View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20539_high_69 (Length: 247)
Name: NF20539_high_69
Description: NF20539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20539_high_69 |
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Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 23506544 - 23506772
Alignment:
| Q |
1 |
ttcaagtaaccatcatcatttataacaaaagccctgaatagtaggtaatctttgtaagttgggataaaatcaaatatatgccatctacttcataataatt |
100 |
Q |
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| T |
23506544 |
ttcaagtaaccatcatcatttataacaaaagccctgaatagtaggtaatctttgtaagttgggataaaatcaaatatatgccatctacttcataataatt |
23506643 |
T |
|
| Q |
101 |
tgcaaagcaagggcatttttggcaatgaaaaacaaactctacatgagtatcccaaatctaaagtcccctacattgtatataaggaagcctctttagtccc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
23506644 |
tgcaaagcaagggcatttttggcaatgaaaaacaaactatacatgagtatcccaaatctaaagtctcctacattgtatataaggaagcctctttagtccc |
23506743 |
T |
|
| Q |
201 |
acctcatacaagtttacaatcaccattta |
229 |
Q |
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|||||||||||||| |||||||||||||| |
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| T |
23506744 |
acctcatacaagttgacaatcaccattta |
23506772 |
T |
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