428074 - 19428235
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19428074 atgtcccatagctcttcatccaaacccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 19428173  T
Q  154 cagaatctgattttctgtcagctgtatc--atagttatgtttgacattgttgtattttgtag 213  Q
    |||| | || |||  ||||||| |||||  ||||| |||||||||| |  ||||||||||||    
T  19428174 cagagtttgttttcttgtcagcagtatcatatagtcatgtttgacacttgtgtattttgtag 19428235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 21297867 - 21298000
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| | ||| ||||||||||||||||| |||||||||||||||||||||||||  ||||||||||| | ||||||||||||||||||    
T  21297867 cttcaagaatatcccacaactcatcatccaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttcagaatctccattgaactttgg 21297966  T
Q  146 agcttttccagaatctgattttctgtcagctgta 179  Q
    |||||||||||||||||||||  | |||||||||    
T  21297967 agcttttccagaatctgatttcttatcagctgta 21298000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 210
Target Start/End: Original strand, 44490866 - 44491022
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  44490866 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 44490965  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  44490966 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 44491022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 45569162 - 45569042
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||  ||||||||||| ||| |||||||||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  45569162 cttcaagaatatcccacagctcatcatttaatcccatgatgtagttgtacatgttggttttccaccaagaaaactcttcaggatctccattgaactttgg 45569063  T
Q  146 agcttttccagaatctgattt 166  Q
    |||||||||||||||||||||    
T  45569062 agcttttccagaatctgattt 45569042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 46 - 184
Target Start/End: Original strand, 23792376 - 23792514
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| || || || |||||||| || |||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  23792376 cttcaagaatatcacaaagatcttcatctaaacccatgatgtagatgtacatgttggttttccaccaagaaaactcttctggatctccattgaacattgg 23792475  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcata 184  Q
    |||||||| | ||||||||||  |||||| |||| ||||    
T  23792476 agcttttcaaaaatctgatttcttgtcagatgtaccata 23792514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 19942163 - 19942274
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| ||||||||||| |||||||| ||  |||||| |||| |||| | ||||||||||||||  ||||| | ||| ||||||||||||||||||||    
T  19942163 cttcaagtatgtcccatagttcttcatctaaatccatgacatagttgtagaagttggttttccaccaagaaaattattcaggatctccattgaactttgg 19942262  T
Q  146 agcttttccaga 157  Q
    | ||||||||||    
T  19942263 aacttttccaga 19942274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 24834369 - 24834268
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| || ||||||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||||||||||||| ||||||    
T  24834369 atgtcccataactcttcatctaaacccatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattgaactttggaacttttc 24834270  T
Q  154 ca 155  Q
    ||    
T  24834269 ca 24834268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 22672711 - 22672812
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||| || || ||||||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||||||||||| | ||||||    
T  22672711 atgtcccatagctcttcgtctaaacccatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattgaactttgaaacttttc 22672810  T
Q  154 ca 155  Q
    ||    
T  22672811 ca 22672812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 17287372 - 17287271
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||||||||||||||||| ||||||    
T  17287372 atgtcccatagatcttcatctaaacccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatctccattgaactttggaacttttc 17287273  T
Q  154 ca 155  Q
    ||    
T  17287272 ca 17287271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 17015502 - 17015614
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| ||||||   ||||| | ||| ||||||||||||||||||| | ||||||    
T  17015502 atgtcccatagttcttcatctaaacccatgacatgactatagaagttggtcttccactaggaaaatttttcaggatctccattgaactttgaaacttttc 17015601  T
Q  154 cagaatctgattt 166  Q
    |||| || |||||    
T  17015602 cagagtcggattt 17015614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 17541699 - 17541587
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| ||||||   ||||| | ||| ||||||||||||||||||| | ||||||    
T  17541699 atgtcccatagttcttcatctaaacccatgacatgactatagaagttggtcttccactaggaaaatttttcaggatctccattgaactttgaaacttttc 17541600  T
Q  154 cagaatctgattt 166  Q
    |||| || |||||    
T  17541599 cagagtcggattt 17541587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 18676651 - 18676708
Alignment:
Q  98 gttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttcca 155  Q
    |||||| |||||||  ||||| ||||| |||||| |||||||||||||| ||||||||    
T  18676651 gttggtcttccaccaggaaaattcttcaggatcttcattgaactttggaacttttcca 18676708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 46 - 230
Target Start/End: Complemental strand, 57920 - 57736
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  57920 cttcaagaatgtcccatagctcttcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttgg 57821  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 230  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||||||||||||||| ||||||||    
T  57820 agcttttccagaatctgatttcctgtcagcagtatcatagtcatgtttgacactattgtattttgtagatgtagtgtattcatct 57736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 8e-79; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 46 - 230
Target Start/End: Original strand, 22307890 - 22308074
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  22307890 cttcaagaatgtcccatagctcttcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctagatctccattgaactttgg 22307989  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 230  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||||||||| | ||||||||| ||||||||||||||||||||    
T  22307990 agcttttccagaatctgatttcctgtcagcagtatcatagtcatgtttgacactattgtattttatagatgtagtggattcatct 22308074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 3671152 - 3671308
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  3671152 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 3671251  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  3671252 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 3671308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 25985185 - 25985341
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  25985185 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 25985284  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  25985285 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 25985341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 34808255 - 34808099
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  34808255 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 34808156  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  34808155 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 34808099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 12864636 - 12864795
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  12864636 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 12864735  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  12864736 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 12864795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 20031017 - 20030858
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| | |||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  20031017 atgtcccatagctcttcatccaatcccatgataaaactgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 20030918  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| |||||||||  |  ||||||||||||    
T  20030917 cagagtctgttttcttgtcagcagtatcatagtcatgtttgacgcttgtgtattttgtag 20030858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 26874507 - 26874666
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  26874507 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 26874606  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  26874607 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 26874666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 32963042 - 32962883
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  32963042 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 32962943  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  32962942 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 32962883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 47 - 184
Target Start/End: Complemental strand, 17609562 - 17609425
Alignment:
Q  47 ttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgga 146  Q
    ||||||||| ||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  17609562 ttcaagaatatcccacagctcctcatccaatcccatgatgtagttgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgga 17609463  T
Q  147 gcttttccagaatctgattttctgtcagctgtatcata 184  Q
    ||||||||||||||||||||  | ||||||||| ||||    
T  17609462 gcttttccagaatctgatttcttatcagctgtaccata 17609425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 26035128 - 26035281
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  26035128 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 26035227  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  26035228 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 26035281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 9113589 - 9113446
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||| ||| |||||||||||||||||||||||| ||||||||||||||||    
T  9113589 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttctaccatgaaaactcttctggatctccattaaactttggagcttttc 9113490  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgaca 197  Q
    |||| |||| |||  ||||||| |||||||||| ||| ||||||    
T  9113489 cagagtctgttttcttgtcagcagtatcatagtcatgcttgaca 9113446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 12717929 - 12717776
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  12717929 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 12717830  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  |||||||  ||||||||| ||| |||||| |  |||||||||    
T  12717829 agtctgttttcttgtcagcaatatcatagtcatgcttgacacttgtgtattttg 12717776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 60 - 213
Target Start/End: Original strand, 16958719 - 16958872
Alignment:
Q  60 catagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaat 159  Q
    ||||||||||||||||||||||||||| || ||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |    
T  16958719 catagctcttcatccaatcccatgataaagttgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccagagt 16958818  T
Q  160 ctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    ||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  16958819 ctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 16958872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 231
Target Start/End: Original strand, 6157251 - 6157424
Alignment:
Q  58 cccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccaga 157  Q
    ||||||||||||||||||| ||||||||| |||| ||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||| |||||    
T  6157251 cccatagctcttcatccaaacccatgataaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagctttaccaga 6157350  T
Q  158 atctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
     |||| |||  |||||||  ||||||||| |||||||||| |  ||||||||  ||||||||| ||||| ||||    
T  6157351 gtctgttttcttgtcagcattatcatagtcatgtttgacacttgtgtattttaaagatgtagttgattcctctc 6157424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 11205061 - 11205234
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| | ||| ||||| ||||| ||||||||||| ||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  11205061 cttcaagaatattccacagctcctcatctaatcccatgatgtagctatacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 11205160  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtag 219  Q
    |||||||||||||| ||||||  |||||| |||| |||| | || ||| | |||  ||||| ||||||||||||    
T  11205161 agcttttccagaatttgatttcttgtcagttgtaccataatcattttttatattagtgtatcttgtagatgtag 11205234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 25725606 - 25725433
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||||||||| ||||| ||||| ||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||    
T  25725606 cttcaagaatatcccacagctcttcatctaatcctatgatgtagctgtacatattggttttcaaccaagaaaactcttctggatctccattgaactttgg 25725507  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtag 219  Q
    |||||||||||||||||||||  ||||||  ||| |||| | ||  ||||||||  ||||  ||||||||||||    
T  25725506 agcttttccagaatctgatttcttgtcagacgtaccataatcatagttgacattagtgtaccttgtagatgtag 25725433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 46 - 227
Target Start/End: Original strand, 18554386 - 18554567
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  18554386 cttcaagaatatcccacagctcctcatctaatcccatgatgtagttgtacatgttggttttccaccaagaaaactcttctggatctccattgaacattgg 18554485  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 227  Q
    |||||||| | ||||||||||  |||||| |||| |||| | ||| || |||||  ||||  ||||| |||||| |||||||    
T  18554486 agcttttcaaaaatctgatttcttgtcagatgtaccataatcatgattaacattagtgtaccttgtacatgtagaggattca 18554567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 28252664 - 28252521
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||| ||||||||  |||| ||||| || |||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  28252664 atgtcccatagctcttcatccaaacccatgatgaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttaggagcttttc 28252565  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgaca 197  Q
    |||| |||| |||  ||||||| |||||||||| ||| ||||||    
T  28252564 cagagtctgttttcttgtcagccgtatcatagtcatgcttgaca 28252521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 27412190 - 27412332
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  27412190 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 27412289  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  27412290 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 27412332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 27505033 - 27505177
Alignment:
Q  54 atgtcccatagctcttcatccaatccc-atgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagctttt 152  Q
    |||| |||||||||||||||||| ||| |||||| |||| ||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||     
T  27505033 atgtaccatagctcttcatccaaaccccatgataaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttta 27505132  T
Q  153 ccagaatctgattttctgtcagctgtatcatagttatgtttgaca 197  Q
    ||||| |||| |||  ||||||| |||||||||| ||||||||||    
T  27505133 ccagagtctgttttcttgtcagcagtatcatagtcatgtttgaca 27505177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 32302142 - 32301986
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  32302142 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 32302043  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    |||| |||| |||  ||||||| || ||||||| ||| |||||| |  |||||||||    
T  32302042 cagagtctgttttcttgtcagcagtgtcatagtcatgcttgacacttgtgtattttg 32301986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 27503409 - 27503552
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||| ||||||||  |||| ||||| || |||||||||| |||||||||||||||||||||||| ||||| |||||||| |    
T  27503409 atgtcccatagctcttcatccaaacccatgatgaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttaggagctttac 27503508  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgaca 197  Q
    |||| |||| |||  ||||||| |||||||||| ||| ||||||    
T  27503509 cagagtctgttttcttgtcagccgtatcatagtcatgcttgaca 27503552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 227
Target Start/End: Original strand, 17063318 - 17063499
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||||||||| ||||||||||| |||| |||| | ||| ||||||| || ||||| ||||  ||||||||||||||||||||||| ||||||||    
T  17063318 cttcaagaatgtcccacagctcttcatctaatctcatgttgtagttgtacatatttgtttttcaccaagaaaactcttctggatctccattaaactttgg 17063417  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 227  Q
    |||||||||| | |||| |||  | ||||| || |||||||||||    ||| |  ||||| ||||||||||||||||||||    
T  17063418 agcttttccaaactctgttttcttttcagcagtgtcatagttatgaccaacacttgtgtatcttgtagatgtagtggattca 17063499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 22385705 - 22385829
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccct----gaaaactcttctggatctccattgaact 141  Q
    |||||||||| ||||| || || ||||||||||||||||| |||||||||||||||||||||||| |     ||||||||||| ||||||||||||||||    
T  22385705 cttcaagaatatcccacagttcatcatccaatcccatgatgtagctgtacatgttggttttccacgcaccaagaaaactcttcaggatctccattgaact 22385804  T
Q  142 ttggagcttttccagaatctgattt 166  Q
    || || |||||||||||||||||||    
T  22385805 tttgaacttttccagaatctgattt 22385829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 157
Target Start/End: Original strand, 26043301 - 26043404
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||| || ||||||||||  || ||||||||||||||||||||||| |||||||||||||    
T  26043301 atgtcccatagctcttcatccaaacccatgataaagctatacatatttgttttccaccaagagaactcttctggatctccattgaattttggagcttttc 26043400  T
Q  154 caga 157  Q
    ||||    
T  26043401 caga 26043404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 21127211 - 21127308
Alignment:
Q  130 ctccattgaactttggagcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 227  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||| ||| |||||| ||||   |||||  ||||| ||||||||||| ||||||||    
T  21127211 ctccattgaacttttgagcttttccagaatctgatttcttgtcagcagtaccatagtcatgtccaacattagtgtatcttgtagatgtactggattca 21127308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 14054584 - 14054483
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||| || |||||| ||||||    
T  14054584 atgtcccatagttcttcatctaaacccatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattaaattttggaacttttc 14054485  T
Q  154 ca 155  Q
    ||    
T  14054484 ca 14054483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 107
Target Start/End: Complemental strand, 17609698 - 17609637
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttc 107  Q
    |||||||||| ||||| ||||| ||||||||||||||||| ||| |||||||||||||||||    
T  17609698 cttcaagaatatcccacagctcctcatccaatcccatgatgtagttgtacatgttggttttc 17609637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 18434454 - 18434555
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| |||||  |||||||||||||||||||| ||||||    
T  18434454 atgtcccatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcaagatctccattgaactttggaacttttc 18434553  T
Q  154 ca 155  Q
    ||    
T  18434554 ca 18434555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 157
Target Start/End: Original strand, 19469555 - 19469658
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||| ||||| ||||||||||| ||||||| ||   | || | ||||||||||||||  || || ||||| ||||||||||| ||||||||| |||| |    
T  19469555 atgtctcatagttcttcatccaaacccatgacatgattataaaagttggttttccaccaagagaattcttcaggatctccattaaactttggaactttac 19469654  T
Q  154 caga 157  Q
    ||||    
T  19469655 caga 19469658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 13434875 - 13434932
Alignment:
Q  98 gttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttcca 155  Q
    |||||| |||||||  ||||| ||||  ||||||||||||||||||||| ||||||||    
T  13434875 gttggtcttccaccaggaaaattctttaggatctccattgaactttggaacttttcca 13434932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 17446860 - 17446759
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| || || ||||| || |||||||| |  || ||||| |||||||||||||  || || ||||| ||||||||||| ||| ||||    
T  17446860 cttcaagaatatcccaaagttcatcatctaaacccatgatgtgactatacatcttggttttccaccaagagaattcttcaggatctccattaaaccttgg 17446761  T
Q  146 ag 147  Q
    ||    
T  17446760 ag 17446759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 46 - 230
Target Start/End: Complemental strand, 17282529 - 17282345
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  17282529 cttcaagaatgtcccataactcttcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttga 17282430  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 230  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||||||||| | |||||||||||| |||||||||||||||||    
T  17282429 agcttttccagaatctgatttcctgtcagcagtatcatagtcatgtttgacactattgtattttgtaaatgtagtggattcatct 17282345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 46 - 226
Target Start/End: Complemental strand, 8741236 - 8741056
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8741236 cttcaagaatatcccatagctcttcatccaatcccatgatgtagctttacatgttggttttccaccatgaaaactcttctggatctccattgaactttgg 8741137  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattc 226  Q
    ||||||||||||||||||||| || |||||||||||||||| |||||||||| | |||||||||||||||||||| |||||    
T  8741136 agcttttccagaatctgatttcctttcagctgtatcatagtcatgtttgacactattgtattttgtagatgtagtagattc 8741056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 46 - 230
Target Start/End: Original strand, 1063278 - 1063460
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1063278 cttcaagaatgtcccatagctcctcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttgg 1063377  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 230  Q
    ||||||||||||||||||||| |||||||| |||||||||| ||||||||||   ||||||||||| |||||| |||||||||||    
T  1063378 agcttttccagaatctgatttcctgtcagcagtatcatagtcatgtttgaca--cttgtattttgttgatgtaatggattcatct 1063460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 4432900 - 4433085
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  4432900 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctgggtctccattgaactttgg 4432999  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||| | ||||||||| |||| ||||| ||||| ||||    
T  4433000 agcttttccagaatctgattttctttcagcagtatcatagtcatgtttgacactattgtattttatagaagtagttgattcctctc 4433085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 13262767 - 13262582
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  13262767 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 13262668  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    ||||||| ||||||||||||| || ||||| ||||| |||| |||||||||| | |||||||||||||||||||| ||||| ||||    
T  13262667 agcttttacagaatctgatttcctttcagcagtatcgtagtcatgtttgacactattgtattttgtagatgtagttgattcctctc 13262582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 1785171 - 1784986
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  1785171 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 1785072  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    |||||||||||||| |||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  1785071 agcttttccagaatttgatttcctttcagcagtatcatagtcatgtttgacactagtgtattttaaggatgtagttgattcctctc 1784986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 7795715 - 7795530
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  7795715 cttcaagtatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 7795616  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  7795615 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 7795530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 9381758 - 9381573
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  9381758 cttcaagtatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 9381659  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  9381658 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 9381573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 11207189 - 11207004
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  11207189 cttcaagaatatcccatagttcttcatccaatcccatgatatagctatacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 11207090  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  11207089 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacactagtgtattttaaggatgtagttgattcctctc 11207004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 46 - 210
Target Start/End: Complemental strand, 8997045 - 8996881
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  8997045 cttcaagaatatcccatagctcctcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccactgaactttgg 8996946  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    |||||||||||||||||||||  ||||||| |||||||  | |||||||||| | ||||||||||    
T  8996945 agcttttccagaatctgatttcttgtcagcagtatcattctcatgtttgacactattgtattttg 8996881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 20674280 - 20674124
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  20674280 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 20674181  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| |||||||||| |  ||||||||||||    
T  20674180 agtctgttttcttgtcagcagtatcatagtcatgtttgacacttgtgtattttgtag 20674124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 37884730 - 37884889
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  37884730 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 37884829  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  37884830 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 37884889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 46 - 227
Target Start/End: Original strand, 17016918 - 17017099
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  17016918 cttcaagaatatcccacagctcctcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 17017017  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 227  Q
    |||||||||||||||||||||  | ||||| ||| |||| | ||||   |||||  ||||| ||||||||||| ||||||||    
T  17017018 agcttttccagaatctgatttcttatcagcagtaccataatcatgtccaacattagtgtatcttgtagatgtactggattca 17017099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 505253 - 505097
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  505253 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 505154  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  505153 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 505097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 4753473 - 4753629
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  4753473 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 4753572  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  4753573 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 4753629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 5538104 - 5537948
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  5538104 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 5538005  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  5538004 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 5537948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 5580716 - 5580560
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  5580716 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 5580617  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  5580616 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 5580560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 8784417 - 8784573
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  8784417 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 8784516  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  8784517 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 8784573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 12288063 - 12287907
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  12288063 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 12287964  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  12287963 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 12287907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 14475375 - 14475531
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  14475375 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 14475474  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  14475475 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 14475531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 16392131 - 16391975
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  16392131 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 16392032  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  16392031 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 16391975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 38204406 - 38204562
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  38204406 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 38204505  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  38204506 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 38204562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 19788173 - 19788332
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19788173 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 19788272  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  19788273 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 19788332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 23767045 - 23767204
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  23767045 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 23767144  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  23767145 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 23767204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 5866779 - 5866626
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  5866779 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 5866680  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  5866679 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 5866626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 11273468 - 11273315
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  11273468 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 11273369  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  11273368 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 11273315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 24384601 - 24384448
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  24384601 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 24384502  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  24384501 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 24384448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 24669624 - 24669777
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  24669624 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 24669723  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  24669724 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 24669777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 5520022 - 5520178
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||| ||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  5520022 tcccatagctcttcatccaatcccataataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 5520121  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  5520122 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 5520178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 15848037 - 15848157
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  15848037 cttcaagaatatcccacagctcctcatccaatcccatgatgtagttgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 15848136  T
Q  146 agcttttccagaatctgattt 166  Q
    |||||||||||||||||||||    
T  15848137 agcttttccagaatctgattt 15848157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 57 - 231
Target Start/End: Complemental strand, 12238700 - 12238526
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||| ||||| || |||||||||| ||||||||||||||| |||||||| |||||||||||||| ||||    
T  12238700 tcccatagctcttcatccaatcccatgataaagctatacatatttgttttccaccatgaaaactcttctgggtctccattaaactttggagctttaccag 12238601  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    | |||| |||  ||||||| |||||||||| |||||||||| |  |||||||| | |||||||| ||||| ||||    
T  12238600 agtctgttttcttgtcagccgtatcatagtcatgtttgacacttgtgtattttatggatgtagttgattcctctc 12238526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 15652203 - 15652029
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccct-gaaaactcttctggatctccattgaactttg 144  Q
    |||||||||| ||||| || |||||||| ||||||||||| |||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  15652203 cttcaagaatatcccacagttcttcatctaatcccatgatgtagctgtacatgttggttttccacacaagaaaactcttctggatctccattgaactttg 15652104  T
Q  145 gagcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtag 219  Q
    ||||||||||||| ||||||||  |||||| |||| |||||| ||| || ||||| |||||  | ||||||||||    
T  15652103 gagcttttccagagtctgatttcttgtcagatgtaccatagtcatgattaacattattgtacctagtagatgtag 15652029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 12753879 - 12753759
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  12753879 cttcaagaatatcccacagctcatcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggatcttcattgaactttgg 12753780  T
Q  146 agcttttccagaatctgattt 166  Q
    |||||||||||||||||||||    
T  12753779 agcttttccagaatctgattt 12753759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 231
Target Start/End: Complemental strand, 9982971 - 9982797
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||| ||||| || |||||||||| ||||||||||||||| |||||||| |||||||||||||| ||||    
T  9982971 tcccatagctcttcatccaatcccatgataaagctatacatatttgttttccaccatgaaaactcttctgggtctccattaaactttggagctttaccag 9982872  T
Q  157 aatctgattttct-gtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    | |||| |||||| |||||| |||||||||| |||||||||| |  |||||||| | |||||||| ||||| ||||    
T  9982871 agtctg-ttttctagtcagccgtatcatagtcatgtttgacacttgtgtattttatggatgtagttgattcctctc 9982797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 41693403 - 41693529
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  41693403 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 41693502  T
Q  157 aatctgattttctgtcagctgtatcat 183  Q
    | |||| |||  ||||||| |||||||    
T  41693503 agtctgttttcttgtcagcagtatcat 41693529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 29934657 - 29934537
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||| | |||||||||||||||    
T  29934657 cttcaagaatatcccacagctcttcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggttttccattgaactttgg 29934558  T
Q  146 agcttttccagaatctgattt 166  Q
    ||||||||||||||| |||||    
T  29934557 agcttttccagaatcagattt 29934537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 29983811 - 29983691
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||| | |||||||||||||||    
T  29983811 cttcaagaatatcccacagctcttcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggttttccattgaactttgg 29983712  T
Q  146 agcttttccagaatctgattt 166  Q
    ||||||||||||||| |||||    
T  29983711 agcttttccagaatcagattt 29983691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 6491432 - 6491273
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| || ||||||| || |||||||||| ||| |||||||||||||||||||| ||| ||||||||||||    
T  6491432 atgtcccataactcttcatccaatcccatgataaagttgtacatattagttttccaccatgagaactcttctggatctccattaaaccttggagcttttc 6491333  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  6491332 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 6491273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 13373754 - 13373595
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||  |||||||||| ||| ||||||||||||    
T  13373754 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttccagatctccattaaaccttggagcttttc 13373655  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  13373654 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 13373595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 13384348 - 13384189
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||  |||||||||| ||| ||||||||||||    
T  13384348 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttccagatctccattaaaccttggagcttttc 13384249  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  13384248 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 13384189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 29462304 - 29462145
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||| || |||||||||| ||||||||||||||| |||||||| ||||| |||||||| |    
T  29462304 atgtcccatagctcttcatccaaacccatgataaagctatacatatttgttttccaccatgaaaactcttctgggtctccattaaacttaggagctttac 29462205  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| |||||||||| |  ||||||||||||    
T  29462204 cagagtctgttttcttgtcagcagtatcatagtcatgtttgacacttgtgtattttgtag 29462145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 10628034 - 10627877
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||| || |||||||||| |||||||||||||||||||||||| ||||| |||||||| |    
T  10628034 atgtcccatagctcttcatccaaacccatgataaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttaggagctttac 10627935  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgt 211  Q
    |||| |||| |||  ||||||| |||||||| | |||||||||| |  ||||||||||    
T  10627934 cagagtctgttttcttgtcagcagtatcataatcatgtttgacacttgtgtattttgt 10627877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 47541929 - 47542029
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||    
T  47541929 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctgggtctccattgaactttgg 47542028  T
Q  146 a 146  Q
    |    
T  47542029 a 47542029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 28315324 - 28315182
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  28315324 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 28315225  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  28315224 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 28315182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 13147180 - 13147301
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatccc-atgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttg 144  Q
    |||||||||| ||||| ||||| ||||| | |||| ||||| |||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  13147180 cttcaagaatatcccacagctcctcatctagtccccatgatgtagctgtacatgttggtttttcaccaagaaaactcttctggatctccattgaactttg 13147279  T
Q  145 gagcttttccagaatctgattt 166  Q
    ||||||||||||||||||||||    
T  13147280 gagcttttccagaatctgattt 13147301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 16397104 - 16396961
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||| || |||||||||| |||||||||||||||||||||||| |||||  ||||||| |    
T  16397104 atgtcccatagctcttcatccaaacccatgataaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttaagagctttac 16397005  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgaca 197  Q
    |||| |||| |||  ||||||| |||||||| | ||||||||||    
T  16397004 cagagtctgttttcttgtcagcagtatcataatcatgtttgaca 16396961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 39381835 - 39381977
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| || ||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  39381835 atgtcccataactcttcatctaatcccatgataaagttgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 39381934  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  39381935 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 39381977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 48 - 136
Target Start/End: Complemental strand, 14312504 - 14312416
Alignment:
Q  48 tcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccatt 136  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  14312504 tcaagaatgtcccatagttcttcatccaaacccatgataaagctgtacatattggttttccaccatgaaaactcttctggatctccatt 14312416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 5211357 - 5211458
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||| |  |||| ||  ||||| | |||||||||||||   ||||| ||||| |||||||| |||||||||||| ||||||    
T  5211357 atgtcccatagctcttcatccaaacaaatgacatgactgtagaagttggttttccacaaggaaaattcttcaggatctccgttgaactttggaacttttc 5211456  T
Q  154 ca 155  Q
    ||    
T  5211457 ca 5211458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 157
Target Start/End: Original strand, 16031443 - 16031547
Alignment:
Q  53 aatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagctttt 152  Q
    |||||||||||| |||||||| || || ||||  |||||||| | ||||||||||||||  || || ||||| ||||||||||||||||| ||| ||||     
T  16031443 aatgtcccatagttcttcatctaaaccaatgacctagctgtagaagttggttttccaccaagagaattcttcaggatctccattgaacttaggaacttta 16031542  T
Q  153 ccaga 157  Q
    |||||    
T  16031543 ccaga 16031547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 2560133 - 2560234
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||| ||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||||||||||||||||| ||||||    
T  2560133 atgtctcatagttcttcatctaagcccatgacatgactataaaagttggtcttccaccaggaaaattcttcaggatctccattgaactttggaacttttc 2560232  T
Q  154 ca 155  Q
    ||    
T  2560233 ca 2560234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 151
Target Start/End: Complemental strand, 15960556 - 15960451
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| || ||||| || |||||||| |  || ||||| |||||||||||||  ||||| |||||  ||| |||||| ||||||||    
T  15960556 cttcaagaatatcccatagttcatcatctaaacccatgatgtgactatacatattggttttccaccaggaaaattcttcaagatttccattaaactttgg 15960457  T
Q  146 agcttt 151  Q
    ||||||    
T  15960456 agcttt 15960451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 53057933 - 53057832
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| | |||||| || ||||||| ||  ||||| | |||||| |||||||  ||||| ||| | ||||||||||||||||||||| ||||||    
T  53057933 atgtcccatagtttttcatctaagcccatgacatgactgtagaagttggtcttccaccaggaaaattctacaggatctccattgaactttggaacttttc 53057834  T
Q  154 ca 155  Q
    ||    
T  53057833 ca 53057832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 6183052 - 6183009
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacat 97  Q
    |||||||||| |||||||||||||||||||||| ||||||||||    
T  6183052 atgtcccataactcttcatccaatcccatgataaagctgtacat 6183009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 11188942 - 11189043
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||| |||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||||||||||||||||| || |||    
T  11188942 atgtcctatagttcttcatctaaacccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatctccattgaactttggaactcttc 11189041  T
Q  154 ca 155  Q
    ||    
T  11189042 ca 11189043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 111
Target Start/End: Complemental strand, 12410926 - 12410861
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccacc 111  Q
    ||||||| || |||||||  |||||||| |||||||||||||| || ||||| |||||||||||||    
T  12410926 cttcaaggatatcccataattcttcatctaatcccatgatataactatacattttggttttccacc 12410861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 21639788 - 21639889
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||||||||||||| || ||||||| ||  || || | || |||||||||||| ||||| | |||  |||||||||| ||||| ||| ||||||    
T  21639788 atgtcccatagctcttcatctaaacccatgacatgactatagaagtgggttttccacccggaaaatttttcaagatctccattaaacttaggaacttttc 21639887  T
Q  154 ca 155  Q
    ||    
T  21639888 ca 21639889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 19886298 - 19886186
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || | ||||| ||  || || | |||||| |||||||  ||||| ||| | ||||||||||| ||||||||| ||||||    
T  19886298 atgtcccatagttcttcatctaaactcatgacatgactatagaagttggtattccaccaggaaaattctccaggatctccattaaactttggaacttttc 19886199  T
Q  154 cagaatctgattt 166  Q
    |||| || |||||    
T  19886198 cagagtcagattt 19886186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 153
Target Start/End: Complemental strand, 14078555 - 14078448
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||  || ||||  ||||| ||||| |  || ||||| |||||||||||||  ||||| ||||| |||| |||||| ||| ||||    
T  14078555 cttcaagaatatcccataattcatcatttaatccgatgatgtgactatacatattggttttccaccaggaaaattcttcaggatttccattaaaccttgg 14078456  T
Q  146 agcttttc 153  Q
    ||||||||    
T  14078455 agcttttc 14078448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 11221742 - 11221840
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttcca 155  Q
    |||||||  |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| | ||||||||||||||||||| ||||||||    
T  11221742 tcccataattcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcagcatctccattgaactttggaacttttcca 11221840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 11222493 - 11222594
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||  |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| | ||||||||||||||||| | ||||||    
T  11222493 atgtcccataattcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcagcatctccattgaactttgaaacttttc 11222592  T
Q  154 ca 155  Q
    ||    
T  11222593 ca 11222594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 17240090 - 17240038
Alignment:
Q  114 gaaaactcttctggatctccattgaactttggagcttttccagaatctgattt 166  Q
    ||||| ||||| ||||||||||| ||||||||| |||||||||| || |||||    
T  17240090 gaaaattcttcaggatctccattaaactttggaacttttccagagtcagattt 17240038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 46 - 230
Target Start/End: Original strand, 18440320 - 18440504
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  18440320 cttcaagaatgtcccatagttcttcatccaatcccatgatgtagttgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttgg 18440419  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 230  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| | ||||||||||| ||||||||||||||||||    
T  18440420 agcttttccagaatctgatttcctatcagcagtatcatagtcatgtttgacactattgtattttgtggatgtagtggattcatct 18440504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 9169306 - 9169491
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  9169306 cttcaagtatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 9169405  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  9169406 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 9169491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 4221744 - 4221900
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  4221744 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 4221843  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  4221844 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 4221900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 8003233 - 8003077
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  8003233 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 8003134  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  8003133 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 8003077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 9094123 - 9094279
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  9094123 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 9094222  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  9094223 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 9094279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 40043271 - 40043115
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  40043271 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 40043172  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  40043171 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 40043115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 42875584 - 42875740
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  42875584 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 42875683  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  42875684 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 42875740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 176623 - 176782
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  176623 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 176722  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  176723 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 176782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 458156 - 457997
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  458156 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 458057  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  458056 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 457997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 2706791 - 2706624
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||| ||||||||||||| |||||||||||||||||||||| |||||||||| || || ||||||| |||||||||||||||||||||||| ||||||||    
T  2706791 cttccagaatgtcccataactcttcatccaatcccatgataaagctgtacatatttgtcttccaccatgaaaactcttctggatctccattaaactttgg 2706692  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||||||||||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  2706691 agcttttccagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 2706624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 17951284 - 17951125
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  17951284 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 17951185  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  17951184 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 17951125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 20988790 - 20988949
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  20988790 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 20988889  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||| | |||||||||| ||| |||||| |  ||||||||||||    
T  20988890 cagagtctgttttcttgtcaacagtatcatagtcatgcttgacacttgtgtattttgtag 20988949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 24743837 - 24743990
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  24743837 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 24743936  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  24743937 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 24743990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 26391261 - 26391108
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  26391261 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 26391162  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  26391161 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 26391108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 1997292 - 1997448
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    ||||||||||||||||||||| |||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  1997292 tcccatagctcttcatccaattccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 1997391  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  1997392 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 1997448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 6868397 - 6868241
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    ||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  6868397 tcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 6868298  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  6868297 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 6868241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 6879039 - 6878883
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    ||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  6879039 tcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 6878940  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  6878939 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 6878883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 26654503 - 26654347
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||| ||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  26654503 tcccatagctcttcatccaatcccataataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 26654404  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  26654403 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 26654347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 8627078 - 8627237
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||| ||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  8627078 atgtcccataactcttcatccaatctcatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 8627177  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  8627178 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 8627237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 22098874 - 22099033
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  22098874 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagtttttc 22098973  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  22098974 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 22099033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 13175772 - 13175591
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| ||| | |||||||||||||||||||  ||||||||||||||||||||||| ||||||||    
T  13175772 cttcaagaatatcccacagctcctcatctaatcccatgatgtagttatacatgttggttttccaccaagaaaactcttctggatctccattaaactttgg 13175673  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 227  Q
    ||||||||||||||||| |||  ||||||| ||| |||| | ||||   |||||  ||||| ||||||||||| | ||||||    
T  13175672 agcttttccagaatctgttttcttgtcagcagtaccataatcatgtccaacattagtgtatcttgtagatgtacttgattca 13175591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 210
Target Start/End: Original strand, 11014921 - 11015077
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  11014921 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 11015020  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  11015021 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 11015077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 11004312 - 11004454
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  11004312 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 11004411  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  11004412 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 11004454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 9442996 - 9443155
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||| |||||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  9442996 atgtcccagagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttatggatctccattaaactttggagcttttc 9443095  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    || | || | |||  ||||||| ||||| |||| ||| |||| | |  ||||||||||||    
T  9443096 caaagtcagttttcttgtcagcagtatcgtagtcatgcttgatacttgtgtattttgtag 9443155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 154
Target Start/End: Complemental strand, 15705708 - 15705614
Alignment:
Q  60 catagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttcc 154  Q
    ||||||||| |||| || ||||||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||||||||||||| |||||||    
T  15705708 catagctctccatctaaacccatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattgaactttggaacttttcc 15705614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 13879083 - 13879184
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||||||||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||  ||||||||||||||||||||| ||||||    
T  13879083 atgtcccatagctcttcatctaaacccatgaaatgactatagaagttggtcttccaccaggaaaattctttaggatctccattgaactttggaacttttc 13879182  T
Q  154 ca 155  Q
    ||    
T  13879183 ca 13879184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 15466703 - 15466815
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||| ||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||  ||||||||||||||||||||| ||||||    
T  15466703 atgtctcatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattctttaggatctccattgaactttggaacttttc 15466802  T
Q  154 cagaatctgattt 166  Q
    || |||| |||||    
T  15466803 cataatcagattt 15466815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 4413183 - 4413082
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || | ||||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||| ||||| ||| | ||||    
T  4413183 atgtcccatagttcttcatctaaactcatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattaaacttaggaacatttc 4413084  T
Q  154 ca 155  Q
    ||    
T  4413083 ca 4413082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 16311151 - 16311082
Alignment:
Q  98 gttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaatctgatttt 167  Q
    |||||| |||||||  ||||| ||||| ||||||||||| ||||||||| |||||||||| || ||||||    
T  16311151 gttggtcttccaccaggaaaattcttcaggatctccattaaactttggaacttttccagagtcagatttt 16311082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 16408741 - 16408861
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| |||||||| ||||| ||||  ||  ||||| |||  || ||||| || ||||||||||  ||||||||||| || | |||||| ||||||||    
T  16408741 cttcaagtatgtcccaaagctcatcatttaaatccatgttatgactatacatatttgttttccaccaagaaaactcttcagggtttccattaaactttgg 16408840  T
Q  146 agcttttccagaatctgattt 166  Q
    |||||| ||||| || |||||    
T  16408841 agctttgccagagtcggattt 16408861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 13028143 - 13028040
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| ||||||   ||||| ||||  ||||||||||| ||||||||| ||||||    
T  13028143 atgtcccatagttcttcatctaaacccatgacatgactatagaagttggtcttccactaggaaaattctttaggatctccattaaactttggaacttttc 13028044  T
Q  154 caga 157  Q
    ||||    
T  13028043 caga 13028040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 155
Target Start/End: Original strand, 27870655 - 27870749
Alignment:
Q  61 atagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttcca 155  Q
    |||| |||||||| || ||||||| ||  ||||| | ||||||||||||||   |||| ||||| ||||||||||| ||||| ||| ||||||||    
T  27870655 atagttcttcatctaaacccatgacatgactgtagaagttggttttccaccagaaaaattcttccggatctccattaaacttaggaacttttcca 27870749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 4e-65; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 28722432 - 28722247
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||     
T  28722432 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttga 28722333  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| | ||||||||| |||| ||||| ||||| ||||    
T  28722332 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacactattgtattttatagaagtagttgattcctctc 28722247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 26878774 - 26878959
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| ||||||||||||| |||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  26878774 cttcaagaatatcccatagttcttcatccaatctcatgatatagctgtacatattgattttccaccatgaaaactcttctggatctccattgaactttgg 26878873  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    ||||||||||||||||||||| || ||||  |||||||||| |||||||||| | ||||||||| |||||||||| ||||| ||||    
T  26878874 agcttttccagaatctgatttcctttcagtagtatcatagtcatgtttgacactattgtattttatagatgtagttgattcctctc 26878959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 24416140 - 24415955
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| || ||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  24416140 cttcaagaatatcccatagttcatcatctaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 24416041  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  24416040 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacactagtgtattttaaggatgtagttgattcctctc 24415955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 43092385 - 43092544
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  43092385 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 43092484  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  43092485 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 43092544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 24802765 - 24802627
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  24802765 cttcaagaatatcccacagctcctcatccaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 24802666  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcata 184  Q
    |||||||||||||||||||||  | ||||||||| ||||    
T  24802665 agcttttccagaatctgatttcttatcagctgtaacata 24802627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 10276696 - 10276852
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  10276696 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 10276795  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  10276796 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 10276852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 4219602 - 4219761
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  4219602 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 4219701  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  4219702 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 4219761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 9898679 - 9898520
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  9898679 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 9898580  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  9898579 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 9898520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 24328855 - 24328696
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  24328855 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 24328756  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  24328755 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 24328696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 29253926 - 29254085
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| || ||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  29253926 atgtcccatagctcttcatccaatcccatgataaagttgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 29254025  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  29254026 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 29254085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 11396275 - 11396122
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  11396275 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 11396176  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  11396175 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 11396122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 19303542 - 19303361
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| | ||| ||||| ||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||||||||| ||    
T  19303542 cttcaagaatatcccacaactcctcatctaatcccatgatatagttgtacatgttgattttccaccaagaaaactcttctggatctccattgaacttcgg 19303443  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 227  Q
    |||||||||||||||||||||  ||||||| ||  |||||| |||  | |||||  ||||| ||||||||||||||||||||    
T  19303442 agcttttccagaatctgatttcttgtcagcagtgccatagtcatgactaacattagtgtatcttgtagatgtagtggattca 19303361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 39171197 - 39171041
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||||||| |||||| |||||||||||||||||||    
T  39171197 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatatccattaaactttggagcttttccag 39171098  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  39171097 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 39171041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 43354139 - 43354295
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||| ||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  43354139 tcccatagctcttcatccaatcccataataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 43354238  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  43354239 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 43354295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 9763869 - 9763710
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||| ||||||||||||||| ||||||||||||||||    
T  9763869 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactgttctggatctccattaaactttggagcttttc 9763770  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  9763769 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 9763710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 40250315 - 40250474
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||| ||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  40250315 atgtcccataactcttcatccaatctcatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 40250414  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  40250415 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 40250474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 22915963 - 22915807
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||| | || ||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  22915963 tcccatagctcttcatccaatcccatgaaaaagttgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 22915864  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  22915863 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 22915807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 34791323 - 34791164
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||| |||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  34791323 atgtctcataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaaccttggagcttttc 34791224  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  34791223 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 34791164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 219
Target Start/End: Original strand, 22773470 - 22773643
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||||||||| ||||||||||| |||||||||||||| ||||| ||||  ||||||||||||||||||||||||||||||||    
T  22773470 cttcaagaatatcccacagctcttcatctaatcccatgatgtagctgtacatgttagtttttcaccaagaaaactcttctggatctccattgaactttgg 22773569  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtag 219  Q
    |||||||| ||||||||||||  ||||||  ||| |||| | ||   |||||||  ||||| ||||||||||||    
T  22773570 agcttttctagaatctgatttcttgtcagacgtaccataatcatagctgacattagtgtatcttgtagatgtag 22773643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 35262710 - 35262852
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  35262710 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 35262809  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  35262810 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 35262852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 35273335 - 35273477
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  35273335 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 35273434  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  35273435 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 35273477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 21163053 - 21162996
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccacc 111  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||    
T  21163053 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccacc 21162996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 151
Target Start/End: Original strand, 24843131 - 24843236
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||| ||||| ||||| || || ||||| ||||||||||| || || ||||| |||||||||||||  ||||| ||||| |||| ||||||||| |||||    
T  24843131 cttctagaatatcccacagttcatcatctaatcccatgatgtaactctacatattggttttccaccaagaaaattcttcaggatttccattgaattttgg 24843230  T
Q  146 agcttt 151  Q
    ||||||    
T  24843231 agcttt 24843236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 25828094 - 25828206
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||| ||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||||||||||||||| ||||||||| ||||||    
T  25828094 atgtctcatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttctggatctccattaaactttggaacttttc 25828193  T
Q  154 cagaatctgattt 166  Q
    |||| || |||||    
T  25828194 cagagtcagattt 25828206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 152
Target Start/End: Complemental strand, 22782783 - 22782685
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagctttt 152  Q
    |||||||||||||||||||| || ||||||| ||  || || | ||||||||||||||  ||||| |||||  |||||||||| ||||| ||| |||||    
T  22782783 atgtcccatagctcttcatctaaacccatgacatgactttagaagttggttttccaccaggaaaattcttcaagatctccattaaacttaggaactttt 22782685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 153
Target Start/End: Original strand, 22257134 - 22257233
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||| |||||||||| || ||||||    
T  22257134 atgtcccatagttcttcatctaaacccatgacatgactatagacgttggtcttccaccaggaaaattcttcaggatctctattgaactttagaacttttc 22257233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 20567201 - 20567259
Alignment:
Q  93 tacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttt 151  Q
    ||||| |||||||||||||  ||||| ||||| |||| |||||| ||||||||||||||    
T  20567201 tacatattggttttccaccacgaaaattcttcaggatttccattaaactttggagcttt 20567259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 75 - 230
Target Start/End: Complemental strand, 13226 - 13071
Alignment:
Q  75 aatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaatctgattttctgtcag 174  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13226 aatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttctggatctccattgaactttggagcttttccagaatctgatttcctgtcag 13127  T
Q  175 ctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatct 230  Q
    | |||||||||| |||||||||| | ||||||||||||||||||||| ||||||||    
T  13126 cagtatcatagtcatgtttgacactattgtattttgtagatgtagtgtattcatct 13071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 17456357 - 17456542
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| ||| |||||||||||||    
T  17456357 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttctaccatgaaaactcttctgggtctgcattgaactttgg 17456456  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    |||||||||||||||||||||||| ||||| |||||||||| |||||||||| | ||||||||| |||| ||||| ||||| ||||    
T  17456457 agcttttccagaatctgattttctttcagcagtatcatagtcatgtttgacactattgtattttatagaagtagttgattcctctc 17456542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 20553032 - 20552847
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||    
T  20553032 cttcaagaatatcccatagttctttatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaacttcgg 20552933  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    |||||||||||||||| |||| || ||||| |||||||||| |||||||||| | ||||||||| |||| ||||| ||||| ||||    
T  20552932 agcttttccagaatctcatttcctttcagcagtatcatagtcatgtttgacactattgtattttatagaagtagttgattcctctc 20552847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 21705008 - 21705193
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||||||||||||||||||| ||||||| || |||||||||| |||||||||||||||||||||||||||||||||    
T  21705008 cttcaagaatatcccatagttcttcatccaatcccatgatatagttgtacatatttgttttccaccatgaaaactcttctggatctccattgaactttgg 21705107  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  21705108 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacactagtgtattttaaggatgtagttgattcctctc 21705193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 46 - 231
Target Start/End: Original strand, 24982454 - 24982639
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  24982454 cttcaagtatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 24982553  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    |||||||||||| |||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  24982554 agcttttccagagtctgatttcctttcagcagtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 24982639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 34053177 - 34052992
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  34053177 cttcaagtatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaactttgg 34053078  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    |||||||||||||||||| || || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  34053077 agcttttccagaatctgacttcctttcagcagtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 34052992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 23393626 - 23393441
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||  |    
T  23393626 cttcaagaatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaatttcag 23393527  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    |||||||||||| |||||||| || |||| ||||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  23393526 agcttttccagagtctgatttcctttcagttgtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 23393441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 1120954 - 1121113
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  1120954 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 1121053  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  1121054 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 1121113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 27621824 - 27621983
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  27621824 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 27621923  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  27621924 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 27621983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 39353705 - 39353546
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  39353705 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 39353606  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  39353605 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 39353546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 43620946 - 43621105
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||| |||||||||    
T  43620946 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttagagcttttc 43621045  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    ||||||||| |||  |||||||  ||||||||| |||||||||| |  ||||||||||||    
T  43621046 cagaatctgttttcttgtcagcattatcatagtcatgtttgacacttgtgtattttgtag 43621105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 54 - 231
Target Start/End: Complemental strand, 19465181 - 19465004
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19465181 atgtcacatagctcttcatccaaacccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 19465082  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    |||| |||| |||  ||||||| |||||||||| || ||||||| |  ||||||||||||| ||||| ||||| ||||    
T  19465081 cagagtctgttttcttgtcagcagtatcatagtcatatttgacacttgtgtattttgtagaagtagttgattcctctc 19465004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 6977012 - 6976856
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  6977012 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 6976913  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  6976912 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 6976856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 9337160 - 9337004
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  9337160 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 9337061  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  9337060 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 9337004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 14031248 - 14031092
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  14031248 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 14031149  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  14031148 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 14031092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 22677322 - 22677166
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  22677322 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 22677223  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  22677222 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 22677166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 23297483 - 23297327
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  23297483 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 23297384  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  23297383 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 23297327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 23363316 - 23363160
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  23363316 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 23363217  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  23363216 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 23363160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 24568294 - 24568138
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  24568294 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 24568195  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  24568194 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 24568138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 24826530 - 24826686
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  24826530 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 24826629  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  24826630 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 24826686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 34773115 - 34772959
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  34773115 tcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 34773016  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  34773015 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 34772959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 35216709 - 35216553
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  35216709 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 35216610  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  35216609 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 35216553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 36592172 - 36592328
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  36592172 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 36592271  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  36592272 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 36592328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 37739622 - 37739778
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  37739622 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 37739721  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  37739722 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 37739778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 5300194 - 5300353
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  5300194 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttattttccaccatgaaaactcttctggatctccattaaactttggagcttttc 5300293  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  5300294 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacactagtgtattttgtag 5300353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 31834689 - 31834530
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  31834689 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 31834590  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  31834589 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 31834530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 40391567 - 40391408
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  40391567 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 40391468  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  40391467 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 40391408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 14456667 - 14456820
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  14456667 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 14456766  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  14456767 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 14456820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 14567708 - 14567861
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  14567708 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 14567807  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  14567808 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 14567861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 15741175 - 15741022
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  15741175 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 15741076  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  15741075 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 15741022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 16002948 - 16003107
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| || ||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  16002948 atgtcccataactcttcatccaatcccatgataaagttgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 16003047  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  16003048 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 16003107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 46 - 227
Target Start/End: Original strand, 23487478 - 23487659
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| |  |||||||||||| ||||||||||||||||||     
T  23487478 cttcaagaatatcccacagctcctcatctaatcccatgatgtagctgtacatgttggttttccagcaagaaaactcttctagatctccattgaactttga 23487577  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 227  Q
    |||||||||||||||||||||  ||||||| ||| |||| | ||||   |||||  ||||| ||||||||||| ||||||||    
T  23487578 agcttttccagaatctgatttcttgtcagcagtaccataatcatgtgcaacattagtgtatcttgtagatgtactggattca 23487659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 60 - 213
Target Start/End: Complemental strand, 24809119 - 24808966
Alignment:
Q  60 catagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaat 159  Q
    ||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |    
T  24809119 catagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccagagt 24809020  T
Q  160 ctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    ||| |||  ||||||| ||||||| || ||| |||||| |  ||||||||||||    
T  24809019 ctgttttcttgtcagcagtatcatcgtcatgcttgacacttgtgtattttgtag 24808966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 27461368 - 27461215
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    ||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  27461368 tcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 27461269  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  27461268 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 27461215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 22147725 - 22147566
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  22147725 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggaggttttc 22147626  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  |||||||  ||||||||| ||| |||||| |  ||||||||||||    
T  22147625 cagagtctgttttcttgtcagcaatatcatagtcatgcttgacacttgtgtattttgtag 22147566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 54 - 231
Target Start/End: Complemental strand, 31419874 - 31419697
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| |||| ||||| || |||||||||| |||||||||||||||||||||||| |||||| ||||||| |    
T  31419874 atgtcccatagctcttcatccaatcccatgataaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttttgagctttac 31419775  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
     ||| |||| |||  ||||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  31419774 tagagtctgttttcttgtcagccgtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 31419697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 17608271 - 17608115
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  17608271 atgtcccataactcttcatctaatcccatgataaagctgtacatattggttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 17608172  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  17608171 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 17608115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 25113115 - 25112995
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||    
T  25113115 cttcaagaatatcccacagctcatcatccaatcccatgatgtagctgtacatgttggttttccaccaagagaactcttcaggatctccattgaactttgg 25113016  T
Q  146 agcttttccagaatctgattt 166  Q
    |||||||||||| ||||||||    
T  25113015 agcttttccagagtctgattt 25112995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 25172206 - 25172086
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||  || |||||||| ||||||||||||||||||||    
T  25172206 cttcaagaatatcccacagctcatcatccaatcccatgatgtagctgtacatgttggttttccaccaagagaactcttcaggatctccattgaactttgg 25172107  T
Q  146 agcttttccagaatctgattt 166  Q
    |||||||||||| ||||||||    
T  25172106 agcttttccagagtctgattt 25172086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 46 - 181
Target Start/End: Complemental strand, 11209212 - 11209077
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| || || ||||||||||||||||| |||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||    
T  11209212 cttcaagaatatcccacagttcatcatccaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttcaggatctccattgaactttgg 11209113  T
Q  146 agcttttccagaatctgattttctgtcagctgtatc 181  Q
    |||||||| ||| ||||||||  |||||| ||||||    
T  11209112 agcttttctagagtctgatttcttgtcagttgtatc 11209077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 46 - 227
Target Start/End: Original strand, 13532912 - 13533093
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| || ||||| ||||| ||||| ||||||||||| ||| |||||||||||||||||||||  |||||||||||||||||||||||||| ||||     
T  13532912 cttcaaggatatcccacagctcctcatctaatcccatgatgtagttgtacatgttggttttccaccaagaaaactcttctggatctccattgaattttga 13533011  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 227  Q
    |||||||||||||||||||||  |||||| |||| |||| | |||     ||||  ||||| ||||||||||||||||||||    
T  13533012 agcttttccagaatctgatttcttgtcagatgtaccataatcatgaccagcattagtgtatcttgtagatgtagtggattca 13533093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 17720127 - 17719971
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  17720127 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 17720028  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  17720027 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 17719971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 31349743 - 31349587
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  31349743 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 31349644  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  31349643 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 31349587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 36688907 - 36688751
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  36688907 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 36688808  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  36688807 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 36688751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 23697989 - 23697847
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  23697989 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 23697890  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  23697889 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 23697847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 27051889 - 27052031
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  27051889 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 27051988  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  27051989 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 27052031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 30237078 - 30237220
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  30237078 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 30237177  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  30237178 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 30237220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 42043989 - 42043847
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  42043989 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 42043890  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  42043889 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 42043847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 39500542 - 39500635
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagctt 150  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||    
T  39500542 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagctt 39500635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 31144510 - 31144398
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||| ||||| ||| ||||||    
T  31144510 atgtcccatagttcttcatctaaacccatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattaaacttaggaacttttc 31144411  T
Q  154 cagaatctgattt 166  Q
    |||| || |||||    
T  31144410 cagagtcagattt 31144398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 26764402 - 26764503
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||||||||||||| || |  |||| ||  ||||| | ||||||||||||||  ||||| || || ||||||||||||||||||||| ||||||    
T  26764402 atgtcccatagctcttcatcaaaacaaatgacatgactgtagaagttggttttccaccaggaaaattcatcaggatctccattgaactttggaacttttc 26764501  T
Q  154 ca 155  Q
    ||    
T  26764502 ca 26764503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 26783332 - 26783444
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||||  ||||||| || ||||||| ||  || || | |||||| ||||||| |||||| ||||| ||||||||||||||||||||| ||||||    
T  26783332 atgtcccatagtacttcatctaaacccatgacatgactatagaagttggtcttccaccatgaaaattcttcaggatctccattgaactttggaacttttc 26783431  T
Q  154 cagaatctgattt 166  Q
     ||| || |||||    
T  26783432 tagagtcagattt 26783444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 21200219 - 21200099
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| |||||||| || |||||| | || ||||||| ||  || || | ||||||||||||||  ||||| ||||| ||||||||||| ||||||||    
T  21200219 cttcaagtatgtcccagagttcttcacctaaacccatgacatgactatagaagttggttttccaccaagaaaattcttcaggatctccattaaactttgg 21200120  T
Q  146 agcttttccagaatctgattt 166  Q
      |||| ||||| || |||||    
T  21200119 gactttaccagagtcagattt 21200099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 8902 - 8717
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||||||||||||||||||| ||||||| || |||||||||| |||||||||||||||||||||||||||||||||    
T  8902 cttcaagaatatcccatagttcttcatccaatcccatgatatagttgtacatatttgttttccaccatgaaaactcttctggatctccattgaactttgg 8803  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    ||||||||||||||||||||| || ||||| |||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  8802 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgacactagtgtattttaaggatgtagttgattcctctc 8717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 6e-58; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 54 - 231
Target Start/End: Complemental strand, 7690597 - 7690420
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  7690597 atgtcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctggatctccattgaattttggagcttttc 7690498  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    |||| |||||||| || |||||||||||||||| |||||||||| |  ||||||||   |||||||| ||||| ||||    
T  7690497 cagagtctgatttcctttcagctgtatcatagtcatgtttgacacttgtgtattttaaggatgtagttgattcctctc 7690420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 5640838 - 5640679
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  5640838 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 5640739  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  5640738 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 5640679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 3181297 - 3181453
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  3181297 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 3181396  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  3181397 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 3181453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 5842900 - 5843056
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  5842900 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 5842999  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  5843000 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 5843056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 7516980 - 7517136
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  7516980 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 7517079  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  7517080 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 7517136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 38104781 - 38104937
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  38104781 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 38104880  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  38104881 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 38104937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 4176995 - 4177154
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  4176995 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 4177094  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  4177095 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 4177154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 12615451 - 12615292
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  12615451 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 12615352  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  12615351 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 12615292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 21876841 - 21876998
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  21876841 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 21876940  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgt 211  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||    
T  21876941 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgt 21876998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 47609061 - 47608908
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  47609061 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 47608962  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  47608961 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 47608908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 12740221 - 12740380
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  12740221 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctgcatctccattaaactttggagcttttc 12740320  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  12740321 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 12740380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 19186901 - 19187058
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||| ||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  19186901 tcccatagctattcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 19187000  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgaca-ttgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| ||||  ||||||||||    
T  19187001 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgttattttgtag 19187058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 46 - 227
Target Start/End: Original strand, 22018249 - 22018430
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||||||||| |  |||||||||||| ||||||||||||||||||     
T  22018249 cttcaagaatatcccacagctcatcatcaaatcccatgatgtagctgtacatgttggttttccaacaagaaaactcttctagatctccattgaactttga 22018348  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 227  Q
    |||||||||||||||||||||  ||||||| ||| |||| | ||||   |||||  ||||| ||||||||||| ||||||||    
T  22018349 agcttttccagaatctgatttcttgtcagcagtaccataatcatgtgcaacattagtgtatcttgtagatgtactggattca 22018430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 38094155 - 38094312
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  38094155 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 38094254  T
Q  157 aatctgattttctgtcagc-tgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  |||||||  |||||||||| ||| |||||| |  ||||||||||||    
T  38094255 agtctgttttcttgtcagcaagtatcatagtcatgcttgacacttgtgtattttgtag 38094312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 35639166 - 35639024
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  35639166 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 35639067  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  35639066 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 35639024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 36237558 - 36237416
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  36237558 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 36237459  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  36237458 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 36237416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 196
Target Start/End: Complemental strand, 51630320 - 51630178
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  51630320 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 51630221  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  51630220 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 51630178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 20874361 - 20874280
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctgg 127  Q
    |||||||||| || || ||||||||||| ||||||||||| |||||||||||||||||||||||||  ||||||||||||||    
T  20874361 cttcaagaatatctcacagctcttcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctgg 20874280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 23023802 - 23023911
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| ||||||||||| |||||||| || ||||||| ||   |||| | ||||||||||||||  ||||| ||||| ||||||||||| ||||||||    
T  23023802 cttcaagtatgtcccatagttcttcatctaaacccatgacatgattgtagaagttggttttccaccaagaaaattcttcaggatctccattaaactttgg 23023901  T
Q  146 agcttttcca 155  Q
    | ||||||||    
T  23023902 aacttttcca 23023911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 151
Target Start/End: Original strand, 18613845 - 18613950
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||| || ||||||| |||  |||| | ||||||||||||||  || || ||||| ||||||||||| ||||||||    
T  18613845 cttcaagaatatcccatagttcttcatctaaacccatgacataattgtagaagttggttttccaccaagagaattcttcaggatctccattaaactttgg 18613944  T
Q  146 agcttt 151  Q
    | ||||    
T  18613945 aacttt 18613950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 22431249 - 22431148
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  ||||| | |||||| |||||||  ||||| ||||| |||||| |||||||||||||| ||||||    
T  22431249 atgtcccatagttcttcatctaagcccatgacatgactgtagaagttggtcttccaccaggaaaattcttcaggatcttcattgaactttggaacttttc 22431150  T
Q  154 ca 155  Q
    ||    
T  22431149 ca 22431148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 21125505 - 21125404
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||   |||| | ||||||||||||||  ||||| ||||| ||||||||||| |||||  || ||||||    
T  21125505 atgtcccatagttcttcatctaaacccatgacatgattgtagaagttggttttccaccaggaaaattcttcaggatctccattaaacttatgaacttttc 21125406  T
Q  154 ca 155  Q
    ||    
T  21125405 ca 21125404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 112; Significance: 1e-56; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 46 - 197
Target Start/End: Complemental strand, 34040 - 33889
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  34040 cttcaagaatatcccatagttcttcatcaaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctagatctccattgaactttgg 33941  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgaca 197  Q
    ||||||||||||||||||||| || ||||| |||||||||| ||||||||||    
T  33940 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgaca 33889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 41577 - 41418
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  41577 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttttggatctccattaaactttggagcttttc 41478  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  41477 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 41418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 46 - 197
Target Start/End: Complemental strand, 14837206 - 14837055
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  14837206 cttcaagaatatcccatagttcttcatcaaatcccatgatatagctgtacatattggttttccaccatgaaaactcttctagatctccattgaactttgg 14837107  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgaca 197  Q
    ||||||||||||||||||||| || ||||| |||||||||| ||||||||||    
T  14837106 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgaca 14837055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 46 - 197
Target Start/End: Original strand, 16316484 - 16316635
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  16316484 cttcaagtatatcccatagttcttcatccaatcccatgatatagctgtacatattggttttccaccacgaaaactcttctggatctccattgaactttgg 16316583  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgaca 197  Q
    ||||||||||||||||||||| || ||||| |||||||||| ||||||||||    
T  16316584 agcttttccagaatctgatttcctttcagcagtatcatagtcatgtttgaca 16316635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 46 - 208
Target Start/End: Original strand, 3389605 - 3389767
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||| | || ||||| |||||||||||||||||||||||| ||||||| ||||||||||||| | |||||||||||||||||||||||||||||||    
T  3389605 cttcaagattatctcatagttcttcatccaatcccatgatatagttgtacatattggttttccaccataaaaactcttctggatctccattgaactttgg 3389704  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattt 208  Q
    ||||||||||||||||||||| || |||||  ||||||||| |||||||||| | ||||||||    
T  3389705 agcttttccagaatctgatttcctttcagcaatatcatagtcatgtttgacactattgtattt 3389767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 19945428 - 19945269
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19945428 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 19945329  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  19945328 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 19945269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 27816036 - 27815877
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  27816036 atgtcccatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 27815937  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  27815936 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 27815877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 14711921 - 14711740
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| | ||| ||||| ||||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||    
T  14711921 cttcaagaatatcccacaactcctcatctaatcccatgatgtagctgtacatattggttttccaccaagaaaactcttctggatctccattgaactttgg 14711822  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 227  Q
    |||||||||||||||||||||  ||||||| ||| |||||| ||||   |||||  ||||| ||||||||||| ||||||||    
T  14711821 agcttttccagaatctgatttcttgtcagcagtaccatagtcatgtccaacattagtgtatcttgtagatgtactggattca 14711740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 18131336 - 18131180
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  18131336 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 18131237  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  18131236 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 18131180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 36028059 - 36028215
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  36028059 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 36028158  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  36028159 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 36028215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 55746339 - 55746183
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  55746339 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 55746240  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  55746239 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 55746183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 460328 - 460487
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  460328 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 460427  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  460428 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 460487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 22006182 - 22006341
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  22006182 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 22006281  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  22006282 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 22006341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 27175839 - 27175998
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  27175839 atgtcccataactcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 27175938  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  27175939 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 27175998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 30927583 - 30927424
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  30927583 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttc 30927484  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  30927483 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 30927424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 10741685 - 10741532
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  10741685 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 10741586  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  10741585 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 10741532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 10955454 - 10955301
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  10955454 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 10955355  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  10955354 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 10955301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 57 - 210
Target Start/End: Original strand, 27666341 - 27666494
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  27666341 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 27666440  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  |||||||||    
T  27666441 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttg 27666494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 16265633 - 16265789
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    ||||||||||| |||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  16265633 tcccatagctcgtcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 16265732  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  16265733 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 16265789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 14844742 - 14844583
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||| |||||||||||| ||||||||||||||||    
T  14844742 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttttggatctccattaaactttggagcttttc 14844643  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  14844642 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 14844583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 17927864 - 17928023
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  17927864 atgtcccataactcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatgtccattaaactttggagcttttc 17927963  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  17927964 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 17928023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 40455450 - 40455291
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||| |||||||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  40455450 atgtcctatagctcttcatccaatcccatgataaagctgtacatatttgttttccaccatgaaaactcttctggatgtccattaaactttggagcttttc 40455351  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  40455350 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 40455291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 57 - 231
Target Start/End: Original strand, 5021904 - 5022078
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||| ||||| || |||||||||| ||||||||||||||| |||||||| |||||||||||||| ||||    
T  5021904 tcccatagctcttcatccaatcccatgataaagctatacatatttgttttccaccatgaaaactcttctgggtctccattaaactttggagctttaccag 5022003  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattcatctc 231  Q
    | |||| |||  ||||||| |||||||||| |||||||||| |  |||||||| | |||||||| ||||| ||||    
T  5022004 agtctgttttcttgtcagccgtatcatagtcatgtttgacacttgtgtattttatggatgtagttgattcttctc 5022078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 16820456 - 16820318
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |    
T  16820456 cttcaagaatatcccacagctcctcatctaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttag 16820357  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcata 184  Q
    |||||||||||||||| ||||  |||||| |||| ||||    
T  16820356 agcttttccagaatctaatttcttgtcagatgtaccata 16820318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 210
Target Start/End: Complemental strand, 18753580 - 18753424
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  18753580 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 18753481  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttg 210  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| | ||||||||||    
T  18753480 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacactcttgtattttg 18753424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 196
Target Start/End: Original strand, 49517302 - 49517444
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||||||||| ||||||||| |||||||||||| |||||||||| || ||||||||||  ||||||||||||||||||||||| ||| ||||||||||||    
T  49517302 atgtcccataactcttcatctaatcccatgataaagctgtacatattagttttccaccaagaaaactcttctggatctccattaaaccttggagcttttc 49517401  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgac 196  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||    
T  49517402 cagagtctgttttcttgtcagcagtatcatagtcatgcttgac 49517444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 54 - 197
Target Start/End: Original strand, 18065739 - 18065882
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||| ||||||||  |||| ||||| || |||||||||| |||||||||||||||||||||||| ||||| |||||||| |    
T  18065739 atgtcccatagctcttcatccaaacccatgatgaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttaggagctttac 18065838  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgaca 197  Q
    |||| |||| |||  ||||||| |||||||||| ||| ||||||    
T  18065839 cagagtctgttttcttgtcagccgtatcatagtcatgcttgaca 18065882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 11470428 - 11470505
Alignment:
Q  48 tcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttct 125  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  11470428 tcaagaatgtcccatagttcttcatccaatcccatgatgtagctgtacatgttggttttccaccatgaaaactcttct 11470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 17246516 - 17246617
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    |||| |||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||||||||| ||||||||||||||||||||| ||||||    
T  17246516 atgttccatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaactcttcaggatctccattgaactttggaacttttc 17246615  T
Q  154 ca 155  Q
    ||    
T  17246616 ca 17246617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 4988882 - 4988828
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccacc 111  Q
    |||||||||||||||||||||||||||||| |||| ||||| || ||||||||||    
T  4988882 tcccatagctcttcatccaatcccatgataaagctatacatatttgttttccacc 4988828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 10662318 - 10662242
Alignment:
Q  90 ctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaatctgattt 166  Q
    ||||||||||||||||||||||  || || ||||  |||||||| || |||||||||||||||||||| || |||||    
T  10662318 ctgtacatgttggttttccaccaagagaattctttaggatctccgttaaactttggagcttttccagagtcagattt 10662242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 166
Target Start/End: Complemental strand, 10876463 - 10876387
Alignment:
Q  90 ctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaatctgattt 166  Q
    ||||||||||||||||||||||  || || ||||  |||||||| || |||||||||||||||||||| || |||||    
T  10876463 ctgtacatgttggttttccaccaagagaattctttaggatctccgttaaactttggagcttttccagagtcagattt 10876387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 38081 - 37925
Alignment:
Q  57 tcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccag 156  Q
    |||||||||||||||||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  38081 tcccatagctcttcatccaatcccatgataaagctgtacatattagttttccaccatgaaaactcttctggatctccattaaactttggagcttttccag 37982  T
Q  157 aatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    | |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  37981 agtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 37925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 2196 - 2015
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||| |||| ||||| ||||| ||||| ||||||||||| ||| |||| ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  2196 cttcaggaatatcccacagctcctcatctaatcccatgatgtagttgtaaatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 2097  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 227  Q
    |||||||||||||||||||||  ||||||| ||| |||||| ||||   |||||  ||||| ||||||||||| ||||||||    
T  2096 agcttttccagaatctgatttcttgtcagcagtaccatagtcatgtccaacattagtgtatcttgtagatgtactggattca 2015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 46 - 227
Target Start/End: Complemental strand, 41527 - 41346
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| ||| |||||||||||||||||||||  ||||||||||||| ||||||||||||||||||    
T  41527 cttcaagaatatcccacagctcctcatctaatcccatgatgtagttgtacatgttggttttccaccaagaaaactcttctgtatctccattgaactttgg 41428  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtagatgtagtggattca 227  Q
    |||||||||||||||||||||  ||||||| ||| |||||| ||||   |||||  ||||| ||||||||| | ||||||||    
T  41427 agcttttccagaatctgatttcatgtcagcagtaccatagtcatgtccaacattagtgtatcttgtagatgaactggattca 41346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 92; Significance: 8e-45; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 54 - 213
Target Start/End: Complemental strand, 44884 - 44725
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| || |||||||| | |||||||||||||||||||||||| ||||||||||||||||    
T  44884 atgtctcatagctcttcatccaatcccatgataaagctgtacatatttgttttccaacatgaaaactcttctggatctccattaaactttggagcttttc 44785  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgacattgttgtattttgtag 213  Q
    |||| |||| |||  ||||||| |||||||||| ||| |||||| |  ||||||||||||    
T  44784 cagagtctgttttcttgtcagcagtatcatagtcatgcttgacacttgtgtattttgtag 44725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 36377 - 36478
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| |||| |||||||||||||||| ||||||    
T  36377 atgtcccatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatatccattgaactttggaacttttc 36476  T
Q  154 ca 155  Q
    ||    
T  36477 ca 36478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 134437 - 134538
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| |||| |||||||||||||||| ||||||    
T  134437 atgtcccatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatatccattgaactttggaacttttc 134536  T
Q  154 ca 155  Q
    ||    
T  134537 ca 134538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 46 - 144
Target Start/End: Original strand, 158070 - 158168
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttg 144  Q
    ||||||| ||||||||||| |||||||| || ||||||| ||  || || | ||||||||||||||  || || ||||| ||||||||||| |||||||    
T  158070 cttcaagtatgtcccatagttcttcatctaaacccatgacatgactatagaagttggttttccaccaagagaattcttcaggatctccattaaactttg 158168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 2427 - 2289
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  2427 cttcaagaatatcccacagctcatcatccaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 2328  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcata 184  Q
    || ||||| ||||||||||||  | ||||||||| ||||    
T  2327 agattttctagaatctgatttcttatcagctgtaccata 2289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 11467 - 11329
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||| |||| ||||||||||| ||||| ||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  11467 cttcaggaatatcccatagctcctcatctaatcccatgatgtagatgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 11368  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcata 184  Q
    |||||||||||||||||||||  ||||||| ||| ||||    
T  11367 agcttttccagaatctgatttcttgtcagcagtaccata 11329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1820 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1820
Description:

Target: scaffold1820; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 179
Target Start/End: Original strand, 562 - 695
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| | ||| ||||||||||||||||| |||||||||||||||||||||||||  ||||||||||| | ||||||||||||||||||    
T  562 cttcaagaatatcccacaactcatcatccaatcccatgatgtagctgtacatgttggttttccaccaagaaaactcttcagaatctccattgaactttgg 661  T
Q  146 agcttttccagaatctgattttctgtcagctgta 179  Q
    |||||||||||||||||||||  | |||||||||    
T  662 agcttttccagaatctgatttcttatcagctgta 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1507 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold1507
Description:

Target: scaffold1507; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 517 - 379
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||||||||| | ||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  517 cttcaagaatatcccacagctcttcatctattcccatgatgtagttgtacatgttggttttccaccaagaaaactcttctggatctccattgaactttgg 418  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcata 184  Q
    |||||| | ||||||||||||  | ||||||||| ||||    
T  417 agctttgctagaatctgatttcttatcagctgtaccata 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 81; Significance: 3e-38; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 46 - 166
Target Start/End: Complemental strand, 165839 - 165719
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| |||||| |||||| |||||||||||  ||||||||||| ||||||||||||||||||||    
T  165839 cttcaagaatatcccacagctcatcatctaatcccatgatgtagctgcacatgtcggttttccaccaagaaaactcttcaggatctccattgaactttgg 165740  T
Q  146 agcttttccagaatctgattt 166  Q
    |||||||||||||||||||||    
T  165739 agcttttccagaatctgattt 165719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 155
Target Start/End: Complemental strand, 66538 - 66481
Alignment:
Q  98 gttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttcca 155  Q
    ||||||||||||||  ||||| ||||| ||||||||||| ||||||||| ||| ||||    
T  66538 gttggttttccaccaggaaaattcttcaggatctccattaaactttggaacttctcca 66481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 184
Target Start/End: Complemental strand, 683 - 545
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||| ||| ||||| ||||| ||||||| ||||||||| |||||||||||||||||||||||||  |||||||||||  |||||||||||||||||||    
T  683 cttcaataatatcccacagctcatcatccagtcccatgatgtagctgtacatgttggttttccaccaagaaaactcttcaagatctccattgaactttgg 584  T
Q  146 agcttttccagaatctgattttctgtcagctgtatcata 184  Q
    |||||||| ||| ||||||||  | ||||||||| ||||    
T  583 agcttttctagagtctgatttcttatcagctgtaccata 545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 54 - 197
Target Start/End: Complemental strand, 52864 - 52721
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||| ||||||||  |||| ||||| || |||||||||| |||||||||||||||||||||||| |||||  ||||||| |    
T  52864 atgtcccatagctcttcatccaaacccatgatgaagctatacatatttgttttccaccatgaaaactcttctggatctccattaaacttaagagctttac 52765  T
Q  154 cagaatctgattttctgtcagctgtatcatagttatgtttgaca 197  Q
     ||| |||| |||  ||||||| |||||||||| ||| ||||||    
T  52764 aagagtctgttttcttgtcagccgtatcatagtcatgcttgaca 52721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 11282 - 11172
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| ||||||||||| |||||||| || ||||||| ||||||||| | ||||||||||||||  ||||| ||||| ||||||||||||||||| ||    
T  11282 cttcaagtatgtcccatagttcttcatctaaccccatgacatagctgtagaagttggttttccaccaagaaaattcttcaggatctccattgaacttagg 11183  T
Q  146 agcttttccag 156  Q
    | |||||||||    
T  11182 aacttttccag 11172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 15955 - 15845
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| ||||||||||| |||||||| || ||||||| ||||||||| | ||||||||||||||  ||||| ||||| ||||||||||||||||| ||    
T  15955 cttcaagtatgtcccatagttcttcatctaaccccatgacatagctgtagaagttggttttccaccaagaaaattcttcaggatctccattgaacttagg 15856  T
Q  146 agcttttccag 156  Q
    | |||||||||    
T  15855 aacttttccag 15845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 110765 - 110653
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||||||||||||| ||||||| ||  ||||| | ||||||||||||||   |||| ||||| ||||||||||||||||||||| ||||||    
T  110765 atgtcccatagctcttcatccaaacccatgacatgactgtataagttggttttccaccagaaaaattcttcaggatctccattgaactttggaacttttc 110666  T
Q  154 cagaatctgattt 166  Q
    || | ||||||||    
T  110665 catagtctgattt 110653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 46 - 159
Target Start/End: Complemental strand, 22110 - 21997
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| ||||| ||||| |||||||| || ||||||| |||| |||| | ||||||||||||||  ||||| ||||| |||||||||||||||||  |    
T  22110 cttcaagtatgtctcatagttcttcatctaaacccatgacatagatgtagaagttggttttccaccaagaaaattcttcaggatctccattgaacttaag 22011  T
Q  146 agcttttccagaat 159  Q
    | ||||||||||||    
T  22010 aacttttccagaat 21997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 166
Target Start/End: Original strand, 7600 - 7720
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| ||||||||||| |||||||| || ||||||| ||  || || | ||||||||||||||  ||||| ||||| ||||||||||| ||||||||    
T  7600 cttcaagtatgtcccatagttcttcatctaaacccatgacatgactatagaagttggttttccaccaggaaaattcttcaggatctccattaaactttgg 7699  T
Q  146 agcttttccagaatctgattt 166  Q
    | |||||||||| || |||||    
T  7700 aacttttccagagtcagattt 7720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 7867 - 7766
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  ||||| | |||||| |||||||  ||||| ||||| ||||||||||||||||||||| ||||||    
T  7867 atgtcccatagttcttcatctaaacccatgacatgactgtagaagttggtcttccaccaggaaaattcttcaggatctccattgaactttggaacttttc 7768  T
Q  154 ca 155  Q
    ||    
T  7767 ca 7766  T

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Target: scaffold0113 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 155
Target Start/End: Original strand, 2128 - 2237
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    ||||||| ||||||||||| |||||||| || ||||||| ||  || || | ||||||||||||||  || || ||||| ||||||||||| ||||||||    
T  2128 cttcaagtatgtcccatagttcttcatctaaacccatgacatgactatagaagttggttttccaccaagagaattcttcaggatctccattaaactttgg 2227  T
Q  146 agcttttcca 155  Q
    | ||||||||    
T  2228 aacttttcca 2237  T

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Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 210346 - 210447
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||||| |||||| || ||||||| ||  ||||| | ||||||||||||||  ||||| |||||  ||||||| |||||||||||| ||||||    
T  210346 atgtcccatagcttttcatctaaacccatgacatgactgtagaagttggttttccaccaggaaaattcttcaagatctccgttgaactttggaacttttc 210445  T
Q  154 ca 155  Q
    ||    
T  210446 ca 210447  T

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Target: scaffold0317 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 11557 - 11669
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||||||| ||||||||| ||||||    
T  11557 atgtcccatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatctccattaaactttggaacttttc 11656  T
Q  154 cagaatctgattt 166  Q
    |||| || |||||    
T  11657 cagagtcagattt 11669  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 98732 - 98631
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||| ||||| |||||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||||||||||||||||| ||||||    
T  98732 atgtctcatagttcttcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatctccattgaactttggaacttttc 98633  T
Q  154 ca 155  Q
    ||    
T  98632 ca 98631  T

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Target: scaffold0498 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 1364 - 1264
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||||||||| || |||||||| || || |||| ||| ||||| | ||||||||||||||  || || |||||  |||||||||| ||||||||    
T  1364 cttcaagaatgtcccaaagttcttcatctaaaccaatgacataactgtagaagttggttttccaccaagagaaatcttcaagatctccattaaactttgg 1265  T
Q  146 a 146  Q
    |    
T  1264 a 1264  T

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Target: scaffold0359 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 6888 - 6787
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || ||||||| ||  || || | |||||| |||||||   |||| |||||  |||||||||||||||||||| ||||||    
T  6888 atgtcccatagttcttcatctaaacccatgacatgactatagaagttggtcttccaccagaaaaattcttcaagatctccattgaactttggaacttttc 6789  T
Q  154 ca 155  Q
    ||    
T  6788 ca 6787  T

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Target: scaffold0056 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 155
Target Start/End: Complemental strand, 26814 - 26713
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| |||||||| || || |||| ||  ||||| | ||||||||||||||  ||||| ||||| ||||||||||| |||||  || ||||||    
T  26814 atgtcccatagttcttcatctaaacctatgacatgactgtagaagttggttttccaccaggaaaattcttcaggatctccattaaacttatgaacttttc 26715  T
Q  154 ca 155  Q
    ||    
T  26714 ca 26713  T

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Target: scaffold0037 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 157
Target Start/End: Original strand, 76191 - 76302
Alignment:
Q  46 cttcaagaatgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttgg 145  Q
    |||||||||| |||||  | | |||||| || |||| ||| ||  |||||||||||||||||||||  || || ||||  ||||||||||| ||||||||    
T  76191 cttcaagaatatcccacggtttttcatctaaacccacgatgtaattgtacatgttggttttccaccaagagaattctttaggatctccattaaactttgg 76290  T
Q  146 agcttttccaga 157  Q
    || ||| |||||    
T  76291 aggtttgccaga 76302  T

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Target: scaffold0217 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 155
Target Start/End: Original strand, 18006 - 18107
Alignment:
Q  54 atgtcccatagctcttcatccaatcccatgatatagctgtacatgttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttc 153  Q
    ||||||||||| || ||||| || ||||||| ||  || || | |||||| |||||||  ||||| ||||| ||||||||||| ||||||| | ||||||    
T  18006 atgtcccatagttcatcatctaagcccatgacatgactatagaagttggtcttccaccaggaaaattcttcaggatctccattcaactttgtaacttttc 18105  T
Q  154 ca 155  Q
    ||    
T  18106 ca 18107  T

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Target: scaffold0290 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 19774 - 19706
Alignment:
Q  98 gttggttttccaccctgaaaactcttctggatctccattgaactttggagcttttccagaatctgattt 166  Q
    |||||| |||||||   |||| ||||| |||||||| |||||||||||| |||||||||| || |||||    
T  19774 gttggtcttccaccagaaaaattcttcaggatctcctttgaactttggaacttttccagagtcagattt 19706  T

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Target: scaffold0146 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 14110 - 14162
Alignment:
Q  114 gaaaactcttctggatctccattgaactttggagcttttccagaatctgattt 166  Q
    ||||| ||||| ||||||||||| ||||||||| |||||||||| || |||||    
T  14110 gaaaattcttcaggatctccattaaactttggaacttttccagagtcagattt 14162  T

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