View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20537_low_1 (Length: 486)

Name: NF20537_low_1
Description: NF20537
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20537_low_1
NF20537_low_1
[»] chr5 (59 HSPs)
chr5 (252-482)||(14980006-14980235)
chr5 (252-482)||(166604-166845)
chr5 (252-482)||(36660384-36660623)
chr5 (301-482)||(43257815-43257998)
chr5 (252-479)||(4011618-4011831)
chr5 (294-482)||(31889741-31889917)
chr5 (294-482)||(34919752-34919933)
chr5 (294-479)||(7388150-7388335)
chr5 (294-482)||(31557295-31557489)
chr5 (382-482)||(4967446-4967546)
chr5 (297-483)||(16886087-16886268)
chr5 (301-482)||(15400177-15400370)
chr5 (294-423)||(42329558-42329700)
chr5 (261-423)||(793618-793793)
chr5 (350-482)||(12167565-12167700)
chr5 (301-482)||(36783361-36783553)
chr5 (252-482)||(4751485-4751729)
chr5 (294-453)||(27810345-27810516)
chr5 (257-362)||(38982231-38982336)
chr5 (257-359)||(33585064-33585166)
chr5 (294-466)||(39059805-39059987)
chr5 (294-362)||(13066712-13066780)
chr5 (294-362)||(29653600-29653668)
chr5 (252-423)||(33822515-33822699)
chr5 (294-446)||(4742257-4742421)
chr5 (294-362)||(4371362-4371430)
chr5 (301-445)||(33693746-33693891)
chr5 (372-482)||(27652274-27652384)
chr5 (372-465)||(8961007-8961099)
chr5 (294-423)||(34171163-34171302)
chr5 (294-362)||(4833719-4833787)
chr5 (252-362)||(32963095-32963202)
chr5 (294-362)||(12992063-12992129)
chr5 (252-362)||(17674165-17674275)
chr5 (297-358)||(32690821-32690882)
chr5 (294-361)||(33741464-33741531)
chr5 (297-356)||(41845374-41845433)
chr5 (301-362)||(28640088-28640149)
chr5 (294-338)||(27658682-27658726)
chr5 (375-423)||(29044811-29044859)
chr5 (294-357)||(36296225-36296286)
chr5 (372-423)||(29653526-29653577)
chr5 (372-423)||(33584987-33585038)
chr5 (294-344)||(7731697-7731747)
chr5 (373-419)||(36296150-36296196)
chr5 (377-482)||(1513072-1513177)
chr5 (374-411)||(4833657-4833694)
chr5 (297-342)||(8961117-8961162)
chr5 (377-414)||(38982168-38982205)
chr5 (294-337)||(12167693-12167736)
chr5 (294-341)||(28316712-28316759)
chr5 (301-340)||(29051620-29051659)
chr5 (378-425)||(32963020-32963066)
chr5 (293-323)||(24436585-24436615)
chr5 (377-415)||(32690753-32690791)
chr5 (252-285)||(32158529-32158562)
chr5 (375-416)||(33741556-33741597)
chr5 (252-284)||(10345098-10345130)
chr5 (252-284)||(42103977-42104009)
[»] chr4 (72 HSPs)
chr4 (255-479)||(52732555-52732782)
chr4 (252-482)||(43421082-43421314)
chr4 (249-477)||(51930550-51930765)
chr4 (318-480)||(34360033-34360197)
chr4 (294-461)||(15501133-15501302)
chr4 (255-482)||(21045113-21045327)
chr4 (252-482)||(44855195-44855438)
chr4 (301-482)||(54512034-54512217)
chr4 (294-477)||(19849079-19849273)
chr4 (252-482)||(31817157-31817373)
chr4 (256-475)||(50072238-50072438)
chr4 (257-482)||(36805408-36805637)
chr4 (294-482)||(32140944-32141119)
chr4 (293-479)||(30022062-30022258)
chr4 (294-478)||(39671068-39671238)
chr4 (301-479)||(45520419-45520607)
chr4 (294-423)||(24259606-24259748)
chr4 (294-461)||(37445655-37445833)
chr4 (383-482)||(56422957-56423056)
chr4 (294-482)||(22212336-22212535)
chr4 (252-362)||(29840028-29840139)
chr4 (294-363)||(6462004-6462073)
chr4 (294-449)||(35928486-35928650)
chr4 (257-361)||(28116203-28116307)
chr4 (294-423)||(17499732-17499874)
chr4 (294-423)||(31941553-31941695)
chr4 (297-479)||(11835105-11835295)
chr4 (293-423)||(47321138-47321282)
chr4 (294-482)||(56556237-56556410)
chr4 (294-359)||(19282501-19282567)
chr4 (372-482)||(34096100-34096210)
chr4 (301-414)||(31987306-31987430)
chr4 (293-482)||(34124289-34124491)
chr4 (294-423)||(45889559-45889700)
chr4 (294-362)||(51434346-51434414)
chr4 (303-362)||(30492732-30492791)
chr4 (372-423)||(54233902-54233953)
chr4 (376-482)||(42672477-42672583)
chr4 (297-355)||(45903501-45903559)
chr4 (293-414)||(38692408-38692516)
chr4 (372-479)||(3093433-3093539)
chr4 (293-424)||(6510112-6510254)
chr4 (368-478)||(38761788-38761898)
chr4 (295-344)||(17317950-17317999)
chr4 (294-341)||(1868208-1868255)
chr4 (372-423)||(4408192-4408243)
chr4 (293-344)||(6232141-6232192)
chr4 (294-415)||(32141163-32141280)
chr4 (372-423)||(51434272-51434323)
chr4 (372-476)||(29289852-29289959)
chr4 (306-362)||(44835341-44835398)
chr4 (297-354)||(54233844-54233900)
chr4 (294-362)||(54091953-54092021)
chr4 (176-215)||(31514710-31514749)
chr4 (294-344)||(6231652-6231702)
chr4 (301-359)||(29289982-29290040)
chr4 (374-419)||(34534111-34534157)
chr4 (294-343)||(4408286-4408335)
chr4 (374-423)||(6462102-6462151)
chr4 (294-362)||(34096010-34096079)
chr4 (296-361)||(55126494-55126559)
chr4 (252-317)||(4505293-4505358)
chr4 (375-423)||(28116334-28116382)
chr4 (415-479)||(45903377-45903441)
chr4 (294-362)||(55548313-55548380)
chr4 (250-285)||(34359977-34360012)
chr4 (376-423)||(55126587-55126634)
chr4 (372-482)||(17317805-17317910)
chr4 (393-482)||(51737280-51737367)
chr4 (252-284)||(31941760-31941792)
chr4 (252-284)||(39985024-39985056)
chr4 (252-284)||(56373493-56373525)
[»] chr3 (75 HSPs)
chr3 (259-482)||(26965463-26965688)
chr3 (295-482)||(27483148-27483337)
chr3 (252-479)||(37225553-37225791)
chr3 (294-479)||(2567970-2568157)
chr3 (252-482)||(34059832-34060063)
chr3 (301-479)||(1340887-1341067)
chr3 (252-482)||(44648365-44648597)
chr3 (293-482)||(36771531-36771722)
chr3 (293-482)||(19552538-19552730)
chr3 (252-482)||(25061662-25061891)
chr3 (252-482)||(647547-647787)
chr3 (252-482)||(790053-790270)
chr3 (301-482)||(31290929-31291111)
chr3 (302-477)||(40048900-40049067)
chr3 (295-482)||(38457460-38457658)
chr3 (294-482)||(46362965-46363165)
chr3 (299-479)||(35239390-35239556)
chr3 (295-477)||(53716029-53716196)
chr3 (255-482)||(43580435-43580677)
chr3 (294-444)||(83295-83455)
chr3 (294-423)||(54933217-54933359)
chr3 (252-423)||(25722473-25722657)
chr3 (293-412)||(43599855-43599976)
chr3 (256-462)||(41287037-41287256)
chr3 (294-444)||(44854314-44854475)
chr3 (372-483)||(2662446-2662557)
chr3 (252-344)||(13485909-13486001)
chr3 (294-423)||(2988622-2988763)
chr3 (252-482)||(54261372-54261615)
chr3 (252-423)||(43169291-43169475)
chr3 (297-475)||(43600152-43600341)
chr3 (253-423)||(43687895-43688081)
chr3 (293-362)||(32303991-32304060)
chr3 (297-479)||(22414757-22414948)
chr3 (301-380)||(45095559-45095636)
chr3 (252-482)||(20512449-20512692)
chr3 (252-362)||(36541447-36541558)
chr3 (307-481)||(38165617-38165783)
chr3 (297-423)||(44645340-44645479)
chr3 (294-423)||(51381720-51381865)
chr3 (294-359)||(22730924-22730989)
chr3 (294-411)||(27027732-27027860)
chr3 (253-477)||(4391862-4392088)
chr3 (315-446)||(9167680-9167810)
chr3 (301-445)||(42740238-42740383)
chr3 (372-482)||(5244673-5244782)
chr3 (294-414)||(3000751-3000883)
chr3 (372-448)||(27039415-27039492)
chr3 (296-361)||(35099453-35099518)
chr3 (294-359)||(36310339-36310404)
chr3 (301-399)||(4476398-4476498)
chr3 (295-359)||(42857148-42857212)
chr3 (299-362)||(52222831-52222892)
chr3 (294-357)||(49470788-49470851)
chr3 (372-423)||(53560754-53560805)
chr3 (302-344)||(15514830-15514872)
chr3 (294-356)||(52202383-52202445)
chr3 (384-461)||(43736846-43736922)
chr3 (252-356)||(42791284-42791388)
chr3 (294-358)||(50420258-50420321)
chr3 (293-357)||(53560663-53560726)
chr3 (372-414)||(16240664-16240706)
chr3 (293-362)||(5244584-5244652)
chr3 (378-419)||(42007078-42007119)
chr3 (252-284)||(2458215-2458247)
chr3 (372-420)||(36541581-36541629)
chr3 (176-215)||(2586983-2587022)
chr3 (392-479)||(22731040-22731126)
chr3 (376-423)||(32303917-32303964)
chr3 (377-414)||(35099389-35099426)
chr3 (176-212)||(2586918-2586954)
chr3 (252-284)||(41287407-41287439)
chr3 (252-284)||(42886706-42886738)
chr3 (252-284)||(51398217-51398249)
chr3 (252-284)||(54261624-54261656)
[»] chr2 (47 HSPs)
chr2 (252-480)||(29795156-29795386)
chr2 (317-482)||(40410473-40410640)
chr2 (301-482)||(40987237-40987418)
chr2 (294-482)||(4840682-4840881)
chr2 (294-461)||(1381748-1381915)
chr2 (252-461)||(4766188-4766383)
chr2 (252-414)||(4536530-4536700)
chr2 (296-482)||(7743401-7743598)
chr2 (297-479)||(1298738-1298931)
chr2 (252-479)||(34225730-34225944)
chr2 (299-461)||(36360351-36360522)
chr2 (252-482)||(43388612-43388853)
chr2 (301-466)||(14378219-14378371)
chr2 (252-482)||(24775145-24775386)
chr2 (252-362)||(33093324-33093434)
chr2 (297-439)||(16316710-16316863)
chr2 (320-482)||(37106886-37107061)
chr2 (301-461)||(42969904-42970065)
chr2 (372-476)||(43460860-43460961)
chr2 (294-423)||(14698010-14698128)
chr2 (252-414)||(1360132-1360306)
chr2 (252-419)||(2459729-2459909)
chr2 (294-362)||(10580944-10581012)
chr2 (294-362)||(18374850-18374918)
chr2 (294-423)||(41984416-41984559)
chr2 (252-419)||(775902-776080)
chr2 (206-250)||(39561608-39561652)
chr2 (256-359)||(43344312-43344412)
chr2 (293-423)||(25332568-25332710)
chr2 (301-359)||(39866762-39866820)
chr2 (372-419)||(4566139-4566186)
chr2 (295-362)||(14511459-14511526)
chr2 (294-345)||(45148055-45148106)
chr2 (294-344)||(6591963-6592013)
chr2 (381-483)||(11171839-11171941)
chr2 (253-338)||(19505934-19506018)
chr2 (372-423)||(10580870-10580921)
chr2 (372-423)||(39866685-39866736)
chr2 (245-335)||(45372645-45372736)
chr2 (372-461)||(43344199-43344288)
chr2 (315-362)||(43460792-43460839)
chr2 (373-423)||(33093458-33093508)
chr2 (252-282)||(45148121-45148151)
chr2 (308-357)||(4566214-4566263)
chr2 (377-414)||(14511552-14511589)
chr2 (252-284)||(4133229-4133261)
chr2 (252-284)||(43388571-43388603)
[»] chr7 (55 HSPs)
chr7 (258-477)||(28044101-28044321)
chr7 (293-481)||(36447567-36447757)
chr7 (252-439)||(32275161-32275350)
chr7 (252-482)||(17869194-17869435)
chr7 (300-446)||(22627345-22627495)
chr7 (252-482)||(42121507-42121740)
chr7 (304-482)||(34002087-34002277)
chr7 (252-448)||(40207379-40207574)
chr7 (260-482)||(41905890-41906122)
chr7 (293-482)||(18886667-18886843)
chr7 (293-479)||(33056242-33056433)
chr7 (252-414)||(40298804-40298977)
chr7 (294-482)||(3680878-3681077)
chr7 (256-459)||(42259527-42259740)
chr7 (252-481)||(1103440-1103681)
chr7 (256-362)||(22597191-22597297)
chr7 (369-475)||(34733394-34733500)
chr7 (255-362)||(43813431-43813538)
chr7 (252-362)||(19288434-19288544)
chr7 (294-423)||(19906413-19906553)
chr7 (293-482)||(32345789-32345991)
chr7 (255-359)||(36836019-36836123)
chr7 (252-423)||(26963436-26963620)
chr7 (294-359)||(30514972-30515037)
chr7 (294-419)||(31416768-31416906)
chr7 (257-423)||(36447083-36447261)
chr7 (297-362)||(42044066-42044131)
chr7 (301-479)||(26527356-26527544)
chr7 (301-362)||(19920358-19920419)
chr7 (261-361)||(10684918-10685018)
chr7 (252-344)||(18733410-18733502)
chr7 (372-471)||(42010541-42010640)
chr7 (299-423)||(39117502-39117638)
chr7 (298-410)||(5723006-5723128)
chr7 (372-423)||(10684843-10684894)
chr7 (301-466)||(30833066-30833241)
chr7 (372-423)||(6521907-6521958)
chr7 (372-423)||(19277059-19277110)
chr7 (293-344)||(32873268-32873319)
chr7 (369-414)||(33845433-33845478)
chr7 (373-446)||(47272240-47272313)
chr7 (252-313)||(40799947-40800008)
chr7 (369-412)||(18733540-18733583)
chr7 (294-419)||(29001582-29001696)
chr7 (301-344)||(40805030-40805073)
chr7 (372-411)||(48838711-48838750)
chr7 (372-423)||(36836148-36836199)
chr7 (252-312)||(36912064-36912124)
chr7 (293-332)||(42753705-42753744)
chr7 (301-358)||(47271731-47271789)
chr7 (252-284)||(1742198-1742230)
chr7 (252-284)||(18292290-18292322)
chr7 (252-284)||(19906621-19906653)
chr7 (252-284)||(32345748-32345780)
chr7 (179-215)||(33296028-33296064)
[»] chr1 (63 HSPs)
chr1 (294-482)||(48259818-48260008)
chr1 (295-482)||(1430491-1430666)
chr1 (297-482)||(40060861-40061048)
chr1 (294-481)||(11650056-11650254)
chr1 (252-482)||(84473-84690)
chr1 (294-478)||(24040983-24041155)
chr1 (295-477)||(1428865-1429059)
chr1 (252-482)||(28751363-28751605)
chr1 (256-479)||(5317535-5317769)
chr1 (252-482)||(43929640-43929881)
chr1 (253-423)||(44582792-44582975)
chr1 (252-482)||(50349812-50350054)
chr1 (252-423)||(2458964-2459144)
chr1 (252-446)||(12002202-12002407)
chr1 (297-446)||(17919811-17919971)
chr1 (372-481)||(52403563-52403672)
chr1 (294-423)||(38132204-38132322)
chr1 (369-482)||(6332251-6332364)
chr1 (295-439)||(37437402-37437549)
chr1 (339-482)||(30006182-30006327)
chr1 (294-422)||(254926-255068)
chr1 (305-482)||(10690910-10691074)
chr1 (256-446)||(17806366-17806567)
chr1 (294-419)||(26252116-26252254)
chr1 (252-423)||(22664897-22665075)
chr1 (372-477)||(43105562-43105667)
chr1 (294-414)||(12851739-12851870)
chr1 (259-444)||(43755016-43755187)
chr1 (252-362)||(44024501-44024611)
chr1 (293-482)||(44583769-44583968)
chr1 (297-362)||(45377236-45377301)
chr1 (294-477)||(43738214-43738408)
chr1 (297-423)||(49894807-49894920)
chr1 (293-446)||(5854215-5854381)
chr1 (294-446)||(48319992-48320144)
chr1 (245-361)||(15647150-15647264)
chr1 (252-358)||(15698841-15698949)
chr1 (382-466)||(45749470-45749554)
chr1 (301-479)||(2245791-2245982)
chr1 (297-362)||(50158392-50158458)
chr1 (294-482)||(15698705-15698905)
chr1 (294-356)||(26582923-26582985)
chr1 (294-423)||(28200236-28200379)
chr1 (301-359)||(40719020-40719078)
chr1 (296-419)||(42650267-42650402)
chr1 (294-342)||(9552436-9552484)
chr1 (295-362)||(11134548-11134614)
chr1 (372-418)||(672300-672346)
chr1 (302-362)||(52403482-52403542)
chr1 (372-423)||(9552369-9552420)
chr1 (380-422)||(35149394-35149436)
chr1 (294-344)||(35149485-35149535)
chr1 (299-356)||(50591388-50591446)
chr1 (252-318)||(672397-672463)
chr1 (294-358)||(6332164-6332229)
chr1 (252-313)||(30685482-30685543)
chr1 (294-356)||(9333105-9333168)
chr1 (294-356)||(9356878-9356941)
chr1 (252-283)||(50158232-50158263)
chr1 (413-479)||(50158276-50158342)
chr1 (374-419)||(50591336-50591381)
chr1 (252-284)||(2459212-2459244)
chr1 (301-337)||(43105692-43105728)
[»] scaffold0072 (2 HSPs)
scaffold0072 (301-479)||(12040-12219)
scaffold0072 (252-284)||(11996-12028)
[»] chr6 (31 HSPs)
chr6 (252-477)||(1924634-1924860)
chr6 (252-482)||(29915496-29915740)
chr6 (294-461)||(12828657-12828835)
chr6 (299-479)||(26669056-26669247)
chr6 (252-482)||(23936538-23936778)
chr6 (252-445)||(31275633-31275838)
chr6 (294-482)||(29927205-29927405)
chr6 (294-482)||(32258720-32258910)
chr6 (294-482)||(11785057-11785255)
chr6 (294-423)||(17345148-17345290)
chr6 (294-362)||(4123941-4124009)
chr6 (294-446)||(34576542-34576707)
chr6 (294-359)||(6143082-6143147)
chr6 (294-477)||(34439368-34439567)
chr6 (294-362)||(4132061-4132129)
chr6 (260-362)||(30627056-30627157)
chr6 (294-359)||(6140598-6140662)
chr6 (252-362)||(26189464-26189574)
chr6 (294-356)||(10494854-10494916)
chr6 (299-344)||(3015919-3015964)
chr6 (294-362)||(8052343-8052410)
chr6 (374-482)||(4131903-4132008)
chr6 (372-438)||(10494760-10494827)
chr6 (294-345)||(30626867-30626918)
chr6 (293-357)||(19689927-19689989)
chr6 (375-423)||(26189600-26189649)
chr6 (372-423)||(25932718-25932769)
chr6 (294-324)||(19416857-19416887)
chr6 (390-423)||(6992508-6992541)
chr6 (426-475)||(19689809-19689858)
chr6 (378-414)||(30627184-30627220)
[»] chr8 (58 HSPs)
chr8 (252-424)||(1774084-1774256)
chr8 (246-461)||(22601086-22601311)
chr8 (252-482)||(7612454-7612694)
chr8 (260-453)||(29931225-29931419)
chr8 (293-482)||(27109775-27109976)
chr8 (252-482)||(38329010-38329226)
chr8 (293-482)||(45187251-45187440)
chr8 (252-448)||(18666534-18666717)
chr8 (252-482)||(9022351-9022593)
chr8 (257-459)||(7129262-7129451)
chr8 (299-423)||(34168226-34168355)
chr8 (252-423)||(8471237-8471397)
chr8 (297-446)||(16208951-16209102)
chr8 (294-481)||(36915365-36915561)
chr8 (294-482)||(6839215-6839404)
chr8 (373-479)||(2067788-2067894)
chr8 (252-415)||(2803268-2803433)
chr8 (294-423)||(14541760-14541900)
chr8 (252-425)||(26438932-26439104)
chr8 (299-482)||(32326680-32326875)
chr8 (294-414)||(156239-156358)
chr8 (295-461)||(30788934-30789111)
chr8 (294-482)||(11257540-11257736)
chr8 (296-423)||(34461596-34461737)
chr8 (372-482)||(11335994-11336098)
chr8 (298-461)||(41790117-41790268)
chr8 (252-356)||(35052427-35052531)
chr8 (296-362)||(3095590-3095656)
chr8 (294-359)||(5588563-5588628)
chr8 (301-414)||(8382501-8382625)
chr8 (301-445)||(41414847-41414992)
chr8 (304-415)||(8107191-8107304)
chr8 (297-362)||(27416502-27416565)
chr8 (380-481)||(32737861-32737961)
chr8 (297-359)||(33870755-33870817)
chr8 (294-362)||(39970323-39970390)
chr8 (416-481)||(24732079-24732144)
chr8 (301-362)||(32661310-32661371)
chr8 (294-362)||(42946120-42946188)
chr8 (294-357)||(32061515-32061578)
chr8 (297-419)||(13108989-13109123)
chr8 (301-359)||(18673189-18673247)
chr8 (375-423)||(27416593-27416641)
chr8 (372-414)||(39970412-39970454)
chr8 (303-344)||(2812817-2812858)
chr8 (374-446)||(5044218-5044290)
chr8 (378-478)||(42709949-42710048)
chr8 (294-337)||(3203325-3203368)
chr8 (392-479)||(5588426-5588512)
chr8 (301-344)||(43938125-43938168)
chr8 (298-344)||(2067725-2067770)
chr8 (293-323)||(11335839-11335869)
chr8 (372-410)||(32661392-32661430)
chr8 (425-477)||(2812916-2812968)
chr8 (252-284)||(11165484-11165516)
chr8 (252-284)||(11168890-11168922)
chr8 (252-284)||(34168126-34168158)
chr8 (252-284)||(39463464-39463496)
[»] scaffold0119 (1 HSPs)
scaffold0119 (299-479)||(1546-1737)
[»] scaffold0047 (1 HSPs)
scaffold0047 (252-423)||(70467-70651)
[»] scaffold0238 (1 HSPs)
scaffold0238 (301-482)||(15995-16186)
[»] scaffold0003 (2 HSPs)
scaffold0003 (294-362)||(321724-321792)
scaffold0003 (372-423)||(321815-321866)
[»] scaffold0189 (1 HSPs)
scaffold0189 (252-415)||(13081-13255)
[»] scaffold0580 (4 HSPs)
scaffold0580 (252-344)||(1597-1691)
scaffold0580 (252-344)||(9336-9430)
scaffold0580 (400-479)||(1689-1768)
scaffold0580 (400-479)||(9428-9507)
[»] scaffold0194 (2 HSPs)
scaffold0194 (294-344)||(8156-8206)
scaffold0194 (413-482)||(8277-8346)
[»] scaffold0886 (1 HSPs)
scaffold0886 (294-482)||(4063-4263)
[»] scaffold0519 (2 HSPs)
scaffold0519 (294-357)||(7791-7852)
scaffold0519 (372-405)||(7732-7765)
[»] scaffold0007 (1 HSPs)
scaffold0007 (380-414)||(158195-158229)
[»] scaffold0758 (1 HSPs)
scaffold0758 (252-285)||(6241-6274)
[»] scaffold0060 (1 HSPs)
scaffold0060 (294-338)||(31623-31667)


Alignment Details
Target: chr5 (Bit Score: 170; Significance: 5e-91; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 14980235 - 14980006
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    ||||||||||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14980235 ctccctccgtttcaaaatgagagtcactttagctaaaaaaatttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 14980136  T
Q  352 actttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatcca 451  Q
    ||||||||||| ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14980135 actttaccctctccaactttt-tctcacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatcca 14980037  T
Q  452 ataattattttattcaatttcttaatctgtg 482  Q
    || ||||||| |||| |||||||||||||||    
T  14980036 atgattatttcattccatttcttaatctgtg 14980006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 166845 - 166604
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    ||||||||||||||||||||||||| |||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  166845 ctccctccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttcca 166746  T
Q  352 actttaccct---------cccca--tcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaag 440  Q
    ||||||||||         | |||  | ||||||||||||||||||||||||||||||| |||||||||||| |||||   || |||||||| |||||||    
T  166745 actttaccctcaataaatactccaacttttttctcacacaattttcaatgcaactttaagtttgtctttttcatataatacaagggcagtttagtaaaag 166646  T
Q  441 tgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||||| || ||| ||||||| |||  ||| |||||||||||    
T  166645 tgttatttctaatgattatttcatttcattccttaatctgtg 166604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 252 - 482
Target Start/End: Original strand, 36660384 - 36660623
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||| ||||||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  36660384 ctcccttcgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttcca 36660483  T
Q  352 actttaccct---------ccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtg 442  Q
    ||||||||||         | ||| |||||||| |||||||||  || ||||||||| ||||||||||||||||||||||| | || ||| |||||||||    
T  36660484 actttaccctcaataaatactccagcttttctctcacaattttttatacaactttaagtttgtctttttcttataaagtaaggacattttagtaaaagtg 36660583  T
Q  443 ttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||| || ||| ||||||| |||  ||| |||||||||||    
T  36660584 ttatgtctaatgattatttcatttcattccttaatctgtg 36660623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 301 - 482
Target Start/End: Complemental strand, 43257998 - 43257815
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatct--tttctcacacaattttcaatgcaacttta 398  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| ||||  || ||  |||||||||||||||||||||||||||||    
T  43257998 aaaatgaatgtcactttacatttccaatataactttaatttttttctttcaactttatcctcttcaactgttttctcacacaattttcaatgcaacttta 43257899  T
Q  399 attttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    | ||||||| ||||||||||||||| |||||||| ||| ||||||||| || ||| ||||||| |||  |||  ||||||||||    
T  43257898 agtttgtctatttcttataaagtaagggcagtttagtataagtgttatgtctaatgattatttcatttcattctttaatctgtg 43257815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 252 - 479
Target Start/End: Complemental strand, 4011831 - 4011618
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||| |||||||||||||||||||||||||       || |||| |||||||| |||||||||||||||| |||||||||||||||||| ||||||    
T  4011831 ctccctccttttcaaaatgagtgtcactttagctaaaaaaatt-gttttaaaatgaacgtcactttacatttccgatacaactttaatttttttcttcca 4011733  T
Q  352 actttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatcca 451  Q
    |||||             |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||| ||| | ||||  ||||||||||    
T  4011732 acttt-------------tttctcacacaattttcaatgcaactttaattttatctttttcttataaaataagggcattttagaaaaaacgttatatcca 4011646  T
Q  452 ataattattttattcaatttcttaatct 479  Q
    || ||||||| |||| ||||||||||||    
T  4011645 atgattatttgattccatttcttaatct 4011618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 294 - 482
Target Start/End: Original strand, 31889741 - 31889917
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttcctt-ccaactttaccctccccatcttttctcacacaattttcaatgca 392  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||  || |||||||| |             |||||||||||||||||||||    
T  31889741 ttgtttcaaaataaatgtcactttacatttccaatacaactttaatttttttttttccaacttttc-------------tctcacacaattttcaatgca 31889827  T
Q  393 actttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||||||||||||||||||||||||| |||||||| || |||  ||||||| |||||||||||| |||| |||||||||||||||    
T  31889828 actttaattttgtctttttcttataaagtaagggcagtttagtgaaaacgttatattcaataattatttcattccatttcttaatctgtg 31889917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 294 - 482
Target Start/End: Original strand, 34919752 - 34919933
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 393  Q
    ||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||||| || |||| || |||||||| ||||||| | ||         
T  34919752 ttgtttcaaaatgaatgtcactttacattcctaatataactttaatttttttcttccaacttgactctcctcaacttttctctcacaattattaa----- 34919846  T
Q  394 ctttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
      |||| ||||||||||||||||||||||| |||||||| |||||| || ||| |||||| |||||||||||  ||| |||||||||||    
T  34919847 --ttaagtttgtctttttcttataaagtaagggcagtttagtaaaattgctatgtccaatgattattttatttcattccttaatctgtg 34919933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 294 - 479
Target Start/End: Complemental strand, 7388335 - 7388150
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 393  Q
    |||||| |||||||||||||||||| |||| |||||||| ||||||||||  |||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  7388335 ttgttttaaaatgaatgtcactttatattttcaatacaattttaatttttatcttccatctttatcctcttcaacttttctctcacaattttcaatgcaa 7388236  T
Q  394 ctttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||| ||| ||||||||||||||| ||| | || ||| |||||| | |||| || ||| |||||||||||  |||| |||||||    
T  7388235 ctttaaatttatctttttcttataaaataaggacaatttagtaaaaatattatgtctaatgattattttatttcatttattaatct 7388150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 294 - 482
Target Start/End: Complemental strand, 31557489 - 31557295
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcccca-----tcttttctcacacaattttcaa 388  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||   ||   |     | || |||||||||||||||||    
T  31557489 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaatttttttcttccaactttattttcaataaatactattctctcacacaattttcaa 31557390  T
Q  389 tgcaactttaattttgtctttttcttataaagtaaa-ggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||||| |||||||||||||||||||||||| ||  ||||  ||||||| ||||||  ||| ||||||| |||| |||||||||| ||||    
T  31557389 tgcaactttaagtttgtctttttcttataaagtaaagggttgtttactaaaagtattatatttaatgattatttcattctatttcttaatatgtg 31557295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 382 - 482
Target Start/End: Complemental strand, 4967546 - 4967446
Alignment:
Q  382 ttttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgt 481  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||| |||||||||||| ||||||| |||| ||||||||||||||    
T  4967546 ttttcaatgcaactttaattttgtcttttttttataaagtaagggcagtttagtaaaagcgttatatccaatgattatttcattccatttcttaatctgt 4967447  T
Q  482 g 482  Q
    |    
T  4967446 g 4967446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 297 - 483
Target Start/End: Original strand, 16886087 - 16886268
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttc--tcacacaattttcaatgcaac 394  Q
    |||||||||||| ||| |||| ||||| |||||||||||||||||||| ||||||||||||||||| ||| ||||||  |||||||||||||||||||||    
T  16886087 tttcaaaatgaacgtcgctttgcattttcaatacaactttaatttttttcttccaactttaccctctccaacttttctatcacacaattttcaatgcaac 16886186  T
Q  395 tttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtgc 483  Q
    |||||        |||| ||||||||||| |||||||| ||||| ||||||  || ||||||||||| |||  ||| ||| ||||||||    
T  16886187 tttaa-------gttttgttataaagtaagggcagtttagtaaatgtgttacgtctaataattatttcatttcattccttgatctgtgc 16886268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 301 - 482
Target Start/End: Original strand, 15400177 - 15400370
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctcaca--caattttcaat 389  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||          | | |||||||| ||  |||||| ||||    
T  15400177 aaaatgaatgtcactttacatttccaatacaactttaattttcttcttccaactttatcctcaataaatactcaaacttttctctcatacaatttccaat 15400276  T
Q  390 gcaactttaattttgtctttttcttataaagtaaaggcagtttg-gtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    | |||||||| |||  ||||||||||||||||||||| | |||  |||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  15400277 gaaactttaagttttcctttttcttataaagtaaagggaattttagtaaaagtgttatatctaataattatttcattcaattttttaatctgtg 15400370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 42329700 - 42329558
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||         |  || ||||    |||||||||    
T  42329700 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttacccttaataaatacttcaacttttctctctcacaca 42329601  T
Q  381 attttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||||| |||||||| ||||||||||||||    
T  42329600 attttcaatgcaactttaagtttgtcttattcttataaagtaa 42329558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 261 - 423
Target Start/End: Complemental strand, 793793 - 793618
Alignment:
Q  261 tttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccc 360  Q
    |||||||||||||||| |||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  793793 tttcaaaatgagtgtcgctttagccaaaaaaatttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactctaccc 793694  T
Q  361 t---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |         |   | ||||    |||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  793693 tcaataaatacttaaacttttctctctcacacaattttcaatgcaactttaagtttgtcttgttcttataaagtaa 793618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 350 - 482
Target Start/End: Complemental strand, 12167700 - 12167565
Alignment:
Q  350 caactttaccctccccatcttttctcacaca---attttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttat 446  Q
    ||||||||||||| ||| |||||||| ||||   ||||||||||||||||||| |||| | |||||||||||||||| |||||||| ||||||||||| |    
T  12167700 caactttaccctctccaacttttctctcacacaaattttcaatgcaactttaagtttgaccttttcttataaagtaagggcagtttagtaaaagtgtttt 12167601  T
Q  447 atccaataattattttattcaatttcttaatctgtg 482  Q
     || ||| ||||||| ||||||||||||||| ||||    
T  12167600 gtctaatgattatttcattcaatttcttaatttgtg 12167565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 301 - 482
Target Start/End: Original strand, 36783361 - 36783553
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctc--acacaattttcaat 389  Q
    ||||| |||||||||||||||||||||||||||| ||||||||| |||| |||||||||||         | ||| ||||||||  ||||||||||||||    
T  36783361 aaaattaatgtcactttacatttccaatacaactctaatttttttcttctaactttacccttagtaaattctccaacttttctctcacacaattttcaat 36783460  T
Q  390 gcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||||||||| |||||||||||| ||  |||||| |||| ||| |||||| |||||| || ||| ||||||| |||  || ||||||||||||    
T  36783461 gcaactttaaatttgtctttttcataacaagtaagggcaatttagtaaaaatgttatgtctaatgattatttcatttcatctcttaatctgtg 36783553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 4751729 - 4751485
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnnt--ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttcctt 348  Q
    ||||||||||||||||||||||||| |||||||        |  ||||||||||||||||||||||||| ||||| ||||||||||||||| |||| |||    
T  4751729 ctccctccgtttcaaaatgagtgtcgctttagcaaaaaaaataattgtttcaaaatgaatgtcactttatatttctaatacaactttaattttttttctt 4751630  T
Q  349 ccaactttaccct---------cccca--tcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaa 437  Q
    |||||||||||||         | |||  | ||||||||||||||||||||| ||||||||| ||||| |||||| ||||||  || ||  |||| ||||    
T  4751629 ccaactttaccctcaataaatactccaacttttttctcacacaattttcaattcaactttaagtttgtttttttcatataaaacaagggttgtttagtaa 4751530  T
Q  438 aagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||| || ||| ||||||| |||  ||| |||||| ||||    
T  4751529 aagtgttatgtctaatgattatttcatttcattccttaatatgtg 4751485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 294 - 453
Target Start/End: Original strand, 27810345 - 27810516
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc--------ccca---tcttttctcacacaat 382  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||| ||||        | ||   | ||||||||||||||    
T  27810345 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttcaactttatcctcaataaatactcaaacttttttctcacacaat 27810444  T
Q  383 tttcaatgcaactttaattttgtc-tttttcttataaagtaaaggcagtttggtaaaagtgttatatccaat 453  Q
    ||||||| ||||||||| ||| || |||||| ||||||  || |||||||| ||||||||||||||| ||||    
T  27810445 tttcaatacaactttaaatttatcttttttcatataaaacaatggcagtttagtaaaagtgttatatgcaat 27810516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 257 - 362
Target Start/End: Complemental strand, 38982336 - 38982231
Alignment:
Q  257 tccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 356  Q
    ||||||||| |||||||||||||||||||        |||||| |||||||||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  38982336 tccgtttcataatgagtgtcactttagctaaaaaaaattgttttaaaatgaatgtcactttatatttccaatacaactttaatttttttctcccaacttt 38982237  T
Q  357 accctc 362  Q
    ||||||    
T  38982236 accctc 38982231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 257 - 359
Target Start/End: Complemental strand, 33585166 - 33585064
Alignment:
Q  257 tccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 356  Q
    ||||||||||||||||||||||||||| |        |||||| |||||||| |||||||||||||| |||||||||||||||||||| |||||||||||    
T  33585166 tccgtttcaaaatgagtgtcactttagataaaaaaaattgttttaaaatgaacgtcactttacattttcaatacaactttaatttttttcttccaacttt 33585067  T
Q  357 acc 359  Q
    |||    
T  33585066 acc 33585064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 466
Target Start/End: Original strand, 39059805 - 39059987
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc-----------cccatcttttctcacacaat 382  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||| ||| ||||||||||||           |  || |||||||| |||||    
T  39059805 ttgtttcaaaatgaatgttgctttacattttcaatacaactttaattttttc-ttctaactttaccctcaataaatactccaaattttttctcatacaat 39059903  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattc 466  Q
    ||||||||||||||||| ||||| |||||| ||||||  || || ||||| ||||||||||||| || ||| ||||||| ||||    
T  39059904 tttcaatgcaactttaagtttgtttttttcatataaaacaagggtagtttagtaaaagtgttatgtctaatgattatttcattc 39059987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 13066712 - 13066780
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  13066712 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaattttttttttccaactttaccctc 13066780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 362
Target Start/End: Complemental strand, 29653668 - 29653600
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  29653668 ttgttgcaaaatgaatgtcattttacatttccaatacaactttaatttttttcttccaactttaccctc 29653600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 423
Target Start/End: Complemental strand, 33822699 - 33822515
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||||||||||||| |||||||||          ||| |||||||||||||||||||||||||| |||||||||||||||||| | ||| ||    
T  33822699 ctccctccgtttcaaaatgagtatcactttagtcaaaaaaaattgattcaaaatgaatgtcactttacattttcaatacaactttaattttgttctttca 33822600  T
Q  352 actttaccct---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||| |         |  || ||||    |||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  33822599 actttaccttcaataaatacttcaacttttctctctcacacaattttcaatgcaactttaagtttgtcttgttcttataaagtaa 33822515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 294 - 446
Target Start/End: Complemental strand, 4742421 - 4742257
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttaccct---------cccca--tcttttctcacacaa 381  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||| |||| ||||||||||||||||         | |||  | |||||||||||||    
T  4742421 ttgtttcaaaatgaatgtcactttatatttctaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacacaa 4742322  T
Q  382 ttttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttat 446  Q
    |||||||| ||||||||| ||||| |||||| ||||||  || ||  |||| |||||||||||||    
T  4742321 ttttcaattcaactttaagtttgtttttttcatataaaacaagggttgtttagtaaaagtgttat 4742257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 4371362 - 4371430
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||||||||||||    
T  4371362 ttgtttcaaaatgaacgtcactttacatttccaatacaactttaatttttttctccaaactttaccctc 4371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 301 - 445
Target Start/End: Original strand, 33693746 - 33693891
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcccca--tcttttctcacacaattttcaatgcaacttta 398  Q
    ||||| |||||||||||||||||  ||||  ||||||||||||| ||||||| |||||| ||| ||  | ||||||||||||||||||||||||||||||    
T  33693746 aaaataaatgtcactttacatttttaatatcactttaatttttttcttccaattttaccttcctcaacttttttctcacacaattttcaatgcaacttta 33693845  T
Q  399 attttgtctttttcttataaagtaaaggcagtttggtaaaagtgtta 445  Q
    |  || |  |||| ||||||| ||| ||||| || ||||||||||||    
T  33693846 agcttattatttttttataaaataagggcag-ttagtaaaagtgtta 33693891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 372 - 482
Target Start/End: Complemental strand, 27652384 - 27652274
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaattt 471  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |  | ||| |||||| ||||||  |   | | |||||||||| ||||    
T  27652384 tctcacacaattttcaatgcaactttaaatttgtctttttcttataaagtaaggttattttagtaaaattgttatgacatttgactattttattccattt 27652285  T
Q  472 cttaatctgtg 482  Q
    |||||||||||    
T  27652284 cttaatctgtg 27652274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 372 - 465
Target Start/End: Complemental strand, 8961099 - 8961007
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttatt 465  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||||||| | ||| |||||| ||||||||||||| || ||| |||||||||||    
T  8961099 tctcacacaattttcattgcaactttaaatttatctttttcttataaaat-aagacagtttagtaaaagtgttatgtctaatgattattttatt 8961007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 34171163 - 34171302
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc--------ccca---tcttttctcacacaat 382  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||| ||        | ||   | || ||||||| |||    
T  34171163 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttt-tttccaactttaccttcaataaatactcaaacttttctctcacagaat 34171261  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  34171262 tttcaatgcaactttaagtttgtcttgttcttataaagtaa 34171302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 294 - 362
Target Start/End: Complemental strand, 4833787 - 4833719
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||||||||||||||||  |||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  4833787 ttgtttcaaaatgaatgttgctttacattttcaatgcaactttaatttttttcttccaactttaccctc 4833719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 362
Target Start/End: Complemental strand, 32963202 - 32963095
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||| ||||||| ||||||||||||||||||| |       |||||||||||||||||  |||||||||||||||||||||||||| ||||||  ||| |    
T  32963202 ctccatccgttttaaaatgagtgtcactttag-tcaaaaagtttgtttcaaaatgaataccactttacatttccaatacaactttattttttt--ttcaa 32963106  T
Q  352 actttaccctc 362  Q
    |||||||||||    
T  32963105 actttaccctc 32963095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 12992063 - 12992129
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||  ||||||||||| ||||    
T  12992063 ttgtttcaaaatgaatgtcattttacatttctaatacaactttaatttttt--ttccaactttatcctc 12992129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 252 - 362
Target Start/End: Original strand, 17674165 - 17674275
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||| |||||||||||||||||||          |||||||||||||||||||||||||| ||| ||||| |||||||||||||| | || |    
T  17674165 ctccctccgttttaaaatgagtgtcactttagtcaaataaaattgtttcaaaatgaatgtcactttacgttttcaataaaactttaattttttacgtcta 17674264  T
Q  352 actttaccctc 362  Q
    |||||| ||||    
T  17674265 actttatcctc 17674275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 297 - 358
Target Start/End: Complemental strand, 32690882 - 32690821
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttac 358  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||  |||||||||    
T  32690882 tttcaaaatgaatgtcactttacatttcaaatacaactttaatttttttctctcaactttac 32690821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 294 - 361
Target Start/End: Original strand, 33741464 - 33741531
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct 361  Q
    ||||||||| |||||||||||||||||||| |||| ||||||| ||||||| |||| |||||||||||    
T  33741464 ttgtttcaatatgaatgtcactttacattttcaatgcaactttcatttttttcttcaaactttaccct 33741531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 297 - 356
Target Start/End: Complemental strand, 41845433 - 41845374
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 356  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| ||| |||||||    
T  41845433 tttcaaaatgaatgtcactttacattttcaatacaattttaatttttttctttcaacttt 41845374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 362
Target Start/End: Original strand, 28640088 - 28640149
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||| || ||||||||||||||    
T  28640088 aaaataaatgtcactttacattttcaattcaactttaatttttttctcccaactttaccctc 28640149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 27658726 - 27658682
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 338  Q
    |||||||||||||||||||||||||||||||||||| ||||||||    
T  27658726 ttgtttcaaaatgaatgtcactttacatttccaatataactttaa 27658682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 29044811 - 29044859
Alignment:
Q  375 cacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||||||    
T  29044811 cacacaattttcaatgcaactttaagtttatcttattcttataaagtaa 29044859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 36296286 - 36296225
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttta 357  Q
    |||||| ||||||||| || |||| ||||||||||||||||||||||||||  |||||||||||    
T  36296286 ttgttttaaaatgaatatcgctttccatttccaatacaactttaatttttt--ttccaacttta 36296225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 29653577 - 29653526
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||  ||||||||||||| |||||||| ||||||||||||||    
T  29653577 tctcacacaatttctaatgcaactttaagtttgtcttgttcttataaagtaa 29653526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 33585038 - 33584987
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||||||||||||||| |||||||| ||| | ||||||||    
T  33585038 tctcacacaattttcaatgcaactttaagtttgtcttgttcatgtaaagtaa 33584987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 7731747 - 7731697
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    |||||| |||||||||||||||||| |||| ||| ||||||||||||||||    
T  7731747 ttgttttaaaatgaatgtcactttatattttcaaaacaactttaatttttt 7731697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 36296196 - 36296150
Alignment:
Q  373 ctcacacaattttcaatgcaactttaattttgtctttttcttataaa 419  Q
    ||||||||||||||||||||||||||| |||||||| ||| ||||||    
T  36296196 ctcacacaattttcaatgcaactttaagtttgtcttgttcctataaa 36296150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 482
Target Start/End: Original strand, 1513072 - 1513177
Alignment:
Q  377 cacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaa 476  Q
    |||||||||||| |||||||||| ||||| ||| |||| |||||||| || ||||||  |||||| |||| |  ||| ||||||| |||  |||||||||    
T  1513072 cacaattttcaaagcaactttaagtttgtttttctcttgtaaagtaagggtagtttgaaaaaagtattatgtttaatgattatttcatttcatttcttaa 1513171  T
Q  477 tctgtg 482  Q
    | ||||    
T  1513172 tttgtg 1513177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 411
Target Start/End: Complemental strand, 4833694 - 4833657
Alignment:
Q  374 tcacacaattttcaatgcaactttaattttgtcttttt 411  Q
    |||||||||||||||||||||||||| |||||||||||    
T  4833694 tcacacaattttcaatgcaactttaagtttgtcttttt 4833657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 297 - 342
Target Start/End: Complemental strand, 8961162 - 8961117
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaatttt 342  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||||    
T  8961162 tttcaaaatggatgtcactttacaattccaatgcaactttaatttt 8961117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 414
Target Start/End: Complemental strand, 38982205 - 38982168
Alignment:
Q  377 cacaattttcaatgcaactttaattttgtctttttctt 414  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  38982205 cacaattttcaatgcaactttaagtttgtctttttctt 38982168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 12167736 - 12167693
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaacttta 337  Q
    |||||| ||||||||||||||| ||||||| |||||||||||||    
T  12167736 ttgttttaaaatgaatgtcactctacattttcaatacaacttta 12167693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 341
Target Start/End: Original strand, 28316712 - 28316759
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattt 341  Q
    |||||||||||| ||||||| |||| |||| |||||||||||||||||    
T  28316712 ttgtttcaaaataaatgtcattttatattttcaatacaactttaattt 28316759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 340
Target Start/End: Complemental strand, 29051659 - 29051620
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaatt 340  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  29051659 aaaatgaatgtcactttacctttctaatacaactttaatt 29051620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 425
Target Start/End: Complemental strand, 32963066 - 32963020
Alignment:
Q  378 acaattttcaatgcaactttaattttgtctttttcttataaagtaaag 425  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||    
T  32963066 acaatttccaatgcaa-tttaagtttgtctttttcttataaagtaaag 32963020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 323
Target Start/End: Complemental strand, 24436615 - 24436585
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacattt 323  Q
    |||||||||||||||||||||||||||||||    
T  24436615 tttgtttcaaaatgaatgtcactttacattt 24436585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 415
Target Start/End: Complemental strand, 32690791 - 32690753
Alignment:
Q  377 cacaattttcaatgcaactttaattttgtctttttctta 415  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  32690791 cacaattttcaatgcaactttaggtttgtctttttctta 32690753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 32158529 - 32158562
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagct 285  Q
    ||||||||||||||||||||||||| ||||||||    
T  32158529 ctccctccgtttcaaaatgagtgtcgctttagct 32158562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 416
Target Start/End: Original strand, 33741556 - 33741597
Alignment:
Q  375 cacacaattttcaatgcaactttaattttgtctttttcttat 416  Q
    |||||||||| |||||||||||||| ||| ||||||||||||    
T  33741556 cacacaatttccaatgcaactttaagtttatctttttcttat 33741597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 10345130 - 10345098
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  10345130 ctccctccgtttcaaaatgagtgtcgctttagc 10345098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 42103977 - 42104009
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  42103977 ctccctccgtttcaaaatgagtgtcgctttagc 42104009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 4e-73; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 255 - 479
Target Start/End: Original strand, 52732555 - 52732782
Alignment:
Q  255 cctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaac 353  Q
    ||||||||||||||||||||||||||||| |        |||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  52732555 cctccgtttcaaaatgagtgtcactttagttaaaaaaaattgttttaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaac 52732654  T
Q  354 tttaccctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatcca 451  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||    
T  52732655 tttaccctccccaacttttctctcacacaattttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagtgttatatcca 52732754  T
Q  452 ataattattttattcaatttcttaatct 479  Q
    || ||||||| |||| |||| |||||||    
T  52732755 atgattatttcattccattttttaatct 52732782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 43421314 - 43421082
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||| |||||||||||| ||||||||| |||||        |||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||    
T  43421314 ctccttccgtttcaaaacgagtgtcaccttagccaaaaatatttgtttcaaaatgaaggtcactttacatttcccatacaactttaatttttttcttcca 43421215  T
Q  352 actttaccctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatc 449  Q
    ||||||||||| |||  |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||  ||| ||| |||||||| |||||||    
T  43421214 actttaccctctccaggttttctctcacacaatattcaatgcaactttaattttgtctttttcttataaagtaagagcaatttagtaaaagtattatatc 43421115  T
Q  450 caataattattttattcaatttcttaatctgtg 482  Q
    |||| ||||||| |||| |||||||||| ||||    
T  43421114 caatgattatttcattccatttcttaatttgtg 43421082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 249 - 477
Target Start/End: Original strand, 51930550 - 51930765
Alignment:
Q  249 ttgctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttcctt 348  Q
    ||||||||||||||||||||||||||||||||||| |       |||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||    
T  51930550 ttgctccctccgtttcaaaatgagtgtcactttagttaaaaaaatttgtttcaaaatgaatgtcgctttacatttccaatacaattttaatttttttctt 51930649  T
Q  349 ccaactttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatat 448  Q
    |||||||| |             ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||| |||||||    
T  51930650 ccaacttttc-------------tctcacacaattttcaatgcaactttaattttgtcattttcttataaagtaagggcagtttagtaaaagcgttatat 51930736  T
Q  449 ccaataattattttattcaatttcttaat 477  Q
    ||||| ||||||| |||| ||||| ||||    
T  51930737 ccaattattatttcattccatttcataat 51930765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 318 - 480
Target Start/End: Original strand, 34360033 - 34360197
Alignment:
Q  318 acatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttctta 415  Q
    |||||| ||||||||||||| |||||| ||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||| |||||||||||||||    
T  34360033 acattttcaatacaactttattttttttcttccaactttaccctctccaacttttctctcacacaattttcaatgcaactttaagtttgtctttttctta 34360132  T
Q  416 taaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctg 480  Q
    |||||||| |||||||| |||||||||||||||| ||| ||||||| |||  ||| |||||||||    
T  34360133 taaagtaagggcagtttagtaaaagtgttatatctaatgattatttcatttcattccttaatctg 34360197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 294 - 461
Target Start/End: Complemental strand, 15501302 - 15501133
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacacaattttcaatgc 391  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||  || ||||  |||||||||||||| |||||    
T  15501302 ttgtttgaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaacattactctcttcaacttttctctcacacaatttttaatgc 15501203  T
Q  392 aactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattt 461  Q
    |||||||| ||||| ||||||||||||||||| |||||||| |||||| |||||| || ||| |||||||    
T  15501202 aactttaagtttgtatttttcttataaagtaagggcagtttagtaaaaatgttatgtctaatgattattt 15501133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 255 - 482
Target Start/End: Original strand, 21045113 - 21045327
Alignment:
Q  255 cctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaac 353  Q
    ||||||||||||||||||||||| || |||        ||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  21045113 cctccgtttcaaaatgagtgtca-ttgagccaaaaaaatttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaac 21045211  T
Q  354 tttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaat 453  Q
    ||| |             |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||  |||||||||||    
T  21045212 ttttc-------------tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttaataaaagccttatatccaat 21045298  T
Q  454 aattattttattcaatttcttaatctgtg 482  Q
     ||||||| |||| ||| |||||||||||    
T  21045299 gattatttcattccattccttaatctgtg 21045327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 252 - 482
Target Start/End: Original strand, 44855195 - 44855438
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||| ||||||||||||||||||||| ||||||         ||||||| |||| |||||||||||||||||||||||||||||||| ||||  ||||||    
T  44855195 ctccatccgtttcaaaatgagtgtcattttagcaaaaaaaaattgtttcgaaataaatgtcactttacatttccaatacaactttaagttttctcttcca 44855294  T
Q  352 a--ctttaccctcc---------ccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaa 438  Q
    |  ||||||||||          ||| ||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||    
T  44855295 attctttaccctcaataaataatccaacttttctctcacacaattttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaa 44855394  T
Q  439 agtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    || ||||||| |||| ||||||| |||| |||||||||| ||||    
T  44855395 agcgttatattcaatgattatttcattctatttcttaatttgtg 44855438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 301 - 482
Target Start/End: Original strand, 54512034 - 54512217
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgcaacttta 398  Q
    ||||||||| |||||||||||||  |||| |||||||||||||  |||||||||||| |||| ||| ||||||||  ||||||| |||||||||||||||    
T  54512034 aaaatgaatatcactttacatttttaatataactttaatttttatcttccaactttatcctctccaacttttctctcacacaatgttcaatgcaacttta 54512133  T
Q  399 attttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||||||| ||||||||||||||||  ||||||| ||||||  |||||||||||| ||||||| |||  |||||||||| ||||    
T  54512134 attttgtcattttcttataaagtaagagcagtttagtaaaaacgttatatccaattattatttcatttcatttcttaatatgtg 54512217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 477
Target Start/End: Original strand, 19849079 - 19849273
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaat 382  Q
    |||||| ||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||          ||| ||||||||  |||||||    
T  19849079 ttgttttaaaatgaatttcactttacaattccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcacacaat 19849178  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaat 477  Q
    ||||||||||||||||| ||||| ||||||||||||||| | |||||||| |||||| ||||||||  |||||||||||||||  ||||||||||    
T  19849179 tttcaatgcaactttaagtttgtttttttcttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 19849273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 31817373 - 31817157
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    ||||||||||||||||||||||||||| |||||        |||||||||||||||||||||||||||||||||||| |||||||  |||||| ||||||    
T  31817373 ctccctccgtttcaaaatgagtgtcacattagccaaaaaaatttgtttcaaaatgaatgtcactttacatttccaatgcaacttt--tttttttcttcca 31817276  T
Q  352 actttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtcttttt-cttataaagtaaaggcagtttggtaaaagtgttatatcc 450  Q
    ||||| |             |||||||||||||||||||||||||||||||||| ||||| |||||||||||| || ||||| ||||||  |||||||||    
T  31817275 acttttc-------------tctcacacaattttcaatgcaactttaattttgtattttttcttataaagtaagggaagtttagtaaaaacgttatatcc 31817189  T
Q  451 aataattattttattcaatttcttaatctgtg 482  Q
    ||| ||||||| |||| |||||||||| ||||    
T  31817188 aatgattatttcattccatttcttaatttgtg 31817157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 256 - 475
Target Start/End: Original strand, 50072238 - 50072438
Alignment:
Q  256 ctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactt 355  Q
    |||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  50072238 ctccgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactt 50072337  T
Q  356 taccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataa 455  Q
                 ||||||||||||||||||||||||||||||||||||      ||||||||||||| |||||||| ||||||  |||||||||||| |    
T  50072338 -------------ttttctcacacaattttcaatgcaactttaattttg------tcttataaagtaagggcagtttagtaaaaacgttatatccaatga 50072418  T
Q  456 ttattttattcaatttctta 475  Q
    |||||| |||| ||||||||    
T  50072419 ttatttcattccatttctta 50072438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 257 - 482
Target Start/End: Complemental strand, 36805637 - 36805408
Alignment:
Q  257 tccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 356  Q
    |||||||||||||||||||| ||||||||        |||||| |||||| |||| | ||||||||| |||||||||||||||||||| |||||||||||    
T  36805637 tccgtttcaaaatgagtgtcgctttagctaaaaaatattgttttaaaatgtatgttattttacatttgcaatacaactttaatttttttcttccaacttt 36805538  T
Q  357 accctccc--catctttt--ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaa 452  Q
    | |||| |  || |||||  ||||||||||||||||| ||||||||| |||||||||||| |||||| ||| | |||||| ||||||||||||| || ||    
T  36805537 aacctcactccaacttttttctcacacaattttcaatacaactttaagtttgtctttttcatataaactaaggacagtttagtaaaagtgttatgtctaa 36805438  T
Q  453 taattattttattcaatttcttaatctgtg 482  Q
    | ||||||| |||  ||| |||||||||||    
T  36805437 tgattatttcatttcattccttaatctgtg 36805408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 294 - 482
Target Start/End: Complemental strand, 32141119 - 32140944
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 393  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |             ||||||||||||||||||||||    
T  32141119 ttgtttcaaaatgaatgccactttacatttccaatacaactttaatttttttcttccaacttttc-------------tctcacacaattttcaatgcaa 32141033  T
Q  394 ctttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
     ||||  ||||||||||  ||||||||||  |||||||| ||||||||||||| || ||| ||||||| ||||||||||||||||||||    
T  32141032 atttatgtttgtcttttgtttataaagtaggggcagtttagtaaaagtgttatgtctaatgattatttcattcaatttcttaatctgtg 32140944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 293 - 479
Target Start/End: Original strand, 30022062 - 30022258
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacacaa 381  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||         |  || ||||  ||||||||||    
T  30022062 tttgtttcaaaatgaatgttacttgacatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctctcacacaa 30022161  T
Q  382 ttttcaatgcaactttaattttgtctttttcttata-aagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||||||||||| | ||||||||||||||||| |||  |||| ||||| |||||||||||||||  ||| |||||||||||  ||| ||||||||    
T  30022162 ttttcaatgcaactttgagtttgtctttttcttatacaag--aaggtagtttagtaaaagtgttatatataatgattattttatttcattccttaatct 30022258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 294 - 478
Target Start/End: Complemental strand, 39671238 - 39671068
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 393  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||| ||| |||||| |             ||||||||||||||||||||||    
T  39671238 ttgtttcaaaatgaatgtcgttttacatttccaatacaactttaattttttctttc-aacttttc-------------tctcacacaattttcaatgcaa 39671153  T
Q  394 ctttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatc 478  Q
    |||||| ||||| |||||||||||||||||||| ||||| ||||| ||||||| || ||| || |||| |||| |||||||||||    
T  39671152 ctttaagtttgtttttttcttataaagtaaaggtagtttagtaaatgtgttatgtctaatgataatttcattccatttcttaatc 39671068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 301 - 479
Target Start/End: Complemental strand, 45520607 - 45520419
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctcaca--caattttcaat 389  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||         | | | |||||||| ||  ||||||| |||    
T  45520607 aaaatgaatgtcactttacattttcaatacaactttaattttttc-ttccaactttatccttgataaatactcaaacttttctctcatacaatttttaat 45520509  T
Q  390 gcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||||| |||||||| ||||||||| |||| ||||| || ||||||||||||| || ||| |||||||||||| ||||||||||||    
T  45520508 gcaactttaagtttgtcttattcttataatgtaagggcagcttagtaaaagtgttatgtctaatgattattttattccatttcttaatct 45520419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 24259606 - 24259748
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 380  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||         | ||| ||||    |||||||||    
T  24259606 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 24259705  T
Q  381 attttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  24259706 attttcaatgcaactttaagtttgtcattttcttataaagtaa 24259748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 294 - 461
Target Start/End: Original strand, 37445655 - 37445833
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttct--cacacaat 382  Q
    |||||| ||||||||||||| |||||||||  ||||||||||||||||||| |||||||||||||||||          | |  ||||||  |||| |||    
T  37445655 ttgttttaaaatgaatgtcattttacatttttaatacaactttaatttttttcttccaactttaccctcaataaatattcaaatttttctttcacataat 37445754  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattt 461  Q
    ||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| || ||| |||||||    
T  37445755 ttttaatgcaactttaaatttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattattt 37445833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 383 - 482
Target Start/End: Complemental strand, 56423056 - 56422957
Alignment:
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||||| ||||||| |||||||||||| ||||||| |||| |||||||||||||||    
T  56423056 tttcaatgcaattttaatttcgtctttttcttataaagtaaagacagtttagtaaaagcgttatatccaatgattatttcattcgatttcttaatctgtg 56422957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 294 - 482
Target Start/End: Original strand, 22212336 - 22212535
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatc--ttttctcacacaat 382  Q
    |||||| |||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||         | ||| |  ||||||||||||||    
T  22212336 ttgttttaaaatgaatgtcaccttacatttccaatataactttaatttttttcttccaactttaccctcaataaatactccaacatttttctcacacaat 22212435  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||| ||||||||| ||||  |||||  ||||||  ||||||||||| ||||||||||||| || ||| ||||||| |||  ||| |||||| ||||    
T  22212436 tttcaatacaactttaagtttgagttttttatataaaacaaaggcagttttgtaaaagtgttatgtctaatgattatttcatttcattccttaatatgtg 22212535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 252 - 362
Target Start/End: Original strand, 29840028 - 29840139
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttcc 350  Q
    |||||||||||||||||||| ||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||    
T  29840028 ctccctccgtttcaaaatgactgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttctccc 29840127  T
Q  351 aactttaccctc 362  Q
    ||||||||||||    
T  29840128 aactttaccctc 29840139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 363
Target Start/End: Original strand, 6462004 - 6462073
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc 363  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6462004 ttgtttcaaaatgaatgtcgctttacatttccaatacaactttaatttttttcttccaactttaccctcc 6462073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 294 - 449
Target Start/End: Original strand, 35928486 - 35928650
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctcacacaattt 384  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||         |  || | |||||  ||||||||    
T  35928486 ttgtttcaaaataaatatcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactgcaacgtttctttcacaattt 35928585  T
Q  385 tcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatc 449  Q
    ||||||||| ||||| ||| ||||||||||||||||| | |||| ||| ||||||||| ||||||    
T  35928586 tcaatgcaattttaagtttatctttttcttataaagtcatggcaatttagtaaaagtgatatatc 35928650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 257 - 361
Target Start/End: Original strand, 28116203 - 28116307
Alignment:
Q  257 tccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 356  Q
    |||||||||||||||||||| |||||||         || ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28116203 tccgtttcaaaatgagtgtcgctttagccaaaaaaaattatttcaaaataaatgtcactttacatttccaatacaactttaatttttttcttccaacttt 28116302  T
Q  357 accct 361  Q
    |||||    
T  28116303 accct 28116307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 17499874 - 17499732
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 380  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||         | | | ||||    ||||| |||    
T  17499874 ttgtttcaaaatgaatgtcgctttacatttccaatgcaattttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcataca 17499775  T
Q  381 attttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  17499774 attttcaatgcaactttaagtttgtctttttcttataaagtaa 17499732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 31941553 - 31941695
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatct----tttctcacaca 380  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||         | ||| ||    | ||||||| |    
T  31941553 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaactattctctctcacata 31941652  T
Q  381 attttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||||| |||||||| ||||||||||||||    
T  31941653 attttcaatgcaactttaagtttgtcttgttcttataaagtaa 31941695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 297 - 479
Target Start/End: Original strand, 11835105 - 11835295
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctcacacaattttca 387  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||| ||| ||| |||||| ||          | | ||| ||||||||||||||||    
T  11835105 tttcaaaatgaatgtcactttacatttttaatataactttaatttttttctttcaaatttaccttcaataaatactcaaccttctctcacacaattttca 11835204  T
Q  388 atgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||||||| ||| || |||||||||||| || ||| |||||  ||||||||||||  | ||||||||||| |||  ||||||||||||    
T  11835205 atgcaactttaagtttatc-ttttcttataaactataggtagtttaataaaagtgttatgcctaataattatttcatttcatttcttaatct 11835295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 293 - 423
Target Start/End: Original strand, 47321138 - 47321282
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaactttaccct---------ccccatcttttctca----ca 378  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||         | | | |||||||||    ||    
T  47321138 tttgttttaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactctaacttttctcactcgca 47321237  T
Q  379 caattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  47321238 caattttcaatgcaactttaaggttgtctttttcttataaagtaa 47321282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 294 - 482
Target Start/End: Complemental strand, 56556410 - 56556237
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttaccctccccatcttttctcacacaattttcaatgca 392  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||             || ||||||||||||||||||| |    
T  56556410 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactt-------------ttctctcacacaattttcaatgta 56556324  T
Q  393 actttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |  |||| ||||| |||||||||||||| || |  | ||| ||||||||||||| ||   |||| |||| |||||||| |||||||||||    
T  56556323 atgttaagtttgtatttttcttataaagcaaggataatttagtaaaagtgttatgtc---taatgatttcattcaattccttaatctgtg 56556237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 359
Target Start/End: Complemental strand, 19282567 - 19282501
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttacc 359  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  19282567 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttacc 19282501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 372 - 482
Target Start/End: Original strand, 34096100 - 34096210
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaattt 471  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||  || ||| ||||||| |||  ||||    
T  34096100 tctcacacaattttcaatgaaactttaagtttgtctttttcttataaagtaagggcaatttagtaaaagtgttaagtctaatgattatttcatttcattt 34096199  T
Q  472 cttaatctgtg 482  Q
     ||||| ||||    
T  34096200 tttaatttgtg 34096210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 301 - 414
Target Start/End: Original strand, 31987306 - 31987430
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctcacaca--attttcaat 389  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||          ||| |||||||| | ||  |||||||||    
T  31987306 aaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcgcataattttcaat 31987405  T
Q  390 gcaactttaattttgtctttttctt 414  Q
    |||||||||| ||||||||||||||    
T  31987406 gcaactttaaatttgtctttttctt 31987430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 293 - 482
Target Start/End: Original strand, 34124289 - 34124491
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacac 379  Q
    ||||||| |||||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||||         | | | ||||    ||||||||    
T  34124289 tttgttttaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcacac 34124388  T
Q  380 aattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||| |  | ||| |||||| ||||||  |   | | || ||||||||||||||||||||    
T  34124389 aattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaatct 34124488  T
Q  480 gtg 482  Q
    |||    
T  34124489 gtg 34124491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 45889559 - 45889700
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc----acaca 380  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||| ||||| ||||| |||||||||||          ||| ||||||||    |||||    
T  45889559 ttgtttcaaaatgaatgtcgctt-acattttcaatacaactttaacttttttcttcctactttaccctcaataaatactccaacttttctctctcacaca 45889657  T
Q  381 attttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||||| ||||| |||||||||||||||||    
T  45889658 attttcaatgcaactttaagtttgtttttttcttataaagtaa 45889700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 294 - 362
Target Start/End: Complemental strand, 51434414 - 51434346
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||| |||||||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  51434414 ttgttttaaaatgaatgtcgctttacatttctaatgcaactttaattttttccttcaaactttaccctc 51434346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 30492732 - 30492791
Alignment:
Q  303 aatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||    
T  30492732 aatgaatgtcactttacattttcaatacaactttaatttttttctcccaactttaccctc 30492791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 372 - 423
Target Start/End: Original strand, 54233902 - 54233953
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  54233902 tctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaa 54233953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 376 - 482
Target Start/End: Original strand, 42672477 - 42672583
Alignment:
Q  376 acacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttctta 475  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||   | ||||| ||||||||||||| || ||| ||||||| |||  ||| ||||    
T  42672477 acacaattttcaatacaactttaaatttgtctttttcttataaagtatgagtagtttagtaaaagtgttatgtctaatgattatttcattatattcctta 42672576  T
Q  476 atctgtg 482  Q
    || ||||    
T  42672577 atttgtg 42672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 45903559 - 45903501
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactt 355  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||    
T  45903559 tttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctaccaactt 45903501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 414
Target Start/End: Original strand, 38692408 - 38692516
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgca 392  Q
    ||||||| ||||||||||||||||||||||| ||||  |||||||||||||| || |||||||             || |||| ||||||||||||||||    
T  38692408 tttgttttaaaatgaatgtcactttacattttcaattaaactttaatttttttctcccaactt-------------ttctctcgcacaattttcaatgca 38692494  T
Q  393 actttaattttgtctttttctt 414  Q
    ||||||||||||||||||||||    
T  38692495 actttaattttgtctttttctt 38692516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 372 - 479
Target Start/End: Original strand, 3093433 - 3093539
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaattt 471  Q
    ||||||||||||| | |||||||||||| ||| | |||||||||||||| || | || |||  | |||||||||| || ||| |||||||||||||||||    
T  3093433 tctcacacaatttccgatgcaactttaaatttct-tttttcttataaaggaaggacaatttaatgaaagtgttatgtctaatgattattttattcaattt 3093531  T
Q  472 cttaatct 479  Q
    ||||||||    
T  3093532 cttaatct 3093539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 293 - 424
Target Start/End: Original strand, 6510112 - 6510254
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctc--acacaa 381  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||| ||||| ||  ||||||||||||         | ||| ||||||||  ||||||    
T  6510112 tttgtttcaaaataaatgtcactttatattttcaatacaactttaacttttttctctcaactttaccctcaataaatactccaccttttctcttacacaa 6510211  T
Q  382 ttttcaatgcaactttaattttgtctttttcttataaagtaaa 424  Q
    |||| |||| || ||||| ||||||||||| ||||||||||||    
T  6510212 tttttaatgtaattttaagtttgtctttttattataaagtaaa 6510254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 478
Target Start/End: Complemental strand, 38761898 - 38761788
Alignment:
Q  368 cttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattca 467  Q
    |||||||| |||||||||||| | |||||||| | ||||||| ||| ||||||||| ||   ||| ||||||||||||| || | ||||||||| ||||     
T  38761898 cttttctctcacaattttcaaggtaactttaagtgtgtctttctctaataaagtaagggtgatttagtaaaagtgttatgtctattaattatttaattct 38761799  T
Q  468 atttcttaatc 478  Q
    |||||||||||    
T  38761798 atttcttaatc 38761788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 344
Target Start/End: Complemental strand, 17317999 - 17317950
Alignment:
Q  295 tgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  17317999 tgtttcaaactgaatgtcacattacatttccaatacaactttaatttttt 17317950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 341
Target Start/End: Complemental strand, 1868255 - 1868208
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattt 341  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||    
T  1868255 ttgtttcaaaatgaatgtcactttacattttcaatgcaactttaattt 1868208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 4408243 - 4408192
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||| |||||    
T  4408243 tctcacacaattttcaatgcaattttaagtttgtctttttcttatatagtaa 4408192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 6232192 - 6232141
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  6232192 tttgtttcaaaataaatgtcaatttacattttcaatacaactttaatttttt 6232141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 415
Target Start/End: Complemental strand, 32141280 - 32141163
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttaccctcccca--tcttttctcacacaattttcaatg 390  Q
    ||||||||||||||| ||||||| | ||||  ||||||||||||||| |||| ||||||||||||||||| |||  ||||| ||||||        ||||    
T  32141280 ttgtttcaaaatgaacgtcacttcatattttgaatacaactttaattttttttcttccaactttaccctctccaactctttcctcaca-------taatg 32141188  T
Q  391 caactttaattttgtctttttctta 415  Q
    ||||||||| |||||||||||||||    
T  32141187 caactttaagtttgtctttttctta 32141163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 51434323 - 51434272
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||||||||||| || || ||||||||||||||||||||    
T  51434323 tctcacacaattttcaatgcaacttaaagttagtctttttcttataaagtaa 51434272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 476
Target Start/End: Complemental strand, 29289959 - 29289852
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtct---ttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaa 468  Q
    |||||||||||||||||||||| ||||| |||||||   |||| |||||||||||||||  |||  ||||| | |||| || ||| ||||||| |||| |    
T  29289959 tctcacacaattttcaatgcaattttaagtttgtctttttttttttataaagtaaaggcgatttattaaaaatattatgtctaatgattatttcattcca 29289860  T
Q  469 tttcttaa 476  Q
    ||||||||    
T  29289859 tttcttaa 29289852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 362
Target Start/End: Original strand, 44835341 - 44835398
Alignment:
Q  306 gaatgtcactttacatttccaatacaactttaattttttccttcc-aactttaccctc 362  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||    
T  44835341 gaatatcactttacatttcgaatacaactttaatttttttcttccaaactttaccctc 44835398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 297 - 354
Target Start/End: Original strand, 54233844 - 54233900
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaact 354  Q
    |||||||||||||| | |||||||||| |||||||||||||||||||| |||||||||    
T  54233844 tttcaaaatgaatgccgctttacattttcaatacaactttaatttttt-cttccaact 54233900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 54091953 - 54092021
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||| ||||||||||||| |||| ||||  ||||||||||||||||||| ||  |||||||||||||    
T  54091953 ttgttttaaaatgaatgtcaatttagatttttaatacaactttaatttttttctctcaactttaccctc 54092021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 215
Target Start/End: Original strand, 31514710 - 31514749
Alignment:
Q  176 ttattattaattaaagtgacattaaatgtcattttacaac 215  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  31514710 ttattattgattaaagtgacattaaatgtcattttacaac 31514749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 6231652 - 6231702
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    ||||||||||||||||||||||||| ||||  | |||||||||||||||||    
T  6231652 ttgtttcaaaatgaatgtcactttatatttatagtacaactttaatttttt 6231702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 29290040 - 29289982
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    ||||| |||||||||||| |||| ||||||||||| |||||||| |||| |||||||||    
T  29290040 aaaattaatgtcactttatattttcaatacaacttcaatttttttcttcaaactttacc 29289982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Complemental strand, 34534157 - 34534111
Alignment:
Q  374 tcacacaattttcaatgcaac-tttaattttgtctttttcttataaa 419  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  34534157 tcacacaattttcaatgcaacttttaagtttgtctttttcttataaa 34534111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 4408335 - 4408286
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttt 343  Q
    ||||||||||||||||||| |||||||||  |||| ||||||||||||||    
T  4408335 ttgtttcaaaatgaatgtcgctttacattctcaatgcaactttaattttt 4408286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 6462102 - 6462151
Alignment:
Q  374 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||| |||||||||||||||| ||||| || ||||||||||||||    
T  6462102 tcacacaatattcaatgcaactttaagtttgttttgttcttataaagtaa 6462151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 34096010 - 34096079
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaactttaccctc 362  Q
    ||||||||||| |||||||| |||||||||| ||||||| ||||| ||||||  || |||||||||||||    
T  34096010 ttgtttcaaaacgaatgtcaatttacatttctaatacaattttaattttttttttttcaactttaccctc 34096079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 361
Target Start/End: Original strand, 55126494 - 55126559
Alignment:
Q  296 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct 361  Q
    |||| ||||||||||||| |||| |||| |||||||||||||||||||  |||| |||| ||||||    
T  55126494 gttttaaaatgaatgtcattttaaattttcaatacaactttaatttttctcttctaactctaccct 55126559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 317
Target Start/End: Original strand, 4505293 - 4505358
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcacttt 317  Q
    ||||||||||||||||||||||||| |||||||         ||||||||||||||||||||||||    
T  4505293 ctccctccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcacttt 4505358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 28116334 - 28116382
Alignment:
Q  375 cacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||| || |||||||| |||||||| ||||||||||||||    
T  28116334 cacacaattttcagtgtaactttaagtttgtcttattcttataaagtaa 28116382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 479
Target Start/End: Complemental strand, 45903441 - 45903377
Alignment:
Q  415 ataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||||  |||||||  |||||| |||||||||||| ||||||| |||| ||||||||||||    
T  45903441 ataaagtaagagcagtttaataaaagcgttatatccaatgattatttcattctatttcttaatct 45903377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 362
Target Start/End: Complemental strand, 55548380 - 55548313
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||||||||| | ||||||||||||||| |||| |||||||||||| ||  |||||||||| |||||    
T  55548380 ttgtttcaaaataagtgtcactttacattttcaatgcaactttaatttctt-tttccaactttgccctc 55548313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 285
Target Start/End: Original strand, 34359977 - 34360012
Alignment:
Q  250 tgctccctccgtttcaaaatgagtgtcactttagct 285  Q
    |||| |||||||||||||||||||||||||||||||    
T  34359977 tgcttcctccgtttcaaaatgagtgtcactttagct 34360012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 423
Target Start/End: Original strand, 55126587 - 55126634
Alignment:
Q  376 acacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||  ||||||||||| |||||||| ||||||||||||||    
T  55126587 acacaattttccttgcaactttaagtttgtcttattcttataaagtaa 55126634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 482
Target Start/End: Complemental strand, 17317910 - 17317805
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaattt 471  Q
    |||||||||||||||||||||     || |||||| ||||||||||||||||  | ||||| ||||||| |  || || ||| |||||||||||  ||||    
T  17317910 tctcacacaattttcaatgca-----aaatttgtccttttcttataaagtaagcgtagtttagtaaaagagcaatgtctaatgattattttattttattt 17317816  T
Q  472 cttaatctgtg 482  Q
     ||||||||||    
T  17317815 tttaatctgtg 17317805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 51737367 - 51737280
Alignment:
Q  393 actttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||| ||||||||||||  ||||||||| || | ||| ||||||||||||| || ||| ||||||| |||| ||| |||||| ||||    
T  51737367 actttaagtttgtctttttc--ataaagtaagggtaatttagtaaaagtgttatgtctaattattatttcattctattccttaatttgtg 51737280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 31941792 - 31941760
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  31941792 ctccctccgtttcaaaatgagtgtcgctttagc 31941760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 39985056 - 39985024
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  39985056 ctccctccgtttcaaaatgagtgtcgctttagc 39985024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 56373493 - 56373525
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    |||| ||||||||||||||||||||||||||||    
T  56373493 ctccatccgtttcaaaatgagtgtcactttagc 56373525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 6e-72; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 259 - 482
Target Start/End: Complemental strand, 26965688 - 26965463
Alignment:
Q  259 cgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttac 358  Q
    ||||| ||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  26965688 cgttttaaaatgagtgtcactttagccaaaaaatattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttac 26965589  T
Q  359 cctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataat 456  Q
    |||| ||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||| ||    
T  26965588 cctctccaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaagcgttatatccaatgat 26965489  T
Q  457 tattttattcaatttcttaatctgtg 482  Q
    ||||| |||  |||||||||||||||    
T  26965488 tatttcattttatttcttaatctgtg 26965463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 295 - 482
Target Start/End: Complemental strand, 27483337 - 27483148
Alignment:
Q  295 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacacaattttcaatgca 392  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||  ||||||| |||||||||||||    
T  27483337 tgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctctccaacttttctctcacataattttcaatgca 27483238  T
Q  393 actttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||| ||||||||||||||||||||||| || | ||| ||||||||||||| || ||| ||||||| |||  ||| |||||| ||||    
T  27483237 actttaagtttgtctttttcttataaagtaagggaaatttagtaaaagtgttatgtctaatgattatttcatttcattccttaatttgtg 27483148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 252 - 479
Target Start/End: Complemental strand, 37225791 - 37225553
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||| ||||||||||||  |||||||        ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  37225791 ctccctccgttttaaaatgagtgtcgttttagctaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaattcttttcttcca 37225692  T
Q  352 actttaccctcc---------ccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaag 440  Q
    |||||||||||          | | ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  37225691 actttaccctcaataaatacgctaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaggacagtttagtaaaag 37225592  T
Q  441 tgttatatccaataattattttattcaatttcttaatct 479  Q
    | ||||||||||| ||||||| |||  ||||||||||||    
T  37225591 tattatatccaatgattatttcattgtatttcttaatct 37225553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 294 - 479
Target Start/End: Complemental strand, 2568157 - 2567970
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcccca--tcttttctcacacaattttcaatgc 391  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||  | |  | || ||||||||||||||||||||    
T  2568157 ttgttttaaaatgaatgttactttacattttcaatacaactttaatttttttcttccaactttaccctttctaatttttctctcacacaattttcaatgc 2568058  T
Q  392 aactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||| ||||||||||||||||||||||| | || ||| |||||||||||||||| ||| ||||||| |||||||| ||||||||    
T  2568057 aactttaagtttgtctttttcttataaagtaaggacatttttgtaaaagtgttatatctaatgattatttcattcaattccttaatct 2567970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 252 - 482
Target Start/End: Original strand, 34059832 - 34060063
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttag-ctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcc 350  Q
    |||||| ||||| ||||||||||||||||||| |        ||||||| ||||||||||||| ||||||||| |||||||||||||||||||| ||| |    
T  34059832 ctccctacgttttaaaatgagtgtcactttagtcaaaaaaaatttgttttaaaatgaatgtcattttacattttcaatacaactttaatttttttctttc 34059931  T
Q  351 aactttaccctccccatcttt--tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatat 448  Q
    |||||||||||| ||| ||||  |||| |||||||||||||||||||||||  |||||||||||||||||||||| || ||||| ||||||   ||||||    
T  34059932 aactttaccctctccaacttttctctcgcacaattttcaatgcaactttaa--ttgtctttttcttataaagtaagggtagtttagtaaaaactttatat 34060029  T
Q  449 ccaataattattttattcaatttcttaatctgtg 482  Q
    ||||| ||||||| |||| |||||||||||||||    
T  34060030 ccaattattatttcattccatttcttaatctgtg 34060063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 301 - 479
Target Start/End: Complemental strand, 1341067 - 1340887
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgcaacttta 398  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||| ||||||||  |||||||||||||||||||||||    
T  1341067 aaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaacgttaccctctccaacttttctctcacacaattttcaatgcaacttta 1340968  T
Q  399 attttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    | ||||||||||||||||||||||||| || ||| | ||||||||||| || ||| ||||||| |||| |||  |||||||    
T  1340967 agtttgtctttttcttataaagtaaagacactttagaaaaagtgttatgtctaattattatttcattccattctttaatct 1340887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 44648597 - 44648365
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||||||||||||||||  ||||||         |||||| |||||||||||||||||||||||||||||||||||| |||||||  |||||    
T  44648597 ctccctccgtttcaaaatgagtgtcgttttagcaaaaaaaaattgttttaaaatgaatgtcactttacatttccaatacaacttt-attttttttttcca 44648499  T
Q  352 actttaccctcccca--tcttttctcacacaattttcaatgcaactttaattttgtc-tttttcttataaagtaaaggcagtttggtaaaagtgttatat 448  Q
    ||||||| ||| |||  | ||||||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||||||||| ||||||||||||| |    
T  44648498 actttactctctccaacttttttctcacacaattttcaattcaactttaagtttgtcttttttctcataaagtaaaggcagtttagtaaaagtgttatgt 44648399  T
Q  449 ccaataattattttattcaatttcttaatctgtg 482  Q
    | ||| ||||||| |||  ||| |||||||||||    
T  44648398 ctaatgattatttcatttcattccttaatctgtg 44648365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 293 - 482
Target Start/End: Complemental strand, 36771722 - 36771531
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatg 390  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||| |||| ||| ||||||||  |||||||||||||||    
T  36771722 tttgttttaaaatgaatgtcactttacatttacaatacaactttaattttttactttcaactttatcctctccaacttttctctcacacaattttcaatg 36771623  T
Q  391 caactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||| ||||||||||||||||||| |||  ||||||| |||||| | |||| || ||||||||||| |||  |||||||||| ||||    
T  36771622 caactttaagtttgtctttttcttataaaataagagcagtttagtaaaaatattatgtctaataattatttcattatatttcttaatatgtg 36771531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 293 - 482
Target Start/End: Original strand, 19552538 - 19552730
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacacaattttcaatg 390  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| | | ||||  ||||||| |||||||||||    
T  19552538 tttgttttaaaatgaatgtcactttacattttcaatacaactttaaattttttcttccaactttaccctctctaacttttctctcacagaattttcaatg 19552637  T
Q  391 caactttaattttgtctttttcttataaagtaaaggcagtttggt-aaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||||||||| ||||||||||||||||| | |||||| || ||||  |||||||||||| ||||||| |||  |||||||||| ||||    
T  19552638 caactttaattttgtatttttcttataaagtaaggacagtttagtaaaaaacgttatatccaatgattatttcatttcatttcttaatttgtg 19552730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 252 - 482
Target Start/End: Original strand, 25061662 - 25061891
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||| ||||||||||||||||||||||||||||        || |||| |||||||||| ||||||||||||||||||||||||||||||||| || |||    
T  25061662 ctccttccgtttcaaaatgagtgtcactttagccaaaaaaatt-gttttaaaatgaatgccactttacatttccaatacaactttaatttttttctccca 25061760  T
Q  352 actttaccctccccatcttt--tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatc 449  Q
    ||||||| ||| ||| ||||  ||||| |||||||||||||||||||||| ||||  ||||||||||||||||| || ||||| ||||||||||||| ||    
T  25061761 actttactctctccaacttttctctcatacaattttcaatgcaactttaagtttg--tttttcttataaagtaagggtagtttagtaaaagtgttatgtc 25061858  T
Q  450 caataattattttattcaatttcttaatctgtg 482  Q
     ||| ||||||| |||  ||| |||||| ||||    
T  25061859 taatgattatttcatttcattccttaatatgtg 25061891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 647787 - 647547
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    ||||||||||||||||||||||||||||||| |        ||||||| ||||||| | ||| ||||||||| |||||||||||||||||||| ||||||    
T  647787 ctccctccgtttcaaaatgagtgtcactttaaccaaaaaaatttgtttaaaaatga-tatcattttacattttcaatacaactttaatttttttcttcca 647689  T
Q  352 actttaccctcc---------ccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaag 440  Q
    |||||||||||          | | ||||||||  ||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||     
T  647688 actttaccctcaataaatactctaacttttctcttacagaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcagtttagtaaaac 647589  T
Q  441 tgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||| ||| ||||||| |||  |||||||||||||||    
T  647588 tgttatatctaatgattatttcatttcatttcttaatctgtg 647547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 252 - 482
Target Start/End: Original strand, 790053 - 790270
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||| |||||||||||||||||||| ||||| |        ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |    
T  790053 ctccgtccgtttcaaaatgagtgtccctttaaccaaaaaaatttgtttcaaaattaatgtcactttacatttccaatacaactttaatttttttcttcaa 790152  T
Q  352 actttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatcca 451  Q
    ||||| |             ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| ||||||| ||    
T  790153 acttttc-------------tctcacacaatttccaatgcaactttaattttgactttttcttataaagtaagggcagtttagtaaaagcgttatattca 790239  T
Q  452 ataattattttattcaatttcttaatctgtg 482  Q
    || ||||||| |||  |||||||||| ||||    
T  790240 atgattatttcattacatttcttaatatgtg 790270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 301 - 482
Target Start/End: Complemental strand, 31291111 - 31290929
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgcaacttta 398  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| ||| ||||||||  |||  || ||||||||  |||||||||||| ||||||||||    
T  31291111 aaaatgaatatcactttacatttctaatacaactttaatttttttctttcaactttatgctcttcaacttttctctcacacaattttcattgcaacttta 31291012  T
Q  399 attttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    | ||| ||||||||| ||||| |||||||||||| ||||||||||||| || ||||||||||| |||  ||| |||||||||||    
T  31291011 agttt-tctttttctaataaaataaaggcagtttagtaaaagtgttatgtctaataattatttcatttcattccttaatctgtg 31290929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 302 - 477
Target Start/End: Original strand, 40048900 - 40049067
Alignment:
Q  302 aaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaactttaatt 401  Q
    |||||||||||||||||||||||||        |||||||||| |||||| |||||||||| ||| |||||||| || |||||||||||||||||||| |    
T  40048900 aaatgaatgtcactttacatttcca--------ttaatttttttcttccagctttaccctctccaacttttctctcataattttcaatgcaactttaaat 40048991  T
Q  402 ttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaat 477  Q
    ||||||||||||||||||||||||||| |||  |||||||||||| || ||| ||||||| |||| ||| ||||||    
T  40048992 ttgtctttttcttataaagtaaaggcaatttaataaaagtgttatgtctaatgattatttcattccattccttaat 40049067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 295 - 482
Target Start/End: Original strand, 38457460 - 38457658
Alignment:
Q  295 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaatt 383  Q
    ||||||||||||||| ||| ||||||||| |||||||||||||||||||| | |||||||||||||||          ||| ||||||||  ||||||||    
T  38457460 tgtttcaaaatgaatatcattttacattttcaatacaactttaatttttttcatccaactttaccctcaataaatactccaacttttctctcacacaatt 38457559  T
Q  384 ttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||||||||| ||||| ||| ||||||||| ||||||||| |||||||| ||||||||||||| |  ||| ||||||| ||||||||||||||| ||||    
T  38457560 ttcaatgcaattttaagtttatctttttctaataaagtaatggcagtttagtaaaagtgttatgtgtaatgattatttcattcaatttcttaatttgtg 38457658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 294 - 482
Target Start/End: Complemental strand, 46363165 - 46362965
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaactttaccctcc---------ccatcttttctc--acacaa 381  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||          ||| ||||||||  ||||||    
T  46363165 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcacacaa 46363066  T
Q  382 ttttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgt 481  Q
    ||| |||||||||||||| ||||| ||||||||||||||||| | |||||| |||||| |||||  || ||| ||||||| |||||||| |||||| |||    
T  46363065 tttacaatgcaactttaaatttgtatttttcttataaagtaaggacagtttagtaaaaatgttaggtctaatgattatttcattcaattccttaatatgt 46362966  T
Q  482 g 482  Q
    |    
T  46362965 g 46362965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 299 - 479
Target Start/End: Original strand, 35239390 - 35239556
Alignment:
Q  299 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaacttta 398  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |             |||||||||||||||| ||||||||||    
T  35239390 tcaaaatgaatgtcactttacatttctaatacaactttaattttttc-ttccaacttttc-------------tctcacacaattttcactgcaacttta 35239475  T
Q  399 attttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    | ||||||||||||||||||||||| | |||||| |||||| ||||||  | ||| ||||||||||||||||| |||||||    
T  35239476 agtttgtctttttcttataaagtaaggacagtttagtaaaaatgttatgcctaatgattattttattcaattttttaatct 35239556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 295 - 477
Target Start/End: Original strand, 53716029 - 53716196
Alignment:
Q  295 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaac 394  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |             ||||||||| |||||||||||||    
T  53716029 tgttttaaaatgaatgttactttacatttccaatacaactttaatttttttcttccaacttttc-------------tctcacacagttttcaatgcaac 53716115  T
Q  395 tttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaat 477  Q
    |||||||  ||||||||||||||||||||  ||||||| ||||||| |||||||||||| ||||||| |||  ||||||||||    
T  53716116 tttaatt--gtctttttcttataaagtaagagcagtttagtaaaagcgttatatccaatgattatttcatttcatttcttaat 53716196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 255 - 482
Target Start/End: Original strand, 43580435 - 43580677
Alignment:
Q  255 cctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaac 353  Q
    |||||||||||||||||| ||| |||||||        ||||||||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  43580435 cctccgtttcaaaatgagcgtcgctttagccaaaaaaatttgtttcaaaataaatgtcactttacattttcaatacaactttaattttttttcttccaac 43580534  T
Q  354 tttaccct---------ccccatctttt---ctcacacaattttcaatgcaactttaattttgtctttttc--ttataaagtaaaggcagtttggtaaaa 439  Q
    ||||||||         | ||| |||||   ||||||||||||||||||||||||||| ||||||||||||   ||||||  || |||||||| ||||||    
T  43580535 tttacccttaataaatactccaactttttttctcacacaattttcaatgcaactttaaatttgtctttttcatatataaaacaagggcagtttagtaaaa 43580634  T
Q  440 gtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
     ||||||||  ||| ||||||| |||| ||| |||||||||||    
T  43580635 atgttatatgtaatgattatttcattctattccttaatctgtg 43580677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 294 - 444
Target Start/End: Original strand, 83295 - 83455
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacacaat 382  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||         | | | ||||  |||||| ||||    
T  83295 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaatttttt-cttccaactttaccctcattaaatactctaacttttctctcacgcaat 83393  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgtt 444  Q
    ||||||||||||||||| ||||||||||||||||||||||| || ||||| |||||||||||    
T  83394 tttcaatgcaactttaagtttgtctttttcttataaagtaagggtagtttagtaaaagtgtt 83455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 54933359 - 54933217
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 380  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||         | ||| ||||    |||||||||    
T  54933359 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 54933260  T
Q  381 attttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  54933259 attttcaatgcaactttaagtttgtcattttcttataaagtaa 54933217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 252 - 423
Target Start/End: Complemental strand, 25722657 - 25722473
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    ||||||||||||||||||||||||| |||||||         || ||||||||||||||||||||||||||| |||||||||||||||||||| ||||      
T  25722657 ctccctccgtttcaaaatgagtgtcgctttagccaaaaaaaattatttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttcat 25722558  T
Q  352 actttaccct---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||         | ||| ||||    |||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  25722557 actttaccctaaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcttattcttgtaaagtaa 25722473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 293 - 412
Target Start/End: Complemental strand, 43599976 - 43599855
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacacaattttcaatg 390  Q
    ||||||||||||||||||||  |||||||||   |||||||||||||||||| |||  |||||||||||| ||| ||||  |||||||||||||| ||||    
T  43599976 tttgtttcaaaatgaatgtcgttttacatttttcatacaactttaatttttttcttttaactttaccctctccaacttttctctcacacaatttttaatg 43599877  T
Q  391 caactttaattttgtctttttc 412  Q
    ||||||||| ||||||||||||    
T  43599876 caactttaagtttgtctttttc 43599855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 256 - 462
Target Start/End: Original strand, 41287037 - 41287256
Alignment:
Q  256 ctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc--cttccaac 353  Q
    ||||||||||||||||||||| ||||||||        || ||| |||||| |||||||||||||||||||||||||||||||||||||   ||||||||    
T  41287037 ctccgtttcaaaatgagtgtcgctttagctaaaaaaaattattttaaaatggatgtcactttacatttccaatacaactttaatttttttttcttccaac 41287136  T
Q  354 tttaccctcccca-----tc------ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtg 442  Q
    ||| |||||   |     ||      ||||||||||||||||||||||||||||||| ||||  |||||| |||||| |||  ||||||| |||||||||    
T  41287137 ttttccctcaataaatactcaaaccattttctcacacaattttcaatgcaactttaagtttgagtttttcatataaaataagtgcagtttagtaaaagtg 41287236  T
Q  443 ttatatccaataattatttt 462  Q
    |||| || ||| ||||||||    
T  41287237 ttatgtctaatgattatttt 41287256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 294 - 444
Target Start/End: Original strand, 44854314 - 44854475
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctcaca---caa 381  Q
    ||||||||||||||| |||||||||||||| |||||||| ||||| |||||| |||||| |||||||||          ||| |||||||| ||   |||    
T  44854314 ttgtttcaaaatgaacgtcactttacattttcaatacaattttaactttttc-ttccaattttaccctcaataaatactccaacttttctctcagtacaa 44854412  T
Q  382 ttttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgtt 444  Q
    |||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||    
T  44854413 ttttcaatgcaactttaagtttgtatttttcttataaagtaagggcagtttagtaaaagtgtt 44854475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 372 - 483
Target Start/End: Complemental strand, 2662557 - 2662446
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaattt 471  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||| ||| ||||||||||||| || ||| ||||||| |||  |||     
T  2662557 tctcacacaattttcaatgcaactttaaatttgtctttttcttataaaataagggcaatttagtaaaagtgttatgtctaatgattatttcatttgattc 2662458  T
Q  472 cttaatctgtgc 483  Q
     |||||||||||    
T  2662457 tttaatctgtgc 2662446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 344
Target Start/End: Complemental strand, 13486001 - 13485909
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    ||||||| |||||||||||||||||||||||||        ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13486001 ctccctcagtttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcaatttacatttccaatacaactttaatttttt 13485909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 2988763 - 2988622
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 380  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||         | | | ||||    |||| ||||    
T  2988763 ttgtttcaaaatgaatgtcactttacatttccaatacaa-tttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcgcaca 2988665  T
Q  381 attttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||||| |||||||| ||||||||||||||    
T  2988664 attttcaatgcaactttaagtttgtcttgttcttataaagtaa 2988622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 252 - 482
Target Start/End: Original strand, 54261372 - 54261615
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||||||||||||||||  ||||||         ||||||||||||||| ||| |||||||||| |||| ||||||||||||||| ||||||    
T  54261372 ctccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaacgtcgctttacattttcaatgcaactttaatttttttcttcca 54261471  T
Q  352 actttaccct---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaa 438  Q
    ||||||||||         | | | ||||    |||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |  | ||| |||||    
T  54261472 actttaccctcaataaatactctaacttttctctctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaa 54261571  T
Q  439 agtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    | ||||||  |   | | || |||||||||||||||||||||||    
T  54261572 attgttatgacatttgactactttattcaatttcttaatctgtg 54261615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 423
Target Start/End: Original strand, 43169291 - 43169475
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||| |||||||||||| ||||||          |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |    
T  43169291 ctccctccgttttaaaatgagtgtcgctttagtcaaaaaaaattgtttcaaaatgaatgtcattttacatttccaatacaactttaatttttttcttcta 43169390  T
Q  352 actttaccctcc---------ccatctttt----ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||| ||          | | |||||    ||||||||||||||||| ||||||||| |||||||| ||||||||||||||    
T  43169391 actttaccttcaataaatactcaaacttttatctctcacacaattttcaatacaactttaagtttgtcttattcttataaagtaa 43169475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 297 - 475
Target Start/End: Complemental strand, 43600341 - 43600152
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc--------cccatcttttctc--acacaattttc 386  Q
    ||||||||| ||||| ||||||||||| |||||||| |||||||||||| ||||||||||||||||        | |  ||||||||  ||||||||| |    
T  43600341 tttcaaaataaatgttactttacattttcaatacaattttaattttttc-ttccaactttaccctcaataaatactctacttttctctcacacaatttcc 43600243  T
Q  387 aatgcaactttaattttgtc-tttttcttataaagtaaaggca-gtttggtaaaagtgttatatccaataattattttattcaatttctta 475  Q
    |||  |||||||| |||||| ||||| |||||||||||||| | |||| |||||| ||||||||| |||||||||||||||  ||||||||    
T  43600242 aatataactttaaatttgtcattttttttataaagtaaagggaagtttagtaaaaatgttatatctaataattattttatttcatttctta 43600152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 253 - 423
Target Start/End: Complemental strand, 43688081 - 43687895
Alignment:
Q  253 tccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt---ttttccttc 349  Q
    ||||||||||||||||||||||||  ||||||         ||||| |||||| ||||||||||||||||||||||||||||||||||   |||| ||||    
T  43688081 tccctccgtttcaaaatgagtgtcgttttagcaaaaaaaaattgttccaaaataaatgtcactttacatttccaatacaactttaattttttttttcttc 43687982  T
Q  350 caactttaccct---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||         | ||| ||||    ||||||||||||||||||| |||||||| |||||||| ||||||||||||||    
T  43687981 caactttaccctcaataaatactccaacttttctctctcacacaattttcaatgaaactttaaatttgtcttgttcttataaagtaa 43687895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 293 - 362
Target Start/End: Complemental strand, 32304060 - 32303991
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||||  |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  32304060 tttgttttgaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctc 32303991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 297 - 479
Target Start/End: Original strand, 22414757 - 22414948
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaactttaccctcc---------ccatcttttctcacacaattttc 386  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||  |||||||||||||| ||          | | ||| ||| |||||||||||    
T  22414757 tttcaaaatgaatgtcactttacatttttaatataactttaattttttttcttccaactttaccttcaataaatactcaaccttctcttacacaattttc 22414856  T
Q  387 aatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    ||||||||||||| ||| |||||| |||||||| || ||| |||||  ||||||| |||| || ||||||||||| |||  ||||||||||||    
T  22414857 aatgcaactttaagtttctctttt-cttataaactataggtagtttaataaaagtattatgtctaataattatttcatttcatttcttaatct 22414948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 301 - 380
Target Start/End: Original strand, 45095559 - 45095636
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacaca 380  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||| ||| |||||||| ||||    
T  45095559 aaaatgaatgtcactttacattttcaatacaactttaatttttt--ttccaactttaccctctccaacttttctctcaca 45095636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 20512692 - 20512449
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaacttt-aattttttccttcc 350  Q
    |||||||||||||||||||||||||  ||||||        || ||||||||||||||||| |||||||||| |||| ||||||| |||||||| |||||    
T  20512692 ctccctccgtttcaaaatgagtgtcgttttagccaaaaaaatt-gtttcaaaatgaatgtcgctttacattttcaatgcaactttaaatttttttcttcc 20512594  T
Q  351 aactttaccct---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaa 437  Q
    ||||||||| |         | ||| ||||    |||||||||||||||||| ||||||||| ||||| ||||||||||||||||| |  | ||| ||||    
T  20512593 aactttaccttcaataaatactccaacttttctctctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaa 20512494  T
Q  438 aagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    || || |||  |   | | ||||||||||||||||||||||||||    
T  20512493 aattgctatgacatttgactattttattcaatttcttaatctgtg 20512449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 252 - 362
Target Start/End: Original strand, 36541447 - 36541558
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgttt-caaaatgaatgtcactttacatttccaatacaactttaattttttccttcc 350  Q
    ||||||||||||||||||||||||| |||||| |       ||||||| |||||||||||||  ||||||||| ||||||||||||| ||| || |||||    
T  36541447 ctccctccgtttcaaaatgagtgtcgctttagttaaagaaatttgttttcaaaatgaatgtcgttttacattttcaatacaactttactttatttcttcc 36541546  T
Q  351 aactttaccctc 362  Q
    ||||||||||||    
T  36541547 aactttaccctc 36541558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 307 - 481
Target Start/End: Complemental strand, 38165783 - 38165617
Alignment:
Q  307 aatgtcactttacatttccaatacaactttaattttttc-cttccaactttaccctccccatcttttctcacacaattttca----atgcaactttaatt 401  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||| |             ||||||||||||| ||    |||||||||||| |    
T  38165783 aatgtcactttacatttccaatacaactttaattttttttcttccaacttttc-------------tctcacacaatttccatccaatgcaactttaagt 38165697  T
Q  402 ttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgt 481  Q
    |||||||||||||||||||||| | |||||| ||||||||||||| |  ||| ||||||| |||  ||| ||||||||||    
T  38165696 ttgtctttttcttataaagtaaggacagtttagtaaaagtgttatgtttaatgattatttcattacattccttaatctgt 38165617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 44645340 - 44645479
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctc----acacaatt 383  Q
    |||||||||||||||| |||||||||||| || ||||||||||||||| ||||||||||||||||         | ||| ||||||||    ||| ||||    
T  44645340 tttcaaaatgaatgtcgctttacatttcccatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcttacataatt 44645439  T
Q  384 ttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||| ||| |||||||| ||||||||||    
T  44645440 ttcaatgcaactttaagtttatctttttcatataaagtaa 44645479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 51381720 - 51381865
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaactttaccctc----------cccatcttt-----tctcac 377  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| |||||| |||| ||||||||||||          || || |||     ||||||    
T  51381720 ttgtttcaaaataaatgtcactttacatttacaatacaactttaattttttttcttctaactttaccctcgataaatactccaatttttctctctctcac 51381819  T
Q  378 acaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||    
T  51381820 acaattttcaatgcaactttaagtttgtctttttattataaagtaa 51381865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 359
Target Start/End: Original strand, 22730924 - 22730989
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  22730924 ttgttttaaactgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttacc 22730989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 411
Target Start/End: Original strand, 27027732 - 27027860
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacacaat 382  Q
    |||||||||||| ||||||| |||||||||||||||||| ||||||||||| |||| ||||||| |||         | ||| ||||  |||||||||||    
T  27027732 ttgtttcaaaattaatgtcaatttacatttccaatacaaatttaatttttttcttcaaactttatccttaataaatactccaacttttctctcacacaat 27027831  T
Q  383 tttcaatgcaactttaattttgtcttttt 411  Q
    ||||||||||||||||| |||||||||||    
T  27027832 tttcaatgcaactttaaatttgtcttttt 27027860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 253 - 477
Target Start/End: Original strand, 4391862 - 4392088
Alignment:
Q  253 tccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaa 352  Q
    ||||||||||||| | ||| ||||||||||||        ||||||| ||||||||| |||||||||||||  | ||||| ||||||||||| || ||||    
T  4391862 tccctccgtttcatactgaatgtcactttagccaaaaaaatttgttttaaaatgaatatcactttacatttttagtacaattttaatttttttctcccaa 4391961  T
Q  353 ctttaccct---------ccccatcttt--tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagt 441  Q
    |||||||||         | ||| ||||  |||| ||||||||||||||||||||||| ||||||||||||||          |||||||| ||||||||    
T  4391962 ctttaccctcaataaatactccaacttttctctcgcacaattttcaatgcaactttaagtttgtctttttctt---------gggcagtttagtaaaagt 4392052  T
Q  442 gttatatccaataattattttattcaatttcttaat 477  Q
    ||||| || ||||||||||| |||  ||||||||||    
T  4392053 gttatgtctaataattatttcatttcatttcttaat 4392088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 446
Target Start/End: Complemental strand, 9167810 - 9167680
Alignment:
Q  315 tttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttctt 414  Q
    |||| |||| |||||||||||||||||||| ||||| |||||||| ||  || |||||||  ||| ||||||||||||| ||||| ||| | ||||| |     
T  9167810 tttatattttcaatacaactttaatttttttcttcctactttaccatcttcaacttttctttcacgattttcaatgcaattttaagttt-ttttttttta 9167712  T
Q  415 ataaagtaaaggcagtttggtaaaagtgttat 446  Q
    ||||||||| |||||||| |||||| ||||||    
T  9167711 ataaagtaagggcagtttagtaaaaatgttat 9167680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 445
Target Start/End: Original strand, 42740238 - 42740383
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatctttt--ctcacacaattttcaatgcaacttta 398  Q
    ||||| |||||||||||| ||||  ||||  ||||||||||||| ||||||| |||||| ||| || |||||  ||||||||||||||||||||||||||    
T  42740238 aaaataaatgtcactttatatttttaatatcactttaatttttttcttccaattttaccttcctcaacttttttctcacacaattttcaatgcaacttta 42740337  T
Q  399 attttgtctttttcttataaagtaaaggcagtttggtaaaagtgtta 445  Q
    |  || |  |||| ||||||| ||| ||||| || ||||||||||||    
T  42740338 agcttattatttttttataaaataagggcag-ttagtaaaagtgtta 42740383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 372 - 482
Target Start/End: Original strand, 5244673 - 5244782
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaattt 471  Q
    |||||||  ||||||||||||||||||| ||||| |||||||||| ||||||||  | |||  |||||||||||| || ||| ||||||| |||||||||    
T  5244673 tctcacattattttcaatgcaactttaagtttgtttttttcttat-aagtaaagagactttaataaaagtgttatgtctaatgattatttcattcaattt 5244771  T
Q  472 cttaatctgtg 482  Q
    |||||| ||||    
T  5244772 cttaatatgtg 5244782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 414
Target Start/End: Original strand, 3000751 - 3000883
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaactttaccct---------ccccatcttt--tctcacacaa 381  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||| |||||| || |||||| ||||||         | ||| ||||  ||||||||||    
T  3000751 ttgttttaaaatgaatgttactttacattttcaatacaactttaattttttttctcccaactctaccctcaataaatactccaacttttctctcacacaa 3000850  T
Q  382 ttttcaatgcaactttaattttgtctttttctt 414  Q
    |||||||||||||||||| ||||||||||||||    
T  3000851 ttttcaatgcaactttaaatttgtctttttctt 3000883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 372 - 448
Target Start/End: Original strand, 27039415 - 27039492
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtc-tttttcttataaagtaaaggcagtttggtaaaagtgttatat 448  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||||||||| | || ||| |||||||||||||||    
T  27039415 tctcacacaattttcaatgcaactttaaatttgtctttttttttataaagtaaggacactttagtaaaagtgttatat 27039492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 296 - 361
Target Start/End: Complemental strand, 35099518 - 35099453
Alignment:
Q  296 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct 361  Q
    |||||| ||| ||||||| |||||||||||||||||||||||||||||| || |||||||||||||    
T  35099518 gtttcataataaatgtcattttacatttccaatacaactttaatttttttctcccaactttaccct 35099453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 359
Target Start/End: Complemental strand, 36310404 - 36310339
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| |||||| || |||||||||||    
T  36310404 ttgtttcaaaataaatgtcattttacatttccaatacaactttattttttttctcccaactttacc 36310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 399
Target Start/End: Complemental strand, 4476498 - 4476398
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatctttt--ctcacacaattttcaatgcaacttta 398  Q
    ||||| |||||||||||||||||  ||||  | ||||||||||| ||| ||| |||||| ||| || |||||  ||||||||||||||||||||||||||    
T  4476498 aaaataaatgtcactttacatttttaatatcattttaatttttttctttcaattttaccttcctcaacttttttctcacacaattttcaatgcaacttta 4476399  T
Q  399 a 399  Q
    |    
T  4476398 a 4476398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 295 - 359
Target Start/End: Complemental strand, 42857212 - 42857148
Alignment:
Q  295 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    ||||| |||| |||||||||||||||||||| ||||||| |||||||||| |||| |||||||||    
T  42857212 tgttttaaaaggaatgtcactttacatttcccatacaacattaatttttttcttctaactttacc 42857148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 299 - 362
Target Start/End: Complemental strand, 52222892 - 52222831
Alignment:
Q  299 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||||||||||||  ||  |||||||||||||||||||||||||| |||||||||||||||||    
T  52222892 tcaaaatgaatgtcgttt--catttccaatacaactttaatttttttcttccaactttaccctc 52222831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 357
Target Start/End: Original strand, 49470788 - 49470851
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttta 357  Q
    |||||||||||||||||||  ||||||||| |||||||||||||||||||| | ||||| ||||    
T  49470788 ttgtttcaaaatgaatgtcgttttacattttcaatacaactttaatttttttcatccaaattta 49470851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 423
Target Start/End: Original strand, 53560754 - 53560805
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||| ||||||||||||||||||||  ||||||||||||||||||||||    
T  53560754 tctcacataattttcaatgcaactttaagattgtctttttcttataaagtaa 53560805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 302 - 344
Target Start/End: Complemental strand, 15514872 - 15514830
Alignment:
Q  302 aaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  15514872 aaataaatgtcactttacatttccaatacaactttaatttttt 15514830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 52202445 - 52202383
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 356  Q
    |||||| ||||||||||||  ||| ||||| |||||||||||||||||||| |||||||||||    
T  52202445 ttgttttaaaatgaatgtcgttttgcattttcaatacaactttaatttttttcttccaacttt 52202383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 384 - 461
Target Start/End: Complemental strand, 43736922 - 43736846
Alignment:
Q  384 ttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattt 461  Q
    |||||||||||||||| ||| ||||||||||||||| |||  | ||||| |||||||||||||||| ||| |||||||    
T  43736922 ttcaatgcaactttaagttt-tctttttcttataaaataagagtagtttagtaaaagtgttatatctaatgattattt 43736846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 356
Target Start/End: Original strand, 42791284 - 42791388
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttag-ctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcc 350  Q
    |||||||||||||||||||||||||||||||| |         || ||||||||| |||||||||||| |||  || ||||||||||||||||| |||||    
T  42791284 ctccctccgtttcaaaatgagtgtcactttagccaaaaaaaaattatttcaaaatcaatgtcacttta-attatcagtacaactttaatttttttcttcc 42791382  T
Q  351 aacttt 356  Q
    ||||||    
T  42791383 aacttt 42791388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 50420258 - 50420321
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttac 358  Q
    |||||| ||||| ||||||| |||||||||  ||||||||||||||||||| |||||||||||||    
T  50420258 ttgtttaaaaataaatgtcattttacatttttaatacaactttaatttttt-cttccaactttac 50420321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 53560663 - 53560726
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttta 357  Q
    ||||||||||||| ||||||  ||||||||| |||| ||||||||||||||| ||||||||||||    
T  53560663 tttgtttcaaaataaatgtcgttttacatttacaatgcaactttaatttttt-cttccaacttta 53560726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 16240664 - 16240706
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttctt 414  Q
    |||| ||||||||||||||||||||||| ||||||||||||||    
T  16240664 tctcgcacaattttcaatgcaactttaagtttgtctttttctt 16240706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 293 - 362
Target Start/End: Original strand, 5244584 - 5244652
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||||| |||||||||||||| ||||||||  |||| ||||||||||||||   |||||||||||||||    
T  5244584 tttgttttaaaatgaatgtcaccttacatttttaatataactttaatttttt-tatccaactttaccctc 5244652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 419
Target Start/End: Complemental strand, 42007119 - 42007078
Alignment:
Q  378 acaattttcaatgcaactttaattttgtctttttcttataaa 419  Q
    |||||||||||||||||||||| |||||||| ||||||||||    
T  42007119 acaattttcaatgcaactttaagtttgtcttgttcttataaa 42007078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 2458247 - 2458215
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    |||||||||||||||||||||||||||||||||    
T  2458247 ctccctccgtttcaaaatgagtgtcactttagc 2458215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 372 - 420
Target Start/End: Original strand, 36541581 - 36541629
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaag 420  Q
    ||||||||||||||| |||||||||||| |||||||| ||| |||||||    
T  36541581 tctcacacaattttcgatgcaactttaagtttgtcttgttcctataaag 36541629  T

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Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 215
Target Start/End: Original strand, 2586983 - 2587022
Alignment:
Q  176 ttattattaattaaagtgacattaaatgtcattttacaac 215  Q
    ||||||||||||||||||||||||| ||| ||||||||||    
T  2586983 ttattattaattaaagtgacattaattgttattttacaac 2587022  T

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Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 479
Target Start/End: Original strand, 22731040 - 22731126
Alignment:
Q  392 aactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||| ||||||||||||||||||| |  ||||||||| |||||| |||||| |  ||| ||||||| |||  ||||||||||||    
T  22731040 aactttaagtttgtctttttcttataaa-ttgaggcagtttagtaaaaatgttatgtttaatgattatttcattatatttcttaatct 22731126  T

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Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 423
Target Start/End: Complemental strand, 32303964 - 32303917
Alignment:
Q  376 acacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||| || |||||| |||| ||||||||||||||||||    
T  32303964 acacaattttcaatacagctttaagtttgcctttttcttataaagtaa 32303917  T

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Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 414
Target Start/End: Complemental strand, 35099426 - 35099389
Alignment:
Q  377 cacaattttcaatgcaactttaattttgtctttttctt 414  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  35099426 cacaattttcaatgcaattttaagtttgtctttttctt 35099389  T

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Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 2586918 - 2586954
Alignment:
Q  176 ttattattaattaaagtgacattaaatgtcattttac 212  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  2586918 ttattattaattaaagtgacattaattgttattttac 2586954  T

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Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 41287407 - 41287439
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  41287407 ctccctccgtttcaaaatgagtgtcgctttagc 41287439  T

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Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 42886706 - 42886738
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  42886706 ctccctccgtttcaaaatgagtgtcgctttagc 42886738  T

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Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 51398249 - 51398217
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  51398249 ctccctccgtttcaaaatgagtgtcgctttagc 51398217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 54261656 - 54261624
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  54261656 ctccctccgtttcaaaatgagtgtcgctttagc 54261624  T

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Target: chr2 (Bit Score: 119; Significance: 1e-60; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 252 - 480
Target Start/End: Complemental strand, 29795386 - 29795156
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||| ||||||| ||||||| ||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  29795386 ctccatccgttttaaaatgaatgtcactttagccaaaaatatttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttcca 29795287  T
Q  352 actttaccctccccatcttttc--tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatc 449  Q
    ||||||||||| ||| ||||||  ||||||||||||||||||||||||||  |||||||||||||||||| ||| |||||||| |||||||| |||| ||    
T  29795286 actttaccctctccaacttttctttcacacaattttcaatgcaactttaaagttgtctttttcttataaaataagggcagtttagtaaaagtattatgtc 29795187  T
Q  450 caataattattttattcaatttcttaatctg 480  Q
     ||| ||||||| |||| |||  ||||||||    
T  29795186 taatgattatttcattccattcattaatctg 29795156  T

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Target: chr2; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 317 - 482
Target Start/End: Original strand, 40410473 - 40410640
Alignment:
Q  317 tacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttctt 414  Q
    |||||||||||||||||||||||||||| || |||||||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||||||||||    
T  40410473 tacatttccaatacaactttaatttttttctcccaactttaccctctccaacttttctctgacacaattttcaatgcaactttaattttgtctttttctt 40410572  T
Q  415 ataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||| ||||||||  |||||| |||||||||||| ||||| | |||| |||||||||||||||    
T  40410573 ataaagtaagggcagtttaataaaagcgttatatccaatgattatgtcattccatttcttaatctgtg 40410640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 301 - 482
Target Start/End: Complemental strand, 40987418 - 40987237
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaactttaat 400  Q
    |||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||     
T  40987418 aaaatgaatgtcgctttacattttcaatacaactttaatttttttcttccaactttaccctctccaacttttctctcacaattttcaatgcaactttaaa 40987319  T
Q  401 tttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||| ||||||||||||||||||| | || ||| ||||||||||||| || ||| ||||||| |||  ||| |||||| ||||    
T  40987318 tttatctttttcttataaagtaaggacaatttagtaaaagtgttatgtctaatgattatttcatttcattccttaatatgtg 40987237  T

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Target: chr2; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 294 - 482
Target Start/End: Complemental strand, 4840881 - 4840682
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaat 382  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||          | | ||||||||  ||||| |    
T  4840881 ttgttccaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctcccacacagt 4840782  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  |||||||||||| ||||||| |||| |||||||||| ||||    
T  4840781 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaaacgttatatccaatgattatttcattccatttcttaatatgtg 4840682  T

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Target: chr2; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 294 - 461
Target Start/End: Original strand, 1381748 - 1381915
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 393  Q
    |||||| ||||||||||| ||||||||||||||||| |||||| ||||||| |||||||||||||| || ||| |||||||| |||||||||||||||||    
T  1381748 ttgttttaaaatgaatgttactttacatttccaatataactttgatttttttcttccaactttaccttctccaacttttctctcacaattttcaatgcaa 1381847  T
Q  394 ctttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattt 461  Q
     ||||| ||| |||||||||||||||||||  ||||||| ||||||||||||| || ||| |||||||    
T  1381848 ttttaagtttttctttttcttataaagtaagagcagtttagtaaaagtgttatgtctaatgattattt 1381915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 252 - 461
Target Start/End: Complemental strand, 4766383 - 4766188
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||| ||||||||||||||||||||||||||||        | ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  4766383 ctccatccgtttcaaaatgagtgtcactttagc-aaaaaaatctgtttcaaaatgaatgtcaatttacattttcaatacaactttaatttttttcttcca 4766285  T
Q  352 actttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatcca 451  Q
    ||||| |             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |  ||||||||||    
T  4766284 acttttc-------------tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttagtaataacgttatatcca 4766198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 252 - 414
Target Start/End: Original strand, 4536530 - 4536700
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||    
T  4536530 ctccctccgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttctccca 4536629  T
Q  352 actttaccctcccca-----tct---tttctcacacaattttcaatgcaactttaattttgtctttttctt 414  Q
    |||||||||||  ||     |||   |||||||||||||||||||||||||||||| ||||||||||||||    
T  4536630 actttaccctcaacaaatactctaactttctcacacaattttcaatgcaactttaaatttgtctttttctt 4536700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 296 - 482
Target Start/End: Original strand, 7743401 - 7743598
Alignment:
Q  296 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaattt 384  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||          ||| ||||||||  |||||||||    
T  7743401 gttttaaaatgaatgtcactttacatttccaatacaactttaatctttttcttccaactttaccctcaataaatagtccaacttttctctcacacaattt 7743500  T
Q  385 tcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||  || ||||||||||||||||  || ||||||| ||| ||||  ||||||||||    
T  7743501 tcaatgcaactttaaatttgtctttttcttataaagtaagggcaacttagtaaaagtgttatatctgatgattatttcatttaattctttaatctgtg 7743598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 297 - 479
Target Start/End: Complemental strand, 1298931 - 1298738
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctcacaca--atttt 385  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||  | || ||||||| ||||          ||| |||||||| ||||  |||||    
T  1298931 tttcaaaatgaatgtcactttacatttctaatacaactttaatttttctcatcgaactttatcctcaataaattctccaacttttctctcacataatttt 1298832  T
Q  386 caatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||| ||||||  ||||||| |||| ||||||| |||  ||||||||||||    
T  1298831 caatgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatattcaatgattatttcattttatttcttaatct 1298738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 479
Target Start/End: Original strand, 34225730 - 34225944
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttcc 350  Q
    |||||| |||||||||||||||||| |||||||        || |||||||||||||||||||||||||||| ||||||||||||||||||||  |||||    
T  34225730 ctcccttcgtttcaaaatgagtgtcgctttagccaaaaaaatt-gtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttcc 34225828  T
Q  351 aactttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatcc 450  Q
    |||||| |             |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| |||||| | |||| ||     
T  34225829 aacttttc-------------tctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcaatttagtaaaattattatgtct 34225915  T
Q  451 aataattattttattcaatttcttaatct 479  Q
    ||| ||||||| |||  ||| ||||||||    
T  34225916 aatgattatttcatttcattccttaatct 34225944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 299 - 461
Target Start/End: Complemental strand, 36360522 - 36360351
Alignment:
Q  299 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccat---------cttttctcacacaattttcaat 389  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||| ||| |||||||||||||   ||         ||||||||||||||||||||||    
T  36360522 tcaaaatgaatatcactttgcattttcaatacaactttaatttttttctttcaactttaccctcaatatatactcaaacttttctcacacaattttcaat 36360423  T
Q  390 gcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattt 461  Q
     ||||||||| ||| ||||||||||||||| ||| |||||||| ||||||||||||| || ||| |||||||    
T  36360422 acaactttaagtttatctttttcttataaaataagggcagtttagtaaaagtgttatgtctaatgattattt 36360351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 43388853 - 43388612
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||||||||||||||||| ||||||        |||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||||    
T  43388853 ctccctccgtttcaaaatgagtgtcattttagccaaaaaaatttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttcca 43388754  T
Q  352 actttaccctc--------ccca---tcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaag 440  Q
    |||||||||||        | ||   | || ||||||| |||||||||| ||||||||| ||||| ||||||||||||||||| |  | ||| ||||||     
T  43388753 actttaccctcaataaatactcaaacttttctctcacataattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaat 43388654  T
Q  441 tgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||  |   | | || |||||||||||||||||||||||    
T  43388653 tgttatgacatttgactactttattcaatttcttaatctgtg 43388612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 301 - 466
Target Start/End: Complemental strand, 14378371 - 14378219
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaactttaat 400  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || |||||||| |             |||| || ||||||||||||||||||||     
T  14378371 aaaatgaatgtcactttacattttcaatacaactttaatttttttctcccaacttttc-------------tctcgcataattttcaatgcaactttaaa 14378285  T
Q  401 tttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattc 466  Q
    ||| ||||||||||||||||||| |||||||| |||||||||||||||  ||| ||||||| ||||    
T  14378284 tttatctttttcttataaagtaagggcagtttagtaaaagtgttatattaaatgattatttcattc 14378219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 482
Target Start/End: Original strand, 24775145 - 24775386
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||||| ||||||||||| || |||        ||||||| ||||||| ||||||||||||||| |||||||| ||||||||||| || |||    
T  24775145 ctccctccgtttcataatgagtgtcatttgagccaaaaaaatttgttttaaaatgattgtcactttacattttcaatacaattttaatttttttctccca 24775244  T
Q  352 actttaccctccc---------catcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaag 440  Q
    | |||||||||           || ||||||||  ||||||||||||||  |||||||| ||||| |||||||||||||||||  ||| ||| |||||||    
T  24775245 agtttaccctcaataaatacttcaacttttctctcacacaattttcaatataactttaagtttgtttttttcttataaagtaagagcattttagtaaaag 24775344  T
Q  441 tgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||| ||| ||||||| |||||||  |||||| ||||    
T  24775345 tgttatatctaatgattatttcattcaataccttaatttgtg 24775386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 362
Target Start/End: Original strand, 33093324 - 33093434
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||| |||||||||||| ||||  ||       ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  33093324 ctccctccgttttaaaatgagtgtctctttgactaaaaaaatttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttcca 33093423  T
Q  352 actttaccctc 362  Q
    |||||||||||    
T  33093424 actttaccctc 33093434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 297 - 439
Target Start/End: Original strand, 16316710 - 16316863
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatctttt--ctcacacaatttt 385  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||| |||||  ||          ||| |||||  |||||||||||||    
T  16316710 tttcaaattgaatgtcactttatatttccaatacaactttaatttttttcttccaaatttactttcaataaatattccaacttttatctcacacaatttt 16316809  T
Q  386 caatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaa 439  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||| ||||||    
T  16316810 caatgcaactttaattttgtctttttcttatacagtaagggcaatttagtaaaa 16316863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 482
Target Start/End: Original strand, 37106886 - 37107061
Alignment:
Q  320 atttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctc--acacaattttcaatgcaactttaattttgtctt 408  Q
    |||| |||||||||||||||||||| ||||||||||||||||         | ||| ||||||||  |||||||||||||||||||||||| ||| ||||    
T  37106886 attttcaatacaactttaatttttttcttccaactttacccttaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttttctt 37106985  T
Q  409 ttt--cttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||  |||||||||||| |||| ||| ||||||||||| | || ||||||||||| |||| |||||||||| ||||    
T  37106986 ttttgcttataaagtaagggcaatttagtaaaagtgttgtgtcaaataattatttcattccatttcttaatgtgtg 37107061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 301 - 461
Target Start/End: Original strand, 42969904 - 42970065
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcccca--tcttttctcacacaattttcaatgcaacttta 398  Q
    ||||| |||||||||||||||||  ||||| ||||||||||||| |||| || |||||| ||||||  | ||||||||||||||||||||||||||||||    
T  42969904 aaaataaatgtcactttacatttttaataccactttaatttttttcttctaattttaccttccccaacttttttctcacacaattttcaatgcaacttta 42970003  T
Q  399 attttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattt 461  Q
    |  || || |||| ||||||| |||  |||| || ||||||||||||  || |||||||||||    
T  42970004 aggttatcatttttttataaaataagagcag-ttagtaaaagtgttacgtctaataattattt 42970065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 372 - 476
Target Start/End: Original strand, 43460860 - 43460961
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaattt 471  Q
    ||||||| |||||||||| |||||||||||||||||||| |||||||||||| |||||||| |||||||||   |||||||| ||||||| |||| ||||    
T  43460860 tctcacataattttcaatacaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagtg---tatccaatgattatttcattccattt 43460956  T
Q  472 cttaa 476  Q
    |||||    
T  43460957 cttaa 43460961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 14698010 - 14698128
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 393  Q
    ||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||||||||| |           | |||||||||||||||||| |||    
T  14698010 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaacttttc-----------tctctcacacaattttcaatacaa 14698098  T
Q  394 ctttaattttgtctttttcttataaagtaa 423  Q
    |||||| ||||| |||||||||||||||||    
T  14698099 ctttaagtttgtatttttcttataaagtaa 14698128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 414
Target Start/End: Original strand, 1360132 - 1360306
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnnt-ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcc 350  Q
    |||| ||||||||||||||||||||||||||||          |||||||||||||||||||||||| |||||||||||||||||||||||||| || ||    
T  1360132 ctccatccgtttcaaaatgagtgtcactttagcaaaaaaaaaattgtttcaaaatgaatgtcactttgcatttccaatacaactttaatttttttctccc 1360231  T
Q  351 aactttaccctccc---------catcttttctc--acacaattttcaatgcaactttaattttgtctttttctt 414  Q
    || |||||||||           || ||||||||  | |||||||||||||||||||||| ||||||||||||||    
T  1360232 aattttaccctcaataaatacttcaacttttctcttaaacaattttcaatgcaactttaagtttgtctttttctt 1360306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 419
Target Start/End: Original strand, 2459729 - 2459909
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||| |||||||||||  |||||||         |||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  2459729 ctccctccgttttaaaatgagtgttgctttagcaaaaaaaaattgttttaaaatgaatgtcgctttacatttccaatgcaactttaatttttttcttcca 2459828  T
Q  352 actttaccct---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaa 419  Q
    ||||||||||         | ||| ||||    |||||||||||||||||||||||||||| |||||| | ||||||||||    
T  2459829 actttaccctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgtcctattcttataaa 2459909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 362
Target Start/End: Complemental strand, 10581012 - 10580944
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||||||||||||| |||||||| |||| |||||||||||||||||||| |||||||||||||||||    
T  10581012 ttgtttcaaaatgaatatcactttatattttcaatacaactttaatttttttcttccaactttaccctc 10580944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 362
Target Start/End: Complemental strand, 18374918 - 18374850
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||| ||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||    
T  18374918 ttgtttgaaaatgaatgtcactttacatttccaatataattttaatttttttcttccaactttaccctc 18374850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 41984416 - 41984559
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttct----cacaca 380  Q
    |||||||||||| ||| || |||||||||| |||||||||||||||||||| |||||||||||||| |         | ||| |||||||    ||||||    
T  41984416 ttgtttcaaaataaatatcgctttacattttcaatacaactttaatttttttcttccaactttacctttaataaatactccaacttttctctcacacaca 41984515  T
Q  381 attttcaatgcaactttaa-ttttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||    
T  41984516 attttcaatgcaactttaagttttgtcttattcttataaagtaa 41984559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 419
Target Start/End: Complemental strand, 776080 - 775902
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||| |||||||||||||||||||| |||||||        || ||||||||||||||||| |||||||||| |||| ||||||||||||||| |||| |    
T  776080 ctccatccgtttcaaaatgagtgtcgctttagcaaaaaaaatt-gtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttt-cttcta 775983  T
Q  352 actttaccct---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaa 419  Q
    ||||||||||         | | | ||||    || ||||||||||||||||||||||||| |||||||||||||||||||    
T  775982 actttaccctcaataaatactctaacttttccctcccacacaattttcaatgcaactttaagtttgtctttttcttataaa 775902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 39561608 - 39561652
Alignment:
Q  206 attttacaacaattttctagggatttgagtttagcctctaaagtt 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  39561608 attttacaacaattttctagggatttgagtttagcctctaaagtt 39561652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 256 - 359
Target Start/End: Complemental strand, 43344412 - 43344312
Alignment:
Q  256 ctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactt 355  Q
    |||||||||||||||||||||| ||||||        || ||||||||||||||||||| ||| |||| |||||||||||||||||||  ||||||||||    
T  43344412 ctccgtttcaaaatgagtgtcattttagcaaaaaaaatt-gtttcaaaatgaatgtcaccttatattttcaatacaactttaattttt--cttccaactt 43344316  T
Q  356 tacc 359  Q
    ||||    
T  43344315 tacc 43344312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 423
Target Start/End: Original strand, 25332568 - 25332710
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacac 379  Q
    |||||||||||||||| ||| | ||||||||||||| ||||||||||||||| |||||||||||| |||         | ||| ||||    ||||| ||    
T  25332568 tttgtttcaaaatgaacgtcgccttacatttccaatgcaactttaatttttt-cttccaactttatcctcaataaatactccaacttttctctctcatac 25332666  T
Q  380 aattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||    
T  25332667 aattttcaatacaactctaagtttgtctttttcttataaagtaa 25332710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 39866820 - 39866762
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  39866820 aaaatgaatgtcgctttacatttccaatgcaaatttaatttttttcttccaactttacc 39866762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 419
Target Start/End: Complemental strand, 4566186 - 4566139
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaa 419  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||    
T  4566186 tctcacacaattttcaatgcaactttaaatttatctttttcttataaa 4566139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 14511459 - 14511526
Alignment:
Q  295 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||||||||||||||| ||||||||||  |||||||| ||||||||||||| | ||||||| ||||    
T  14511459 tgtttcaaaatgaatgtctctttacattttgaatacaacattaattttttcctccaaactttatcctc 14511526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 345
Target Start/End: Complemental strand, 45148106 - 45148055
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc 345  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||||||||||    
T  45148106 ttgttttaaaatgaatgtcactttacattttcaataaaactttaattttttc 45148055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 6591963 - 6592013
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    |||||| ||||||||| ||| ||||||||||||||||||||||||||||||    
T  6591963 ttgttttaaaatgaatatcattttacatttccaatacaactttaatttttt 6592013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 381 - 483
Target Start/End: Original strand, 11171839 - 11171941
Alignment:
Q  381 attttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctg 480  Q
    |||| ||||| |||||||| ||||||||||||  ||||||| | |  | ||| ||||||||||||| || | | ||||||||||||||||||||||| ||    
T  11171839 atttccaatgtaactttaagtttgtctttttcgcataaagttaggataatttagtaaaagtgttatgtctattgattattttattcaatttcttaatttg 11171938  T
Q  481 tgc 483  Q
    |||    
T  11171939 tgc 11171941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 19505934 - 19506018
Alignment:
Q  253 tccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 338  Q
    ||||||| ||| |||||||||||||||||| ||       ||||||||||||| |||||||||||| ||| |||||||||||||||    
T  19505934 tccctccattttaaaatgagtgtcactttaactaaaaaaatttgtttcaaaataaatgtcacttta-attcccaatacaactttaa 19506018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 10580921 - 10580870
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||||| |||||||||  ||||||| ||||||||||||||    
T  10580921 tctcacacaattttcaatacaactttaagattgtcttgttcttataaagtaa 10580870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 39866736 - 39866685
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||||| ||||||||| |||||| ||||||| ||||||||    
T  39866736 tctcacacaattttcaatacaactttaagtttgtcattttcttgtaaagtaa 39866685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 335
Target Start/End: Complemental strand, 45372736 - 45372645
Alignment:
Q  245 aaagttgctccctccgtttcaaaatgagtgtcactttagctnnnnnnnt-ttgtttcaaaatgaatgtcactttacatttccaatacaactt 335  Q
    |||||| |||||||| ||||||||||| ||||||||||||          |||||| ||||||||||||||||||||||| |||||||||||    
T  45372736 aaagttactccctccatttcaaaatgaatgtcactttagcaaaaaaaaaattgttttaaaatgaatgtcactttacattttcaatacaactt 45372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 461
Target Start/End: Complemental strand, 43344288 - 43344199
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattt 461  Q
    ||||||| |||||||||| |||||||||  || ||||||||||||||||||| ||  ||||  ||||| |||||| || ||| |||||||    
T  43344288 tctcacataattttcaatacaactttaaacttatctttttcttataaagtaagggtggtttaataaaattgttatgtctaatgattattt 43344199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 43460792 - 43460839
Alignment:
Q  315 tttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||||||||||||||||||||| ||||  |||||||| ||||||||    
T  43460792 tttacatttccaatacaactttaagttttctcttccaacgttaccctc 43460839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 33093458 - 33093508
Alignment:
Q  373 ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||||||||||||| ||| ||||  | |||||||||||    
T  33093458 ctcacacaattttcaatgcaactttaagtttatcttgatgttataaagtaa 33093508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 282
Target Start/End: Complemental strand, 45148151 - 45148121
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcacttta 282  Q
    |||||||||||||||||||||||||||||||    
T  45148151 ctccctccgtttcaaaatgagtgtcacttta 45148121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 4566263 - 4566214
Alignment:
Q  308 atgtcactttacatttccaatacaactttaattttttccttccaacttta 357  Q
    ||||||||||||||||  |||||||||||||||||||  || ||||||||    
T  4566263 atgtcactttacatttttaatacaactttaatttttttttttcaacttta 4566214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 414
Target Start/End: Original strand, 14511552 - 14511589
Alignment:
Q  377 cacaattttcaatgcaactttaattttgtctttttctt 414  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  14511552 cacaattttcaatgtaactttaaatttgtctttttctt 14511589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 4133261 - 4133229
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  4133261 ctccctccgtttcaaaatgagtgtcgctttagc 4133229  T

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Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 43388571 - 43388603
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  43388571 ctccctccgtttcaaaatgagtgtcgctttagc 43388603  T

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Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 258 - 477
Target Start/End: Complemental strand, 28044321 - 28044101
Alignment:
Q  258 ccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttta 357  Q
    |||||||||||||||||||||||||| |        |||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  28044321 ccgtttcaaaatgagtgtcactttag-taaaaaaaattgttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaacttta 28044223  T
Q  358 ccctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataa 455  Q
     |||| |||  |||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||  |||||||||||| |    
T  28044222 tcctctccaatttttctctcacacaattttcaatacaactttaattttgtctttttcttataaagtaagggcagtttagtaaaaacgttatatccaatga 28044123  T
Q  456 ttattttattcaatttcttaat 477  Q
    |||||| |||  ||||||||||    
T  28044122 ttatttcattttatttcttaat 28044101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 293 - 481
Target Start/End: Complemental strand, 36447757 - 36447567
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacaca--attttcaatg 390  Q
    ||||||| ||||||||| |||||||| |||| |||||||||||||||||||| ||||||||||||||||  ||| |||||||| ||||  |||||||||     
T  36447757 tttgttttaaaatgaatatcactttatattttcaatacaactttaatttttttcttccaactttaccctttccaacttttctctcacataattttcaatt 36447658  T
Q  391 caactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgt 481  Q
    ||||||||||||| ||||||||||||||||||||| ||||||  |||||| |||||||||| ||||||||| |||| ||||||||||||||    
T  36447657 caactttaattttatctttttcttataaagtaaagacagtttaataaaagagttatatccagtaattatttcattccatttcttaatctgt 36447567  T

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Target: chr7; HSP #3
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 252 - 439
Target Start/End: Original strand, 32275161 - 32275350
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||| |||||||||||||| ||||||||||||||        ||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  32275161 ctccatccgtttcaaaatgtgtgtcactttagctaaaaaaaattgtttcaaaatgaatgccactttacatttctaatacaactttaatttttttcttcca 32275260  T
Q  352 actttaccctccccatcttttc--tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaa 439  Q
    ||||||||||| | | ||||||  |||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||    
T  32275261 actttaccctctcaaacttttccttcacacaattttcaatgcaactttaagtttgattttttcttataaagtaaaggcagtttagtaaaa 32275350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 252 - 482
Target Start/End: Original strand, 17869194 - 17869435
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||| ||||||||||||||||||||        ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  17869194 ctccctccgttttaaaatgagtgtcactttagcgaaaaaaatttgtttcaaaatgaatgtcattttacatttccaatgcaactttaattttttccttcca 17869293  T
Q  352 actttaccctcc---------ccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaag 440  Q
    |||||| ||||          | ||||||||||  |||||||||||||||||||||||| ||||| ||||||||||||||||||| || |||  ||||||    
T  17869294 actttatcctcaataaatactcaatcttttctctcacacaattttcaatgcaactttaagtttgtatttttcttataaagtaaagacaatttaataaaag 17869393  T
Q  441 tgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||||| || ||| ||||||| |||  ||| |||||||||||    
T  17869394 tgttatgtctaatgattatttcatttcattccttaatctgtg 17869435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 300 - 446
Target Start/End: Complemental strand, 22627495 - 22627345
Alignment:
Q  300 caaaatgaatgtcactttacatttccaatacaactttaattttttc--cttccaactttaccctccccatcttttctc--acacaattttcaatgcaact 395  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||| ||||||||  ||||||||||||||||||||    
T  22627495 caaaatgaatgtcactttacatttccaatacaactttaatttttttttcttccaactttaccctctccaacttttctctcacacaattttcaatgcaact 22627396  T
Q  396 ttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttat 446  Q
    |||| |||||||| || |||||||||||||||||||| ||||| |||||||    
T  22627395 ttaagtttgtcttatttttataaagtaaaggcagtttagtaaatgtgttat 22627345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 252 - 482
Target Start/End: Original strand, 42121507 - 42121740
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttcc 350  Q
    |||||||||||| ||||||| ||||||||||||         ||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||    
T  42121507 ctccctccgttttaaaatgaatgtcactttagcaaaaaaaaattgtttcaaaatgaatgtcactttatatttccaatacaactttaattttttttcttcc 42121606  T
Q  351 aactttaccctccccatcttt--tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatat 448  Q
    |||||||| ||| ||| ||||  ||||| |||||||||||||||||||||| | | ||||||||| ||||||||| | |||||| ||||||||| ||| |    
T  42121607 aactttactctctccaacttttctctcaaacaattttcaatgcaactttaagtgtatctttttctaataaagtaaggtcagtttagtaaaagtgatatgt 42121706  T
Q  449 ccaataattattttattcaatttcttaatctgtg 482  Q
    | ||| ||||||| |||  ||| |||||||||||    
T  42121707 ctaatgattatttgatttcattccttaatctgtg 42121740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 304 - 482
Target Start/End: Complemental strand, 34002277 - 34002087
Alignment:
Q  304 atgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaattttcaatgca 392  Q
    ||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||          ||| ||||||||  |||||||||||||||||    
T  34002277 atgaatgtcactttacatttccaatacaagtttaattttattcttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgca 34002178  T
Q  393 actttaattttgtctttttcttataaagtaaag-gcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||| |||||||||||||| ||||||| |||  |||||||||||||||    
T  34002177 actttaattttgtctttttcttataaagtaaagtgcagtttagcaaaggtgttatatccaatgattatttcatttcatttcttaatctgtg 34002087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 252 - 448
Target Start/End: Complemental strand, 40207574 - 40207379
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||||||||||||||||||||||||         ||| |||||||||||||||| |||| ||||  ||||||||||||||||||| ||| ||    
T  40207574 ctccctccgtttcaaaatgagtgtcactttagccaaaaaaaattgcttcaaaatgaatgtcattttatatttttaatacaactttaatttttttctttca 40207475  T
Q  352 actttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatat 448  Q
    |||||| ||||  || |||||| | ||||||||||||||||| ||||| |||||| |||||||||||||||| |||||||| |||||||||||||||    
T  40207474 actttatcctcttcaacttttc-ctcacaattttcaatgcaattttaagtttgtcattttcttataaagtaagggcagtttagtaaaagtgttatat 40207379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 260 - 482
Target Start/End: Complemental strand, 41906122 - 41905890
Alignment:
Q  260 gtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    |||| ||||||| |||||||||||||       ||||||| ||||| |||||||||||||||||| ||||||||||||| ||||  ||||||||||||||    
T  41906122 gttttaaaatgaatgtcactttagctaaaaaaatttgttttaaaataaatgtcactttacatttctaatacaactttaagttttctcttccaactttacc 41906023  T
Q  360 ct--------ccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatc 449  Q
              | ||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||    
T  41906022 tcaataaatactccaacttttctcttacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaagcgttatatc 41905923  T
Q  450 caataattattttattcaatttcttaatctgtg 482  Q
    |||| ||||||| | |  |||||||||||||||    
T  41905922 caatgattatttcagttcatttcttaatctgtg 41905890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 293 - 482
Target Start/End: Original strand, 18886667 - 18886843
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgca 392  Q
    ||||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||          |||||   ||||||||||||||||||    
T  18886667 tttgttttaaaatgaatctcactttacattttcaatacaactttaatttttttcttccaacttt----------tcttt---cacacaattttcaatgca 18886753  T
Q  393 actttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||||||||||||||||| |||||||||||| |||||||| ||||||| |||||||| ||| ||||||| |||| |||||||| ||||||    
T  18886754 actttaattttgtcttttccttataaagtaagggcagtttagtaaaagcgttatatctaatgattatttcattccatttcttagtctgtg 18886843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 293 - 479
Target Start/End: Complemental strand, 33056433 - 33056242
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttaca---tttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acacaattttca 387  Q
    ||||||||||||| ||||||| ||||||   ||||||||||||||||||||||||| ||| ||||||| |||| ||| ||||||||  ||||||||||||    
T  33056433 tttgtttcaaaataaatgtcattttacaacatttccaatacaactttaattttttctttc-aactttatcctctccaacttttctctcacacaattttca 33056335  T
Q  388 atgcaactttaattttgtctttttctt-ataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||  ||||| |||||||||||||| ||||||||| |||||||| ||||||||||||| |  ||| ||||||| |||  ||| ||||||||    
T  33056334 atgcagttttaaatttgtctttttcttaataaagtaagggcagtttagtaaaagtgttatgtttaatgattatttcatttcattccttaatct 33056242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 252 - 414
Target Start/End: Original strand, 40298804 - 40298977
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||    
T  40298804 ctccctccgtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctccca 40298903  T
Q  352 actttaccct---------ccccatcttt--tctcacacaattttcaatgcaactttaattttgtctttttctt 414  Q
    ||||||||||         | ||| ||||  ||||||||||||||||||| |||||||| ||||||||||||||    
T  40298904 actttaccctcaataaatactccaacttttctctcacacaattttcaatgtaactttaagtttgtctttttctt 40298977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 294 - 482
Target Start/End: Complemental strand, 3681077 - 3680878
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctcacaca--at 382  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| |         | | | |||||||| ||||  ||    
T  3681077 ttgttttaaaatgaatgtcactttacattttcaatacaactttaattttgttcttccaactttaccattaataaatacactaacttttctctcacagaat 3680978  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||| ||||||||||||| |||||||||||||||||||||||  ||||||| |||||||| |||| || ||| ||||||| |||| |||| ||||||||||    
T  3680977 tttaaatgcaactttaaatttgtctttttcttataaagtaagagcagtttagtaaaagttttatgtctaatgattatttcattccattttttaatctgtg 3680878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 459
Target Start/End: Complemental strand, 42259740 - 42259527
Alignment:
Q  256 ctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactt 355  Q
    |||||||||||||| ||||||||||||| |        |||||| ||||||||||| | ||||| ||| ||||||||||||||||||||| |||||||||    
T  42259740 ctccgtttcaaaataagtgtcactttagttaaaaaaaattgttttaaaatgaatgttattttacgttttcaatacaactttaattttttc-ttccaactt 42259642  T
Q  356 taccctcc---------ccatctttt--ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgtt 444  Q
    |||||||          | | |||||  |||||| ||||||||||||||||||||  |||||||||||||||||||||| |||| ||| |||||||||||    
T  42259641 taccctcaataaatactcaaacttttgtctcacataattttcaatgcaactttaagcttgtctttttcttataaagtaagggcattttagtaaaagtgtt 42259542  T
Q  445 atatccaataattat 459  Q
    || || |||||||||    
T  42259541 atgtctaataattat 42259527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 252 - 481
Target Start/End: Original strand, 1103440 - 1103681
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnn-tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcc 350  Q
    |||| ||||||||| ||||||||||||||||||         ||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  1103440 ctccatccgtttcataatgagtgtcactttagccagaaaaaatttgtttcaaaatgaatgtcattttacatttccaatacaactttaattgttttcttcc 1103539  T
Q  351 aactttaccct---------ccccatcttt--tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaa 439  Q
    |||||||||||         |  || ||||  ||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || ||||| ||||||    
T  1103540 aactttaccctcaataaatacttcaacttttctctcacacaattttcaatgtaactttaaatttgttttttttttataaagtaagggtagtttagtaaaa 1103639  T
Q  440 gtgttatatccaataattattttattcaatttcttaatctgt 481  Q
     |||| | ||   | ||||||| |||  ||||||||||||||    
T  1103640 atgttttgtctggtgattatttcattttatttcttaatctgt 1103681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 256 - 362
Target Start/End: Original strand, 22597191 - 22597297
Alignment:
Q  256 ctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactt 355  Q
    |||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||    
T  22597191 ctccgtttcaaaatgagtgtcactttagccaaaagaatttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttcaactt 22597290  T
Q  356 taccctc 362  Q
    || ||||    
T  22597291 taacctc 22597297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 369 - 475
Target Start/End: Original strand, 34733394 - 34733500
Alignment:
Q  369 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaa 468  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||||||| || ||| ||||||| |||  |    
T  34733394 ttttctctcacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggtagtttagtaaaagtgttatgtctaatgattatttcatttca 34733493  T
Q  469 tttctta 475  Q
    |||||||    
T  34733494 tttctta 34733500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 255 - 362
Target Start/End: Complemental strand, 43813538 - 43813431
Alignment:
Q  255 cctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaact 354  Q
    ||||||||| |||||||||||| |||||||        ||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  43813538 cctccgttttaaaatgagtgtcgctttagccaacaaaatttgttttaaaatgaatgtcactttatatttccaatacaactttaatttttttcttccaact 43813439  T
Q  355 ttaccctc 362  Q
    ||||||||    
T  43813438 ttaccctc 43813431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 362
Target Start/End: Complemental strand, 19288544 - 19288434
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    ||||||||||||||||||||||||||||||||          || |||||||||||||||||||||||||||| ||||||||||||||||||| |||| |    
T  19288544 ctccctccgtttcaaaatgagtgtcactttagtaaaaaaaaattatttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttcta 19288445  T
Q  352 actttaccctc 362  Q
    |||||||||||    
T  19288444 actttaccctc 19288434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 423
Target Start/End: Original strand, 19906413 - 19906553
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc---------cccatcttt--tctcacacaat 382  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||          ||| ||||  |||| ||||||    
T  19906413 ttgtttcaaaatgaatgtcgctttacatttccaatacaacttttatttttttcttccaactttaccctcaataaatattccaacttttctctctcacaat 19906512  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||| |||||||| ||| ||||||||||    
T  19906513 tttcaatgcaactttaagtttgtcttgttcctataaagtaa 19906553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 293 - 482
Target Start/End: Complemental strand, 32345991 - 32345789
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacac 379  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||||         | ||| ||||    ||||||||    
T  32345991 tttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacac 32345892  T
Q  380 aattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||| |  | ||| |||||| ||||||  |   | | || ||||||||||||||||||||    
T  32345891 aattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaatct 32345792  T
Q  480 gtg 482  Q
    |||    
T  32345791 gtg 32345789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 255 - 359
Target Start/End: Original strand, 36836019 - 36836123
Alignment:
Q  255 cctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaact 354  Q
    |||||||||||||||||||||| ||||||         |||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||    
T  36836019 cctccgtttcaaaatgagtgtcgctttagtcaaaataatttgtttcaaaatgaatgtcgctttacattttcaatacaactttaatttttttcttccaact 36836118  T
Q  355 ttacc 359  Q
    |||||    
T  36836119 ttacc 36836123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 252 - 423
Target Start/End: Original strand, 26963436 - 26963620
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    ||||| ||||||||||||||||||  |||||||         |||||||||||| ||||||  |||||||||||||| ||||||||||||||| ||||||    
T  26963436 ctccccccgtttcaaaatgagtgttgctttagccaaaaaaaattgtttcaaaataaatgtctatttacatttccaatgcaactttaatttttttcttcca 26963535  T
Q  352 actttaccct---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||         | ||| ||||    ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  26963536 actttaccctcaatgaatactccaacttttctctctcacataattttcaatgcaactttaagtttgtctttttcttataaagtaa 26963620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 359
Target Start/End: Original strand, 30514972 - 30515037
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  30514972 ttgtttcaaaatgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttacc 30515037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 294 - 419
Target Start/End: Complemental strand, 31416906 - 31416768
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc----------cccatcttt---tctcacaca 380  Q
    |||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||           | || |||   |||||||||    
T  31416906 ttgttttaaaatgaatatcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatacttcaatttttctctctcacaca 31416807  T
Q  381 attttcaatgcaactttaattttgtctttttcttataaa 419  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  31416806 attttcaatgcaactttaaatttgtcttgttcttataaa 31416768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 257 - 423
Target Start/End: Complemental strand, 36447261 - 36447083
Alignment:
Q  257 tccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 356  Q
    |||||||||||||||||||| ||||||||       || |||||||||||||||||| ||||||||| |||||||| ||||||||||  |||||||||||    
T  36447261 tccgtttcaaaatgagtgtcgctttagctaaaaaaatt-gtttcaaaatgaatgtcattttacattttcaatacaattttaatttttctcttccaacttt 36447163  T
Q  357 accct---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    | |||         | ||| ||||    ||||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  36447162 atcctcattaaatactccaacttttctctctcacacaattttcaatgcaactttaagcttgtcttattcttataaagtaa 36447083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 42044131 - 42044066
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  42044131 tttcaaaattaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctc 42044066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 301 - 479
Target Start/End: Complemental strand, 26527544 - 26527356
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaattttcaat 389  Q
    ||||||||||| | ||||||||| |||||||||||||||||||| |||| ||||||| ||||          ||| |||||||   | | ||||||||||    
T  26527544 aaaatgaatgttattttacattttcaatacaactttaatttttttcttctaactttaacctcaataaatactccaacttttctgttaaataattttcaat 26527445  T
Q  390 gcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||||| ||| | |||||||||||||||||| ||||||| ||||| ||||||| || ||| ||||||  |||| ||||||||||||    
T  26527444 gcaactttaaattttt-tttttcttataaagtaaaagcagtttagtaaaggtgttatgtctaatgattattgcattccatttcttaatct 26527356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 362
Target Start/End: Complemental strand, 19920419 - 19920358
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  19920419 aaaatgaatgtcactttacatttccaatacaactttaatttttttctctcaactttaccctc 19920358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 361
Target Start/End: Complemental strand, 10685018 - 10684918
Alignment:
Q  261 tttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccc 360  Q
    |||||||||||||||| |||||||        ||||||||||||||||||   |||||||||| |||| ||||||||||||||| |||||||||||||||    
T  10685018 tttcaaaatgagtgtcgctttagccaaaataatttgtttcaaaatgaatgctgctttacattttcaatgcaactttaatttttttcttccaactttaccc 10684919  T
Q  361 t 361  Q
    |    
T  10684918 t 10684918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 252 - 344
Target Start/End: Original strand, 18733410 - 18733502
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    |||| ||||||| |||||||||||| |||||||         |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18733410 ctccatccgttttaaaatgagtgtcgctttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttt 18733502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 372 - 471
Target Start/End: Complemental strand, 42010640 - 42010541
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaattt 471  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||| ||| |||||||| |||||| | |||| || ||| ||||| |||||| ||||    
T  42010640 tctcatacaattttcaatgtaactttaagtttgtctttttcttataaaataagggcagtttagtaaaaatattatgtctaatgattatcttattctattt 42010541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 299 - 423
Target Start/End: Complemental strand, 39117638 - 39117502
Alignment:
Q  299 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttt---tctcacacaattttc 386  Q
    ||||||||||||||  ||||||||| |||||||||||||||| ||| |||||||| ||||||||          |||  |||   |||||||||||||||    
T  39117638 tcaaaatgaatgtcgttttacattttcaatacaactttaattattttcttccaacattaccctcaatgaatactccaattttctctctcacacaattttc 39117539  T
Q  387 aatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  39117538 aatgcaactttaagtttgtcttattcttataaagtaa 39117502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 298 - 410
Target Start/End: Original strand, 5723006 - 5723128
Alignment:
Q  298 ttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaattttc 386  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| | | ||||||||||||          | | ||||||||  |||||||||||    
T  5723006 ttcaaaatgaatgtcactttacattttcaatacaactttaattttttc-tcctaactttaccctcaataaatactcaaacttttctctcacacaattttc 5723104  T
Q  387 aatgcaactttaattttgtctttt 410  Q
    ||||||||||||| ||||||||||    
T  5723105 aatgcaactttaagtttgtctttt 5723128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 10684894 - 10684843
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  10684894 tctcacacaattttcaattcaactttaagtttgtctttttcttataaagtaa 10684843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 466
Target Start/End: Complemental strand, 30833241 - 30833066
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc-----------ctccccatcttttctcacacaattttcaat 389  Q
    ||||||||| ||| ||||||||| |||||||||||| ||||||| ||| ||||||||||           ||||   | ||||||||||||||||||| |    
T  30833241 aaaatgaatatcattttacattttcaatacaacttttatttttttctttcaactttaccttcaataaatactccaacttttttctcacacaattttcagt 30833142  T
Q  390 gcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattc 466  Q
    | |||| ||| |||||||||||| ||||||   ||| || ||| |||||||||||||||| ||||||||||| ||||    
T  30833141 gtaactctaagtttgtctttttcatataaa-acaagacaatttagtaaaagtgttatatctaataattatttcattc 30833066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 423
Target Start/End: Original strand, 6521907 - 6521958
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||||||||    
T  6521907 tctcacacaattttcaatacaattttaagtttgtctttttcttataaagtaa 6521958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 19277110 - 19277059
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||||||||||||||| |||||||| ||| ||||||||||    
T  19277110 tctcacacaattttcaatgcaactttaagtttgtcttgttcatataaagtaa 19277059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 344
Target Start/End: Complemental strand, 32873319 - 32873268
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||||||||    
T  32873319 tttgttttaaaatgaatgtcactttatatttccaatacaattttaatttttt 32873268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 369 - 414
Target Start/End: Complemental strand, 33845478 - 33845433
Alignment:
Q  369 ttttctcacacaattttcaatgcaactttaattttgtctttttctt 414  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  33845478 ttttctcgcacaattttcaatgcaactttaagtttgtctttttctt 33845433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 446
Target Start/End: Original strand, 47272240 - 47272313
Alignment:
Q  373 ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttat 446  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||||  || |||||||| |||||| ||||||    
T  47272240 ctcacacaattttcaatgcaattttatgtttgtctttttcatataaaacaagggcagtttagtaaaattgttat 47272313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 40799947 - 40800008
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtca 313  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||    
T  40799947 ctccctccgtttcaaaatgagtgtcactttagcaaaaataatttgtttcaaaatgaatgtca 40800008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 369 - 412
Target Start/End: Original strand, 18733540 - 18733583
Alignment:
Q  369 ttttctcacacaattttcaatgcaactttaattttgtctttttc 412  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||    
T  18733540 ttttctcacacaactttcaatgcaactttaaatttgtctttttc 18733583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 419
Target Start/End: Complemental strand, 29001696 - 29001582
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 393  Q
    |||||||||||| ||||||  ||||||||||||||| ||| |||||||| | ||||||||||           |  ||||||||||||||||||||||||    
T  29001696 ttgtttcaaaattaatgtcgttttacatttccaatataaccttaattttattcttccaactt-----------ttatttctcacacaattttcaatgcaa 29001608  T
Q  394 ctttaattttgtctttttcttataaa 419  Q
    |||||| ||||| || ||| ||||||    
T  29001607 ctttaagtttgttttgttcctataaa 29001582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 301 - 344
Target Start/End: Original strand, 40805030 - 40805073
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||    
T  40805030 aaaataaatgtcactttacatttacaatacaactttaatttttt 40805073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 411
Target Start/End: Complemental strand, 48838750 - 48838711
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtcttttt 411  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  48838750 tctcacacaattttcaatgcaactttaaatttgtcttttt 48838711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 423
Target Start/End: Original strand, 36836148 - 36836199
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||| |||||||||||||||||||| |||||||| ||  ||||||||||    
T  36836148 tctcacataattttcaatgcaactttaaatttgtcttgtttctataaagtaa 36836199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 312
Target Start/End: Original strand, 36912064 - 36912124
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtc 312  Q
    ||||||||||||||||||||||||| |||||||        ||||||||||||||||||||    
T  36912064 ctccctccgtttcaaaatgagtgtcgctttagcaaaaaaaatttgtttcaaaatgaatgtc 36912124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 332
Target Start/End: Original strand, 42753705 - 42753744
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaa 332  Q
    |||||||||||||||||||||||||  |||||||||||||    
T  42753705 tttgtttcaaaatgaatgtcactttcaatttccaatacaa 42753744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 301 - 358
Target Start/End: Original strand, 47271731 - 47271789
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaacttta-attttttccttccaactttac 358  Q
    |||||||||| |||| || ||||||||||||||||||  |||||| |||||||||||||    
T  47271731 aaaatgaatgacactctagatttccaatacaactttagttttttttcttccaactttac 47271789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 1742230 - 1742198
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  1742230 ctccctccgtttcaaaatgagtgtcgctttagc 1742198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 18292290 - 18292322
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  18292290 ctccctccgtttcaaaatgagtgtcgctttagc 18292322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 19906653 - 19906621
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  19906653 ctccctccgtttcaaaatgagtgtcgctttagc 19906621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 32345748 - 32345780
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  32345748 ctccctccgtttcaaaatgagtgtcgctttagc 32345780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 33296064 - 33296028
Alignment:
Q  179 ttattaattaaagtgacattaaatgtcattttacaac 215  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  33296064 ttattaattaaagtgacaataattgtcattttacaac 33296028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 2e-56; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 294 - 482
Target Start/End: Complemental strand, 48260008 - 48259818
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttc--tcacacaattttcaatgc 391  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | ||||||  ||||||||||||||||||    
T  48260008 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctctcaaacttttctttcacacaattttcaatgc 48259909  T
Q  392 aactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||||||| ||| |||||||||||||||| || ||||||||  |||||||||||| || ||  ||||||| |||| ||| |||||||||||    
T  48259908 aactttaagtttatctttttcttataaagcaagggcagtttaataaaagtgttatgtctaacgattatttcattctattccttaatctgtg 48259818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 295 - 482
Target Start/End: Complemental strand, 1430666 - 1430491
Alignment:
Q  295 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaac 394  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |             || |||||||||| |||||||||    
T  1430666 tgtttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaacttttc-------------tcacacacaatttccaatgcaac 1430580  T
Q  395 tttaattttgtctttttcttataaagtaaag-gcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||| ||||||| ||| ||||||||||||||||    
T  1430579 tttaagtttgtctttttcttataaagtaaagtgcagtttagtaaaagtgttatatctaattattatttcattaaatttcttaatctgtg 1430491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 297 - 482
Target Start/End: Complemental strand, 40061048 - 40060861
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgcaac 394  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||  ||| |||||||||||| ||| ||||||||  ||| |||||||||||||||    
T  40061048 tttcaaaatgaatgtcactttacattttcaatacaactttaattttttttttcaaactttaccctctccaacttttctcttacaaaattttcaatgcaac 40060949  T
Q  395 tttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    | |||  || ||||||||||||||||||| |||| ||| ||||||||||||| || ||| ||||||| |||  |||||||||| ||||    
T  40060948 tataaaattatctttttcttataaagtaagggcaatttagtaaaagtgttatgtctaatcattatttcatttcatttcttaatatgtg 40060861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 294 - 481
Target Start/End: Original strand, 11650056 - 11650254
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc----------cccatcttt-tctcacacaat 382  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||          || || ||| |||||||||||    
T  11650056 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaatttttctctcacacaat 11650155  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgt 481  Q
    || |||||||||||||| |||||||||||||| |||||||| |||||||| |||||| |  |||||| |||  |||||| |||||||||||||||||||    
T  11650156 ttccaatgcaactttaagtttgtctttttcttttaaagtaagggcagtttagtaaaaatactatatctaatggttatttcattcaatttcttaatctgt 11650254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 84690 - 84473
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||| ||| ||||||||||||||||         |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  84690 ctccctccgttttaaattgagtgtcactttagcaaaaaaaaattgttttaaaatgaatgtcactttacatttccaatacaactttaatttttttcttcca 84591  T
Q  352 actttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatcca 451  Q
    | ||| |             |||| ||||||||||||||||||||||| ||||||||||||||||||||||| | || ||| ||||||||||||| || |    
T  84590 atttttc-------------tctcgcacaattttcaatgcaactttaagtttgtctttttcttataaagtaaggacattttagtaaaagtgttatgtcta 84504  T
Q  452 ataattattttattcaatttcttaatctgtg 482  Q
    || ||||||| |||||||| |||||||||||    
T  84503 atgattatttcattcaattccttaatctgtg 84473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 294 - 478
Target Start/End: Complemental strand, 24041155 - 24040983
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaactttaccctccccatcttttctcacacaattttcaatgca 392  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||| |             |||||||||||||||||||||    
T  24041155 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttttc-------------tctcacacaattttcaatgca 24041069  T
Q  393 actttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatc 478  Q
    ||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| || ||| ||||||| |||| ||| |||||||    
T  24041068 actttaagtttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcattccattccttaatc 24040983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 295 - 477
Target Start/End: Original strand, 1428865 - 1429059
Alignment:
Q  295 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaatt 383  Q
    ||||| |||||||||||||||||||||||| |||||||||| |||||||| ||| |||||||||||||          | | ||||||||  ||||||||    
T  1428865 tgttttaaaatgaatgtcactttacatttctaatacaacttaaatttttttcttgcaactttaccctcaataaatactcaaacttttctctcacacaatt 1428964  T
Q  384 ttcaatgcaactttaattttgtctttttcttataaagtaaagg-cagtttggtaaaagtgttatatccaataattattttattcaatttcttaat 477  Q
    | |||| ||||||||| |||||| ||||||||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  1428965 tccaattcaactttaagtttgtccttttcttataaagtaaagggcagtttagtaaaagtgttatatctaataattatttcattcaatttcttaat 1429059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 28751605 - 28751363
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaa-tgtcactttacatttccaatacaactttaattttttccttcc 350  Q
    |||| ||||||||||||||||||||||||||||         || |||||||||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  28751605 ctccatccgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaaatgtcactttacattttcaatacaactttaatttttttcttcc 28751506  T
Q  351 aactttaccctcc---------ccatcttttctcac--acaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaa 439  Q
    ||||||||||||          | | |||||||| |  ||||||||||||| |||||||| |||||| |||||||||||||||| |||||||| ||||||    
T  28751505 aactttaccctcaataaatactcaaacttttctctcgcacaattttcaatgtaactttaagtttgtccttttcttataaagtaagggcagtttagtaaaa 28751406  T
Q  440 gtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
     |||||| || ||| |||||||||||  ||| |||||||||||    
T  28751405 atgttatgtctaatgattattttatttcattccttaatctgtg 28751363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 256 - 479
Target Start/End: Complemental strand, 5317769 - 5317535
Alignment:
Q  256 ctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactt 355  Q
    ||||||||||||||||||||||||||| |        |||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||    
T  5317769 ctccgtttcaaaatgagtgtcactttatccaacaaaatttgtttcaaaatgaatgtcactttacaatttcaatacaactttaatttttttcttccaactt 5317670  T
Q  356 taccct---------ccccatcttttctc-acacaattttcaatgcaactttaattttgtctttttcttataaagtaa-aggcagtttggtaaaagtgtt 444  Q
    ||||||         |  || ||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||  |||| ||| |||||||||||    
T  5317669 taccctcaataaatactacaacttttctctccacaattttcaatgcaactttaagtttgtctttttcttataaaataaggggcaatttagtaaaagtgtt 5317570  T
Q  445 atatccaataattattttattcaatttcttaatct 479  Q
    || || ||| ||||||| |||  ||| ||||||||    
T  5317569 atgtctaatgattatttcatttcattccttaatct 5317535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 252 - 482
Target Start/End: Original strand, 43929640 - 43929881
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnnt-ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcc 350  Q
    |||||||||||||||||||||||||||||||||          |||||||||||||||||||| |||   ||||||||||||||||||||||||||||||    
T  43929640 ctccctccgtttcaaaatgagtgtcactttagcaaaaaaaaaattgtttcaaaatgaatgtcaatttcagtttccaatacaactttaattttttccttcc 43929739  T
Q  351 aactttaccctc----------cccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaag 440  Q
    ||||||||||||          ||  | || ||||||| ||||||| || ||||||||| || |||||||||||||||||||| || ||| | |||||||    
T  43929740 aactttaccctcaataaatactccacttttctctcacataattttcgatacaactttaagttagtctttttcttataaagtaatggaagtatagtaaaag 43929839  T
Q  441 tgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||||| || ||| ||||||| ||||||||||||||| ||||    
T  43929840 tgttatgtctaatgattatttcattcaatttcttaatttgtg 43929881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 253 - 423
Target Start/End: Complemental strand, 44582975 - 44582792
Alignment:
Q  253 tccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaa 352  Q
    |||||||||||||||||||||||||||||| ||       ||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  44582975 tccctccgtttcaaaatgagtgtcactttaactaaaacaatttatttcaaaataaatgtcactttacatttccaatacaactttaatttttttcttccaa 44582876  T
Q  353 ctttaccct---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||         | ||| ||||    ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  44582875 ctttaccctcaataaatactccaacttttctatctcacataattttcaatgcaactttaagtttgtctttttcttataaagtaa 44582792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 50350054 - 50349812
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaat--gtcactttacatttccaatacaactttaattttttccttc 349  Q
    |||||||||||||||||||||| ||||||||||         ||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||    
T  50350054 ctccctccgtttcaaaatgagtatcactttagccaaaaaaaattgtttcaaaatgaatatgtcactttacatttccaatacaactttaatttttttcttc 50349955  T
Q  350 caact--ttaccctccccatcttt--tctcacacaattttcaatgcaactttaattttgtctttttc------ttataaagtaaaggcagtttggtaaaa 439  Q
    || ||   ||    | | | ||||  |||||||||||||||||||||||||||| ||||||||||||      ||||||||||| |||||||| ||||||    
T  50349954 cacctcaataaatactcaaacttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataattataaagtaagggcagtttagtaaaa 50349855  T
Q  440 gtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||| || ||| ||||||| |||| ||| |||||| ||||    
T  50349854 gtgttatgtctaatgattatttcattccattccttaatttgtg 50349812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 252 - 423
Target Start/End: Original strand, 2458964 - 2459144
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||||||||||||||||  ||||||        |||||||||||||||||||| |||||||||| |||| ||||||||||||||| ||||||    
T  2458964 ctccctccgtttcaaaatgagtgtcgttttagccaaaaaaatttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttcca 2459063  T
Q  352 actttaccct---------ccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||         | | | |||||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  2459064 actttaccctcaacaaatactcaaacttttctctcacaattttcaatacaactttaagtttgtatttttcttataaagtaa 2459144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 252 - 446
Target Start/End: Original strand, 12002202 - 12002407
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||| ||||||||||||  |||||||        |||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  12002202 ctccctccgttttaaaatgagtgtcgttttagctaaaaaaaattgttttaaaatgaatgtcattttacatttccaatacaactttaatttttttcttcca 12002301  T
Q  352 actttacc-----------ctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaag 440  Q
     |||||||           ||||   | ||||||||||||||||||||||||||||||| |||||||||||| ||||||  || |||||||| |||||||    
T  12002302 gctttaccttcaataaatactccaacttttttctcacacaattttcaatgcaactttaagtttgtctttttcatataaaacaagggcagtttagtaaaag 12002401  T
Q  441 tgttat 446  Q
    | ||||    
T  12002402 tattat 12002407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 297 - 446
Target Start/End: Complemental strand, 17919971 - 17919811
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcccca-----------tcttttctcacacaatttt 385  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||   |           | |||||||||||||||||    
T  17919971 tttcaaaatgaatatcactttacatttccaatacaactttaatttttttcttccaactttaccctcaatatatactctaacttttttctcacacaatttt 17919872  T
Q  386 caatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttat 446  Q
    |||||||||||||| |||||||||||  ||||||  || |||||||| |||||||||||||    
T  17919871 caatgcaactttaagtttgtctttttaatataaaacaagggcagtttagtaaaagtgttat 17919811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 372 - 481
Target Start/End: Original strand, 52403563 - 52403672
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaattt 471  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||||||||| ||||||||  ||| ||||||||||||||| ||||||| |||| ||||    
T  52403563 tctcacataattttcagtgcaactttaattttgtcttttccttataaagtaagggcagtttaataacagtgttatatccaatgattatttcattccattt 52403662  T
Q  472 cttaatctgt 481  Q
    ||||||||||    
T  52403663 cttaatctgt 52403672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 38132322 - 38132204
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |           ||||||||||||||||||||||||    
T  38132322 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaacttttc-----------tttctcacacaattttcaatgcaa 38132234  T
Q  394 ctttaattttgtctttttcttataaagtaa 423  Q
    |||||| | |||||| ||| ||||||||||    
T  38132233 ctttaagtatgtcttgttcctataaagtaa 38132204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 369 - 482
Target Start/End: Original strand, 6332251 - 6332364
Alignment:
Q  369 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaa 468  Q
    |||||||||||||||||||||| |||||||  |||||||||||| ||||||  ||||||||||| ||||||||||||| || ||| ||||||| ||||||    
T  6332251 ttttctcacacaattttcaatgtaactttatgtttgtctttttcatataaaacaaaggcagtttagtaaaagtgttatgtctaatgattatttcattcaa 6332350  T
Q  469 tttcttaatctgtg 482  Q
    ||||||||| ||||    
T  6332351 tttcttaatttgtg 6332364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 295 - 439
Target Start/End: Complemental strand, 37437549 - 37437402
Alignment:
Q  295 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcccca---tcttttctcacacaattttcaatgc 391  Q
    ||||||||||||| | || |||||||||| |||||||| ||||||| ||| ||| |||||||| |||| | |   | || ||||||||||||||||||||    
T  37437549 tgtttcaaaatgagtatcgctttacattttcaatacaattttaattattttctttcaactttatcctctctaattttttctctcacacaattttcaatgc 37437450  T
Q  392 aactttaattttgtctttttcttataaagtaaaggcagtttggtaaaa 439  Q
    |||||||| ||||||||||||||||||||||| |||| ||| ||||||    
T  37437449 aactttaagtttgtctttttcttataaagtaagggcaatttagtaaaa 37437402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 339 - 482
Target Start/End: Original strand, 30006182 - 30006327
Alignment:
Q  339 ttttttccttccaactttaccctccccatcttttctcaca--caattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggta 436  Q
    |||||| ||| ||||||||||||| ||| |||||||| ||  ||||||||||||||||||||| ||| |||||||||||||||||||  ||| ||| |||    
T  30006182 tttttttctttcaactttaccctctccaacttttctctcaaacaattttcaatgcaactttaaatttatctttttcttataaagtaagagcaatttagta 30006281  T
Q  437 aaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    | |||||||| || ||| ||||||| ||||||||  ||||||||||    
T  30006282 atagtgttatgtctaatgattatttcattcaattcattaatctgtg 30006327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 422
Target Start/End: Complemental strand, 255068 - 254926
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttaccct---------ccccatctttt----ctcacac 379  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||| |||| ||||||||||||||||         | ||| |||||    |||||||    
T  255068 ttgtttcaaaatgaatgtcgctttacatttccaatgcaactttaattttttttcttccaactttaccctcaataaatactccaacttttctcactcacac 254969  T
Q  380 aattttcaatgcaactttaattttgtctttttcttataaagta 422  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  254968 aattttcaatgcaactttaagtttgtctttttcttataaagta 254926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 305 - 482
Target Start/End: Complemental strand, 10691074 - 10690910
Alignment:
Q  305 tgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaactttaattttg 404  Q
    ||||||||||||||||||| |||||||||| ||||||||| ||| |||||||             | |||||||||||||||||||||||||||| ||||    
T  10691074 tgaatgtcactttacattttcaatacaactataatttttttctttcaacttt-------------tatctcacacaattttcaatgcaactttaagtttg 10690988  T
Q  405 tctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||||||||||  ||||||  ||||||| |||||| ||||||||| ||| ||||||| |||  |||||||||| ||||    
T  10690987 tctttttcttacgaagtaagtgcagtttagtaaaaatgttatatctaatgattatttcatttcatttcttaatatgtg 10690910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 256 - 446
Target Start/End: Complemental strand, 17806567 - 17806366
Alignment:
Q  256 ctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactt 355  Q
    |||||||||||||||||||||||||||||         |||||| ||||||| |||| ||||||||||||||||||||||||||||||| ||||||| ||    
T  17806567 ctccgtttcaaaatgagtgtcactttagccaaaaaaaattgttttaaaatgagtgtcgctttacatttccaatacaactttaattttttacttccaattt 17806468  T
Q  356 taccct---------ccccatcttt--tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgtt 444  Q
    |||| |         | ||| ||||  ||||| |||||||||||||||| ||||| |||||||||||||||||||| ||||  | ||| |||||| ||||    
T  17806467 taccttcaataaatactccaacttttctctcatacaattttcaatgcaattttaagtttgtctttttcttataaaggaaagttattttagtaaaattgtt 17806368  T
Q  445 at 446  Q
    ||    
T  17806367 at 17806366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 419
Target Start/End: Original strand, 26252116 - 26252254
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 380  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||         | | | ||||    |||||||||    
T  26252116 ttgtttcaaaatgaatgtcactttacatttccaatacaacttaaatttttttcttccaactttacccttaataaatactctaacttttttctctcacaca 26252215  T
Q  381 attttcaatgcaactttaattttgtctttttcttataaa 419  Q
    ||||||||||||||||||| |||||||| ||||||||||    
T  26252216 attttcaatgcaactttaagtttgtcttgttcttataaa 26252254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 252 - 423
Target Start/End: Original strand, 22664897 - 22665075
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    ||||||| |||||||||||||  |||||||||||        |||||||||||||||||||||||||||||||||||||||| ||||||  || ||||||    
T  22664897 ctccctcagtttcaaaatgagcatcactttagctaaaaaa--ttgtttcaaaatgaatgtcactttacatttccaatacaacgttaattaatttcttcca 22664994  T
Q  352 actttaccct---------ccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||         | ||| ||| |||| ||||||||| ||| ||||||||| |||||||| ||||||||||||||    
T  22664995 actttaccctcaataaatactccaacttctctctcacaatttttaattcaactttaagtttgtcttgttcttataaagtaa 22665075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 372 - 477
Target Start/End: Complemental strand, 43105667 - 43105562
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaattt 471  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||||| ||| || | ||| ||||||||||||| || ||| ||||||| |||||||||    
T  43105667 tctcacgcaattttcaatgcaattttaagtttgtctttttcttataaaataatggtaatttagtaaaagtgttatgtctaatgattatttcattcaattt 43105568  T
Q  472 cttaat 477  Q
    ||||||    
T  43105567 cttaat 43105562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 414
Target Start/End: Original strand, 12851739 - 12851870
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccat---------cttttc--tcacacaat 382  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||   ||         ||||||  ||| |||||    
T  12851739 ttgtttcaaaatgaatgtcactttacatttccaatagaactttaatttttttctcccaactttaccctcaatatatactcaaacttttcattcatacaat 12851838  T
Q  383 tttcaatgcaactttaattttgtctttttctt 414  Q
    ||| ||||||||||||||||||||||||||||    
T  12851839 ttttaatgcaactttaattttgtctttttctt 12851870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 444
Target Start/End: Original strand, 43755016 - 43755187
Alignment:
Q  259 cgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttac 358  Q
    ||||||||||||||||||||||||||         || |||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||       
T  43755016 cgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaacgtcactttacattttcaatacaactttaatttttt-cttccaactt--- 43755111  T
Q  359 cctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgtt 444  Q
              || |||||||||||||||||  ||||||||| |||||||||||||||| |||||| |||  ||| |||||||||||    
T  43755112 ----------ttctctcacacaattttcaaaacaactttaagtttgtctttttcttattaagtaagggcgatttagtaaaagtgtt 43755187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 252 - 362
Target Start/End: Original strand, 44024501 - 44024611
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||| |||||||||||| |||||||         ||||||||||||||||| | |||||||||| |||| ||||||||||||||| ||||||    
T  44024501 ctccctccgttttaaaatgagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgccgctttacattttcaatgcaactttaatttttttcttcca 44024600  T
Q  352 actttaccctc 362  Q
    |||||||||||    
T  44024601 actttaccctc 44024611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 293 - 482
Target Start/End: Original strand, 44583769 - 44583968
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttct--cacacaa 381  Q
    ||||||| |||||||||||||| ||||||||  ||||||||||||||||||| ||||  ||||||||||         | | | |||||||  |||| |     
T  44583769 tttgttttaaaatgaatgtcaccttacatttttaatacaactttaatttttttcttctgactttacccttaataagtactctaacttttctttcacatag 44583868  T
Q  382 ttttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgt 481  Q
    ||||||||||||| |||| ||||||||||||||||||| | |||||||||| | |||| |||||| || ||| |||||||||||  |||||||||| |||    
T  44583869 ttttcaatgcaacattaagtttgtctttttcttataaaat-aaggcagtttaggaaaattgttatgtctaatgattattttatttcatttcttaatttgt 44583967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 45377301 - 45377236
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||    
T  45377301 tttcaaaatgaatgtcactttacatttccaatacaactttactttttttctcccaactttaccctc 45377236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 294 - 477
Target Start/End: Complemental strand, 43738408 - 43738214
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccc---------catcttttct--cacacaat 382  Q
    |||||| |||||||||||||||| |||||| ||||||||||| |||||||| ||| ||||||||| |||           ||  ||||||  ||| ||||    
T  43738408 ttgttttaaaatgaatgtcacttcacattttcaatacaacttaaatttttttctttcaactttactctcaataaatacttcaatttttctttcacgcaat 43738309  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaat 477  Q
    |||||| | |||||||  ||| |||||||||||||||||||||| ||||| |||||| | |||| || |||||||||||||||  ||||||||||    
T  43738308 tttcaaagtaactttatatttatctttttcttataaagtaaaggtagtttagtaaaaatattatgtctaataattattttatttcatttcttaat 43738214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 297 - 423
Target Start/End: Original strand, 49894807 - 49894920
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaactt 396  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||| |||| |||||             || ||||||||||||||||||| |||||    
T  49894807 tttcaaaatgaatgttattttacatttccaatacaactttaatttttttcttctaactt-------------ttctctcacacaattttcaatgtaactt 49894893  T
Q  397 taattttgtctttttcttataaagtaa 423  Q
    ||| |||||||| ||||||||||||||    
T  49894894 taagtttgtcttattcttataaagtaa 49894920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 293 - 446
Target Start/End: Complemental strand, 5854381 - 5854215
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttc----tcacac 379  Q
    ||||||||| ||| |||||| ||||||||||||||| |||||||||||||||  ||||||||||| ||||          ||| ||||||    ||||||    
T  5854381 tttgtttcagaataaatgtcgctttacatttccaatgcaactttaatttttttattccaactttatcctcaataaatactccaacttttcgatctcacac 5854282  T
Q  380 aattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttat 446  Q
    ||||||||||||||| ||||  ||||||||||||||||||||||||  | ||| |||||| ||||||    
T  5854281 aattttcaatgcaaccttaaggttgtctttttcttataaagtaaagttattttagtaaaattgttat 5854215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 446
Target Start/End: Complemental strand, 48320144 - 48319992
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacaca-attttcaatgca 392  Q
    |||||| ||||| ||||| |||||| |||| |||||||| |||||||||||| ||| |||||||| ||| |||  || |||| |||| | |||| |||||    
T  48320144 ttgttttaaaataaatgttactttatattttcaatacaaatttaattttttctttc-aactttactctctccaatttatctctcacacaatttcgatgca 48320046  T
Q  393 actttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttat 446  Q
    ||||||| ||||||||| | ||||||||||| |||| ||| |||||||| ||||    
T  48320045 actttaagtttgtctttcttttataaagtaagggcaatttagtaaaagtcttat 48319992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 245 - 361
Target Start/End: Complemental strand, 15647264 - 15647150
Alignment:
Q  245 aaagttgctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    |||||| |||||||| ||||| ||||||||||||||||||         |||||||||||||||||||||||||||||| |||||||| |||  ||||||    
T  15647264 aaagttactccctccatttcataatgagtgtcactttagcaaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaaattt--tttttt 15647167  T
Q  345 ccttccaactttaccct 361  Q
     || |||||||||||||    
T  15647166 tctcccaactttaccct 15647150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 252 - 358
Target Start/End: Complemental strand, 15698949 - 15698841
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc--tnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttc 349  Q
    |||| ||||||||||||||||||||||||||||           |||||| |||||||||||||||||| ||||||||||||||||||||||| | ||||    
T  15698949 ctccatccgtttcaaaatgagtgtcactttagcaaaaaaaaaaattgttttaaaatgaatgtcactttatatttccaatacaactttaattttcttcttc 15698850  T
Q  350 caactttac 358  Q
    |||||||||    
T  15698849 caactttac 15698841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 382 - 466
Target Start/End: Complemental strand, 45749554 - 45749470
Alignment:
Q  382 ttttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattc 466  Q
    ||||||||| || ||||| ||||||||||||||||||||||| ||| |||| ||||||||||||| || ||| ||||||||||||    
T  45749554 ttttcaatgtaaatttaagtttgtctttttcttataaagtaagggcggtttagtaaaagtgttatgtctaatgattattttattc 45749470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 301 - 479
Target Start/End: Original strand, 2245791 - 2245982
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctcac----acaattttca 387  Q
    |||||||||||||| |||||||| ||||||||||||||| |||| ||| |||||||||||||          | | |||||||| |    ||||||||||    
T  2245791 aaaatgaatgtcaccttacattttcaatacaactttaatctttttctttcaactttaccctcaataaatactcaaacttttctctctttcacaattttca 2245890  T
Q  388 atgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    ||||| |||||| |||||||||||||||||||| || | |||||| |||||| | |||| |  ||| |||| || |||| ||||||||||||    
T  2245891 atgcatctttaagtttgtctttttcttataaaggaatgacagtttagtaaaaatattatgtttaatgattacttcattccatttcttaatct 2245982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 50158458 - 50158392
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttaccctc 362  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||| ||||    
T  50158458 tttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaacctc 50158392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 482
Target Start/End: Complemental strand, 15698905 - 15698705
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctcacaca--at 382  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||| |||          | | |||||||| ||||  ||    
T  15698905 ttgttttaaaatgaatgtcactttatatttccaatacaactttaattttcttcttccaactttactctcaataaatactcaaacttttctctcacataat 15698806  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagta-aaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgt 481  Q
    |||||||  |||||||| ||| |||||||||||||||||| | || |||||  | |||||||||| || ||| ||||||| |||  ||| |||||| |||    
T  15698805 tttcaatagaactttaagtttatctttttcttataaagtacatggtagtttatttaaagtgttatgtctaatgattatttaattttattccttaatttgt 15698706  T
Q  482 g 482  Q
    |    
T  15698705 g 15698705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 26582923 - 26582985
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 356  Q
    |||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  26582923 ttgttttaaaataaatgttactttacatttccaatacaactttaatttttttcttcgaacttt 26582985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 28200379 - 28200236
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaa-tacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacac 379  Q
    ||||||||||||||||||| || ||||||| ||| | ||||||||||||||| ||||||||||||||||         | ||| ||||    |||| |||    
T  28200379 ttgtttcaaaatgaatgtcgctctacattttcaaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcgcac 28200280  T
Q  380 aattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||    
T  28200279 aattttcaatacaactttaagtttgtatttttcttataaagtaa 28200236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 40719020 - 40719078
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    ||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||||||    
T  40719020 aaaatgaatgtcaatttacatttttaatacaactttaatttttttcttccaactttacc 40719078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 419
Target Start/End: Complemental strand, 42650402 - 42650267
Alignment:
Q  296 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccc---------catctttt---ctcacacaatt 383  Q
    |||| ||||| |||||| ||||||||||| ||||||||||||||||||| |||||| ||||||| ||           || |||||   |||||||||||    
T  42650402 gttttaaaataaatgtcgctttacatttctaatacaactttaatttttttcttccagctttaccttcaagaaatacttcaactttttctctcacacaatt 42650303  T
Q  384 ttcaatgcaactttaattttgtctttttcttataaa 419  Q
    |||||||||| ||||| |||||||||||||||||||    
T  42650302 ttcaatgcaattttaagtttgtctttttcttataaa 42650267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 342
Target Start/End: Complemental strand, 9552484 - 9552436
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttt 342  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  9552484 ttgttttaaaatgaatgtcattttacatttccaatacaactttaatttt 9552436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 11134614 - 11134548
Alignment:
Q  295 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| ||  |||||||||| |||||    
T  11134614 tgtttcaaaatgaatgtcactttacattttcaatgcaactttaatttctt-tttccaactttgccctc 11134548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 372 - 418
Target Start/End: Complemental strand, 672346 - 672300
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataa 418  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  672346 tctcacacaattttcaatgcaaatttaagtttgtctttttcttataa 672300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 362
Target Start/End: Original strand, 52403482 - 52403542
Alignment:
Q  302 aaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||||||||||||||| |||| |||||||||||||| ||||   ||||||||||||||||    
T  52403482 aaatgaatgtcactttaaattttcaatacaactttaagttttctattccaactttaccctc 52403542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 423
Target Start/End: Complemental strand, 9552420 - 9552369
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||| ||||||||||||||||||||  ||||||| ||||||||||||||    
T  9552420 tctcacataattttcaatgcaactttaagattgtcttgttcttataaagtaa 9552369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 422
Target Start/End: Complemental strand, 35149436 - 35149394
Alignment:
Q  380 aattttcaatgcaactttaattttgtctttttcttataaagta 422  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  35149436 aattatcaatgcaactttaattttatctttttcttataaagta 35149394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 35149535 - 35149485
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    ||||||| |||| ||| |||||||| |||||||||||||||||||||||||    
T  35149535 ttgtttcgaaataaatttcactttatatttccaatacaactttaatttttt 35149485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 356
Target Start/End: Complemental strand, 50591446 - 50591388
Alignment:
Q  299 tcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaacttt 356  Q
    ||||||||||||||  |||||||| ||||||||||||||||| |||| |||||||||||    
T  50591446 tcaaaatgaatgtcgttttacattaccaatacaactttaattttttttcttccaacttt 50591388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 318
Target Start/End: Complemental strand, 672463 - 672397
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcacttta 318  Q
    |||||||||||| ||||||||||||||||||||        ||||||| ||||||||||||||||||    
T  672463 ctccctccgttttaaaatgagtgtcactttagccaaaaaaatttgttttaaaatgaatgtcacttta 672397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 294 - 358
Target Start/End: Original strand, 6332164 - 6332229
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaactttac 358  Q
    |||||| |||||||||||||||||||||||  || |||||||||| |||||| ||| |||||||||    
T  6332164 ttgttttaaaatgaatgtcactttacatttttaacacaactttaattttttttctttcaactttac 6332229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 30685482 - 30685543
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtca 313  Q
    ||||||| |||||||||||||||||||||||||        |||||||||||||||||||||    
T  30685482 ctccctctgtttcaaaatgagtgtcactttagcaaaaataatttgtttcaaaatgaatgtca 30685543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 9333105 - 9333168
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaacttt 356  Q
    |||||| ||||| ||||| |||||||||||| ||||||| ||||| |||||| |||||||||||    
T  9333105 ttgttttaaaataaatgttactttacatttctaatacaattttaattttttttcttccaacttt 9333168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 356
Target Start/End: Original strand, 9356878 - 9356941
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaacttt 356  Q
    |||||| ||||| ||||| |||||||||||| ||||||| ||||| |||||| |||||||||||    
T  9356878 ttgttttaaaataaatgttactttacatttctaatacaattttaattttttttcttccaacttt 9356941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 283
Target Start/End: Original strand, 50158232 - 50158263
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttag 283  Q
    ||||||||||||||||||||||||||||||||    
T  50158232 ctccctccgtttcaaaatgagtgtcactttag 50158263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 479
Target Start/End: Complemental strand, 50158342 - 50158276
Alignment:
Q  413 ttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||| || || ||||| |||||||||||||||||||| ||||||  |||  ||||||||||||    
T  50158342 ttataaagcaagggaagtttagtaaaagtgttatatccaatgattattgcattatatttcttaatct 50158276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Complemental strand, 50591381 - 50591336
Alignment:
Q  374 tcacacaattttcaatgcaactttaattttgtctttttcttataaa 419  Q
    |||||||||||||||||||| ||||| |||||||| ||| ||||||    
T  50591381 tcacacaattttcaatgcaattttaagtttgtcttgttcctataaa 50591336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 2459244 - 2459212
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  2459244 ctccctccgtttcaaaatgagtgtcgctttagc 2459212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 43105728 - 43105692
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaacttta 337  Q
    |||||||||||||| |||||||| |||||||||||||    
T  43105728 aaaatgaatgtcaccttacattttcaatacaacttta 43105692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 106; Significance: 8e-53; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 301 - 479
Target Start/End: Complemental strand, 12219 - 12040
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacacaattttcaatgcaacttta 398  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| | | ||||  |||||||||||||||||||||||||||    
T  12219 aaaatgaatgtcattttacatttccaatataactttaatttttttcttccaactttaccctctcaaacttttctctcacacaattttcaatgcaacttta 12120  T
Q  399 attttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    | ||||||||||||||||||||| |||||||||| ||||||||||||| || ||| ||||||| |||| ||| ||||||||    
T  12119 agtttgtctttttcttataaagt-aaggcagtttagtaaaagtgttatgtctaatgattatttcattccattccttaatct 12040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 11996 - 12028
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  11996 ctccctccgtttcaaaatgagtgtcgctttagc 12028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 3e-49; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 252 - 477
Target Start/End: Complemental strand, 1924860 - 1924634
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    ||||||| |||||||||||||||||||||||||        ||||||| ||||||||||||| ||||||||| ||||||||||||||||||||  ||| |    
T  1924860 ctccctctgtttcaaaatgagtgtcactttagccaaaaaaatttgttttaaaatgaatgtcattttacattttcaatacaactttaattttttttttc-a 1924762  T
Q  352 actttaccctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatc 449  Q
    |||| |||||| ||| ||||||||  |||||||||||||||||||||||||||||| |||| ||||||||||||  | ||||| ||||||  ||||||||    
T  1924761 acttcaccctctccaacttttctctcacacaattttcaatgcaactttaattttgtattttccttataaagtaagagaagtttagtaaaaacgttatatc 1924662  T
Q  450 caataattattttattcaatttcttaat 477  Q
    |||| ||||||| |||  ||||||||||    
T  1924661 caatgattatttcattatatttcttaat 1924634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 252 - 482
Target Start/End: Original strand, 29915496 - 29915740
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttag-ctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttc 349  Q
    |||| ||||||||||||||||||||||||||| |         |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  29915496 ctccatccgtttcaaaatgagtgtcactttagtcaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttc 29915595  T
Q  350 caactttaccctcc---------ccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaa-ggcagtttggtaa 437  Q
    |||||||||||||          ||| ||||||||  ||||||||| |||||||||||||  |||||||||||||||||||||||| |||||||| ||||    
T  29915596 caactttaccctcaataaatactccaacttttctctcacacaatttccaatgcaactttatgtttgtctttttcttataaagtaaatggcagtttagtaa 29915695  T
Q  438 aagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||| || ||| ||||||| ||||||||||||||| ||||    
T  29915696 aagtgttatttctaattattatttcattcaatttcttaatatgtg 29915740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 294 - 461
Target Start/End: Complemental strand, 12828835 - 12828657
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccc---------catcttttctc--acacaat 382  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||           || ||||||||  |||||||    
T  12828835 ttgtttcaaaatgaatttcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctctcacacaat 12828736  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattt 461  Q
    |||||||||||||||||  |||||||||||||||||||||| |||||||| ||||||||||||| || ||| |||||||    
T  12828735 tttcaatgcaactttaagcttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattattt 12828657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 299 - 479
Target Start/End: Complemental strand, 26669247 - 26669056
Alignment:
Q  299 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctcacaca--attttca 387  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  | |||||||||| ||||          ||| |||||||| ||||  |||||||    
T  26669247 tcaaaatgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctcacataattttca 26669148  T
Q  388 atgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||||  |||||||||||||||||||| |||  ||||||||||||    
T  26669147 atgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatatccaataattatttcattatatttcttaatct 26669056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 23936778 - 23936538
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    ||||||| |||||||||||||||||||||||||          ||||||||||||||||| ||||||||||| |||| ||||||| ||||||| ||||||    
T  23936778 ctccctctgtttcaaaatgagtgtcactttagcaaaaaaaaactgtttcaaaatgaatgttactttacattttcaatgcaactttcatttttttcttcca 23936679  T
Q  352 actttaccctcc---------ccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaa-ggcagtttggtaaaagt 441  Q
    |||||||||||          ||| | |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| |||| ||  |||||| |    
T  23936678 actttaccctcaatatatactccaacctttctctcacaattttcaatgcaactttaaatttgtttttttcttataaagtaaagggcaattcagtaaaaat 23936579  T
Q  442 gttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||||||| ||| ||||||| |||| |||||||||| ||||    
T  23936578 gttatatctaatgattatttcattccatttcttaatatgtg 23936538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 252 - 445
Target Start/End: Complemental strand, 31275838 - 31275633
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttcc 350  Q
    |||| ||||||||||||| |||||| |||||||         ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  31275838 ctccatccgtttcaaaataagtgtcgctttagcaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttcc 31275739  T
Q  351 aactttaccct---------cccca--tcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaa 439  Q
    |||||||||||         | |||  | ||||||||||||||||||||||||||||||| |||||||||||| ||||||  || |||||||||||||||    
T  31275738 aactttaccctcaataaatactccaacttttttctcacacaattttcaatgcaactttaagtttgtctttttcatataaaacaagggcagtttggtaaaa 31275639  T
Q  440 gtgtta 445  Q
    ||||||    
T  31275638 gtgtta 31275633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 294 - 482
Target Start/End: Original strand, 29927205 - 29927405
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa-ttttttccttccaactttaccct---------ccccatcttttctcaca--caa 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||         | ||| |||||||| ||   |     
T  29927205 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcatgtag 29927304  T
Q  382 ttttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgt 481  Q
    |||||||||||||||||| ||||||||||||||||||||||| |  |  || ||||||||||||| || ||| ||||||| |||| |||| |||||||||    
T  29927305 ttttcaatgcaactttaagtttgtctttttcttataaagtaaggatatgttagtaaaagtgttatgtctaatgattatttcattctattttttaatctgt 29927404  T
Q  482 g 482  Q
    |    
T  29927405 g 29927405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 294 - 482
Target Start/End: Original strand, 32258720 - 32258910
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct----------ccccatcttt---tctcacaca 380  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||          | ||| ||||   |||||||||    
T  32258720 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaacctaaaaaaaatactccaactttttctctcacaca 32258819  T
Q  381 attttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctg 480  Q
    |||||||||||||||||||||           |||||||| || |||||||| ||||||| |||||||||||| ||||||| | || |||||||||||||    
T  32258820 attttcaatgcaactttaatt-----------ttataaagcaagggcagtttagtaaaagcgttatatccaatgattatttcaatcgatttcttaatctg 32258908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 482
Target Start/End: Complemental strand, 11785255 - 11785057
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc---------cccatcttt--tctcacacaat 382  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||          | | ||||  |||||||||||    
T  11785255 ttgtttcaaaatga-tgtcactttacatttccaatacaactttaatttttt-cttccaactttaccctcaataaatattctaacttttctctcacacaat 11785158  T
Q  383 tttcaatgcaactttaattttgtc-tttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgt 481  Q
    ||||||| ||||||||| ||| || ||||| ||||||| ||||| ||||||  |||||||||||| || ||||| |||||||||  |||| ||||| |||    
T  11785157 tttcaatacaactttaaatttatcttttttattataaaataaagacagtttaataaaagtgttatgtctaataactattttattttattttttaatgtgt 11785058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 17345290 - 17345148
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 380  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||| |||| ||||||||||||||||         | ||| ||||    |||||||||    
T  17345290 ttgttttaaaatgaatatcactttacatttctaatacaactttaatatttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 17345191  T
Q  381 attttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||| || |||||||| ||||||||||||||    
T  17345190 attttcaatgcaacttgaagtttgtcttgttcttataaagtaa 17345148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 362
Target Start/End: Complemental strand, 4124009 - 4123941
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||    
T  4124009 ttgtttcaaaatgaatgtcactttacatttttaatacaactttaatttttttctttcaactttaccctc 4123941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 294 - 446
Target Start/End: Original strand, 34576542 - 34576707
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 380  Q
    |||||| ||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||         |  || ||||    |||||||||    
T  34576542 ttgttttaaaatgaatatcattttacatttccaatacaactttaatttttttcttccaactttatcctcaataaatacttcaacttttctctctcacaca 34576641  T
Q  381 attttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttat 446  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||  | ||| |||||| ||||||    
T  34576642 attttcaatgcaactttaagtttgtcttgttcttgtaaagtaaagttattttagtaaaattgttat 34576707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 359
Target Start/End: Original strand, 6143082 - 6143147
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  6143082 ttgttttaaaatgaatgtcattttacatttccaattcaactttaatttttttcttccaactttacc 6143147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 477
Target Start/End: Complemental strand, 34439567 - 34439368
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------cccca-----tcttttctc--ac 377  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||| |         | |||     |||||||||  ||    
T  34439567 ttgtttcaaaatgaatgtcattttacatttccaatacaactttcattcttt-cttccaactttaccttcaatatatactccaacttttcttttctcttac 34439469  T
Q  378 acaattttcaatgcaactttaattttgtctttttcttataaagtaaa-ggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaa 476  Q
    ||||||| |||||||||||||  ||||||||||||||||||| |||| |||| |||  ||||| ||||||||| ||| ||||||| |||  |||||||||    
T  34439468 acaatttccaatgcaactttatgtttgtctttttcttataaaataaagggcaatttaataaaaatgttatatctaatgattatttcatttcatttcttaa 34439369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 294 - 362
Target Start/End: Complemental strand, 4132129 - 4132061
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||| ||| |||||||||||||    
T  4132129 ttgttttaaaatgaatgtcactttacatttttaatacaactttaatttttttctttcaactttaccctc 4132061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 362
Target Start/End: Original strand, 30627056 - 30627157
Alignment:
Q  260 gtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    |||||| |||||||||||||||||||       ||||||||||||| |||||||||||| |||| |||||||||||||||||||| ||  ||||||||||    
T  30627056 gtttcataatgagtgtcactttagctaaaaaa-tttgtttcaaaataaatgtcactttatattttcaatacaactttaatttttttctctcaactttacc 30627154  T
Q  360 ctc 362  Q
    |||    
T  30627155 ctc 30627157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 294 - 359
Target Start/End: Original strand, 6140598 - 6140662
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||    
T  6140598 ttgttttaaaatgaatgtcgctttacatttccaattcaactttaatttttt-cttccaactttacc 6140662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 252 - 362
Target Start/End: Original strand, 26189464 - 26189574
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||| |||||||||||||||||||| ||||| |         ||||||||||||||||||   |||||||||||||| |||||||||| |||| ||||||    
T  26189464 ctccatccgtttcaaaatgagtgtcgctttaaccaaaaaaaattgtttcaaaatgaatgttgttttacatttccaatgcaactttaatatttttcttcca 26189563  T
Q  352 actttaccctc 362  Q
    |||||||||||    
T  26189564 actttaccctc 26189574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 10494916 - 10494854
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 356  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||| |||||||    
T  10494916 ttgttttaaaatgaatgtcagtttacatttccaattcaactttaatttttttctttcaacttt 10494854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 3015919 - 3015964
Alignment:
Q  299 tcaaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  3015919 tcaaaatgaatgtcactttacattttcaatacaactttaatttttt 3015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 8052343 - 8052410
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||||||||| || |||| |||||||||    
T  8052343 ttgttttaaaatgaatgtcactttatatttctaatacaactttaatttttt-ctcccaattttaccctc 8052410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 374 - 482
Target Start/End: Complemental strand, 4132008 - 4131903
Alignment:
Q  374 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttct 473  Q
    |||||||||||||||||||| || | ||||   ||||||||||||| |||||| ||||| |||||| ||||||||  ||| ||||||| |||  ||||||    
T  4132008 tcacacaattttcaatgcaatttaagtttt---tttttcttataaaataaaggtagtttagtaaaaatgttatatataatgattatttaattttatttct 4131912  T
Q  474 taatctgtg 482  Q
    |||| ||||    
T  4131911 taatatgtg 4131903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 438
Target Start/End: Complemental strand, 10494827 - 10494760
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtct-ttttcttataaagtaaaggcagtttggtaaa 438  Q
    ||||| ||||||||||||||||||| || ||||||| |||||||||||||||| || ||||| |||||    
T  10494827 tctcatacaattttcaatgcaacttaaagtttgtcttttttcttataaagtaagggtagtttagtaaa 10494760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 30626867 - 30626918
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc 345  Q
    |||||||||||| ||| | ||||||||||| |||||||||||||||||||||    
T  30626867 ttgtttcaaaataaatattactttacattttcaatacaactttaattttttc 30626918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 19689989 - 19689927
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttta 357  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||  | ||| ||||||||||||    
T  19689989 tttgttttaaaatgaatgttactttacatttctaatacaacttta--tattttcttccaacttta 19689927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 26189600 - 26189649
Alignment:
Q  375 cacacaattttcaatgcaactttaattttg-tctttttcttataaagtaa 423  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  26189600 cacacaattttcaatgcaactttaagtttgttttttttcttataaagtaa 26189649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 423
Target Start/End: Original strand, 25932718 - 25932769
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||||| |||||||| |||||||| ||  ||||||||||    
T  25932718 tctcacacaattttcaatgtaactttaagtttgtcttgttgctataaagtaa 25932769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 324
Target Start/End: Original strand, 19416857 - 19416887
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttc 324  Q
    |||||||||||||||||||||||||||||||    
T  19416857 ttgtttcaaaatgaatgtcactttacatttc 19416887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 423
Target Start/End: Original strand, 6992508 - 6992541
Alignment:
Q  390 gcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||| |||||||||||||||||||||||    
T  6992508 gcaactttaagtttgtctttttcttataaagtaa 6992541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 475
Target Start/End: Complemental strand, 19689858 - 19689809
Alignment:
Q  426 gcagtttggtaaaagtgttatatccaataattattttattcaatttctta 475  Q
    ||||||| |||||| ||||||||| ||||||||||| |||| ||||||||    
T  19689858 gcagtttagtaaaattgttatatctaataattatttcattccatttctta 19689809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 378 - 414
Target Start/End: Original strand, 30627184 - 30627220
Alignment:
Q  378 acaattttcaatgcaactttaattttgtctttttctt 414  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  30627184 acaattttcaatgcaactttaaatttgtttttttctt 30627220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 7e-47; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 252 - 424
Target Start/End: Complemental strand, 1774256 - 1774084
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||| ||||||| ||||||||||||||||||||         |||||| ||||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  1774256 ctccttccgttttaaaatgagtgtcactttagccaaaaaaaattgttttaaaatgaatgtcaatttacattttcaatacaactttaatttttttcttcca 1774157  T
Q  352 actttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaa 424  Q
    ||||||| ||| | | ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  1774156 actttacgctctctaacttttctcttacaattttcaatgcaactttaattttgtctttttcttataaagtaaa 1774084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 246 - 461
Target Start/End: Original strand, 22601086 - 22601311
Alignment:
Q  246 aagttgctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc 345  Q
    ||||| ||||||||||||||| |||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  22601086 aagttactccctccgtttcaagatgagtgtcactttagccaaaaagttttgtttcaaaatgaatgtcactttacatttccaatacaactttaattgttt- 22601184  T
Q  346 cttccaactttaccctc----------cccatcttt-tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttgg 434  Q
    |||||||||||||||||          || | |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||| || ||| |    
T  22601185 cttccaactttaccctcgataaatactccaacctttctctcacagaattttcaatgcaactttaagtttgtctttttcttataaagtaaagacaatttag 22601284  T
Q  435 taaaagtgttatatccaataattattt 461  Q
    |||||| ||||| || ||| |||||||    
T  22601285 taaaagagttatgtctaatgattattt 22601311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 252 - 482
Target Start/End: Original strand, 7612454 - 7612694
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||| ||| |||||||||||||||||| |         |||||| ||||||||||||||||||||||| ||||||||| |||| ||||  ||||||    
T  7612454 ctccctcccttttaaaatgagtgtcactttaacaaaaaaaaattgttttaaaatgaatgtcactttacattttcaatacaacattaagttttctcttcca 7612553  T
Q  352 actttaccct---------ccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaag 440  Q
    ||||||||||         | ||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||    
T  7612554 actttaccctaaataaatactccaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagt-aaag 7612652  T
Q  441 tgttatatccaataattattttattcaatttcttaatctgtg 482  Q
     |||||||||||| ||||||| |||| |||||||||||||||    
T  7612653 cgttatatccaatgattatttcattctatttcttaatctgtg 7612694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 260 - 453
Target Start/End: Complemental strand, 29931419 - 29931225
Alignment:
Q  260 gtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    |||||||||||||||||||||||||        || |||| ||||| ||| |||||||||||||||||||||||||||||||||| |||| ||||||||     
T  29931419 gtttcaaaatgagtgtcactttagcaaaaaaaatt-gttttaaaataaatatcactttacatttccaatacaactttaatttttttcttctaactttact 29931321  T
Q  360 ctccccatcttttctcacaca--attttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaat 453  Q
    ||| | | |||||||| ||||  ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||  |||||||||||||| ||||    
T  29931320 ctctcaaacttttctctcacataattttcaatgcaactttaattttttctttctcttataaaataaaggcagtttaataaaagtgttatattcaat 29931225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 293 - 482
Target Start/End: Complemental strand, 27109976 - 27109775
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacacaa 381  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||         | | | ||||  ||||||||||    
T  27109976 tttgtttcaaaatgaatgtcactttccatttccaatacaactttaatttttttcttccaactttaccctcaataaatactctaacttttctctcacacaa 27109877  T
Q  382 ttttcaatgcaactttaattttgtctttttcttataaagt-aaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctg 480  Q
    ||| |||||||||||||| |||||| |||||||||||||| |||| || ||| |||||||||||||||| ||| ||||||| |||| |||||||||| ||    
T  27109876 tttccaatgcaactttaagtttgtccttttcttataaagtaaaagacaatttagtaaaagtgttatatctaatgattatttcattctatttcttaatatg 27109777  T
Q  481 tg 482  Q
    ||    
T  27109776 tg 27109775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 252 - 482
Target Start/End: Complemental strand, 38329226 - 38329010
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||| |||||||||||||||||||||||||||         ||||||| |||||||||||||||||| |||| |||||||||||||||||||| ||| ||    
T  38329226 ctccttccgtttcaaaatgagtgtcactttagtcaaaaaaatttgttttaaaatgaatgtcactttatattttcaatacaactttaatttttttctttca 38329127  T
Q  352 actttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatcca 451  Q
    |||||||||||             |||||||||||||||||||||||| ||||||||||  ||||||||| |||||||||| ||||||||||||| || |    
T  38329126 actttaccctc-------------acacaattttcaatgcaactttaagtttgtcttttgattataaagt-aaggcagtttagtaaaagtgttatgtcta 38329041  T
Q  452 ataattattttattcaatttcttaatctgtg 482  Q
    || ||||||| |||| ||| |||||||||||    
T  38329040 atgattatttcattccattccttaatctgtg 38329010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 293 - 482
Target Start/End: Complemental strand, 45187440 - 45187251
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgca 392  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||||||||| |||  ||| ||| |||| | | |||||||| |||||||||||| |||    
T  45187440 tttgtttcaaaataaatgtcactttatattttcaatacaactttaatttttttcttttaacattatcctctctaacttttctctcacaattttcaaagca 45187341  T
Q  393 actttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||| |||||||||||||||||||  || | |||||| |||||||||| || || ||| ||||||| |||  ||| |||||||||||    
T  45187340 actttaagtttgtctttttcttataaaacaaggacagtttagtaaaagtgtcatgtctaatgattatttcattatattccttaatctgtg 45187251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 252 - 448
Target Start/End: Complemental strand, 18666717 - 18666534
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||||||||||||| ||||||||||         || |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  18666717 ctccctccgtttcaaaatgagtatcactttagcaaaaaaaaattctttcaaaatgaatgtcactttacatttccaatgcaactttagtttttttcttcca 18666618  T
Q  352 actttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatat 448  Q
    ||||| |             |||||||||||||| |||||||||||| | |||||||||||||||||||||| | |||||| |||||||||||||||    
T  18666617 acttttc-------------tctcacacaatttttaatgcaactttagtgttgtctttttcttataaagtaaggacagtttagtaaaagtgttatat 18666534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 252 - 482
Target Start/End: Original strand, 9022351 - 9022593
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||| ||||||||| ||| ||||||         |||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  9022351 ctccctccgttttaaaatgagtatcattttagccaaaaagaattgttttaaaatgaatgtcactttacgtttccaatacaactttaatttttttcttcca 9022450  T
Q  352 actttaccct---------cccca--tcttttctcacacaattttcaatgcaac-tttaattttgtctttttcttataaagtaaaggcagtttggtaaaa 439  Q
    ||||||||||         | |||  | |||||||||||||||||||||||||| ||||| |||||||||||| ||||||  ||  ||||||| ||||||    
T  9022451 actttaccctcaataaatactccaacttttttctcacacaattttcaatgcaacttttaagtttgtctttttcatataaaacaagtgcagtttagtaaaa 9022550  T
Q  440 gtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||| || ||| |||| || |||| |||| ||||||||||    
T  9022551 gtgttatgtctaatgattaattcattccattttttaatctgtg 9022593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 257 - 459
Target Start/End: Original strand, 7129262 - 7129451
Alignment:
Q  257 tccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttt 356  Q
    |||||||||||||||||||||||||| |         || ||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  7129262 tccgtttcaaaatgagtgtcactttaacaaaaaaaaattatttcaaaatgaatgtcactttacattttcaatgcaactttaatttttttcttccaacttt 7129361  T
Q  357 accctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataat 456  Q
     |             ||||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||||| ||||||| ||||||| |||| ||    
T  7129362 tc-------------tctcacacaatttccaatgcaactttaattttgtcttattcttataaagtaaaatcagtttagtaaaagcgttatattcaatgat 7129448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 299 - 423
Target Start/End: Complemental strand, 34168355 - 34168226
Alignment:
Q  299 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcccca-----tcttttctcacacaattttcaatgcaa 393  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||   |     |||| ||||||||||||||||||||||    
T  34168355 tcaaaatgaatgtcactttacattttcaatacaactttaacttttttcttccaactttaccctcaagaaatactcttctctcacacaattttcaatgcaa 34168256  T
Q  394 ctttaattttgtctttttcttataaagtaa 423  Q
    |||||| |||||||| ||||||||||||||    
T  34168255 ctttaagtttgtcttgttcttataaagtaa 34168226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 252 - 423
Target Start/End: Original strand, 8471237 - 8471397
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    ||||||||||||||||||||||| | |||||||         ||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  8471237 ctccctccgtttcaaaatgagtgccgctttagccaaaaaaaattgtttcaaaatgaatgtcgctttacatttccaatgcaactttaatttttttcttcca 8471336  T
Q  352 actttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||| |           | |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8471337 acttttc-----------tctctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaa 8471397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 297 - 446
Target Start/End: Original strand, 16208951 - 16209102
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacacaattttcaatgcaac 394  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| |||  || |||||||||  || ||||  ||||||| |||||||||||||||    
T  16208951 tttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttaaattttaccctctacaacttttctctcacataattttcaatgcaac 16209050  T
Q  395 tttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttat 446  Q
    ||||| |||||||||||| |||||| ||| | ||| ||  ||||||||||||    
T  16209051 tttaagtttgtctttttcctataaaataaggacagattaataaaagtgttat 16209102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 294 - 481
Target Start/End: Original strand, 36915365 - 36915561
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc---------cccatcttttctcacacaattt 384  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||          | |  |||| || ||||||||    
T  36915365 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccttcaataaatattcaacattttttctcacaattt 36915464  T
Q  385 tcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgt 481  Q
    ||||||||||||||| |||||||||||| ||||||  || |||| ||| |||||| | |||| || ||| ||||||| |||| ||| ||||||||||    
T  36915465 tcaatgcaactttaagtttgtctttttcatataaaacaagggcaatttagtaaaaatattatgtctaatgattatttcattccattccttaatctgt 36915561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 294 - 482
Target Start/End: Original strand, 6839215 - 6839404
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacaca--attttcaatgc 391  Q
    |||||| ||||||||| | |||||||||||  || | ||||||||||||||  ||  ||||||| | |  ||| |||||||| ||||  |||||||||||    
T  6839215 ttgttttaaaatgaattttactttacatttttaaaataactttaattttttttttt-aactttatcatttccaacttttctctcacataattttcaatgc 6839313  T
Q  392 aactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    || ||||  |||||||||||||||||||||||||||| ||| ||||||||||||| || ||| ||||||| |||| |||| ||||||||||    
T  6839314 aattttatgtttgtctttttcttataaagtaaaggcaatttagtaaaagtgttatgtctaatgattatttcattccattttttaatctgtg 6839404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 373 - 479
Target Start/End: Original strand, 2067788 - 2067894
Alignment:
Q  373 ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttc 472  Q
    ||||||||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||  |||||| |||||||| ||| ||||||| |||| |||||    
T  2067788 ctcacacaatttttaatgcaactttaatttggtcttttccttataaagtaagggcagtttaataaaagcgttatatcaaatgattatttcattccatttc 2067887  T
Q  473 ttaatct 479  Q
    |||||||    
T  2067888 ttaatct 2067894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 252 - 415
Target Start/End: Complemental strand, 2803433 - 2803268
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt---cctt 348  Q
    |||| ||||||||| ||||||||||| |||||||       ||||||||||||| ||||||||||||||||| |||||||| |||||||||||   |||     
T  2803433 ctccatccgtttcataatgagtgtcattttagctaaaaaa-tttgtttcaaaataaatgtcactttacattttcaatacaattttaattttttctccctc 2803335  T
Q  349 ccaactttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttctta 415  Q
    |||||||||||||||   | || |||  ||||||||||||| ||||||||| |||||||||||||||    
T  2803334 ccaactttaccctccaacttttctcttgcacaattttcaattcaactttaagtttgtctttttctta 2803268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 294 - 423
Target Start/End: Complemental strand, 14541900 - 14541760
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacacaat 382  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||         |  || ||||  |||| ||||||    
T  14541900 ttgtttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaactttatccttaataaatacttcaacttttctctctcacaat 14541801  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  14541800 tttcaatgcaactttaagtttgtcttgttcttataaagtaa 14541760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 252 - 425
Target Start/End: Original strand, 26438932 - 26439104
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttcc 350  Q
    ||||||||||||||| ||||||||||||||||         ||| ||| |||||||||| ||||||||||||||| |||||||||||||||||  |||||    
T  26438932 ctccctccgtttcaacatgagtgtcactttagg-caaaaaatttattttaaaatgaatgccactttacatttcca-tacaactttaattttttttcttcc 26439029  T
Q  351 aactttaccctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaaag 425  Q
    ||||||| |||| | | ||||||||  |||||||||||||||||||||||| ||||  ||||| |||||||||||||    
T  26439030 aactttatcctctcaaacttttctctcacacaattttcaatgcaactttaagtttg--tttttgttataaagtaaag 26439104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 299 - 482
Target Start/End: Complemental strand, 32326875 - 32326680
Alignment:
Q  299 tcaaaatgaatgtcactttacatttccaatacaactttaatttttt-ccttccaactttaccc-----------tccccatcttttctcacacaattttc 386  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||| |||| ||| |||||||           |||   | ||||||||||||||||||    
T  32326875 tcaaaataaatgtcactttacattttcaatacaactttaatttttttcctttcaattttacccacaataaatactccaacttttttctcacacaattttc 32326776  T
Q  387 aatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||||||| |||||||||||| ||||||  || |||||||| ||||||||||||  || ||| ||||||| |||  ||| |||||||||||    
T  32326775 aatgcaactttaaatttgtctttttcatataaaacaagggcagtttagtaaaagtgttacgtctaatgattatttcatttcattccttaatctgtg 32326680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 294 - 414
Target Start/End: Original strand, 156239 - 156358
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 393  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||| || ||||||||||  ||| | | || |||| ||||||||||||| |||    
T  156239 ttgtttcaaaatgaatgtcactttacattcccaatataactttaatttttttctcccaactttactttccac-ttttctctcgcacaattttcaatacaa 156337  T
Q  394 ctttaattttgtctttttctt 414  Q
    |||||| |||||| |||||||    
T  156338 ctttaagtttgtccttttctt 156358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 295 - 461
Target Start/End: Original strand, 30788934 - 30789111
Alignment:
Q  295 tgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttttctcacaca--att 383  Q
    ||||| ||||| ||||||||||||||| | |||||||||||||||||||| |||| |||||||||||         | ||| |||||||| ||||  |||    
T  30788934 tgttttaaaataaatgtcactttacatattcaatacaactttaatttttttcttctaactttacccttagtaaatactccaacttttctctcacataatt 30789033  T
Q  384 ttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattt 461  Q
    |||||| ||||||||| ||||||||||||||||||||||| | || |||  |||||||||||| || ||| |||||||    
T  30789034 ttcaatacaactttaaatttgtctttttcttataaagtaaggacaatttaataaaagtgttatgtctaatgattattt 30789111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 294 - 482
Target Start/End: Original strand, 11257540 - 11257736
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccc---------catcttttctc--acacaat 382  Q
    |||||| |||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||  |||           || ||||||||  |||||||    
T  11257540 ttgttttaaaatgaatgtcactttacatttttaatacaactttaattttt--cttccaactttaatctcaataaatacttcaacttttctctcacacaat 11257637  T
Q  383 tttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||| ||||| |||||| |||| | |  ||||||||||| |||| |||||||||| ||||    
T  11257638 tttcaatgcaactttaagtttgtctgtttcttataaaataaaggtagtttagtaaaaatgtt-tttttaataattatttcattccatttcttaatttgtg 11257736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 296 - 423
Target Start/End: Complemental strand, 34461737 - 34461596
Alignment:
Q  296 gtttcaaaatgaatgtcactttacatttccaatacaactttaatt-ttttccttccaactttaccct---------ccccatcttt----tctcacacaa 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||         | ||| ||||    ||||||||||    
T  34461737 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaaaactccaacttttctgtctcacacaa 34461638  T
Q  382 ttttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||||| |||||||| ||| | ||||||||    
T  34461637 ttttcaatgcaactttaagtttgtcttgttcatgtaaagtaa 34461596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 372 - 482
Target Start/End: Complemental strand, 11336098 - 11335994
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaattt 471  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||||| |||  ||| || |||  ||||    
T  11336098 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa------tttagtaaaagtgttatatcgaatggttacttcattacattt 11336005  T
Q  472 cttaatctgtg 482  Q
    |||||||||||    
T  11336004 cttaatctgtg 11335994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 298 - 461
Target Start/End: Complemental strand, 41790268 - 41790117
Alignment:
Q  298 ttcaaaatgaatgtcactttacatttccaatacaactttaattttttc-cttccaactttaccctccccatcttttctcacacaattttcaatgcaactt 396  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||  ||| ||||||| |             |||||||||||||||||| ||||||    
T  41790268 ttcaaaatgaatgtcactttacatttctaatacaactttaattttttttctttcaacttttc-------------tctcacacaattttcaatccaactt 41790182  T
Q  397 taattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattt 461  Q
    ||| |||||||||||||||||||| |||| || |||  ||||||| |||| || ||| |||||||    
T  41790181 taaatttgtctttttcttataaagcaaagacaatttaataaaagtattatgtctaatgattattt 41790117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 252 - 356
Target Start/End: Original strand, 35052427 - 35052531
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    ||||||||||||||||||||||||| |||||||         |||||| ||||||||||||  |||||||||||||||||||||||||||||| ||| ||    
T  35052427 ctccctccgtttcaaaatgagtgtcgctttagcaaaaaaaaattgttttaaaatgaatgtcgttttacatttccaatacaactttaatttttttctttca 35052526  T
Q  352 acttt 356  Q
    |||||    
T  35052527 acttt 35052531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 296 - 362
Target Start/End: Complemental strand, 3095656 - 3095590
Alignment:
Q  296 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  3095656 gttttaaaatgaatgttactttacattttcaatacaactttaattttttcctcccaactttaccctc 3095590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 294 - 359
Target Start/End: Complemental strand, 5588628 - 5588563
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  5588628 ttgttttaaactgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttacc 5588563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 414
Target Start/End: Complemental strand, 8382625 - 8382501
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacacaattttcaat 389  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||||||         | ||| ||||  ||||||||||||||||||    
T  8382625 aaaatgaatgtcactttacattttcaatacaactttaatttttttctctcaactttaccctcaatatatactccaacttttctctcacacaattttcaat 8382526  T
Q  390 gcaactttaattttgtctttttctt 414  Q
    |||||| ||| ||||||||||||||    
T  8382525 gcaactataagtttgtctttttctt 8382501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 445
Target Start/End: Original strand, 41414847 - 41414992
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatctttt--ctcacacaattttcaatgcaacttta 398  Q
    ||||| |||||||||||| ||||  ||||  ||||||||||||| ||||||| |||||| ||| || |||||  ||||||||||||||||||||||||||    
T  41414847 aaaataaatgtcactttatatttttaatatcactttaatttttttcttccaattttaccttcctcaacttttttctcacacaattttcaatgcaacttta 41414946  T
Q  399 attttgtctttttcttataaagtaaaggcagtttggtaaaagtgtta 445  Q
    |  || |  |||| ||||||| ||| ||||| || ||||||||||||    
T  41414947 agcttattatttttttataaaataagggcag-ttagtaaaagtgtta 41414992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 415
Target Start/End: Complemental strand, 8107304 - 8107191
Alignment:
Q  304 atgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctccccatcttt--tctcacacaattttcaatgcaactttaatt 401  Q
    |||||||||||||||||||| ||||||||||||||||||||  ||  || ||||  ||| ||| ||||  ||||| ||||||||||||  |||||||| |    
T  8107304 atgaatgtcactttacattttcaatacaactttaatttttttttttaaattttattctctccaacttttctctcagacaattttcaatagaactttaaat 8107205  T
Q  402 ttgtctttttctta 415  Q
    ||||||||||||||    
T  8107204 ttgtctttttctta 8107191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 27416502 - 27416565
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||||||||||    
T  27416502 tttcaaaatgaatgtcactttacatttccaatacaactttagttttt--cgtccaactttaccctc 27416565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 481
Target Start/End: Original strand, 32737861 - 32737961
Alignment:
Q  380 aattttcaatgcaactttaattttgtctttttcttataaagtaaa-ggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatc 478  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||| ||||||||   |||||||||||||| ||| | ||||| ||||||||||||||||    
T  32737861 aattttcaatgcaa-tttaagtttttctttttcttataaagtaaagggcagtttaacaaaagtgttatatctaatga-tatttcattcaatttcttaatc 32737958  T
Q  479 tgt 481  Q
    |||    
T  32737959 tgt 32737961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 297 - 359
Target Start/End: Original strand, 33870755 - 33870817
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    |||||||||| ||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  33870755 tttcaaaatggatgtcactttatattttcaatacaactttaatttttttcttccaactttacc 33870817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 39970323 - 39970390
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||||||||||||||| ||||||||||||||||||||| ||| |||||| || ||||||||||||||    
T  39970323 ttgtttcaaaatgaatgttactttacatttccaatacaacattagtttttt-ctcccaactttaccctc 39970390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 24732079 - 24732144
Alignment:
Q  416 taaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgt 481  Q
    |||||||  |||||||| |||||||||||||||||||| | ||||| |||||||||||||||||||    
T  24732079 taaagtaggggcagtttagtaaaagtgttatatccaatgactatttcattcaatttcttaatctgt 24732144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 301 - 362
Target Start/End: Original strand, 32661310 - 32661371
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    ||||||||||| ||| ||||||| |||||||||||||||||||| || ||||||||||||||    
T  32661310 aaaatgaatgttactctacattttcaatacaactttaatttttttctcccaactttaccctc 32661371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 42946120 - 42946188
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||| ||||||||||||| |||||||||  ||||||||||||||||||| ||| ||| |||||||||    
T  42946120 ttgttttaaaatgaatgtcattttacatttttaatacaactttaatttttttctttcaattttaccctc 42946188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 32061578 - 32061515
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttta 357  Q
    |||||| ||||||||||||||||||||||| | |||||| ||||||| ||| ||||||||||||    
T  32061578 ttgttttaaaatgaatgtcactttacattttctatacaaatttaattattttcttccaacttta 32061515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 297 - 419
Target Start/End: Original strand, 13108989 - 13109123
Alignment:
Q  297 tttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt----tctcacacaatt 383  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||||| ||||||||| || |||         | ||| ||||    ||||||||||||    
T  13108989 tttcaaaatgaatgtcattttacattttcaatgcaactttaatttttt-cttccaactctatccttaataaatactccaacttttctctctcacacaatt 13109087  T
Q  384 ttcaatgcaactttaattttgtctttttcttataaa 419  Q
    || ||||||| ||||| |||||||||||||||||||    
T  13109088 tttaatgcaaatttaaatttgtctttttcttataaa 13109123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 18673247 - 18673189
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttacc 359  Q
    |||||||||||| |||||||||| |||| | ||||||||||||| ||||||||||||||    
T  18673247 aaaatgaatgtcgctttacattttcaatgcgactttaatttttttcttccaactttacc 18673189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Original strand, 27416593 - 27416641
Alignment:
Q  375 cacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||    
T  27416593 cacacaattttcaatgcaattctaagtttgtctttttcttataaagtaa 27416641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 414
Target Start/End: Original strand, 39970412 - 39970454
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttctt 414  Q
    |||| ||||||||||||||||||||||| ||||||||||||||    
T  39970412 tctcgcacaattttcaatgcaactttaagtttgtctttttctt 39970454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 303 - 344
Target Start/End: Original strand, 2812817 - 2812858
Alignment:
Q  303 aatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    |||||||||  |||||||||||||||||||||||||||||||    
T  2812817 aatgaatgttgctttacatttccaatacaactttaatttttt 2812858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 374 - 446
Target Start/End: Complemental strand, 5044290 - 5044218
Alignment:
Q  374 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttat 446  Q
    |||||||||||| ||| ||||||||| ||||| ||||| |||||||||||  |||||||  ||||||| ||||    
T  5044290 tcacacaatttttaatacaactttaaatttgtattttttttataaagtaagagcagtttaataaaagtattat 5044218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 478
Target Start/End: Complemental strand, 42710048 - 42709949
Alignment:
Q  378 acaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaat 477  Q
    ||||||||||| |||||||||||||| ||||||| | ||||||||| |  ||||| ||  |||||| || || ||| || |||||||| |||||||||||    
T  42710048 acaattttcaacgcaactttaattttatctttttttaataaagtaaggatagtttagt-caagtgtcatgtctaatgataattttatttaatttcttaat 42709950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 3203325 - 3203368
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaacttta 337  Q
    |||||||||||| ||||||||||||||||| |||| ||||||||    
T  3203325 ttgtttcaaaataaatgtcactttacattttcaatgcaacttta 3203368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 479
Target Start/End: Complemental strand, 5588512 - 5588426
Alignment:
Q  392 aactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||| ||||||||||||||||||| |  ||||||||| |||||| |||||| |  ||| ||||||| |||  ||||||||||||    
T  5588512 aactttaagtttgtctttttcttataaa-ttgaggcagtttagtaaaaatgttatgtttaatgattatttcattatatttcttaatct 5588426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 344
Target Start/End: Original strand, 43938125 - 43938168
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||    
T  43938125 aaaatgaatgccactttacatttcgaatagaactttaatttttt 43938168  T

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Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 2067725 - 2067770
Alignment:
Q  298 ttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||||    
T  2067725 ttcaaaatgaatgtca-tttacattttcaatacaattttaatttttt 2067770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 323
Target Start/End: Original strand, 11335839 - 11335869
Alignment:
Q  293 tttgtttcaaaatgaatgtcactttacattt 323  Q
    |||||||||||||||||||||||||||||||    
T  11335839 tttgtttcaaaatgaatgtcactttacattt 11335869  T

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Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 410
Target Start/End: Original strand, 32661392 - 32661430
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttt 410  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  32661392 tctcacacaattttcaatacaactttaagtttgtctttt 32661430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 477
Target Start/End: Original strand, 2812916 - 2812968
Alignment:
Q  425 ggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaat 477  Q
    |||||||| ||||||||||||| || ||| ||||||| |||||||| ||||||    
T  2812916 ggcagtttagtaaaagtgttatgtctaatgattatttcattcaattacttaat 2812968  T

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Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 11165484 - 11165516
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    |||||||||||| ||||||||||||||||||||    
T  11165484 ctccctccgttttaaaatgagtgtcactttagc 11165516  T

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Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 11168922 - 11168890
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  11168922 ctccctccgtttcaaaatgagtgtcgctttagc 11168890  T

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Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Original strand, 34168126 - 34168158
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  34168126 ctccctccgtttcaaaatgagtgtcgctttagc 34168158  T

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Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 39463496 - 39463464
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagc 284  Q
    ||||||||||||||||||||||||| |||||||    
T  39463496 ctccctccgtttcaaaatgagtgtcgctttagc 39463464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 299 - 479
Target Start/End: Original strand, 1546 - 1737
Alignment:
Q  299 tcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctcc---------ccatcttttctcacaca--attttca 387  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  | |||||||||| ||||          ||| |||||||| ||||  |||||||    
T  1546 tcaaaatgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctcacataattttca 1645  T
Q  388 atgcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||||  |||||||||||||||||||| |||  ||||||||||||    
T  1646 atgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatatccaataattatttcattatatttcttaatct 1737  T

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Target: scaffold0047 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 252 - 423
Target Start/End: Complemental strand, 70651 - 70467
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||||||||||||||||||||||||  ||||||         |||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  70651 ctccctccgtttcaaaatgagtgtcgttttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatgcaactttaatttttttcttcca 70552  T
Q  352 actttaccct---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    ||||||||||         | ||| ||||    |||||||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  70551 actttaccctcaataaatactccaacttttctctctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaa 70467  T

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Target: scaffold0238 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 301 - 482
Target Start/End: Complemental strand, 16186 - 15995
Alignment:
Q  301 aaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc----------cccatcttt-tctcacacaattttcaat 389  Q
    ||||| |||||| ||||| ||||  ||||||||||||||||||| |||| ||||||||||||          || | |||| ||||||||||||||||||    
T  16186 aaaataaatgtctctttatatttttaatacaactttaatttttttcttcaaactttaccctcaataaatattccaacctttctctcacacaattttcaat 16087  T
Q  390 gcaactttaattttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||||||||| |||||| |||| |||||||||||||| ||||| |||||| ||||||||  ||| ||||||| ||| ||||| ||||| ||||    
T  16086 gcaactttaagtttgtcatttt-ttataaagtaaaggtagtttagtaaaaatgttatatataatgattatttcatttaattttttaatatgtg 15995  T

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Target: scaffold0003 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 321724 - 321792
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctc 362  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  321724 ttgttttaaaatgaatgtcgctttacatttccaatacaactttaatttttttcttccaactttaccctc 321792  T

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Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 423
Target Start/End: Original strand, 321815 - 321866
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 423  Q
    |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||    
T  321815 tctcacacaattttcaatgcaattttaagtttgtcttgttcctataaagtaa 321866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 252 - 415
Target Start/End: Complemental strand, 13255 - 13081
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttcca 351  Q
    |||| |||||||||||||||||||||||||| |         |||||| |||||||| ||||||||||||||||||||||| ||||||||||| || |||    
T  13255 ctccttccgtttcaaaatgagtgtcactttaaccaaaaaaaattgttttaaaatgaacgtcactttacatttccaatacaattttaatttttttctccca 13156  T
Q  352 actttaccct---------ccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttctta 415  Q
    ||||||||||         |  || ||||||||   |||||||||||||| ||||||||||||||||||||||||    
T  13155 actttaccctcaataaatacttcaacttttctccggcacaattttcaatgtaactttaattttgtctttttctta 13081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 51; Significance: 5e-20; HSPs: 4)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 252 - 344
Target Start/End: Original strand, 1597 - 1691
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttcc--aatacaactttaatttttt 344  Q
    |||||||||||||||||||||||||||||||||         || |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  1597 ctccctccgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaatgtcactttacatttccaaaatacaactttaatttttt 1691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 252 - 344
Target Start/End: Original strand, 9336 - 9430
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagctnnnnnnntttgtttcaaaatgaatgtcactttacatttcc--aatacaactttaatttttt 344  Q
    |||||||||||||||||||||||||||||||||         || |||||||||||||||||||||||||||||  |||||||||||||||||||    
T  9336 ctccctccgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaatgtcactttacatttccaaaatacaactttaatttttt 9430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 1689 - 1768
Alignment:
Q  400 ttttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||||||||||||||||||| | |||||| |||||| ||||||||||||| ||||||| |||  ||||||||||||    
T  1689 ttttgtctttttcttataaagtaaggtcagtttagtaaaaatgttatatccaatgattatttcatttcatttcttaatct 1768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 400 - 479
Target Start/End: Original strand, 9428 - 9507
Alignment:
Q  400 ttttgtctttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatct 479  Q
    |||||||||||||||||||||||| | |||||| |||||| ||||||||||||| ||||||| |||  ||||||||||||    
T  9428 ttttgtctttttcttataaagtaaggtcagtttagtaaaaatgttatatccaatgattatttcatttcatttcttaatct 9507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 294 - 344
Target Start/End: Original strand, 8156 - 8206
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttt 344  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  8156 ttgtttcaaaatgaatgtcaatttacattttcaatacaactttaatttttt 8206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 482
Target Start/End: Original strand, 8277 - 8346
Alignment:
Q  413 ttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgtg 482  Q
    |||||||| || |||||||| |||||||  ||||||||||| ||||||| |||| |||| ||||||||||    
T  8277 ttataaagcaagggcagtttagtaaaagccttatatccaatgattatttcattccattttttaatctgtg 8346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 482
Target Start/End: Complemental strand, 4263 - 4063
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccct---------ccccatcttt--tctcacacaat 382  Q
    |||||| ||||| ||||| |||||||||||| ||||||| ||||||||||| |||||||||||| |||         | ||| ||||  ||||||| |||    
T  4263 ttgttttaaaataaatgttactttacatttctaatacaattttaatttttttcttccaactttatcctcaataaatactccaacttttctctcacataat 4164  T
Q  383 tttcaatgcaactttaattttgtc-tttttcttataaagtaaaggcagtttggtaaaagtgttatatccaataattattttattcaatttcttaatctgt 481  Q
    |||||||  |||||||| |||||| ||||| ||||||||||| | || ||| |||||| |||||| |  ||| ||| ||| |||| |||||||||| |||    
T  4163 tttcaatcaaactttaagtttgtcattttttttataaagtaaggacaatttcgtaaaaatgttatgtataatgattgtttcattccatttcttaatatgt 4064  T
Q  482 g 482  Q
    |    
T  4063 g 4063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 357
Target Start/End: Complemental strand, 7852 - 7791
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaacttta 357  Q
    |||||| |||||||||||||||||||||||  ||||||||||| | ||||| ||||||||||||    
T  7852 ttgttttaaaatgaatgtcactttacattt-taatacaacttttaattttt-cttccaacttta 7791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 405
Target Start/End: Complemental strand, 7765 - 7732
Alignment:
Q  372 tctcacacaattttcaatgcaactttaattttgt 405  Q
    |||||||||||||||||||||||||||| |||||    
T  7765 tctcacacaattttcaatgcaactttaagtttgt 7732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 414
Target Start/End: Original strand, 158195 - 158229
Alignment:
Q  380 aattttcaatgcaactttaattttgtctttttctt 414  Q
    |||||||||||||||||||| ||||||||||||||    
T  158195 aattttcaatgcaactttaagtttgtctttttctt 158229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 6241 - 6274
Alignment:
Q  252 ctccctccgtttcaaaatgagtgtcactttagct 285  Q
    |||| |||||||||||||||||||||||||||||    
T  6241 ctccttccgtttcaaaatgagtgtcactttagct 6274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 338
Target Start/End: Original strand, 31623 - 31667
Alignment:
Q  294 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaa 338  Q
    |||||| ||||||||||| ||||||||||||||||| || |||||    
T  31623 ttgttttaaaatgaatgttactttacatttccaataaaattttaa 31667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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