View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20539_high_72 (Length: 242)

Name: NF20539_high_72
Description: NF20539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20539_high_72
NF20539_high_72
[»] chr8 (40 HSPs)
chr8 (19-239)||(31132585-31132805)
chr8 (58-238)||(5391943-5392123)
chr8 (65-238)||(32241457-32241632)
chr8 (105-238)||(33190942-33191074)
chr8 (57-238)||(44790455-44790635)
chr8 (58-238)||(38252471-38252650)
chr8 (57-150)||(138928-139020)
chr8 (57-238)||(32967310-32967490)
chr8 (57-238)||(2119610-2119790)
chr8 (56-151)||(34132974-34133069)
chr8 (57-229)||(14689854-14690025)
chr8 (163-225)||(33925130-33925192)
chr8 (58-238)||(42412416-42412595)
chr8 (108-238)||(2349295-2349424)
chr8 (93-238)||(5962506-5962651)
chr8 (109-238)||(44615398-44615526)
chr8 (163-229)||(28791307-28791373)
chr8 (108-238)||(34133072-34133201)
chr8 (56-229)||(2796932-2797105)
chr8 (65-238)||(21587178-21587351)
chr8 (163-239)||(28802766-28802842)
chr8 (93-234)||(29615728-29615868)
chr8 (105-231)||(39171485-39171610)
chr8 (167-239)||(42558613-42558685)
chr8 (163-229)||(2195467-2195533)
chr8 (163-229)||(7258409-7258475)
chr8 (163-229)||(14117461-14117527)
chr8 (163-241)||(27987657-27987735)
chr8 (163-241)||(28044959-28045037)
chr8 (109-232)||(31410647-31410769)
chr8 (109-150)||(29730988-29731029)
chr8 (163-239)||(4274331-4274407)
chr8 (118-150)||(4480564-4480596)
chr8 (166-229)||(10728964-10729027)
chr8 (65-148)||(34287201-34287284)
chr8 (121-229)||(41726479-41726586)
chr8 (109-151)||(26570278-26570320)
chr8 (169-230)||(139027-139088)
chr8 (206-238)||(9014745-9014777)
chr8 (118-150)||(22325075-22325107)
[»] chr5 (49 HSPs)
chr5 (58-241)||(42575669-42575851)
chr5 (55-238)||(8369730-8369913)
chr5 (107-238)||(8692852-8692982)
chr5 (56-238)||(35646123-35646305)
chr5 (58-238)||(22582906-22583085)
chr5 (105-238)||(11099511-11099643)
chr5 (57-238)||(3725081-3725260)
chr5 (58-231)||(39008025-39008195)
chr5 (109-238)||(858281-858409)
chr5 (163-239)||(35334559-35334635)
chr5 (56-229)||(5357860-5358032)
chr5 (69-148)||(41686614-41686693)
chr5 (58-238)||(6610730-6610911)
chr5 (98-239)||(17242987-17243126)
chr5 (164-238)||(6735391-6735465)
chr5 (107-242)||(42211276-42211411)
chr5 (109-238)||(13135699-13135827)
chr5 (121-238)||(39183661-39183776)
chr5 (58-151)||(4044596-4044690)
chr5 (65-151)||(16926209-16926295)
chr5 (65-151)||(33012256-33012342)
chr5 (163-241)||(33988199-33988277)
chr5 (56-151)||(13716900-13716998)
chr5 (163-238)||(32539661-32539736)
chr5 (65-151)||(7276286-7276371)
chr5 (108-150)||(15814608-15814650)
chr5 (57-234)||(25814254-25814434)
chr5 (109-188)||(4412329-4412407)
chr5 (98-151)||(30437861-30437914)
chr5 (75-150)||(13422472-13422548)
chr5 (170-238)||(36446721-36446789)
chr5 (165-229)||(38978905-38978969)
chr5 (108-151)||(14259612-14259655)
chr5 (163-238)||(15254764-15254839)
chr5 (163-238)||(16283621-16283696)
chr5 (163-238)||(36469128-36469203)
chr5 (122-229)||(7871272-7871378)
chr5 (66-116)||(19817119-19817169)
chr5 (163-229)||(19889576-19889642)
chr5 (163-229)||(25111191-25111257)
chr5 (163-229)||(25170282-25170348)
chr5 (163-229)||(36006935-36007001)
chr5 (163-229)||(39212594-39212660)
chr5 (93-151)||(41184047-41184105)
chr5 (163-229)||(43525477-43525543)
chr5 (86-151)||(20369199-20369263)
chr5 (121-150)||(36446798-36446827)
chr5 (121-150)||(36469219-36469248)
chr5 (54-90)||(43525371-43525407)
[»] chr2 (39 HSPs)
chr2 (54-238)||(3100290-3100474)
chr2 (56-238)||(28572104-28572282)
chr2 (54-238)||(44534516-44534702)
chr2 (52-231)||(5211998-5212174)
chr2 (108-242)||(41436024-41436157)
chr2 (58-225)||(7213370-7213536)
chr2 (56-150)||(43077845-43077941)
chr2 (58-234)||(30757605-30757779)
chr2 (58-238)||(18181246-18181426)
chr2 (65-150)||(24451684-24451770)
chr2 (107-238)||(28108408-28108539)
chr2 (118-225)||(15859388-15859494)
chr2 (57-188)||(40964947-40965076)
chr2 (163-239)||(28301433-28301509)
chr2 (109-238)||(7650008-7650136)
chr2 (98-238)||(10818555-10818695)
chr2 (163-238)||(23684958-23685033)
chr2 (55-188)||(33751353-33751485)
chr2 (163-229)||(4794572-4794638)
chr2 (57-150)||(3123538-3123630)
chr2 (105-150)||(14284393-14284438)
chr2 (108-151)||(13375593-13375636)
chr2 (109-238)||(28526910-28527038)
chr2 (163-229)||(3199897-3199963)
chr2 (163-229)||(43427128-43427194)
chr2 (108-182)||(28925937-28926010)
chr2 (163-238)||(39095630-39095705)
chr2 (108-151)||(42881396-42881439)
chr2 (57-151)||(564991-565085)
chr2 (163-229)||(1908536-1908602)
chr2 (58-148)||(5425752-5425842)
chr2 (163-229)||(7931538-7931604)
chr2 (56-126)||(10394389-10394459)
chr2 (163-229)||(13222067-13222133)
chr2 (163-229)||(19515880-19515946)
chr2 (163-229)||(24356110-24356176)
chr2 (163-229)||(37529113-37529179)
chr2 (163-228)||(6685706-6685771)
chr2 (109-150)||(44194598-44194639)
[»] chr7 (37 HSPs)
chr7 (58-238)||(7425911-7426089)
chr7 (58-242)||(33774072-33774253)
chr7 (93-234)||(38181911-38182051)
chr7 (60-238)||(46288464-46288640)
chr7 (58-239)||(2846708-2846888)
chr7 (57-238)||(11616449-11616636)
chr7 (93-238)||(31581476-31581620)
chr7 (55-241)||(33584454-33584640)
chr7 (57-201)||(12308274-12308415)
chr7 (65-238)||(29434613-29434785)
chr7 (58-239)||(29257442-29257622)
chr7 (58-151)||(48981274-48981367)
chr7 (75-238)||(23703827-23703990)
chr7 (58-238)||(30462911-30463090)
chr7 (167-228)||(1643381-1643442)
chr7 (57-188)||(34963894-34964028)
chr7 (163-229)||(37264312-37264378)
chr7 (105-238)||(5724740-5724872)
chr7 (105-187)||(40590909-40590990)
chr7 (58-239)||(44604510-44604689)
chr7 (107-150)||(46095568-46095611)
chr7 (163-229)||(25778743-25778809)
chr7 (57-229)||(32775876-32776048)
chr7 (107-150)||(36117606-36117649)
chr7 (163-238)||(37490651-37490726)
chr7 (93-182)||(39693721-39693809)
chr7 (121-151)||(8149917-8149947)
chr7 (58-128)||(26938581-26938651)
chr7 (164-238)||(27234503-27234577)
chr7 (163-201)||(27621840-27621878)
chr7 (163-229)||(30659522-30659588)
chr7 (163-229)||(38589733-38589799)
chr7 (109-150)||(28923347-28923388)
chr7 (194-239)||(49100534-49100579)
chr7 (78-143)||(49100921-49100986)
chr7 (123-151)||(29997148-29997176)
chr7 (163-239)||(48981655-48981731)
[»] chr4 (55 HSPs)
chr4 (65-238)||(18849792-18849963)
chr4 (57-238)||(33047392-33047566)
chr4 (93-241)||(54729514-54729660)
chr4 (93-238)||(8294961-8295103)
chr4 (59-239)||(42024233-42024412)
chr4 (163-231)||(1796282-1796350)
chr4 (63-150)||(1796551-1796639)
chr4 (65-232)||(31862699-31862857)
chr4 (65-238)||(39976423-39976596)
chr4 (109-238)||(39979726-39979854)
chr4 (58-239)||(41710176-41710356)
chr4 (163-229)||(25149450-25149516)
chr4 (58-238)||(48740416-48740594)
chr4 (163-242)||(32559162-32559241)
chr4 (56-143)||(43420918-43421005)
chr4 (109-238)||(3685957-3686085)
chr4 (182-238)||(43421318-43421374)
chr4 (163-239)||(49306586-49306662)
chr4 (105-234)||(49812171-49812299)
chr4 (163-229)||(29550769-29550835)
chr4 (108-238)||(41203681-41203811)
chr4 (65-239)||(42544112-42544284)
chr4 (163-231)||(17237042-17237110)
chr4 (104-151)||(8065488-8065535)
chr4 (163-238)||(22872421-22872496)
chr4 (163-242)||(26799245-26799324)
chr4 (106-242)||(40881221-40881357)
chr4 (163-229)||(10099767-10099833)
chr4 (164-222)||(16493345-16493403)
chr4 (163-237)||(38976990-38977064)
chr4 (163-229)||(42132812-42132878)
chr4 (58-151)||(28330687-28330780)
chr4 (75-148)||(29644268-29644340)
chr4 (109-146)||(29815222-29815259)
chr4 (122-229)||(37315964-37316070)
chr4 (108-148)||(28974252-28974292)
chr4 (57-238)||(41436375-41436555)
chr4 (163-231)||(51572268-51572336)
chr4 (57-149)||(51572348-51572440)
chr4 (162-229)||(8759777-8759844)
chr4 (163-238)||(27977146-27977221)
chr4 (67-150)||(34020939-34021022)
chr4 (66-239)||(42185828-42186000)
chr4 (65-151)||(283596-283682)
chr4 (85-151)||(34791071-34791137)
chr4 (163-229)||(39052943-39053009)
chr4 (163-229)||(47846898-47846964)
chr4 (109-151)||(48400749-48400791)
chr4 (121-151)||(54217300-54217330)
chr4 (109-150)||(1825368-1825409)
chr4 (56-101)||(9093902-9093947)
chr4 (205-242)||(14009663-14009700)
chr4 (107-238)||(51527363-51527492)
chr4 (194-238)||(9093795-9093839)
chr4 (163-231)||(39258312-39258380)
[»] chr6 (15 HSPs)
chr6 (58-238)||(3604633-3604812)
chr6 (57-241)||(30063979-30064161)
chr6 (65-238)||(15081325-15081497)
chr6 (108-238)||(31265725-31265853)
chr6 (48-148)||(7359128-7359228)
chr6 (58-238)||(33109268-33109447)
chr6 (76-238)||(4238335-4238495)
chr6 (118-238)||(7301113-7301232)
chr6 (163-229)||(15371905-15371971)
chr6 (163-229)||(33017986-33018052)
chr6 (163-229)||(33921511-33921577)
chr6 (163-229)||(34803749-34803815)
chr6 (163-229)||(4552908-4552974)
chr6 (163-228)||(26356268-26356333)
chr6 (108-149)||(34915923-34915964)
[»] chr3 (42 HSPs)
chr3 (58-238)||(54122257-54122434)
chr3 (110-232)||(21296542-21296663)
chr3 (57-188)||(39365100-39365230)
chr3 (163-234)||(43639553-43639624)
chr3 (105-240)||(54493851-54493984)
chr3 (65-229)||(21585452-21585615)
chr3 (58-239)||(26134735-26134915)
chr3 (163-241)||(15280604-15280682)
chr3 (57-188)||(38600889-38601018)
chr3 (109-238)||(32023134-32023262)
chr3 (58-238)||(33994553-33994731)
chr3 (163-238)||(54845549-54845624)
chr3 (105-151)||(43640684-43640730)
chr3 (65-151)||(48744127-48744213)
chr3 (98-241)||(5245347-5245489)
chr3 (163-239)||(37041905-37041981)
chr3 (163-238)||(32827337-32827412)
chr3 (65-241)||(39866583-39866759)
chr3 (109-229)||(51164898-51165017)
chr3 (163-230)||(52325176-52325243)
chr3 (163-229)||(1334823-1334889)
chr3 (163-229)||(1923089-1923155)
chr3 (57-151)||(9017694-9017787)
chr3 (163-229)||(9218144-9218210)
chr3 (164-238)||(26832071-26832145)
chr3 (93-151)||(41031502-41031560)
chr3 (163-229)||(53051025-53051091)
chr3 (122-229)||(46194248-46194354)
chr3 (58-150)||(12744708-12744800)
chr3 (65-149)||(36097777-36097861)
chr3 (163-239)||(46786013-46786089)
chr3 (108-151)||(1772231-1772274)
chr3 (57-229)||(30261543-30261715)
chr3 (163-238)||(44219066-44219141)
chr3 (164-211)||(50736101-50736148)
chr3 (164-211)||(50776707-50776754)
chr3 (163-229)||(32977832-32977898)
chr3 (163-229)||(42547148-42547214)
chr3 (163-229)||(48409583-48409649)
chr3 (105-151)||(54458429-54458475)
chr3 (167-238)||(2868577-2868648)
chr3 (108-148)||(29361286-29361326)
[»] scaffold0007 (1 HSPs)
scaffold0007 (108-229)||(230202-230321)
[»] scaffold0006 (1 HSPs)
scaffold0006 (105-238)||(229766-229897)
[»] chr1 (48 HSPs)
chr1 (98-241)||(46536275-46536417)
chr1 (63-238)||(19532953-19533127)
chr1 (66-238)||(8773141-8773316)
chr1 (163-238)||(5442339-5442414)
chr1 (98-239)||(8327652-8327792)
chr1 (65-239)||(3555588-3555760)
chr1 (56-229)||(11425912-11426084)
chr1 (98-239)||(28839275-28839414)
chr1 (108-234)||(36784259-36784384)
chr1 (57-238)||(17724748-17724928)
chr1 (98-242)||(46495953-46496096)
chr1 (105-229)||(2219491-2219613)
chr1 (75-238)||(36467229-36467390)
chr1 (109-239)||(51749216-51749345)
chr1 (105-238)||(7785308-7785439)
chr1 (85-238)||(49494197-49494348)
chr1 (109-238)||(28277072-28277200)
chr1 (98-229)||(4466197-4466327)
chr1 (93-188)||(27698742-27698836)
chr1 (92-238)||(38664330-38664475)
chr1 (163-238)||(13500763-13500838)
chr1 (122-229)||(29756185-29756293)
chr1 (109-234)||(52830452-52830575)
chr1 (164-238)||(948621-948695)
chr1 (57-229)||(2886065-2886236)
chr1 (163-229)||(12267674-12267740)
chr1 (99-238)||(17342764-17342902)
chr1 (163-229)||(19349037-19349103)
chr1 (163-229)||(29225752-29225818)
chr1 (67-229)||(24131443-24131604)
chr1 (163-238)||(10587615-10587690)
chr1 (109-229)||(16040023-16040142)
chr1 (163-238)||(26755975-26756050)
chr1 (108-151)||(43895792-43895835)
chr1 (109-151)||(7787623-7787665)
chr1 (168-238)||(27831850-27831920)
chr1 (163-225)||(35622826-35622888)
chr1 (163-229)||(36232832-36232898)
chr1 (68-149)||(37495730-37495812)
chr1 (109-151)||(49944737-49944779)
chr1 (205-238)||(42926175-42926208)
chr1 (110-151)||(48242710-48242751)
chr1 (163-228)||(52146699-52146764)
chr1 (107-151)||(6784947-6784991)
chr1 (123-151)||(14090602-14090630)
chr1 (123-151)||(30749715-30749743)
chr1 (123-151)||(30771166-30771194)
chr1 (163-231)||(52432311-52432379)
[»] scaffold0321 (1 HSPs)
scaffold0321 (101-242)||(9581-9718)
[»] scaffold0028 (1 HSPs)
scaffold0028 (163-239)||(26612-26688)
[»] scaffold0034 (1 HSPs)
scaffold0034 (66-147)||(97962-98043)
[»] scaffold0058 (1 HSPs)
scaffold0058 (163-238)||(14455-14530)
[»] scaffold0001 (1 HSPs)
scaffold0001 (163-239)||(394777-394853)
[»] scaffold0045 (1 HSPs)
scaffold0045 (163-234)||(26321-26392)


Alignment Details
Target: chr8 (Bit Score: 172; Significance: 1e-92; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 31132585 - 31132805
Alignment:
Q  19 acttgaagggattgataatcagattttaataaaacattatactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacgg 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||    
T  31132585 acttgaagggattgataatcagattttaataaaacattatactccttccgccccacaataactgatccatttgtaaaagaaaagtgttccaaaataacgg 31132684  T
Q  119 agtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttg 218  Q
    |||||||||||||||||||||||||||||||||       || ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  31132685 agtcatttcatttttcaatacaatattaattactttttttcctcttataactctaattaatactactttcacaactttcaattgattatattccattttg 31132784  T
Q  219 catttatgatagtggagaata 239  Q
    ||||||||||| |||||||||    
T  31132785 catttatgatactggagaata 31132805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 238
Target Start/End: Original strand, 5391943 - 5392123
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| ||||| ||| ||||  ||| ||||||| |||| |||||| || ||||||||| ||||||||||| ||||||||||||||||||||||          
T  5391943 tactccctccgttccataatatttgagccatttgcaaaaaaaaagtgtctcaaaataactgagtcatttcacttttcaatacaatattaattactttttt 5392042  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
     ||| ||||||||||||||||||||||||||   ||| |||||| | ||||||||| ||||||||||||||||||||||||    
T  5392043 tccctttataactctaattaatactactttcaacactcccaattcaatatattccactttgcatttatgatagtggagaat 5392123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 238
Target Start/End: Complemental strand, 32241632 - 32241457
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaa---gtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccc 161  Q
    |||||| |||||||||| |  ||||||||||| ||||   |||||| |||||||  |||| |||||| ||||||||||||||||||||||       |||    
T  32241632 tccgtctcacaataactaagtcatttgtaaaaaaaaaaaagtatcctaaaataaatgagttatttcacttttcaatacaatattaattactttttt-ccc 32241534  T
Q  162 cttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
     |||||||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||||||| |||||    
T  32241533 tttataactctaattaatattactttcacaacttccaattcattatattccactttgcatttatgatagtgaagaat 32241457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 33191074 - 33190942
Alignment:
Q  105 tcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgat 204  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||       ||| ||||||||||||||| |||||||||| |||||||||||| |     
T  33191074 tcccaaaataactgagtcatttcacttttcaatacaatattaattactttttt-ccctttataactctaattagtactactttcacaacttccaattcaa 33190976  T
Q  205 tatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||| | ||||||||||||||||||||||    
T  33190975 tatattccactatgcatttatgatagtggagaat 33190942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 238
Target Start/End: Complemental strand, 44790635 - 44790455
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||| ||||||||| ||||||||| | ||||| |||| |||||| |||||||||||   || ||||||| |||||||||||  |||||||||         
T  44790635 atactccctccgtcccataataactgagctatttgcaaaa-aaaagtgtcccaaaataattaagccatttcacttttcaatacatcattaattactattt 44790537  T
Q  157 nnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
      ||| |||||||||||||||||||||||||| | | | |||||| | ||||||||| ||| ||||||||||||||||||||    
T  44790536 ttccctttataactctaattaatactactttcaccattcccaattcaatatattccactttacatttatgatagtggagaat 44790455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 38252650 - 38252471
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| ||||||||| |||||||||  |||||| |||| |||||| |||||||||||| ||  ||||||| ||||  ||||||||||||||||          
T  38252650 tactccctccgtcccataataactgagtcatttgcaaaaaaaaagtgtcccaaaataactgaaccatttcactttttgatacaatattaattac-ttttt 38252552  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
     ||| ||||||||||||| ||||||||||||   | |||||||| | ||||||||| ||| ||||||||| ||||||||||    
T  38252551 tccctttataactctaatcaatactactttcatcatttccaattcaatatattccactttacatttatgacagtggagaat 38252471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 138928 - 139020
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    ||||||| ||||||||| ||||||||| |||||||  ||| |||| | |||||||||||| ||||||||||| |||||||||||||||||||||    
T  138928 atactccatccgtcccataataactgagccatttgcgaaaaaaaa-tgtcccaaaataaccgagtcatttcacttttcaatacaatattaatta 139020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 238
Target Start/End: Complemental strand, 32967490 - 32967310
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||| ||||||||| |||||||||  |||||| |||| |||||| |  |||||||||  |||||||||| ||||||||||| ||||| ||||         
T  32967490 atactccatccgtcccataataactgagtcatttgcaaaaaaaaagtgtttcaaaataacctagtcatttcacttttcaatacagtattagttacttttt 32967391  T
Q  157 nnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
       || ||||||||||||||||||||||||||   | |  ||||| | ||||||||| |||  |||||||||||||||||||    
T  32967390 tt-cctttataactctaattaatactactttcatcattctcaattcaatatattccactttaaatttatgatagtggagaat 32967310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 57 - 238
Target Start/End: Original strand, 2119610 - 2119790
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||| ||||| ||| |||||||||  |||||||||   |||||| |||||||||||| |||  ||||||  ||||||||||||||||||||          
T  2119610 atactccctccgttccataataactgagtcatttgtaattaaaaagtgtcccaaaataactgagctatttcacatttcaatacaatattaatta-ttatt 2119708  T
Q  157 nnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
       || |||||||||||||||||  || |||| ||||||| |||| | ||||||||| ||| ||||||||||| || |||||    
T  2119709 tttcctttataactctaattaatcttattttcacaacttctaattcagtatattccactttacatttatgataatgaagaat 2119790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 34132974 - 34133069
Alignment:
Q  56 tatactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||||| ||||||| | ||||||||| ||||||  |||| ||| || |||||||||||| |||||||| || |||| |||||||||||||||||    
T  34132974 tatactccctccgtcctaaaataactgaaccatttacaaaaaaaatgtgtcccaaaataactgagtcattacactttttaatacaatattaattac 34133069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 14689854 - 14690025
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||| ||||||||| |||||||||  |||||| |||| || | | ||||| || ||  ||  ||||||| ||||||||||||||||||||||         
T  14689854 atactccctccgtcccataataactgagtcatttgcaaaaaaatattgtcccagaaaaattgacccatttcacttttcaatacaatattaattacttttt 14689953  T
Q  157 nnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
      ||  ||||||| |||||||||||||||||| | ||| |||||| | ||||||| | |||||||||||||||    
T  14689954 t-ccaattataacactaattaatactactttcaccactcccaattcaatatattctactttgcatttatgata 14690025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 33925192 - 33925130
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttat 225  Q
    |||||||||||||||||||||||||| |||||| ||||| | ||||||||| |||||||||||    
T  33925192 ttataactctaattaatactactttcacaactttcaattcaatatattccactttgcatttat 33925130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 42412595 - 42412416
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| || |||||| |||||  || || ||||||||| || | | |||||||| ||| || |||||||| |||| ||| |||||||||||||          
T  42412595 tactccctctgtcccataataagcgagccttttgtaaaaaaatattgtcccaaaaaaactgactcatttcactttttaatgcaatattaattactttttt 42412496  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
     ||  ||||| ||||||||||||||||||||   ||| |||||| | ||||||||| ||||||||||||||| ||||||||    
T  42412495 -ccaattatagctctaattaatactactttcatcactcccaattcaatatattccactttgcatttatgataatggagaat 42412416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 2349295 - 2349424
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattat 207  Q
    |||||||||  ||||||||||  |||||||||||||||||||||       |   |||||||||||||||||| |||||||   | |||||||| | |||    
T  2349295 caaaataacttagtcatttcacgtttcaatacaatattaattaccttttttctt-ttataactctaattaatattactttcaacatttccaattcaatat 2349393  T
Q  208 attccattttgcatttatgatagtggagaat 238  Q
    |||||| ||| ||||||||||||||||||||    
T  2349394 attccaatttacatttatgatagtggagaat 2349424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 238
Target Start/End: Complemental strand, 5962651 - 5962506
Alignment:
Q  93 aaaagaaaagtatcccaaaataacggagtcattt-catttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgca 191  Q
    |||| |||||| ||| |||||||| ||||||||| || ||| ||||||| ||||||||||       ||| |||||||||||||||||| || ||||       
T  5962651 aaaaaaaaagtgtcctaaaataactgagtcattttcactttccaatacattattaattactttttc-ccctttataactctaattaatattaatttcatc 5962553  T
Q  192 acttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||| |||||| | ||||||||| ||||||||||| ||||||||||||    
T  5962552 actcccaattcaatatattccactttgcatttataatagtggagaat 5962506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 44615526 - 44615398
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattata 208  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||       ||| |||||||||||||||||| || ||||   |||  ||||| | ||||    
T  44615526 aaaataactgagtcatttcactttccaatacaatattaattac-ttttccccctttataactctaattaatattattttcatcactctcaattcaatata 44615428  T
Q  209 ttccattttgcatttatgatagtggagaat 238  Q
    ||| | ||||||||||| ||||||||||||    
T  44615427 ttctactttgcatttataatagtggagaat 44615398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 28791307 - 28791373
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| ||||| |||||| | ||||||| | ||| |||||||||||    
T  28791307 ttataactctaattaatactactttcacaactcccaattcaatatattctagtttacatttatgata 28791373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 34133072 - 34133201
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattat 207  Q
    ||||||||| |||||||| || |||||||||||||||||||||        ||  ||||||||| |||||||| |||||||   |  ||||||| | |||    
T  34133072 caaaataactgagtcattacacttttcaatacaatattaatta-ttattttccttttataactccaattaatattactttcatcatatccaattcaatat 34133170  T
Q  208 attccattttgcatttatgatagtggagaat 238  Q
    ||| |||||| ||||||||||||||||||||    
T  34133171 atttcattttacatttatgatagtggagaat 34133201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 229
Target Start/End: Original strand, 2796932 - 2797105
Alignment:
Q  56 tatactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnn 155  Q
    |||||||| ||||||||| ||||| ||| ||||||| |||| || | | | | |||| |   || |||||||| |||||||||||||||||||||         
T  2796932 tatactccctccgtcccataataagtgagccatttgcaaaaaaatattgttcaaaaaaacttgactcatttcacttttcaatacaatattaattattttt 2797031  T
Q  156 nnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
       ||  |||||||||||||||||| |||||||   ||| |||||| | ||||||| | |||||||||||||||    
T  2797032 ttaccaattataactctaattaatattactttcattactcccaattcaatatattctactttgcatttatgata 2797105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 238
Target Start/End: Original strand, 21587178 - 21587351
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnncccctt 164  Q
    |||||| || |||||||||  |||||  ||||  ||||| |||||||||| | ||| ||||||| |||||||| |||||||||||||       | | ||    
T  21587178 tccgtctcataataactgagtcattttcaaaaacaaagtgtcccaaaatatctgagccatttcacttttcaatgcaatattaattactttttttctcttt 21587277  T
Q  165 ataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||| || || ||||||||||||   ||| |||||| | ||||||||| ||||||||| | | ||||||||||    
T  21587278 ataacgctgatcaatactactttcatcactcccaattcaatatattccactttgcatttctaacagtggagaat 21587351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 28802766 - 28802842
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    |||||||||||||||||| || ||||   |||  ||||| | ||||||||| |||||||||||||||||||||||||    
T  28802766 ttataactctaattaataatattttcatcactctcaattcaatatattccactttgcatttatgatagtggagaata 28802842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 234
Target Start/End: Original strand, 29615728 - 29615868
Alignment:
Q  93 aaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaa 192  Q
    |||| |||||| | |||||||||| || |||||| | |||||||||||||||||||||        ||| |||||||| |||||||||||||||||   |    
T  29615728 aaaaaaaaagtgttccaaaataactgaatcattttacttttcaatacaatattaatta-tttttttccctttataactttaattaatactactttcatca 29615826  T
Q  193 cttccaattgattatattccattttgcatttatgatagtgga 234  Q
     | |||||| | ||||||||| ||| ||||||||| ||||||    
T  29615827 ttcccaattcaatatattccactttacatttatgacagtgga 29615868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 231
Target Start/End: Original strand, 39171485 - 39171610
Alignment:
Q  105 tcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgat 204  Q
    |||||||||||| ||||||||| | ||||||||| ||||||||||||       |   ||||||||||||||||||||| ||||   |||  ||||| |     
T  39171485 tcccaaaataactgagtcatttaacttttcaatataatattaattactttttt-ctttttataactctaattaatactattttcatcactcacaattcaa 39171583  T
Q  205 tatattccattttgcatttatgatagt 231  Q
    ||||||||| |||||||||||||||||    
T  39171584 tatattccactttgcatttatgatagt 39171610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 42558685 - 42558613
Alignment:
Q  167 aactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    ||||||||||||||||||||||   |||   |||| | ||||||||| |||||||||||||||||||||||||    
T  42558685 aactctaattaatactactttcatcactcttaattcaatatattccactttgcatttatgatagtggagaata 42558613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 2195467 - 2195533
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||||||||||||||||||||||   ||| |||||| | ||||||| | |||||||||||||||    
T  2195467 ttataactctaattaatactactttcatcactcccaattcaatatattctactttgcatttatgata 2195533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 7258475 - 7258409
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||||||||||||||||||||||   ||| |||||| | ||||||| | |||||||||||||||    
T  7258475 ttataactctaattaatactactttcatcactcccaattcaatatattctagtttgcatttatgata 7258409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 14117461 - 14117527
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||| ||||||| |||||| ||||| | ||||||| | ||| |||||||||||    
T  14117461 ttataactctaattaatattactttcacaactttcaattcaatatattcaactttacatttatgata 14117527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 27987657 - 27987735
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaataca 241  Q
    |||||||| |||||||||||||||||   |||  ||||| | |||||| |||||||||||||||||| |||| ||||||    
T  27987657 ttataactataattaatactactttcatcactcacaattcaatatatttcattttgcatttatgataatggaaaataca 27987735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 28044959 - 28045037
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaataca 241  Q
    |||||||| |||||||||||||||||   |||  ||||| | |||||| |||||||||||||||||| |||| ||||||    
T  28044959 ttataactataattaatactactttcatcactcacaattcaatatatttcattttgcatttatgataatggaaaataca 28045037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 232
Target Start/End: Complemental strand, 31410769 - 31410647
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattata 208  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||       |  | ||||||| |||||||||||||||||   |||   |||| | ||||    
T  31410769 aaaataactgagtcatttcactttccaatacaatattaattactttttcccttc-tataactttaattaatactactttcattactcttaattcaatata 31410671  T
Q  209 ttccattttgcatttatgatagtg 232  Q
    ||||| ||||||||||||||||||    
T  31410670 ttccactttgcatttatgatagtg 31410647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 29731029 - 29730988
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    |||||||| ||||||||||| |||||||||||||||||||||    
T  29731029 aaaataactgagtcatttcacttttcaatacaatattaatta 29730988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 4274407 - 4274331
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    |||||||||||||||||| || |||| | |||  ||||| | |||||| || |||||||||||||||| ||||||||    
T  4274407 ttataactctaattaatattattttcaccactctcaattcaatatatttcactttgcatttatgataggggagaata 4274331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 4480596 - 4480564
Alignment:
Q  118 gagtcatttcatttttcaatacaatattaatta 150  Q
    |||||||||||||||||||||||||||||||||    
T  4480596 gagtcatttcatttttcaatacaatattaatta 4480564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 229
Target Start/End: Complemental strand, 10729027 - 10728964
Alignment:
Q  166 taactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||||||||||||||||||    ||| |||||| | ||||||||| |||||||||||||||    
T  10729027 taactctaattaatactactttaatcactcccaattcaatatattccactttgcatttatgata 10728964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 148
Target Start/End: Complemental strand, 34287284 - 34287201
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaat 148  Q
    ||||||||| ||||| ||| ||||||   ||| ||| || | |||||||||| ||||||||||| |||||||||||| ||||||    
T  34287284 tccgtcccataataattgaaccatttacgaaaaaaatgtgttccaaaataactgagtcatttcacttttcaatacaacattaat 34287201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 41726479 - 41726586
Alignment:
Q  121 tcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgca 220  Q
    |||||||| ||||||||||||||||||||||       |   |||||||| |||||||||||| |||| ||||| |||||| | ||||||| | ||| ||    
T  41726479 tcatttcacttttcaatacaatattaattactttttttcaa-ttataactgtaattaatactaatttcacaactcccaattcaatatattctactttaca 41726577  T
Q  221 tttatgata 229  Q
    |||||||||    
T  41726578 tttatgata 41726586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 26570320 - 26570278
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||||| || |||||||| ||||||||||||||||||||||    
T  26570320 aaaataactgattcatttcacttttcaatacaatattaattac 26570278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 139027 - 139088
Alignment:
Q  169 ctctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatag 230  Q
    ||||||||||||||| ||||   |||  ||||| ||||||||||| ||||||||||||||||    
T  139027 ctctaattaatactaatttcattactcacaattcattatattccactttgcatttatgatag 139088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 238
Target Start/End: Original strand, 9014745 - 9014777
Alignment:
Q  206 atattccattttgcatttatgatagtggagaat 238  Q
    |||||||| ||||||||||||||||||||||||    
T  9014745 atattccactttgcatttatgatagtggagaat 9014777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 22325107 - 22325075
Alignment:
Q  118 gagtcatttcatttttcaatacaatattaatta 150  Q
    ||||||||||| |||||||||||||||||||||    
T  22325107 gagtcatttcacttttcaatacaatattaatta 22325075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 1e-55; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 241
Target Start/End: Complemental strand, 42575851 - 42575669
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| ||||||| ||||||||||||||||||||||          
T  42575851 tactccctccgtcccacaataactgagccatttgtaaaagaaaagtgtcccaaaataaccgagccatttcacttttcaatacaatattaattac-ttttt 42575753  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaataca 241  Q
     ||| |||||||| ||||||||||||||||| |||||||||||| | ||||||||| |||||||||||||||||||||||||||    
T  42575752 tccctttataactttaattaatactactttcacaacttccaattcaatatattccactttgcatttatgatagtggagaataca 42575669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 55 - 238
Target Start/End: Complemental strand, 8369913 - 8369730
Alignment:
Q  55 ttatactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnn 154  Q
    ||||||||| |||||||||||||| |||| ||||||| |||  |||||| |||||||||||| ||| |||||||||||||||||||||||||||||        
T  8369913 ttatactccctccgtcccacaatagctgagccatttgcaaataaaaagtgtcccaaaataactgagccatttcatttttcaatacaatattaattatttt 8369814  T
Q  155 nnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
         |  |||||||||||||||||||||||||| |||||| ||||| | ||||||||| ||||||||||||||||||||||||    
T  8369813 tttttcttttataactctaattaatactactttcacaactttcaattcaatatattccactttgcatttatgatagtggagaat 8369730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 107 - 238
Target Start/End: Complemental strand, 8692982 - 8692852
Alignment:
Q  107 ccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgatta 206  Q
    |||||||||| ||||||||||||||||||||||||||||||||||       ||  |||||||||||||||||| ||||||| |||||||||||| | ||    
T  8692982 ccaaaataaccgagtcatttcatttttcaatacaatattaattactttttttcct-ttataactctaattaatattactttcacaacttccaatttaata 8692884  T
Q  207 tattccattttgcatttatgatagtggagaat 238  Q
    |||| |||||||||||||||||||||||||||    
T  8692883 tatttcattttgcatttatgatagtggagaat 8692852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 56 - 238
Target Start/End: Complemental strand, 35646305 - 35646123
Alignment:
Q  56 tatactccttccgtcccacaataactgatccatttgtaaaagaaaa-gtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnn 154  Q
    |||||||| ||| ||||| ||||||||| | ||||| |||| |||| || || ||| ||||| ||||||||||| |||||||||| |||||||||||       
T  35646305 tatactccctccatcccataataactgagctatttgcaaaaaaaaaagtgtctcaatataactgagtcatttcacttttcaatacgatattaattacttt 35646206  T
Q  155 nnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
        ||  |||||||||||||||||||||||||| ||||||| |||| | ||||||||| ||||||||||||||||||||||||    
T  35646205 ttt-ccttttataactctaattaatactactttcacaacttctaattcaatatattccactttgcatttatgatagtggagaat 35646123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 22583085 - 22582906
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaa-gtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    |||||| ||||||||||||||||| |  |||||| |||| |||| || |||  ||||||| |||| |||||| |||||||||||||||||||||          
T  22583085 tactccctccgtcccacaataactaagtcatttgcaaaaaaaaatgtgtccttaaataactgagttatttcaattttcaatacaatattaattatttttt 22582986  T
Q  157 nnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
       |  |||||||||||||||||||||||||| |||||||||||| | ||| ||||| ||||||||||||||||||||||||    
T  22582985 tttct-ttataactctaattaatactactttcacaacttccaattcaatat-ttccactttgcatttatgatagtggagaat 22582906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 11099643 - 11099511
Alignment:
Q  105 tcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgat 204  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||||       ||| ||||||||||||||||||||||||||   ||| |||||| |     
T  11099643 tcccaaaataactgagtcatttcactttccaatacaatattaattactttttc-ccctttataactctaattaatactactttcatcactcccaattcaa 11099545  T
Q  205 tatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||| |||| |||||||||||||||||||    
T  11099544 tatattccactttgtatttatgatagtggagaat 11099511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 238
Target Start/End: Original strand, 3725081 - 3725260
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||| ||||||||| |||||||||  |||||| || | |||||| ||| |||||||| ||||||||||| ||||||||||||||||||||           
T  3725081 atactccctccgtcccataataactgaatcatttgcaataaaaaagtgtcctaaaataactgagtcatttcacttttcaatacaatattaatt--ttttt 3725178  T
Q  157 nnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
      ||| |||||||||||||||||| |||||||   |||  |||||   ||||||||| | ||||||||||||||||||||||    
T  3725179 ttccctttataactctaattaatattactttcatcactcacaattcgatatattccactatgcatttatgatagtggagaat 3725260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 58 - 231
Target Start/End: Original strand, 39008025 - 39008195
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| |||||||||||||||||||   ||||| |||| |||| | ||| ||||||||  |||||||||| |||||||||||||||||||||           
T  39008025 tactccctccgtcccacaataactgagttatttgcaaaaaaaaa-tgtcctaaaataactaagtcatttcacttttcaatacaatattaatta-tttttt 39008122  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagt 231  Q
     ||| ||||||||||||||||||||||||||  ||||||||||| | |||||| || ||| |||||||||||||    
T  39008123 tccctttataactctaattaatactactttc-aaacttccaattcaatatatttcactttacatttatgatagt 39008195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 858281 - 858409
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattata 208  Q
    |||||||| |||||||||||  |||||||||||||||||||||       ||  ||||||||||||||||||||||||||   |||  ||||| | ||||    
T  858281 aaaataaccgagtcatttcacatttcaatacaatattaattacttttttacct-ttataactctaattaatactactttcatcactctcaattaaatata 858379  T
Q  209 ttccattttgcatttatgatagtggagaat 238  Q
    || |||||||||||||||||| ||||||||    
T  858380 tttcattttgcatttatgataatggagaat 858409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 35334635 - 35334559
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    ||||||||||||||||||||||||||   ||| |||||| | ||||||||| |||||||||||||||||||||||||    
T  35334635 ttataactctaattaatactactttcatcactcccaattcaatatattccactttgcatttatgatagtggagaata 35334559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 56 - 229
Target Start/End: Complemental strand, 5358032 - 5357860
Alignment:
Q  56 tatactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnn 155  Q
    |||||||| ||||||||| |||||||||  ||||| ||| | |||||| |||||||||||| | ||||||||| ||| ||||||| ||||||||||        
T  5358032 tatactccgtccgtcccataataactgagacatttttaataaaaaagtgtcccaaaataactgtgtcatttcactttccaatacagtattaattac-ttt 5357934  T
Q  156 nnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
       |   |||||||||||||||||| ||||||| | |||||||||  | ||||||| | ||| |||||||||||    
T  5357933 tttcaaattataactctaattaatattactttcaccacttccaatacaatatattctactttacatttatgata 5357860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 41686693 - 41686614
Alignment:
Q  69 tcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaat 148  Q
    ||||| ||||||||| ||||||||||||  ||||| |||||||||||| ||||||||||| ||||||||||||| |||||    
T  41686693 tcccataataactgagccatttgtaaaaataaagtgtcccaaaataactgagtcatttcacttttcaatacaattttaat 41686614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 238
Target Start/End: Original strand, 6610730 - 6610911
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac-nnnnn 156  Q
    |||||| ||||||||| |||||||||  |||||  |||| ||||   |||||||||||| ||||||||||| |||| |||||||||||||||||          
T  6610730 tactccctccgtcccataataactgagtcattttcaaaaaaaaaaagtcccaaaataactgagtcatttcacttttaaatacaatattaattactttttt 6610829  T
Q  157 nnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
      | | |||||||| ||||||||| |||||||   ||| | |||| | |||||| || ||| ||||||||||||||||||||    
T  6610830 ttctctttataactttaattaatattactttcatcactccgaattcaatatatttcactttacatttatgatagtggagaat 6610911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 17243126 - 17242987
Alignment:
Q  98 aaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttcc 197  Q
    |||||||||| |||||||  |||| |||||| |||| ||||||  |||||||||       ||| ||||||||||||||||||||||||||   |||  |    
T  17243126 aaaagtatcctaaaataagtgagttatttcactttttaatacatcattaattacttttt--ccctttataactctaattaatactactttcatcactctc 17243029  T
Q  198 aattgattatattccattttgcatttatgatagtggagaata 239  Q
    |||| | ||||||||| ||||||||||||||||| |||||||    
T  17243028 aattcaatatattccactttgcatttatgatagtagagaata 17242987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 6735465 - 6735391
Alignment:
Q  164 tataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||||| |||||||   ||||| |||| | ||||||||| ||||||||||||||||||||||||    
T  6735465 tataactctaattaatattactttcatcacttcaaatttaatatattccactttgcatttatgatagtggagaat 6735391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 242
Target Start/End: Original strand, 42211276 - 42211411
Alignment:
Q  107 ccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgatta 206  Q
    |||||||||| ||||||||||| |||| |||||||| ||| ||||        || ||||||||| ||||||||||||||||   |||  ||||| | ||    
T  42211276 ccaaaataactgagtcatttcacttttgaatacaatcttatttactttgttttcctttataactcaaattaatactactttcatcactcacaattcaata 42211375  T
Q  207 tattccattttgcatttatgatagtggagaatacat 242  Q
    |||| || |||||||||||||||||||| |||||||    
T  42211376 tatttcactttgcatttatgatagtggaaaatacat 42211411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 13135699 - 13135827
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattata 208  Q
    |||||||  ||||||||||| |||||||||||||||||| ||        ||| |||||||| |||||| ||||||||||   ||| | |||| | ||||    
T  13135699 aaaataatcgagtcatttcacttttcaatacaatattaaata-tttttttccctttataactttaattactactactttcatcactcctaattcaatata 13135797  T
Q  209 ttccattttgcatttatgatagtggagaat 238  Q
    ||||| ||||||||||||||||||||||||    
T  13135798 ttccactttgcatttatgatagtggagaat 13135827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 238
Target Start/End: Complemental strand, 39183776 - 39183661
Alignment:
Q  121 tcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgca 220  Q
    |||||| ||||||||||||||||||||||||        |  |||||||||||||||||| |||||||   |||  ||||| | ||||||||| ||||||    
T  39183776 tcattttatttttcaatacaatattaattactttttt--caattataactctaattaatattactttcatcactctcaattcaatatattccactttgca 39183679  T
Q  221 tttatgatagtggagaat 238  Q
    ||||||||||||||||||    
T  39183678 tttatgatagtggagaat 39183661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 151
Target Start/End: Complemental strand, 4044690 - 4044596
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaag-tatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||| ||||||||| |||||||||  |||||| |||| ||||  | |||||||||||  || |||||||| ||||||||||||||||||||||    
T  4044690 tactccctccgtcccataataactgagtcatttgcaaaataaaaaatgtcccaaaataattgaatcatttcacttttcaatacaatattaattac 4044596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 16926295 - 16926209
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||||| |||||||||||||||||||||| || | | ||| |||| ||  ||  ||||||||||| ||||||||||||||||||    
T  16926295 tccgtcccataataactgatccatttgtaaaaaaatattgtcctaaaaaaattgacccatttcattttccaatacaatattaattac 16926209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 33012256 - 33012342
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||||| |||||| ||  |||||| ||||  |||||||||||||||| | ||| ||||||| |||||||| |||||||||||||    
T  33012256 tccgtcccataataaccgagtcatttgcaaaaacaaagtatcccaaaatatctgagccatttcacttttcaatgcaatattaattac 33012342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 33988199 - 33988277
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaataca 241  Q
    |||||||||||||| ||| |||||||   ||| |||||| | ||||||||| ||| |||||||||||||||||||||||    
T  33988199 ttataactctaattcatattactttcattactcccaattcaatatattccactttacatttatgatagtggagaataca 33988277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 13716900 - 13716998
Alignment:
Q  56 tatactccttccgtcccacaataactgatccatttgta---aaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||||| ||||||||| |||||| ||  |||||| |   ||| ||||  ||| ||||||||| ||||||||| ||||||||||||||||||||||||    
T  13716900 tatactccctccgtcccataataacggagtcatttgaagaaaaaaaaaaaaatctcaaaataactgagtcattttatttttcaatacaatattaattac 13716998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 32539661 - 32539736
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||||||||| ||||   |||||| ||| | ||||||  ||||| ||||||||||||||||||||    
T  32539661 ttataactctaattaatactattttcatcacttccgatttaatatattttattttacatttatgatagtggagaat 32539736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 7276286 - 7276371
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||||| ||||||||| ||||||| |||| ||||   ||| |||||||| |||| |||| | ||||||||||||||||||||||    
T  7276286 tccgtcccaaaataactgagccatttgcaaaaaaaaaag-tcctaaaataactgagttattttacttttcaatacaatattaattac 7276371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 150
Target Start/End: Original strand, 15814608 - 15814650
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  15814608 caaaataactgagtcatttcacttttcaatacaatattaatta 15814650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 234
Target Start/End: Original strand, 25814254 - 25814434
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaa----gtatcccaaaataacggagtcatttcatttttcaatacaatattaattacn 152  Q
    ||||||| ||||||||| |||||||||  |||||| |||| ||||    || | | |||||||| || |||||||| ||||||||||||||||||||||     
T  25814254 atactccatccgtcccataataactgagacatttgcaaaaaaaaaaaaagtgttctaaaataactgaatcatttcacttttcaatacaatattaattac- 25814352  T
Q  153 nnnnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtgga 234  Q
          ||  |||||||| ||||||||| |||| ||   | |||||||| | |||||| || ||| ||||||||||||||||    
T  25814353 ttttttccttttataactttaattaatattactctcatcatttccaattcaatatatttcactttacatttatgatagtgga 25814434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 188
Target Start/End: Original strand, 4412329 - 4412407
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttc 188  Q
    ||||||||  |||||||||| ||||||||||||||||||||||       ||| ||||||||||||||||||||| ||||    
T  4412329 aaaataactaagtcatttcacttttcaatacaatattaattac-ttttttccctttataactctaattaatactattttc 4412407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Complemental strand, 30437914 - 30437861
Alignment:
Q  98 aaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||||| ||||| ||| ||||||||||| |||| |||||||||||||||||    
T  30437914 aaaagtatctcaaaacaactgagtcatttcacttttaaatacaatattaattac 30437861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 13422548 - 13422472
Alignment:
Q  75 aataactgatccatttgtaaaagaaa-agtatcccaaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    |||||||||||| ||||||||| ||| | | ||  |||||||| || |||||||| |||||||||||||||||||||    
T  13422548 aataactgatccttttgtaaaaaaaatattgtcataaaataactgattcatttcacttttcaatacaatattaatta 13422472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 238
Target Start/End: Complemental strand, 36446789 - 36446721
Alignment:
Q  170 tctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||||||||||||||||   |||| ||||| | ||||||  | ||||||||||||||||||||||||    
T  36446789 tctaattaatactactttcatcactttcaattcaatatattatactttgcatttatgatagtggagaat 36446721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 38978905 - 38978969
Alignment:
Q  165 ataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||||||||||||||||| || |||||  ||||| | ||||||| | |||||||||||||||    
T  38978905 ataactctaattaatactactatcacaactctcaatttaatatattctactttgcatttatgata 38978969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 14259612 - 14259655
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||||| || |||||||||||||||||| ||||||||||||    
T  14259612 caaaataactgattcatttcatttttcaatataatattaattac 14259655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 15254764 - 15254839
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||||||||||||||| |||||||   |||| ||||| | ||||||| | |||||||| ||||||| |||||||    
T  15254764 ttataactctaattaatattactttcatcactttcaattcaatatattctaatttgcattaatgatagcggagaat 15254839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 16283696 - 16283621
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||||||||||| || ||||||||   |||  ||||| | ||||||||| ||||||||||||||||| ||||||    
T  16283696 ttataactctaattgatgctactttcatcactctcaattcaatatattccactttgcatttatgatagttgagaat 16283621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 36469203 - 36469128
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||| |||||||||||||||||||   ||||  |||| | ||||||  | ||||||||||||||||||||||||    
T  36469203 ttataattctaattaatactactttcatcacttttaattcaatatattatactttgcatttatgatagtggagaat 36469128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 229
Target Start/End: Original strand, 7871272 - 7871378
Alignment:
Q  122 catttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcat 221  Q
    ||||||||||||||||||||||||||||||        |  ||||||  |||||||||||||||||| | || ||||||| | ||||||| | ||| |||    
T  7871272 catttcatttttcaatacaatattaattacttttttttcaattataatactaattaatactactttcaccac-tccaatttaatatattctactttacat 7871370  T
Q  222 ttatgata 229  Q
    ||||||||    
T  7871371 ttatgata 7871378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 19817119 - 19817169
Alignment:
Q  66 ccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataac 116  Q
    |||||||| ||||||||| |||||||||||| |||| | ||||||||||||    
T  19817119 ccgtcccaaaataactgagccatttgtaaaaaaaaattgtcccaaaataac 19817169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 19889642 - 19889576
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||| ||||||| | |||| ||||| | ||||||| | ||| |||||||||||    
T  19889642 ttataactctaattaatattactttcaccactttcaattcaatatattctactttacatttatgata 19889576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 25111257 - 25111191
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||| | ||||||||||||||||| | |||||||||| | ||||||| | ||| |||||||||||    
T  25111257 ttataattttaattaatactactttcaccacttccaattcaatatattctactttacatttatgata 25111191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 25170348 - 25170282
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||| | ||||||||||||||||| | |||||||||| | ||||||| | ||| |||||||||||    
T  25170348 ttataattttaattaatactactttcaccacttccaattcaatatattctactttacatttatgata 25170282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 36007001 - 36006935
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||| || |||| | |||||||||| | ||||||| | ||| |||||||||||    
T  36007001 ttataactctaattaatattattttcaccacttccaattcagtatattctactttacatttatgata 36006935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 39212660 - 39212594
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||||||||||||||||||||||    || |||||| | ||||||| | |||||||||||||||    
T  39212660 ttataactctaattaatactactttcatcgctcccaattcaatatattctactttgcatttatgata 39212594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 41184047 - 41184105
Alignment:
Q  93 aaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||| |||||| | |||||||||| |||| |||| | ||||||||||||||||||||||    
T  41184047 aaaaaaaaagtgttccaaaataactgagtgattttacttttcaatacaatattaattac 41184105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 43525477 - 43525543
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| | |||||||||| |  |||||  | ||| |||||||||||    
T  43525477 ttataactctaattaatactactttcaccacttccaattcaacatattatactttacatttatgata 43525543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 151
Target Start/End: Original strand, 20369199 - 20369263
Alignment:
Q  86 catttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||||||| || ||| |||||||| ||  || |||||||| ||||||||||||||||||||||    
T  20369199 catttgtaaaa-aatagtgtcccaaaaaaattgactcatttcacttttcaatacaatattaattac 20369263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 36446827 - 36446798
Alignment:
Q  121 tcatttcatttttcaatacaatattaatta 150  Q
    ||||||||||||||||||||||||||||||    
T  36446827 tcatttcatttttcaatacaatattaatta 36446798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 150
Target Start/End: Complemental strand, 36469248 - 36469219
Alignment:
Q  121 tcatttcatttttcaatacaatattaatta 150  Q
    ||||||||||||||||||||||||||||||    
T  36469248 tcatttcatttttcaatacaatattaatta 36469219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 43525371 - 43525407
Alignment:
Q  54 attatactccttccgtcccacaataactgatccattt 90  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  43525371 attatactccctccgtcccataataactgatccattt 43525407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 54 - 238
Target Start/End: Original strand, 3100290 - 3100474
Alignment:
Q  54 attatactccttccgtcccacaataactgatccatttgtaaaagaaaa-gtatcccaaaataacggagtcatttcatttttcaatacaatattaattacn 152  Q
    |||||||||| ||||||||||||||||||| ||||||| |||| |||| || || ||||||||| ||||||||||| ||||||||||||||||||||||     
T  3100290 attatactccctccgtcccacaataactgagccatttgcaaaaaaaaaagtgtctcaaaataactgagtcatttcacttttcaatacaatattaattac- 3100388  T
Q  153 nnnnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
          ||| || ||||||||||||||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  3100389 ttttttccctttgtaactctaattaatactactttcacaacttccaatttaatatattccactttgcatttatgatagtggagaat 3100474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 56 - 238
Target Start/End: Original strand, 28572104 - 28572282
Alignment:
Q  56 tatactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnn 155  Q
    |||||||| |||||||||||||||||||  |||||| |||  |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||        
T  28572104 tatactccctccgtcccacaataactgagacatttgcaaataaaaagtgtcccaaaataactgagtcatttcacttttcaatacaatattaattac---- 28572199  T
Q  156 nnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
       | | |||||||| ||||||||||||||||| |||||||||||| | |||||| |||||||||||||||||||||||||||    
T  28572200 tttctctttataactgtaattaatactactttcacaacttccaattcaatatatttcattttgcatttatgatagtggagaat 28572282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 54 - 238
Target Start/End: Complemental strand, 44534702 - 44534516
Alignment:
Q  54 attatactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnn 153  Q
    |||||||||| |||||||||||||||||||  |||||  |||| |||| | || ||||||||| ||||||||||| ||||||||||||||||||||||      
T  44534702 attatactccatccgtcccacaataactgagtcatttacaaaaaaaaa-tgtctcaaaataactgagtcatttcacttttcaatacaatattaattactt 44534604  T
Q  154 nnnnnc---cccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
             |  ||||||||||||||||||||| |||| || ||||||||| | ||||||||| ||||||||||||||||||||||||    
T  44534603 tttctttttcttttataactctaattaatactaatttcacagcttccaattcaatatattccactttgcatttatgatagtggagaat 44534516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 231
Target Start/End: Complemental strand, 5212174 - 5211998
Alignment:
Q  52 acattatactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||||||| | |||||||||||||||  || ||||||| |||| ||||||  || |||||||| |||| |||||| ||||||||||||||||||||||    
T  5212174 acattatacttcctccgtcccacaataatcgagccatttgcaaaaaaaaagt--cctaaaataactgagttatttcacttttcaatacaatattaattac 5212077  T
Q  152 nnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagt 231  Q
            || |||||| | ||||||||||||||||| |||||| ||||| | ||||||||| |||||||||||||||||    
T  5212076 ttttttt-cctttataaatttaattaatactactttcacaactttcaattcaatatattccactttgcatttatgatagt 5211998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 41436024 - 41436157
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattat 207  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||       ||  ||||||||||||||||||||||||||   | |  ||||| | |||    
T  41436024 caaaataactgagtcatttcacttttcaatacaatattaattac-tttttcccttttataactctaattaatactactttcatcattctcaattcaatat 41436122  T
Q  208 attccattttgcatttatgatagtggagaatacat 242  Q
    |||||| |||||||||||||||||| |||||||||    
T  41436123 attccactttgcatttatgatagtgaagaatacat 41436157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 58 - 225
Target Start/End: Original strand, 7213370 - 7213536
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| ||||||||| ||||| |||  |||||| |||| | |||| |||||||||||   | |||||||| ||||||||||||||||||||||          
T  7213370 tactccctccgtcccataataagtgagtcatttgcaaaaaataagtgtcccaaaataattaaatcatttcacttttcaatacaatattaattac-ttttt 7213468  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttat 225  Q
     ||  |||||||||||||||||||||||||| |||||  ||||| | ||||||||| ||| |||||||    
T  7213469 cccttttataactctaattaatactactttcacaactctcaattcaatatattccactttacatttat 7213536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 43077941 - 43077845
Alignment:
Q  56 tatactccttccgtcccacaataactgatccatttgtaaaagaaaa--gtatcccaaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    |||||| | ||||||||| || |||||| ||||||| |||| ||||  || |||||||||||||||||||||||| |||||||||||||||||||||    
T  43077941 tatactacatccgtcccataacaactgagccatttgcaaaaaaaaaaagtgtcccaaaataacggagtcatttcacttttcaatacaatattaatta 43077845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 58 - 234
Target Start/End: Complemental strand, 30757779 - 30757605
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| ||||||||| ||||||||| ||||||| ||||||||||| ||| ||||| |  ||| |||  || ||||||||||||||||||||||          
T  30757779 tactccctccgtcccataataactgagccatttgcaaaagaaaagtgtccaaaaattaatgagccata-cacttttcaatacaatattaattactttttt 30757681  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtgga 234  Q
     |   ||||||||||||||||||||||||||   | | |||||| | ||||||||| ||| ||||||||||||||||    
T  30757680 tctt-ttataactctaattaatactactttcatcattcccaattcaatatattccaatttacatttatgatagtgga 30757605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 18181426 - 18181246
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| ||||||||| ||||||||| |  |||||| || || | | ||| |||||||| ||  ||||||| |||||||||||||||||||||           
T  18181426 tactccctccgtcccataataactgagctttttgtagaaaaatattgtcctaaaataactgacccatttcacttttcaatacaatattaattattttttt 18181327  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
     |   ||||||||||||||||||||||||||   | | |||||| |  |||||| | ||||||||||||||||||||||||    
T  18181326 tctaattataactctaattaatactactttcattattcccaattcaaaatattctactttgcatttatgatagtggagaat 18181246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 150
Target Start/End: Original strand, 24451684 - 24451770
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaa-aagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    ||||||||| ||||||||| ||||||  || || |||||||||||||||||||  |||||||||| ||| |||||||||||||||||    
T  24451684 tccgtcccataataactgagccattttcaataaaaaaagtatcccaaaataactaagtcatttcactttccaatacaatattaatta 24451770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 238
Target Start/End: Complemental strand, 28108539 - 28108408
Alignment:
Q  107 ccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgatta 206  Q
    |||||||||| ||| |||| || |||||||||||| |||||||||       ||| ||||||||||||||||||||||||||   | |  ||||| | ||    
T  28108539 ccaaaataactgagccattccacttttcaatacaacattaattactttttttccctttataactctaattaatactactttcatcattctcaattcaata 28108440  T
Q  207 tattccattttgcatttatgatagtggagaat 238  Q
    ||||||| ||| ||| ||||||||||||||||    
T  28108439 tattccactttacatgtatgatagtggagaat 28108408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 15859494 - 15859388
Alignment:
Q  118 gagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccatttt 217  Q
    ||||||||||| ||||||||||||||||||||||       ||| |||||||||||||||| | ||||||| ||||||| |||| | |||||| || |||    
T  15859494 gagtcatttcacttttcaatacaatattaattactttttt-ccctttataactctaattaacattactttcacaacttctaattcaatatatttcacttt 15859396  T
Q  218 gcatttat 225  Q
    ||||||||    
T  15859395 gcatttat 15859388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 40964947 - 40965076
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||| || |||||| |||||||||  |||||| |||| | || | |||||||||||| |||| |||| ||||||||||||||||||||||||         
T  40964947 atactccctcagtcccataataactgagtcatttgcaaaaaagaaatgtcccaaaataactgagttattt-atttttcaatacaatattaattac-tttt 40965044  T
Q  157 nnccccttataactctaattaatactactttc 188  Q
      ||| |||||||||||||||||| |||||||    
T  40965045 ttccctttataactctaattaatattactttc 40965076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 28301433 - 28301509
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    ||||||||||||||||||||||||||   |||  ||||| | |||||| || |||||||||||||||||||||||||    
T  28301433 ttataactctaattaatactactttcatcactctcaattcaatatatttcactttgcatttatgatagtggagaata 28301509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 7650136 - 7650008
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattata 208  Q
    |||||||| || |||||||| |||| |||||||||||||||||       ||  |||||||||||||||||||||  |||   | || ||||| | ||||    
T  7650136 aaaataactgaatcatttcacttttaaatacaatattaattactttttt-ccttttataactctaattaatactatcttcatcattttcaattcaatata 7650038  T
Q  209 ttccattttgcatttatgatagtggagaat 238  Q
    ||||| ||||||||||||||||||||||||    
T  7650037 ttccactttgcatttatgatagtggagaat 7650008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 98 - 238
Target Start/End: Original strand, 10818555 - 10818695
Alignment:
Q  98 aaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttcc 197  Q
    |||||| || ||||||||| |||||||||||||||| |||| ||||||||||||       ||| ||||||||||||||||||  ||||||   ||| |     
T  10818555 aaaagtgtctcaaaataactgagtcatttcattttttaatataatattaattactttttttccctttataactctaattaatatcactttcatcactcct 10818654  T
Q  198 aattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||| | || ||| || ||||||||||||||| | ||||||    
T  10818655 aattcaatacatttcactttgcatttatgatactagagaat 10818695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 23684958 - 23685033
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||||||||||||||   |||  ||||| | |||||| || ||||||||||||||||||||||||    
T  23684958 ttataactctaattaatactactttcatcactctcaattcaatatatttcactttgcatttatgatagtggagaat 23685033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 55 - 188
Target Start/End: Original strand, 33751353 - 33751485
Alignment:
Q  55 ttatactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnn 154  Q
    ||||||||| |||||| || | ||||||| ||||||  || | |||||| ||| |||||||  ||||||||||| |||||||||||  |||||||||       
T  33751353 ttatactccctccgtctcatactaactgaaccattttcaataaaaaagtgtccaaaaataaatgagtcatttcacttttcaatacatcattaattac-tt 33751451  T
Q  155 nnnnccccttataactctaattaatactactttc 188  Q
        ||| ||||||||||||||||||||||||||    
T  33751452 ttttccctttataactctaattaatactactttc 33751485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 4794572 - 4794638
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||||||||||||||||||||||   |||| ||||| | ||||||||| |||||||||||||||    
T  4794572 ttataactctaattaatactactttcatcactttcaattcaatatattccactttgcatttatgata 4794638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 3123538 - 3123630
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    ||||||| ||||||||| |||||||||  || ||| |||| ||||  ||| ||||||||| ||||||||||| ||| |||||||||||||||||    
T  3123538 atactccctccgtcccataataactgagtcaattgcaaaaaaaaaa-atctcaaaataactgagtcatttcactttccaatacaatattaatta 3123630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Complemental strand, 14284438 - 14284393
Alignment:
Q  105 tcccaaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||    
T  14284438 tcccaaaataactgagtcattttatttttcaatacaatattaatta 14284393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 13375636 - 13375593
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||    
T  13375636 caaaataactgagtcatttcacttttcaatacaatattaattac 13375593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 28526910 - 28527038
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattata 208  Q
    |||||||| || |||||||| ||||||||| ||||||||||||       | | |||||||| ||||||||| ||||||| |||||||||||| | ||||    
T  28526910 aaaataactgaatcatttcacttttcaatataatattaattactttttt-ctctttataactataattaatattactttcacaacttccaattcaatata 28527008  T
Q  209 ttccattttgcatttatgatagtggagaat 238  Q
     |||| ||| ||| |||| ||||| |||||    
T  28527009 gtccactttacatatatggtagtgaagaat 28527038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 3199897 - 3199963
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| | ||| |||||| | ||||||  | |||||||||||||||    
T  3199897 ttataactctaattaatactactttcaccactcccaattcaatatattatactttgcatttatgata 3199963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 43427194 - 43427128
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||| ||||||||||||||||||   ||| |||||| | ||||||| |||||||||||||||||    
T  43427194 ttataacactaattaatactactttcatcactcccaattcaatatattctattttgcatttatgata 43427128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 28926010 - 28925937
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatact 182  Q
    ||||||||  ||| ||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||    
T  28926010 caaaataattgagccatttcatttttcaatacaatattaattac-ttttttccctttataactctaattaatact 28925937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 39095630 - 39095705
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||||| ||||||||| |||||||   |||  ||||| | ||||||||| ||||||||||||||| ||||||||    
T  39095630 ttataactttaattaatattactttcatcactgacaattcaatatattccactttgcatttatgataatggagaat 39095705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 42881439 - 42881396
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||||| || |||||||| ||||||||||||||||||||||    
T  42881439 caaaataactgaatcatttcacttttcaatacaatattaattac 42881396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 564991 - 565085
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||| ||||||||| |||| || |  || ||| || | |||||| ||||||||||||  | |||||| | ||||||||||||||||||||||    
T  564991 atactccctccgtcccataatagctcagtcacttgcaagaaaaaagtgtcccaaaataactaaatcattttacttttcaatacaatattaattac 565085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 1908602 - 1908536
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||| || |||| | |||||||||| | ||||||| | ||| |||||||||||    
T  1908602 ttataactctaattaatattattttcaccacttccaattcaatatattctactttacatttatgata 1908536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 5425752 - 5425842
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaat 148  Q
    |||||| ||||||||| ||||| ||| ||||||| |||| || | | |||||| | ||| |  |||||||| |||||||||||||||||||    
T  5425752 tactccctccgtcccataataagtgagccatttgcaaaaaaatattgtcccaagaaaactgtctcatttcacttttcaatacaatattaat 5425842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 7931604 - 7931538
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| |||||  ||||| | ||||||  | ||| |||||||||||    
T  7931604 ttataactctaattaatactactttcacaactctcaattcaatatattttactttacatttatgata 7931538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 10394459 - 10394389
Alignment:
Q  56 tatactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcattt 126  Q
    |||||||| ||||||||| ||||||||| ||||||   |||  ||||| |||||||||||| |||||||||    
T  10394459 tatactccctccgtcccataataactgagccattttccaaaataaagtgtcccaaaataactgagtcattt 10394389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 13222067 - 13222133
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||| |||||||||| ||||||| | |||||||||| | ||||||  | |||||||||||||||    
T  13222067 ttataacactaattaatattactttcaccacttccaattcaatatattttactttgcatttatgata 13222133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 19515880 - 19515946
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||||||||||||||||||||||   |||| ||||| | ||||||  | |||||||||||||||    
T  19515880 ttataactctaattaatactactttcattacttacaattcaatatattttactttgcatttatgata 19515946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 24356110 - 24356176
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| | ||| |||||| |  |||||| | ||| |||||||||||    
T  24356110 ttataactctaattaatactactttcacgactcccaattcaacatattctactttacatttatgata 24356176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 37529179 - 37529113
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||| ||||||| | |||||||||| | | ||||| | ||| |||||||||||    
T  37529179 ttataactctaattaatattactttcaccacttccaattcaatttattctactttacatttatgata 37529113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 6685771 - 6685706
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgat 228  Q
    |||||| |||||||||||| |||||| | |||||||||| | ||||||| | ||| ||||||||||    
T  6685771 ttataattctaattaatacaactttcaccacttccaattcaatatattctactttacatttatgat 6685706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 44194598 - 44194639
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    |||||||| || |||||||| |||||||||||||||||||||    
T  44194598 aaaataactgaatcatttcacttttcaatacaatattaatta 44194639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 7426089 - 7425911
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| ||||||||||||||||||| ||||||| ||||  ||||| |||||||||||| ||| ||||||| ||||||||||||||||||||||          
T  7426089 tactccctccgtcccacaataactgagccatttgcaaaa--aaagtgtcccaaaataactgagccatttcacttttcaatacaatattaattactttttt 7425992  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
     ||   |||||||||| |||||||||||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  7425991 cccttatataactctagttaatactactttcacaacttccaattcaatatattccactttgcatttatgatagtggagaat 7425911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 33774253 - 33774072
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| |||||| ||||||||||||  |||||  |||| |||||| | |||||||||| ||||||||||| |||||||||||||||||||||           
T  33774253 tactccctccgtctcacaataactgagtcatttacaaaaaaaaagtgttccaaaataactgagtcatttcacttttcaatacaatattaattatttttt- 33774155  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaatacat 242  Q
      || |||||| ||||||||||||||||||| |||||| ||||| | ||||||||| ||||||| ||||||||||||||||||||    
T  33774154 --cctttataattctaattaatactactttcacaacttacaattcagtatattccactttgcatctatgatagtggagaatacat 33774072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 38182051 - 38181911
Alignment:
Q  93 aaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaa 192  Q
    |||| |||||| |||||||||||| ||||||||| | ||||||||| |||||||||||        | | |||||||||||||||||||||||||| |||    
T  38182051 aaaaaaaaagtttcccaaaataactgagtcattttacttttcaataaaatattaatta-tttctttctctttataactctaattaatactactttcacaa 38181953  T
Q  193 cttccaattgattatattccattttgcatttatgatagtgga 234  Q
    ||||||||| | ||||||| ||||||||||||||||||||||    
T  38181952 cttccaattcaatatattctattttgcatttatgatagtgga 38181911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 60 - 238
Target Start/End: Complemental strand, 46288640 - 46288464
Alignment:
Q  60 ctccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnc 159  Q
    |||| ||||| |||||||||| ||  ||||||||||| |||| | |||||||||||| ||| ||||||| ||||||||| |||||||||||        |    
T  46288640 ctccctccgttccacaataaccgagtcatttgtaaaaaaaaa-tgtcccaaaataactgagccatttcacttttcaatataatattaatta-attttttc 46288543  T
Q  160 cccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    || ||||||||||||||||||||||||||  ||||| ||||| | ||||||||| |||||||| |||||||| ||||||    
T  46288542 cctttataactctaattaatactactttcataactttcaattcaatatattccactttgcattaatgatagtcgagaat 46288464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 2846888 - 2846708
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| ||||||||| |||||||||  |||||  || | |||||| |||||||||||  ||||||||||| |||||||||||  |||||||||          
T  2846888 tactccctccgtcccataataactgagtcattttcaataaaaaagtgtcccaaaataagtgagtcatttcacttttcaatacatcattaattactttttt 2846789  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
     ||  ||||||||||||||||||||||||||   | |||||||| | ||||||||| |||| ||||||||||||||||||||    
T  2846788 -ccttttataactctaattaatactactttcatcaattccaattcaatatattccactttgaatttatgatagtggagaata 2846708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 238
Target Start/End: Original strand, 11616449 - 11616636
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaa------gtatcccaaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    ||||||| ||| ||||| ||||||||| ||||||| |||| ||||      || |||||||||||| ||| ||||||| |||||||||||||||||||||    
T  11616449 atactccctccatcccataataactgagccatttgcaaaaaaaaaaaacaagtgtcccaaaataactgagccatttcacttttcaatacaatattaatta 11616548  T
Q  151 cnnnnnnnccccttataactctaattaatactactttcgcaacttccaattga-ttatattccattttgcatttatgatagtggagaat 238  Q
    |       ||| ||||||||||||||||||| |||||| | ||| |||||| | |||||||||| ||||||| ||||||||||||||||    
T  11616549 ctttttt-ccctttataactctaattaatacaactttcaccactcccaattcaattatattccactttgcatatatgatagtggagaat 11616636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 238
Target Start/End: Complemental strand, 31581620 - 31581476
Alignment:
Q  93 aaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaa 192  Q
    |||| |||||||||| |||||||| ||||||||||| ||||||||||||||||||||||       ||  ||||||||||||||||||||||||||   |    
T  31581620 aaaaaaaaagtatcctaaaataactgagtcatttcacttttcaatacaatattaattac-ttttttccatttataactctaattaatactactttcatca 31581522  T
Q  193 cttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
     || ||||| | ||||||||||||| ||||||||||| ||||||||    
T  31581521 ttttcaattcaatatattccattttacatttatgatattggagaat 31581476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 55 - 241
Target Start/End: Original strand, 33584454 - 33584640
Alignment:
Q  55 ttatactccttccgtcccacaataactgatccatttgtaa-aagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnn 153  Q
    ||||||||| ||||||||| |||||||||  |||||  || || |||||| || ||||||||| ||| ||||||| |||| ||||||  |||||||||      
T  33584454 ttatactccctccgtcccataataactgaggcattttcaataaaaaaagtgtctcaaaataactgagccatttcacttttgaatacatcattaattactt 33584553  T
Q  154 nnnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaataca 241  Q
         ||| |||||||| |||||||||||||||||   ||| |||||| | ||||||||||||||||||||||||| |||||||||||    
T  33584554 tttt-ccctttataactataattaatactactttcatcactcccaattcaatatattccattttgcatttatgatactggagaataca 33584640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 57 - 201
Target Start/End: Original strand, 12308274 - 12308415
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||| |||||||||||||||| ||  |||||| |||| |||| | || ||||||||| ||||||||||| ||||||||||||||||||||||         
T  12308274 atactccctccgtcccacaataaccgagtcatttgaaaaaaaaaa-tgtctcaaaataactgagtcatttcaattttcaatacaatattaattacttttt 12308372  T
Q  157 nnccccttataactctaattaatactactttcgcaacttccaatt 201  Q
       |  |||||||||||||||||| ||||||| ||||||||||||    
T  12308373 t--catttataactctaattaatattactttcacaacttccaatt 12308415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 238
Target Start/End: Complemental strand, 29434785 - 29434613
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnncccctt 164  Q
    |||||| || ||||| ||| ||| ||| |||| |||||| || ||||||||| ||||||||||  ||| |||||||||||||||||        ||| ||    
T  29434785 tccgtctcaaaataattgagccaattgcaaaaaaaaagtgtctcaaaataactgagtcatttcgctttccaatacaatattaatta-ttttttccccttt 29434687  T
Q  165 ataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||||||||||||   | |  ||||| | ||||||||| ||||||||||||| ||||||||||    
T  29434686 ataactctaattaatactactttcatcattcacaattcaatatattccactttgcatttatgaaagtggagaat 29434613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 58 - 239
Target Start/End: Original strand, 29257442 - 29257622
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| |||||| || |||||||||  |||||  || | |||||| |||||||||||  |||  |||||| |||||||||||  |||||||||          
T  29257442 tactccatccgtctcataataactgagtcattttcaataaaaaagtgtcccaaaataagtgagctatttcacttttcaatacatcattaattactttttt 29257541  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
     ||| |||||||||||||||||| |||||||   ||| |||||| | ||||||||| |||||||||||||||||||| ||||    
T  29257542 -ccctttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgatagtggaaaata 29257622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 48981274 - 48981367
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||| ||||||||| |||||  || || |||| ||||  ||||| |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  48981274 tactccctccgtcccataataatcgagccgtttgcaaaaataaagtgtcccaaaataactgagtcatttcacttttcaatacaatattaattac 48981367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 238
Target Start/End: Original strand, 23703827 - 23703990
Alignment:
Q  75 aataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaat-attaattacnnnnnnnccccttataactcta 173  Q
    |||||||||  ||||||||||| |||||||||  |||||||| || |||||| | ||| ||||||||| |||||||||       ||  |||||||||||    
T  23703827 aataactgagtcatttgtaaaaaaaaagtatcataaaataactgaatcattttactttccaatacaattattaattactttttt-ccatttataactcta 23703925  T
Q  174 attaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||    | || ||||| | |||||| |||||| ||||||||||||||||||||    
T  23703926 attaatactacttttatcattttcaattcaatatatttcattttacatttatgatagtggagaat 23703990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 238
Target Start/End: Original strand, 30462911 - 30463090
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| ||||||||| ||||| |||  |||||| |||| |||| | ||  |||||||  ||||||||||| ||||| ||||||||||||| ||          
T  30462911 tactccctccgtcccataataattgagtcatttgcaaaaaaaaaatgtcataaaataattgagtcatttcacttttccatacaatattaatgactttttt 30463010  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
     ||  |||||||||||||||||| |||||||   | || ||||| | ||||||||||||| |||||||||| |||||||||    
T  30463011 -ccttttataactctaattaatattactttcatcattttcaattcaatatattccattttacatttatgattgtggagaat 30463090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 1643442 - 1643381
Alignment:
Q  167 aactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgat 228  Q
    |||||||||||||||||||||| |||||| ||||| | ||||||||| ||||||||||||||    
T  1643442 aactctaattaatactactttcccaactttcaatttaatatattccactttgcatttatgat 1643381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 34964028 - 34963894
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagta----tcccaaaataacggagtcatttcatttttcaatacaatattaattacn 152  Q
    ||||||| |||||| || |||||||||  ||||||||||| ||||  |    |||||||||||| ||||||||||| ||||||||||| ||||||||||     
T  34964028 atactccatccgtctcataataactgagtcatttgtaaaaaaaaaaaaaatgtcccaaaataactgagtcatttcacttttcaatacagtattaattac- 34963930  T
Q  153 nnnnnnccccttataactctaattaatactactttc 188  Q
          ||| |||||||||||||||||| |||||||    
T  34963929 ttttttccctttataactctaattaatattactttc 34963894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 37264312 - 37264378
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| | ||| |||||| | ||||||| | |||||||||||||||    
T  37264312 ttataactctaattaatactactttcaccactcccaattcaatatattctactttgcatttatgata 37264378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 5724872 - 5724740
Alignment:
Q  105 tcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgat 204  Q
    |||||||||||  ||| ||||||| ||||||||||||||||||| ||       |   ||||||||||||||||||||||||||   | ||| |||| |     
T  5724872 tcccaaaataagtgagccatttcacttttcaatacaatattaatcactttttttctt-ttataactctaattaatactactttcttcatttctaattcaa 5724774  T
Q  205 tatattccattttgcatttatgatagtggagaat 238  Q
    |||||| || ||| ||||||||||||||||||||    
T  5724773 tatatttcactttacatttatgatagtggagaat 5724740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 40590990 - 40590909
Alignment:
Q  105 tcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactacttt 187  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||       ||  |||||||||||||||||||||||||    
T  40590990 tcccaaaataactgagtcatttcacttttaaatacaatattaattac-ttttttccttttataactctaattaatactacttt 40590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 44604689 - 44604510
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    ||||||||  ||| || ||||||||| ||||||  || | |||||| |||||||||||  ||| ||||||| |||||||||||  ||||||||           
T  44604689 tactccttatgtctcataataactgaaccattttcaatataaaagtgtcccaaaataagtgagccatttcacttttcaatacatcattaatta-tgtttt 44604591  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
     ||  ||||||||||||||||||||||||||   |||  ||| | | ||||||||| ||||| |||||||||||||||||||    
T  44604590 tccttttataactctaattaatactactttcatcactctcaactcaatatattccactttgc-tttatgatagtggagaata 44604510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 46095611 - 46095568
Alignment:
Q  107 ccaaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  46095611 ccaaaataaccgagtcatttcacttttcaatacaatattaatta 46095568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 25778743 - 25778809
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||||||||||||||||||||||   |||||||||| | ||||||  | |||||||||||||||    
T  25778743 ttataactctaattaatactactttcatcacttccaattcaatatattttactttgcatttatgata 25778809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 32775876 - 32776048
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaa-tattaattacnnnn 155  Q
    ||||||| ||||||||| |||||||||  |||||| |||| || | | |||||||| ||  ||  ||||||| ||| |||||||| ||||||||||        
T  32775876 atactccctccgtcccataataactgaggcatttgcaaaaaaatattgtcccaaaaaaattgacccatttcactttccaatacaaatattaattactttt 32775975  T
Q  156 nnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
       ||  |||||||||||| ||||||||||||| | ||| |||||| | ||||||| | ||| |||||||||||    
T  32775976 tt-ccaattataactctaaataatactactttcaccactcccaattcaatatattctactttacatttatgata 32776048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 36117606 - 36117649
Alignment:
Q  107 ccaaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    |||||||||| | ||||||||| |||||||||||||||||||||    
T  36117606 ccaaaataaccgtgtcatttcacttttcaatacaatattaatta 36117649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 37490726 - 37490651
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||| ||||||||||| ||||||    |||  ||||| | ||||||||| ||||||||||||||||||||||||    
T  37490726 ttataattctaattaatattacttttatcactatcaattcaatatattccactttgcatttatgatagtggagaat 37490651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 182
Target Start/End: Original strand, 39693721 - 39693809
Alignment:
Q  93 aaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatact 182  Q
    |||| |||||| |||||||||||  ||||||||||| |||||||||||  |||||||||       ||| ||||||||||||||||||||    
T  39693721 aaaaaaaaagtgtcccaaaataagtgagtcatttcacttttcaatacatcattaattac-ttttttccctttataactctaattaatact 39693809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 151
Target Start/End: Original strand, 8149917 - 8149947
Alignment:
Q  121 tcatttcatttttcaatacaatattaattac 151  Q
    |||||||||||||||||||||||||||||||    
T  8149917 tcatttcatttttcaatacaatattaattac 8149947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 26938651 - 26938581
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttca 128  Q
    |||||| |||||||||||||| ||||  |||||| |||  |||||| ||||||||||||  ||||||||||    
T  26938651 tactccctccgtcccacaatagctgagtcatttgcaaataaaaagtgtcccaaaataacttagtcatttca 26938581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 27234503 - 27234577
Alignment:
Q  164 tataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||| |||||||||||| ||||   |||  ||||| | |||||| | |||||||||||||||||||||||||    
T  27234503 tataactttaattaatactattttcatcactcacaatttaatatatttcgttttgcatttatgatagtggagaat 27234577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 201
Target Start/End: Original strand, 27621840 - 27621878
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaatt 201  Q
    |||||||||||||||||||||||||| ||||| ||||||    
T  27621840 ttataactctaattaatactactttcacaactcccaatt 27621878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 30659588 - 30659522
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| | ||||| |||| | ||||||| | |||  ||||||||||    
T  30659588 ttataactctaattaatactactttcaccacttcaaattcaatatattctactttatatttatgata 30659522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 38589733 - 38589799
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||| |||||||||||||||||| | ||| |||||| | ||||||| | ||| |||||||||||    
T  38589733 ttataacactaattaatactactttcaccactcccaattcaatatattctactttacatttatgata 38589799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 28923388 - 28923347
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    |||||||| || | ||||||||||||||||||||||||||||    
T  28923388 aaaataactgacttatttcatttttcaatacaatattaatta 28923347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 194 - 239
Target Start/End: Complemental strand, 49100579 - 49100534
Alignment:
Q  194 ttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    |||||||| | ||||||||| ||| |||||||||||||||||||||    
T  49100579 ttccaattcaatatattccactttacatttatgatagtggagaata 49100534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 49100986 - 49100921
Alignment:
Q  78 aactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaata 143  Q
    |||||| |||||||||||| |||| | || ||||||||  ||||||||| | ||||||||||||||    
T  49100986 aactgagccatttgtaaaaaaaaaatgtctcaaaataattgagtcattttacttttcaatacaata 49100921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 151
Target Start/End: Complemental strand, 29997176 - 29997148
Alignment:
Q  123 atttcatttttcaatacaatattaattac 151  Q
    |||||||||||||||||||||||||||||    
T  29997176 atttcatttttcaatacaatattaattac 29997148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 48981655 - 48981731
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    |||||| ||||||||| ||||||||    | |||||||| | ||||||||| ||| |||||||||||||||| ||||    
T  48981655 ttataattctaattaacactacttttatcatttccaatttaatatattccactttacatttatgatagtggataata 48981731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 65 - 238
Target Start/End: Complemental strand, 18849963 - 18849792
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnncccctt 164  Q
    ||||||||||||||| ||| |||||||||||| |||| | |||||||||||| ||||||||||| ||||||||| ||||||||||||       ||| ||    
T  18849963 tccgtcccacaataattgagccatttgtaaaaaaaaa-tgtcccaaaataactgagtcatttcacttttcaataaaatattaattactttttt-cccttt 18849866  T
Q  165 ataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||||||||||||| ||||||| |||||||||||| | |||||| || ||||||||||||||||||||||||    
T  18849865 ataactctaattaatattactttcacaacttccaattcaatatatttcactttgcatttatgatagtggagaat 18849792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 57 - 238
Target Start/End: Original strand, 33047392 - 33047566
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    |||||| |||||||||| ||||| ||| ||||||| |||| |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||         
T  33047392 atactctttccgtcccataataattgagccatttgcaaaaaaaaagtgtcccaaaataactgagtcatttcacttttcaatacaatattaattacatttt 33047491  T
Q  157 nnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
          ||||||||||||| |||||||   ||   |||||||||| | ||||||||| |||| |||||||||||||||||||    
T  33047492 tt----ttataactctaatcaatacta---tcatcacttccaattcaatatattccactttgtatttatgatagtggagaat 33047566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 93 - 241
Target Start/End: Complemental strand, 54729660 - 54729514
Alignment:
Q  93 aaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaa 192  Q
    |||| ||||||||| ||||||||| || |||||||| ||| ||||||||||||||||||       ||| ||||||||||||||||||||||||||   |    
T  54729660 aaaaaaaaagtatctcaaaataactgaatcatttcactttccaatacaatattaattac-ttttttccctttataactctaattaatactactttcatca 54729562  T
Q  193 cttccaattgattatattccattttgcatttatgatagtggagaataca 241  Q
    | | ||||| | ||||||||| |||||||||||||||||||||||||||    
T  54729561 cct-caattcaatatattccactttgcatttatgatagtggagaataca 54729514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 238
Target Start/End: Original strand, 8294961 - 8295103
Alignment:
Q  93 aaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaa 192  Q
    |||| |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||       ||| |||||||||||||| ||||||||||  ||     
T  8294961 aaaaaaaaagtgtcccaaaataaccgagtcatttcacttttcaatacaatattaattac-ctttttccctttataactctaatttatactacttt--cat 8295057  T
Q  193 cttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    || |||||| | ||||||  |  |||||||||||||||||||||||    
T  8295058 ctcccaattcaatatattatacattgcatttatgatagtggagaat 8295103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 59 - 239
Target Start/End: Complemental strand, 42024412 - 42024233
Alignment:
Q  59 actccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnn 158  Q
    ||||| ||||||||| |||||||||  |||||  || | |||||| ||| || ||||  ||||||||||| |||||||||||  ||||||||            
T  42024412 actccctccgtcccataataactgagtcattttcaataaaaaagtgtcctaagataaatgagtcatttcacttttcaatacatcattaatta-ttttttt 42024314  T
Q  159 ccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    ||| |||||||| |||||||||||||||||   |||||||||| | ||||||||| ||||||||||| |||||||||||||    
T  42024313 ccctttataactataattaatactactttcatcacttccaattcaatatattccactttgcatttataatagtggagaata 42024233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 1796350 - 1796282
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagt 231  Q
    |||||||||||||| ||||||||||| |||||||||||| | ||||||||| |||||||||||||||||    
T  1796350 ttataactctaatttatactactttcacaacttccaattcaatatattccactttgcatttatgatagt 1796282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 150
Target Start/End: Complemental strand, 1796639 - 1796551
Alignment:
Q  63 cttccgtcccacaataactgatccatttgtaaaagaaa-agtatcccaaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    |||||||||||| |||||||| ||||||| |||| ||| ||| |||||||||||| | ||||||||| |||||||||||||||||||||    
T  1796639 cttccgtcccacgataactgagccatttgcaaaaaaaagagtgtcccaaaataactgggtcatttcagttttcaatacaatattaatta 1796551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 232
Target Start/End: Original strand, 31862699 - 31862857
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnncccctt 164  Q
    ||||||| ||||||| |||  |||||| |||| ||||   |||||||||||| ||||||||||| |||||||||| ||||||||||        ||| ||    
T  31862699 tccgtccaacaataattgagtcatttgaaaaaaaaaa---tcccaaaataaccgagtcatttcacttttcaatacgatattaatta-tttttttcccttt 31862794  T
Q  165 ataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtg 232  Q
    |||||||||||||||||||||||| ||||||| ||     ||||||||| ||||||| ||||||||||    
T  31862795 ataactctaattaatactactttcacaacttctaa-----tatattccactttgcatctatgatagtg 31862857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 238
Target Start/End: Complemental strand, 39976596 - 39976423
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnncccctt 164  Q
    |||||| || |||||||||  |||||| ||||  ||||| |||||||||| | |||||||||||||||||||| |||||||||||||       | | ||    
T  39976596 tccgtctcataataactgagtcatttgcaaaaacaaagtgtcccaaaatatctgagtcatttcatttttcaatgcaatattaattactttttttctcttt 39976497  T
Q  165 ataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||| || |||||||||||||||   |||  ||||| | ||||||||| ||||||||| | | ||||||||||    
T  39976496 ataacactgattaatactactttcatcactctcaattcaatatattccactttgcatttctaacagtggagaat 39976423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 39979726 - 39979854
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattata 208  Q
    |||||||  |||| |||||| ||||||||||||||||||||||       ||| |||||||||||||||||| |||||||   | |||||||| | ||||    
T  39979726 aaaataattgagttatttcacttttcaatacaatattaattactttttc-ccctttataactctaattaatattactttcatcatttccaattcaatata 39979824  T
Q  209 ttccattttgcatttatgatagtggagaat 238  Q
    ||||| ||| ||||||||||||||||||||    
T  39979825 ttccactttacatttatgatagtggagaat 39979854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 41710356 - 41710176
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| |||||| || |||||||||  |||||  || | |||||| |||||||||||  |||  |||||| |||||||||||  |||||||||          
T  41710356 tactccatccgtctcataataactgagtcattttcaataaaaaagtgtcccaaaataagtgagctatttcacttttcaatacatcattaattactttttt 41710257  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
     ||| |||||||||||||||||| |||||||   ||| |||||| | ||||||||| |||||||||||||||||||| ||||    
T  41710256 -ccctttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttatgatagtggaaaata 41710176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 25149450 - 25149516
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| |||||||||||| | ||||||||| ||| |||||||||||    
T  25149450 ttataactctaattaatactactttcacaacttccaattcaatatattccactttacatttatgata 25149516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 58 - 238
Target Start/End: Original strand, 48740416 - 48740594
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| |||||| || |||||||||  |||||| |||| |||| | || ||||||||| ||||||||||| ||||||| ||||||||||||||          
T  48740416 tactccctccgtctcataataactgagtcatttgcaaaaaaaaa-tgtctcaaaataactgagtcatttcacttttcaaaacaatattaattac-ttttt 48740513  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
     ||| |||||||||||||||||| ||||||    | ||  |||| | ||||||||| ||| ||||||||||||||||||||    
T  48740514 tccctttataactctaattaatattacttttatcatttttaattcaatatattccactttacatttatgatagtggagaat 48740594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 242
Target Start/End: Original strand, 32559162 - 32559241
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaatacat 242  Q
    ||||||||||||||||||||||||||   ||| | |||| | |||||||||||||||| |||| ||||||||||||||||    
T  32559162 ttataactctaattaatactactttcatcactcctaatttaatatattccattttgcacttattatagtggagaatacat 32559241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 143
Target Start/End: Original strand, 43420918 - 43421005
Alignment:
Q  56 tatactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaata 143  Q
    |||||||| |||||||||||||||||||| | |||| |||| |||| | | |||||||||| ||| ||||||| ||||||||||||||    
T  43420918 tatactccctccgtcccacaataactgattcttttgcaaaaaaaaaatgttccaaaataactgagccatttcacttttcaatacaata 43421005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 3685957 - 3686085
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattata 208  Q
    |||||||| ||||||||||| ||| |||||||||||||||||        ||| |||||||||||||||||| |||||||   |||  ||||| | ||||    
T  3685957 aaaataactgagtcatttcactttccaatacaatattaatta-ttttttcccctttataactctaattaatattactttcatcactctcaattcaatata 3686055  T
Q  209 ttccattttgcatttatgatagtggagaat 238  Q
    ||| | ||||||||||| ||||||||||||    
T  3686056 ttcaactttgcatttataatagtggagaat 3686085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 238
Target Start/End: Original strand, 43421318 - 43421374
Alignment:
Q  182 tactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||| |||||||||||| | |||||| |||||||||||||||||||||||||||    
T  43421318 tactttcacaacttccaattcaatatatttcattttgcatttatgatagtggagaat 43421374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 49306586 - 49306662
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    ||||||||||||||||||||||||||   ||| | |||| | ||||||||| |||||||||||||||| ||||||||    
T  49306586 ttataactctaattaatactactttcatcactcctaattcaatatattccactttgcatttatgataggggagaata 49306662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 234
Target Start/End: Original strand, 49812171 - 49812299
Alignment:
Q  105 tcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgat 204  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||        ||| ||||||||||||||||||||| ||||     | |||||  |     
T  49812171 tcccaaaataactgagtcatttcacttttcaatacaatattaatta-tttttttccctttataactctaattaatactattttcatctttcccaatacaa 49812269  T
Q  205 tatattccattttgcatttatgatagtgga 234  Q
    ||||||||| ||| ||||||||||||||||    
T  49812270 tatattccactttacatttatgatagtgga 49812299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 29550835 - 29550769
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| ||||| |||||| | ||||||| | ||| |||||||||||    
T  29550835 ttataactctaattaatactactttcacaactcccaattcaatatattctactttacatttatgata 29550769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 41203681 - 41203811
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattat 207  Q
    |||| |||| ||||||||||| || |||||||||||||||||||       |   |||||||||||||||||||||||||    |||| ||||| | |||    
T  41203681 caaactaactgagtcatttcacttatcaatacaatattaattactttttttcattttataactctaattaatactacttttatcactttcaattcaatat 41203780  T
Q  208 attccattttgcatttatgatagtggagaat 238  Q
    |||||| |||| ||||||| ||||| |||||    
T  41203781 attccactttgtatttatggtagtgaagaat 41203811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 239
Target Start/End: Original strand, 42544112 - 42544284
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnncccctt 164  Q
    |||||| || ||||||||| ||||||  |||| |||||| ||  |||||||  ||||||||||| |||||||||||  ||||| |||       ||  ||    
T  42544112 tccgtctcataataactgagccattttcaaaa-aaaagtgtcataaaataaatgagtcatttcacttttcaatacatcattaactactttttttcct-tt 42544209  T
Q  165 ataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    |||||||||||||||| ||||||    |||  ||||| | ||||||||| |||||||||||||||||||||||||    
T  42544210 ataactctaattaatattacttttatcactcacaattcaatatattccactttgcatttatgatagtggagaata 42544284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 17237042 - 17237110
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagt 231  Q
    ||||||||||||||||||||||||||    ||| ||||| | ||||||||| |||||||||||||||||    
T  17237042 ttataactctaattaatactactttcatcgctttcaattcaatatattccactttgcatttatgatagt 17237110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 8065488 - 8065535
Alignment:
Q  104 atcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||||||||| |||||||| || ||||||||||||||||||||||    
T  8065488 atcccaaaataaccgagtcattccacttttcaatacaatattaattac 8065535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 22872496 - 22872421
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||||||||||||||| |||||||   |||  ||||| | ||||||||| ||||||||||||||| ||||||||    
T  22872496 ttataactctaattaatattactttcatcactctcaattcaatatattccactttgcatttatgataatggagaat 22872421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 242
Target Start/End: Complemental strand, 26799324 - 26799245
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaatacat 242  Q
    |||||||||||||||||| |||||||   | |  ||||| | ||||||| |||||||||||||||||||||| |||||||    
T  26799324 ttataactctaattaatagtactttcatcattctcaattcaatatattctattttgcatttatgatagtggaaaatacat 26799245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 242
Target Start/End: Complemental strand, 40881357 - 40881221
Alignment:
Q  106 cccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgatt 205  Q
    ||||||||||| ||||||||||| |||||||||||||| |||||||       ||  ||||||||||||| ||||||||||||   | ||| |||| | |    
T  40881357 cccaaaataaccgagtcatttcacttttcaatacaatagtaattac-ttttttccttttataactctaataaatactactttc---atttctaattcaat 40881262  T
Q  206 a----tattccattttgcatttatgatagtggagaatacat 242  Q
    |    ||||||| ||| ||||||||||||||||||||||||    
T  40881261 atatttattccactttacatttatgatagtggagaatacat 40881221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 10099833 - 10099767
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| ||||| |||||| | ||||||| | |||  ||||||||||    
T  10099833 ttataactctaattaatactactttcacaactcccaattcaatatattctactttaaatttatgata 10099767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 16493403 - 16493345
Alignment:
Q  164 tataactctaattaatactactttcgcaacttccaattgattatattccattttgcatt 222  Q
    ||||||||||||||||| |||||||  ||||||||||| | ||||||||| ||||||||    
T  16493403 tataactctaattaatattactttcataacttccaattcaatatattccactttgcatt 16493345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 38976990 - 38977064
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaa 237  Q
    ||||||||||||||||||||||||||   | || ||||| | ||||||||| ||| |||||||||||| ||||||    
T  38976990 ttataactctaattaatactactttcatcattttcaattcaatatattccactttacatttatgataggggagaa 38977064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 42132812 - 42132878
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||| |||||||||| ||||||| | |||||||||| | ||||||| | |||||||||||||||    
T  42132812 ttataacactaattaatattactttcaccacttccaattcaatatattctactttgcatttatgata 42132878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 28330687 - 28330780
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||| ||||||||| ||||||||| ||||||| |||| || | | ||||| || ||  ||  ||||||| ||||||||||||||||||||||    
T  28330687 tactccctccgtcccataataactgacccatttgcaaaaaaatactgtcccataaaaattgacccatttcacttttcaatacaatattaattac 28330780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 29644268 - 29644340
Alignment:
Q  75 aataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaat 148  Q
    |||||||||  |||||| |||| |||| | |||||||||||| ||| ||||||| |||||||||||||||||||    
T  29644268 aataactgagtcatttgcaaaa-aaaattgtcccaaaataactgagacatttcacttttcaatacaatattaat 29644340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 146
Target Start/End: Complemental strand, 29815259 - 29815222
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatatta 146  Q
    |||||||||||||||||||| |||||||||||||||||    
T  29815259 aaaataacggagtcatttcacttttcaatacaatatta 29815222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 37316070 - 37315964
Alignment:
Q  122 catttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcat 221  Q
    ||||||| ||||||||||||||||||||||       ||  ||||||| |||||||||||||||||| | ||| |||||| |  |||||| | |||||||    
T  37316070 catttcacttttcaatacaatattaattacattttt-ccaattataacactaattaatactactttcaccactcccaattcaacatattctactttgcat 37315972  T
Q  222 ttatgata 229  Q
    ||||||||    
T  37315971 ttatgata 37315964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 28974252 - 28974292
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaat 148  Q
    ||||||||| ||||||||||| |||||||||||||||||||    
T  28974252 caaaataactgagtcatttcacttttcaatacaatattaat 28974292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 238
Target Start/End: Original strand, 41436375 - 41436555
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||| ||||||||| ||||||||| |  |||||| || || | | ||| |||||||| ||   |||||| |||||||||||||||||||||          
T  41436375 atactccctccgtcccataataactgagctttttgtagaaaaatattgtcctaaaataaccgaccaatttcacttttcaatacaatattaatta-ttttt 41436473  T
Q  157 nnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
      |   ||||||||||||||||||||||||||   | |  ||||| |  |||||| | ||||||||||||||||||||||||    
T  41436474 ttctaattataactctaattaatactactttcatcattcgcaattcaaaatattctactttgcatttatgatagtggagaat 41436555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 51572336 - 51572268
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagt 231  Q
    |||||||||||||||||||||||||    |||||||||| | |||||| || ||| |||||||||||||    
T  51572336 ttataactctaattaatactacttttatcacttccaattcaatatattacactttacatttatgatagt 51572268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 51572440 - 51572348
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaatt 149  Q
    ||||||| | ||||||| ||||||||| || ||||||||| || | | ||| |||||||  || | |||||| ||||||||||||||||||||    
T  51572440 atactccgttcgtcccataataactgaaccttttgtaaaaaaatattgtcctaaaataattgacttatttcacttttcaatacaatattaatt 51572348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 229
Target Start/End: Original strand, 8759777 - 8759844
Alignment:
Q  162 cttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||| |||||||||| || |||| ||||| |||||| | ||||||| | |||||||||||||||    
T  8759777 cttataacactaattaataataatttcacaactcccaattcaatatattctactttgcatttatgata 8759844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 27977146 - 27977221
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||||||  ||||||   |||  ||||| | ||||||||| ||||||||||| ||||||||||||    
T  27977146 ttataactctaattaatatcactttcatcactctcaattcaatatattccactttgcatttataatagtggagaat 27977221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 34020939 - 34021022
Alignment:
Q  67 cgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    ||||||| |||||| ||  |||||| |||| |||| | || ||||||||  ||||||||||| ||||||||||||||| |||||    
T  34020939 cgtcccataataaccgagtcatttgcaaaaaaaaaatgtctcaaaataagtgagtcatttcacttttcaatacaatataaatta 34021022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 42186000 - 42185828
Alignment:
Q  66 ccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnncccctta 165  Q
    |||||||| |||||||||  |||||  || | |||| | |||||||||||  ||||||||| | |||||||||||  |||||||||       ||  |||    
T  42186000 ccgtcccataataactgagtcattttcaataaaaaaatgtcccaaaataagtgagtcattttacttttcaatacatcattaattactttttt-ccattta 42185902  T
Q  166 taactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    |||||||||||||||||||||||   |||  ||||| | |||||| ||  ||| ||||||||||||||| ||||    
T  42185901 taactctaattaatactactttcatcactctcaattcaatatatttcaccttgtatttatgatagtggataata 42185828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 283682 - 283596
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||||| ||||||| |  |||||| ||||  ||||| |||||||||| |  || ||||||| |||||||| |||||||||||||    
T  283682 tccgtcccataataactaagtcatttgcaaaaacaaagtgtcccaaaatatctaagccatttcacttttcaatgcaatattaattac 283596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 34791137 - 34791071
Alignment:
Q  85 ccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||| |||| |||| ||||| |||||||  ||||||||| | |||| |||||||||||||||||    
T  34791137 ccatttgcaaaaaaaaattatcctaaaataattgagtcattttactttttaatacaatattaattac 34791071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 39053009 - 39052943
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| | |||  ||||| | ||||||| | ||| |||||||||||    
T  39053009 ttataactctaattaatactactttcaccactctcaattcaatatattctactttacatttatgata 39052943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 47846898 - 47846964
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||||||||||||||||||||||   ||| | |||| | |||||| || |||||||||||||||    
T  47846898 ttataactctaattaatactactttcatcactcctaattcaatatatttcactttgcatttatgata 47846964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Complemental strand, 48400791 - 48400749
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||||  ||||||||||| ||||||||||||||||||||||    
T  48400791 aaaataattgagtcatttcacttttcaatacaatattaattac 48400749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 151
Target Start/End: Original strand, 54217300 - 54217330
Alignment:
Q  121 tcatttcatttttcaatacaatattaattac 151  Q
    |||||||||||||||||||||||||||||||    
T  54217300 tcatttcatttttcaatacaatattaattac 54217330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 150
Target Start/End: Complemental strand, 1825409 - 1825368
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    |||||||| ||||||||||| ||||||||| |||||||||||    
T  1825409 aaaataactgagtcatttcacttttcaatataatattaatta 1825368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 101
Target Start/End: Complemental strand, 9093947 - 9093902
Alignment:
Q  56 tatactccttccgtcccacaataactgatccatttgtaaaagaaaa 101  Q
    |||||||||||||||||| |||||||||  ||||||||||| ||||    
T  9093947 tatactccttccgtcccataataactgagtcatttgtaaaaaaaaa 9093902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 242
Target Start/End: Complemental strand, 14009700 - 14009663
Alignment:
Q  205 tatattccattttgcatttatgatagtggagaatacat 242  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  14009700 tatatttcattttgcatttataatagtggagaatacat 14009663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 238
Target Start/End: Original strand, 51527363 - 51527492
Alignment:
Q  107 ccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgatta 206  Q
    ||||| |||| ||||||||||| |||| |||||||||||||||||       ||  |||||||||||||||||| || ||||   | || ||||| | ||    
T  51527363 ccaaagtaactgagtcatttcactttttaatacaatattaattac-ttttttccttttataactctaattaatatta-tttcatcattttcaattcaata 51527460  T
Q  207 tattccattttgcatttatgatagtggagaat 238  Q
    |||| || ||| ||||||||||||||||||||    
T  51527461 tatttcactttacatttatgatagtggagaat 51527492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 9093839 - 9093795
Alignment:
Q  194 ttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||||| | ||||||||| ||| ||||||||||||||||||||    
T  9093839 ttccaatttaatatattccactttacatttatgatagtggagaat 9093795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 39258380 - 39258312
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagt 231  Q
    |||||||| ||||||||| |||||||   |||  ||||| | ||||||||||||| |||||||||||||    
T  39258380 ttataactttaattaataatactttcatcactctcaatttaatatattccattttacatttatgatagt 39258312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 3604812 - 3604633
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| |||||||||||||||| || |||||||||||  |||| | ||| |||||||| ||||||||||| |||||||||||||||||||||           
T  3604812 tactccctccgtcccacaataacagagccatttgtaaataaaaaatgtcctaaaataactgagtcatttcacttttcaatacaatattaatta-tttttt 3604714  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
     ||| |||||||||||||||||| ||||||| |||||||||||| | ||||||||| ||||||||||  ||| ||||||||    
T  3604713 tccctttataactctaattaatattactttcacaacttccaattcaatatattccactttgcatttacaataatggagaat 3604633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 241
Target Start/End: Complemental strand, 30064161 - 30063979
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||||||||||||| ||||| |||  || ||| |||| |||| | ||| |||||||| ||||||||||| ||| ||||||||||||||||||         
T  30064161 atactccttccgtcccataataattgagtcaattgcaaaaaaaaa-tgtcctaaaataactgagtcatttcactttccaatacaatattaattacttttt 30064063  T
Q  157 nnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaataca 241  Q
      ||| |||||||||||||||||| |||||||   ||| |||||| | ||||||||| ||||||||||| |||||||||||||||    
T  30064062 t-ccctttataactctaattaatattactttcatcactcccaattcaatatattccactttgcatttataatagtggagaataca 30063979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 65 - 238
Target Start/End: Original strand, 15081325 - 15081497
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnncccctt 164  Q
    ||||||||| |||||||||  ||| ||  ||| |||||| |||||||||||| ||   |||||| ||||||||||||||||||||||       ||| ||    
T  15081325 tccgtcccataataactgagtcatctgcgaaaaaaaagtgtcccaaaataactgaacaatttcacttttcaatacaatattaattactttttt-cccttt 15081423  T
Q  165 ataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||||||||||||  || |||||||| | ||||||||| ||| | ||||||||||||||||||    
T  15081424 ataactctaattaatactactttcataatttccaattcaatatattccactttacgtttatgatagtggagaat 15081497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 31265725 - 31265853
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattat 207  Q
    |||||||||  |||||||||| |||||||||||||||||||||         || |||||||||||||||||| ||||||| |||||||||||| | |||    
T  31265725 caaaataacttagtcatttcacttttcaatacaatattaattattttttt--cctttataactctaattaatattactttcacaacttccaattcaatat 31265822  T
Q  208 attccattttgcatttatgatagtggagaat 238  Q
    |||||| ||| ||||||||||||||||||||    
T  31265823 attccactttacatttatgatagtggagaat 31265853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 148
Target Start/End: Original strand, 7359128 - 7359228
Alignment:
Q  48 taaaacattatactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaa 147  Q
    ||||||||  |||| | ||||| ||||||||| ||| ||||||| |||| |||| | |||||||||||| ||  ||||||| ||||||||||||||||||    
T  7359128 taaaacatagtacttcctccgttccacaataaatgagccatttgcaaaaaaaaaatgtcccaaaataactgaaccatttcacttttcaatacaatattaa 7359227  T
Q  148 t 148  Q
    |    
T  7359228 t 7359228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 238
Target Start/End: Original strand, 33109268 - 33109447
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| ||||||||| ||||||||| | ||||| |||| |||||| | |||||| ||| ||| ||||| | |||||||||||||| ||||||           
T  33109268 tactccctccgtcccataataactgagctatttgcaaaaaaaaagtgttccaaaacaactgagccattttacttttcaatacaatactaatta-tttttt 33109366  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
     ||  ||||||||||||||||||||||||||   | |  ||||| | |||||| |||||| |||| | |||||||||||||    
T  33109367 tccatttataactctaattaatactactttcatcattctcaattcaatatatttcattttacattaacgatagtggagaat 33109447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 238
Target Start/End: Original strand, 4238335 - 4238495
Alignment:
Q  76 ataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaat 175  Q
    |||| ||| |||||||||| | |||||| ||| |||||||  ||||||||| || ||||||||||||||||||||        | | |||||||| ||||    
T  4238335 ataattgagccatttgtaagaaaaaagtgtcctaaaataattgagtcattttatctttcaatacaatattaatta-tttttttctctttataactttaat 4238433  T
Q  176 taatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||| ||| |||||| ||||| | || ||| || ||| |||||||||||||| |||||    
T  4238434 taatactac-ttcacaactttcaattcaatagatttcactttacatttatgatagtgaagaat 4238495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 238
Target Start/End: Complemental strand, 7301232 - 7301113
Alignment:
Q  118 gagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccatttt 217  Q
    ||||||||||| |||||||||||||||||||||        ||| |||||||||||| ||||| |||||||   | || ||||| | ||||||||| |||    
T  7301232 gagtcatttcacttttcaatacaatattaatta-tttttttccctttataactctaactaatattactttcatcattttcaattcaatatattccacttt 7301134  T
Q  218 gcatttatgatagtggagaat 238  Q
     ||||||||||| ||||||||    
T  7301133 acatttatgataatggagaat 7301113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 15371971 - 15371905
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||| |||||||||||||||||| | ||| |||||| | ||||||| | |||||||||||||||    
T  15371971 ttataacactaattaatactactttcaccactcccaattcaatatattctactttgcatttatgata 15371905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 33018052 - 33017986
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| | ||| |||||| | ||||||| | ||| |||||||||||    
T  33018052 ttataactctaattaatactactttcaccactcccaattcaatatattctactttacatttatgata 33017986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 33921577 - 33921511
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||  ||||| |||||| | ||||||| | ||| |||||||||||    
T  33921577 ttataactctaattaatactacttttacaactcccaattcaatatattctactttacatttatgata 33921511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 34803815 - 34803749
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||| ||||||||||||||||| |||||  ||||| | ||||||  |||||||||||||||||    
T  34803815 ttataactataattaatactactttcacaactctcaattcaatatattttattttgcatttatgata 34803749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 4552908 - 4552974
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||| |||||||||| ||||||| | ||| |||||| | ||||||| | |||||||||||||||    
T  4552908 ttataacactaattaatattactttcaccactcccaatttaatatattctaatttgcatttatgata 4552974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 26356268 - 26356333
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgat 228  Q
    |||||||| |||||||||||||||||   ||||| |||| | |||||| || ||||||||||||||    
T  26356268 ttataactttaattaatactactttcatcacttctaattcaatatatttcactttgcatttatgat 26356333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 34915964 - 34915923
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaatt 149  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||    
T  34915964 caaaataactgagtcatttcacttttcaataaaatattaatt 34915923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 238
Target Start/End: Complemental strand, 54122434 - 54122257
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| |||||||||| |||||| |  ||||| ||||| |||||| ||||||||||||  |||||||||| ||||||||| || |||||||||          
T  54122434 tactccctccgtcccacgataactaagtcattt-taaaaaaaaagtgtcccaaaataacttagtcatttcacttttcaatataa-attaattactttttt 54122337  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
     ||  ||||||||||||| |||||||||||| |||||||||||| | |||||| || ||||||||||||||||||||||||    
T  54122336 -ccttttataactctaatcaatactactttcacaacttccaattcaatatatttcactttgcatttatgatagtggagaat 54122257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 232
Target Start/End: Complemental strand, 21296663 - 21296542
Alignment:
Q  110 aaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattatat 209  Q
    ||||||| ||||||||||| ||||||||||||||||||||||       ||  |||||||||||||||||||||||||| |||||||||||| | |||||    
T  21296663 aaataactgagtcatttcacttttcaatacaatattaattactttttt-ccttttataactctaattaatactactttcacaacttccaattcaatatat 21296565  T
Q  210 tccattttgcatttatgatagtg 232  Q
    || | ||||||||||||||||||    
T  21296564 tctactttgcatttatgatagtg 21296542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 39365230 - 39365100
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||| ||||||||| ||||||||| ||||||   ||| |||||| |||||||||||| ||| ||||||| ||||||||||||||||||||||         
T  39365230 atactccctccgtcccataataactgagccatttaccaaaaaaaagtgtcccaaaataactgagccatttcaattttcaatacaatattaattac-tttt 39365132  T
Q  157 nnccccttataactctaattaatactactttc 188  Q
      ||| ||||||||||||||||||||| ||||    
T  39365131 tcccctttataactctaattaatactattttc 39365100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 43639624 - 43639553
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtgga 234  Q
    |||||||||||||||||||||||||| |||||||||||| | |||||| || ||||||||||||||||||||    
T  43639624 ttataactctaattaatactactttcacaacttccaattcaatatatttcactttgcatttatgatagtgga 43639553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 240
Target Start/End: Original strand, 54493851 - 54493984
Alignment:
Q  105 tcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgat 204  Q
    |||||||||||| ||| ||||||| |||||| |||||||||||||||       ||| ||||||||||||||||||||||||||   | |||||||| |     
T  54493851 tcccaaaataactgagccatttcacttttca-tacaatattaattactttttt-ccctttataactctaattaatactactttcatcatttccaatttaa 54493948  T
Q  205 tatattccattttgcatttatgatagtggagaatac 240  Q
    |||||| || ||| ||||||||||||||||||||||    
T  54493949 tatatttcactttacatttatgatagtggagaatac 54493984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 229
Target Start/End: Complemental strand, 21585615 - 21585452
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnncccctt 164  Q
    ||||| ||| |||||||||  |||||  || | |||||| |||||||||||| ||||||||||| ||| |||||||||||||||||        ||  ||    
T  21585615 tccgttccataataactgagtcattttcaataaaaaagtgtcccaaaataactgagtcatttcactttccaatacaatattaatta-ttttttcccaatt 21585517  T
Q  165 ataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||| ||||||| | |||||||||  | ||||||| ||||| |||||||||||    
T  21585516 ataactctaattaatattactttcaccacttccaatacaatatattctattttacatttatgata 21585452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 58 - 239
Target Start/End: Complemental strand, 26134915 - 26134735
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||||||||||||| |||||||||  |||||  || | |||||| | | |||||||  ||||||||||| |||||||||||  ||||| |||          
T  26134915 tactccttccgtcccataataactgactcattttcaataaaaaagtgttctaaaataagtgagtcatttcacttttcaatacatcattaactactttttt 26134816  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
     ||  ||||||||||||||| ||||||||||   ||| |||||| | |||||| || |||||||||||||||||||||||||    
T  26134815 -ccttttataactctaattagtactactttcatcactcccaattcaatatatttcactttgcatttatgatagtggagaata 26134735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 15280604 - 15280682
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaataca 241  Q
    ||||||| ||||||||||||||||||   ||| |||||| | ||||||||| ||| |||||||||||||||||||||||    
T  15280604 ttataaccctaattaatactactttcatcactcccaattcaatatattccactttccatttatgatagtggagaataca 15280682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 188
Target Start/End: Complemental strand, 38601018 - 38600889
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||| ||||||||| |||||||||  |||||| |||| |||| | | | |||||||  |||||||||||  |||||||||||||||||||||         
T  38601018 atactccctccgtcccataataactgagtcatttgcaaaaaaaaattgttctaaaataattgagtcatttcacctttcaatacaatattaattac--tct 38600921  T
Q  157 nnccccttataactctaattaatactactttc 188  Q
      ||  ||||||||||||||||||||||||||    
T  38600920 ttccatttataactctaattaatactactttc 38600889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 32023262 - 32023134
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattata 208  Q
    |||||||| ||||||||||| ||| |||||||||||||||||        ||| |||||||||||||||||| |||||||   |||  ||||| | ||||    
T  32023262 aaaataactgagtcatttcactttccaatacaatattaatta-tttttttccctttataactctaattaatattactttcatcactctcaattcaatata 32023164  T
Q  209 ttccattttgcatttatgatagtggagaat 238  Q
    ||| | ||||||||||| ||||||||||||    
T  32023163 ttcaactttgcatttataatagtggagaat 32023134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 238
Target Start/End: Original strand, 33994553 - 33994731
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnn 157  Q
    |||||| ||||||  | ||||||||| ||||||| | || |||| | ||| |||||||| ||||||||||| |||||||||||||||||| ||           
T  33994553 tactccctccgtcaaataataactgagccatttgcacaaaaaaa-tgtccaaaaataactgagtcatttcacttttcaatacaatattaaata-tttttt 33994650  T
Q  158 nccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
     ||| ||||||||||||||||||| ||||||   | |  || || | ||||||||| ||| ||||||||||||||||||||    
T  33994651 tccctttataactctaattaataccactttcatcattctcagttcaatatattccactttacatttatgatagtggagaat 33994731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 54845624 - 54845549
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||||||||||||||   ||||| |||| | ||||||||| ||||||||||||||| | ||||||    
T  54845624 ttataactctaattaatactactttcattacttctaattcaatatattccactttgcatttatgatactagagaat 54845549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 43640730 - 43640684
Alignment:
Q  105 tcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  43640730 tcccaaaataactgagtcatttcacttttcaatacaatattaattac 43640684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 151
Target Start/End: Original strand, 48744127 - 48744213
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||||| ||||||||| ||||||| |||| ||||   ||||||||||||  |||||||| | |||| |||||||||||||||||    
T  48744127 tccgtcccataataactgagccatttgcaaaaaaaaaaagtcccaaaataactaagtcattttactttttaatacaatattaattac 48744213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 5245347 - 5245489
Alignment:
Q  98 aaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttcc 197  Q
    |||||| | |||||||||  ||| ||||||| |||||||||||  |||||||||       ||| ||||||||||||||||||| ||||||   |||  |    
T  5245347 aaaagtgttccaaaataagtgagccatttcacttttcaatacatgattaattacattttt-ccctttataactctaattaataccactttcatcactctc 5245445  T
Q  198 aattgattatattccattttgcatttatgatagtggagaataca 241  Q
    |||| | ||||||||| |||| |||||||||| |||||||||||    
T  5245446 aattcaatatattccactttgtatttatgatattggagaataca 5245489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 37041981 - 37041905
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    ||||||||||||||||||||||||||   | |||||||| | |||||| || |||  ||||||||||||||||||||    
T  37041981 ttataactctaattaatactactttcatcatttccaattcaatatatttcactttatatttatgatagtggagaata 37041905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 32827412 - 32827337
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||||||||||||||   | ||| |||| | |||||| || ||| ||||||||||||||||||||    
T  32827412 ttataactctaattaatactactttcatcatttctaattcaatatatttcactttacatttatgatagtggagaat 32827337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 241
Target Start/End: Complemental strand, 39866759 - 39866583
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaa-gtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnncccct 163  Q
    ||||||||| || |||||| ||| ||| |||| |||| || | |||||||||  ||| ||||| | ||| | ||||||||||||||||       ||| |    
T  39866759 tccgtcccataacaactgagccaattgcaaaaaaaaaagtgttccaaaataattgagccattttactttcctatacaatattaattactttttc-ccctt 39866661  T
Q  164 tataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaataca 241  Q
    |||||||||||||||||| ||||||   |||  ||||| | | |||| || |||||||||||||||||||||||||||    
T  39866660 tataactctaattaataccactttcatcactcacaattcaatgtatttcactttgcatttatgatagtggagaataca 39866583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 51164898 - 51165017
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaa-tactactttcgcaacttccaattgattat 207  Q
    |||||||  ||||||||||| ||||||||||||||||||||||       ||| |||||||||||||||| |||||||||| | ||| | |||| | |||    
T  51164898 aaaataatcgagtcatttcacttttcaatacaatattaattac--tttttccctttataactctaattaagtactactttcactactccaaattcaatat 51164995  T
Q  208 attccattttgcatttatgata 229  Q
    |||| | ||| |||||||||||    
T  51164996 attctactttacatttatgata 51165017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 230
Target Start/End: Original strand, 52325176 - 52325243
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatag 230  Q
    |||||||||||||||||||||||||||  | |  ||||| | ||||||||| ||||||||||||||||    
T  52325176 ttataactctaattaatactactttcgtcattctcaattcaatatattccactttgcatttatgatag 52325243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 1334889 - 1334823
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| | ||| |||||| | ||||||| | ||| |||||||||||    
T  1334889 ttataactctaattaatactactttcaccactcccaattcaatatattctactttacatttatgata 1334823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 1923089 - 1923155
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||| |||||||||||||||||| | ||| |||||| | ||||||| | |||||||||||||||    
T  1923089 ttataacactaattaatactactttcaccactcccaattcaatatattctactttgcatttatgata 1923155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 9017694 - 9017787
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||| ||||||||||| |||||||||  || || | ||| |||| | ||| |||||||| ||||| ||||| ||||||||||||||||||||||    
T  9017694 atacttcttccgtcccataataactgagacaattattaaaaaaaa-tgtcctaaaataactgagtcgtttcacttttcaatacaatattaattac 9017787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 9218144 - 9218210
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||||||||||||||||||||||   |||  ||||| ||||||||| | |||||||||||||||    
T  9218144 ttataactctaattaatactactttcatcactctcaattcattatattctactttgcatttatgata 9218210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 238
Target Start/End: Original strand, 26832071 - 26832145
Alignment:
Q  164 tataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||||||||||||||||||||||   ||| |||||| | |||||| || |||||||||||| | |||||||||    
T  26832071 tataactctaattaatactactttcatcactaccaatttaatatatttcactttgcatttatggtggtggagaat 26832145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 151
Target Start/End: Original strand, 41031502 - 41031560
Alignment:
Q  93 aaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||| |||||| || ||||||||  ||||||||||| ||||||||||||||||||||||    
T  41031502 aaaaaaaaagtgtcgcaaaataattgagtcatttcacttttcaatacaatattaattac 41031560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 53051025 - 53051091
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| ||||| |||||| | ||||||  | ||| |||||||||||    
T  53051025 ttataactctaattaatactactttcacaactcccaattcaatatattatactttacatttatgata 53051091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 46194354 - 46194248
Alignment:
Q  122 catttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcat 221  Q
    ||||||| ||||||||||||||||||||||       ||  ||||||| |||||||||||||||||| | |||  ||||| | ||||||| | |||||||    
T  46194354 catttcacttttcaatacaatattaattactttttt-ccaattataacactaattaatactactttcaccactctcaattcaatatattctactttgcat 46194256  T
Q  222 ttatgata 229  Q
    ||||||||    
T  46194255 ttatgata 46194248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 12744708 - 12744800
Alignment:
Q  58 tactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaatta 150  Q
    |||||| ||||||||| ||||||||| ||||||   |||  ||||| ||||||||||   ||| ||||||| |||||||| ||||||||||||    
T  12744708 tactccctccgtcccataataactgagccattttctaaaacaaagtgtcccaaaatatttgagccatttcacttttcaatgcaatattaatta 12744800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 36097861 - 36097777
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaatt 149  Q
    |||||| || |||||||||  |||||| ||||  ||||| |||||||||| | ||| ||||||| |||||||| |||||||||||    
T  36097861 tccgtctcataataactgagtcatttgcaaaaacaaagtgtcccaaaatatctgagccatttcacttttcaatgcaatattaatt 36097777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 46786089 - 46786013
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    |||||||| || ||||||||||||||    || |||||| | |||||| || |||||||||||||||||||||||||    
T  46786089 ttataactttagttaatactactttcatcgctcccaattcaatatatttcactttgcatttatgatagtggagaata 46786013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 1772274 - 1772231
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||||| ||  ||||||||||||||||||||||||||||||    
T  1772274 caaaataactgaaccatttcatttttcaatacaatattaattac 1772231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 30261715 - 30261543
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||| || |||||| ||||||||| ||||||| |||| || | | |||||||| ||  ||  ||||||| |||||||||||||| |||||||         
T  30261715 atactccctctgtcccataataactgagccatttgcaaaaaaatattgtcccaaaaaaattgacccatttcacttttcaatacaataataattac-tttt 30261617  T
Q  157 nnccccttataactctaattaatactactttcgcaacttcc-aattgattatattccattttgcatttatgata 229  Q
      |   ||||||||||||||||||||||||||   ||| || |||| | ||||||||| ||| |||||||||||    
T  30261616 tcctaattataactctaattaatactactttcatcactcccaaattcaatatattccactttacatttatgata 30261543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 44219141 - 44219066
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||||||||| ||||   |||||||||| | ||||||| | |||| |||||||||| ||| ||||    
T  44219141 ttataactctaattaatactattttcattacttccaattcaatatattctactttgtatttatgataatggggaat 44219066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 50736101 - 50736148
Alignment:
Q  164 tataactctaattaatactactttcgcaacttccaattgattatattc 211  Q
    ||||||||||||||||||||||||| | |||||||||| | |||||||    
T  50736101 tataactctaattaatactactttcactacttccaattcaatatattc 50736148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 211
Target Start/End: Complemental strand, 50776754 - 50776707
Alignment:
Q  164 tataactctaattaatactactttcgcaacttccaattgattatattc 211  Q
    ||||||||||||||||||||||||| | |||||||||| | |||||||    
T  50776754 tataactctaattaatactactttcactacttccaattcaatatattc 50776707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 32977898 - 32977832
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| |||||  ||||| | ||||||| |  || |||||||||||    
T  32977898 ttataactctaattaatactactttcacaactctcaattcaatatattctaaattacatttatgata 32977832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 42547214 - 42547148
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||| ||||||||||||||||||||   ||| |||||| | |||||||  ||||||||||||||||    
T  42547214 ttatagctctaattaatactactttcatcactcccaattcaatatattctcttttgcatttatgata 42547148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 48409583 - 48409649
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| | ||| |||||| |  |||||| | ||| |||||||||||    
T  48409583 ttataactctaattaatactactttcaccactcccaattcaacatattctactttacatttatgata 48409649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 54458475 - 54458429
Alignment:
Q  105 tcccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||||||||| |||| |||| | ||||||||||||||||||||||    
T  54458475 tcccaaaataactgagtaattttacttttcaatacaatattaattac 54458429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 2868577 - 2868648
Alignment:
Q  167 aactctaattaatactactttcgcaacttccaatt-gattatattccattttgcatttatgatagtggagaat 238  Q
    |||||||||||||| |||||||   ||| |||||| |||| ||||||| ||||||||||||| ||||||||||    
T  2868577 aactctaattaatattactttcatcactcccaattcgatt-tattccactttgcatttatgacagtggagaat 2868648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 29361286 - 29361326
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaat 148  Q
    ||||||||| || ||||||||||||||||| ||||||||||    
T  29361286 caaaataaccgattcatttcatttttcaatgcaatattaat 29361326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 229
Target Start/End: Original strand, 230202 - 230321
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattat 207  Q
    ||||||||| ||||||||||| |||||||||||||||||||||         |  |||||||||||||||||| ||||||| |||||||||||| | |||    
T  230202 caaaataactgagtcatttcacttttcaatacaatattaattattttttt--cttttataactctaattaatattactttcacaacttccaattcaatat 230299  T
Q  208 attccattttgcatttatgata 229  Q
    ||||||||||||||||||||||    
T  230300 attccattttgcatttatgata 230321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 105 - 238
Target Start/End: Original strand, 229766 - 229897
Alignment:
Q  105 tcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgat 204  Q
    |||||||||||| |||| |||||| ||| |||||||||||||||||        ||| |||||||||||||||||||||||||| |||||||||||| |     
T  229766 tcccaaaataacagagttatttcacttt-caatacaatattaatta-ttttttcccctttataactctaattaatactactttcacaacttccaattcaa 229863  T
Q  205 tatattccattttgcatttatgatagtggagaat 238  Q
    ||||| ||| ||||||||||||||| ||||||||    
T  229864 tatataccactttgcatttatgataatggagaat 229897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 46536275 - 46536417
Alignment:
Q  98 aaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttcc 197  Q
    |||||| || ||||||||| ||||||||||| ||||||||||||||||||||||       || | |||||||||||||||||||||||||   |||       
T  46536275 aaaagtgtctcaaaataactgagtcatttcacttttcaatacaatattaattacatttttccctc-tataactctaattaatactactttcatcactctt 46536373  T
Q  198 aattgattatattccattttgcatttatgatagtggagaataca 241  Q
    |||| | ||||||||| |||| ||||||||||||||||||||||    
T  46536374 aatttaatatattccactttgtatttatgatagtggagaataca 46536417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 238
Target Start/End: Complemental strand, 19533127 - 19532953
Alignment:
Q  63 cttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnncccc 162  Q
    ||||||||||  |||||||||  |||||| |||| ||||  ||||||||||||| ||||||||| | ||||||||||||||||||||||       |||     
T  19533127 cttccgtcccgtaataactgagtcatttgcaaaaaaaaaaaatcccaaaataactgagtcattttacttttcaatacaatattaattac-ttttttccct 19533029  T
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||||| |||||||||||||||||   | || || || | |||||| || ||| ||||||||||||||||||||    
T  19533028 ttataactttaattaatactactttcatcatttacagttcaatatatttcactttacatttatgatagtggagaat 19532953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 238
Target Start/End: Original strand, 8773141 - 8773316
Alignment:
Q  66 ccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattac---nnnnnnncccc 162  Q
    |||||||| |||||||||  |||||| |||| |||||| |||||||||||| |||  |||||||||||||||| ||||||||||||          ||      
T  8773141 ccgtcccataataactgagtcatttgcaaaaaaaaagtgtcccaaaataactgagctatttcatttttcaatagaatattaattacttttttttttcctt 8773240  T
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||||||||||||||   ||||| | || | ||||||||| ||||||| ||||| ||||||||||    
T  8773241 ttataactctaattaatactactttcatcacttctagtttaatatattccactttgcatatatgacagtggagaat 8773316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 5442339 - 5442414
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||||| ||||||||| ||||||| |||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  5442339 ttataactataattaatattactttcacaacttccaattcaatatattccactttgcatttatgatagtggagaat 5442414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 98 - 239
Target Start/End: Original strand, 8327652 - 8327792
Alignment:
Q  98 aaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttcc 197  Q
    |||||| |||||||||||  ||| ||||||| |||||||||||  |||||||||       ||| ||||||||||||||||||||||||||   |||  |    
T  8327652 aaaagtgtcccaaaataaatgagccatttcacttttcaatacatcattaattactttttt-ccctttataactctaattaatactactttcatcactctc 8327750  T
Q  198 aattgattatattccattttgcatttatgatagtggagaata 239  Q
    |||| | |||||||||||||||||||||||||| ||||||||    
T  8327751 aattcaatatattccattttgcatttatgataggggagaata 8327792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 239
Target Start/End: Complemental strand, 3555760 - 3555588
Alignment:
Q  65 tccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnncccctt 164  Q
    ||||||||| |||||||||  ||||| ||| | |||||| |||||||||||  |||| ||||||||||||| ||||  |||||||||       ||  ||    
T  3555760 tccgtcccataataactgagtcatttttaata-aaaagtgtcccaaaataagtgagttatttcatttttcattacatcattaattactttttt-cctttt 3555663  T
Q  165 ataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    ||||||||||||||||||||||||     | |||||| | ||||||||| |||||||||||||||||||||||||    
T  3555662 ataactctaattaatactactttcatctatcccaattcaatatattccactttgcatttatgatagtggagaata 3555588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 229
Target Start/End: Complemental strand, 11426084 - 11425912
Alignment:
Q  56 tatactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnn 155  Q
    |||||||||||||||||| |||| | || ||||||  || | |||||| ||| |||||||| ||||||||||| ||| ||||||||||||||||||        
T  11426084 tatactccttccgtcccataataccggagccattttcaataaaaaagtgtcctaaaataactgagtcatttcactttccaatacaatattaattactttt 11425985  T
Q  156 nnnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
        |  |||||||| ||||||||||||||||| | |||||||||  | ||||||| | ||| |||||||||||    
T  11425984 ttt-caattataactttaattaatactactttcactacttccaatacaatatattctactttacatttatgata 11425912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 98 - 239
Target Start/End: Original strand, 28839275 - 28839414
Alignment:
Q  98 aaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttcc 197  Q
    |||||| | |||||||||  ||||||||||| |||||||||||   ||||||||       ||| |||||||| |||||||||||||||||   ||| ||    
T  28839275 aaaagtgttccaaaataagtgagtcatttcacttttcaatacatatttaattacttttt--ccctttataactataattaatactactttcatcactccc 28839372  T
Q  198 aattgattatattccattttgcatttatgatagtggagaata 239  Q
    |||| | ||||||||| |||||||||||||||||||||||||    
T  28839373 aattcaatatattccactttgcatttatgatagtggagaata 28839414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 234
Target Start/End: Original strand, 36784259 - 36784384
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattat 207  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||        |  |||||||| ||||||||| || |||| ||||||| |||| | |||    
T  36784259 caaaataactgagtcatttcacttttcaatacaatattaattacttttttt-catttataactataattaatattattttcacaacttcaaattcaatat 36784357  T
Q  208 attccattttgcatttatgatagtgga 234  Q
    ||| || ||||||||||||||||||||    
T  36784358 atttcactttgcatttatgatagtgga 36784384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 57 - 238
Target Start/End: Complemental strand, 17724928 - 17724748
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||| || ||| || |||||||||  ||||| ||| | |||||| || ||||||||  |||||||||||||||||||||||||||||||||          
T  17724928 atactccatctgtctcataataactgagtcatttctaataaaaaagtgtctcaaaataattgagtcatttcatttttcaatacaatattaatta-tttta 17724830  T
Q  157 nnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
      |   ||||||||||||||||||||| ||||   ||| |||||| | || |||| | |||||||||||| |||||||||||    
T  17724829 atctttttataactctaattaatactattttcatcactcccaattcaataaattctactttgcatttatggtagtggagaat 17724748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 98 - 242
Target Start/End: Original strand, 46495953 - 46496096
Alignment:
Q  98 aaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttcc 197  Q
    |||||| || ||||||||  |||||||||||||||||||||||  ||||||||        ||  ||||||||||||||||||||||||||   ||  |     
T  46495953 aaaagtgtctcaaaataagtgagtcatttcatttttcaatacatcattaattattttttttcct-ttataactctaattaatactactttcatcacgcct 46496051  T
Q  198 aattgattatattccattttgcatttatgatagtggagaatacat 242  Q
    |||| | ||||||||| ||||||||||||||| ||||||||||||    
T  46496052 aattcaatatattccactttgcatttatgataatggagaatacat 46496096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 2219613 - 2219491
Alignment:
Q  105 tcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgat 204  Q
    |||||||||||  ||  ||||||| ||||||||||||||||||||||       ||| |||||||||||||||||||||| ||| |||||||||||| |     
T  2219613 tcccaaaataattgaaccatttcacttttcaatacaatattaattacttttt--ccctttataactctaattaatactacgttcacaacttccaattcaa 2219516  T
Q  205 tatattccattttgcatttatgata 229  Q
    ||||||  | ||| |||||||||||    
T  2219515 tatattttactttacatttatgata 2219491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 238
Target Start/End: Complemental strand, 36467390 - 36467229
Alignment:
Q  75 aataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaa 174  Q
    |||||||||  |||||| |||| |||||| |  |||||| || ||||||||||| ||||||||||||||||||||||       ||| ||||||||| ||    
T  36467390 aataactgagtcatttgcaaaa-aaaagtgtttcaaaatgactgagtcatttcacttttcaatacaatattaattac-tttttcccctttataactcaaa 36467293  T
Q  175 ttaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||| ||||   | |||||||| | |||||| || ||| ||||||| ||||||||||||    
T  36467292 ttaatactattttcatcatttccaattcaatatatttcactttacatttatcatagtggagaat 36467229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 239
Target Start/End: Complemental strand, 51749345 - 51749216
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattata 208  Q
    |||||||  ||||||||||||||||||||| |  ||||||||        ||| |||||||||||||||||| |||||||   ||| |||||| | ||||    
T  51749345 aaaataagtgagtcatttcatttttcaatatatcattaatta-tttttttccctttataactctaattaatattactttcatcactcccaattcaatata 51749247  T
Q  209 ttccattttgcatttatgatagtggagaata 239  Q
    ||||| ||||||||||||||| |||||||||    
T  51749246 ttccactttgcatttatgataatggagaata 51749216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 238
Target Start/End: Complemental strand, 7785439 - 7785308
Alignment:
Q  105 tcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgat 204  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||        ||| |||||||||||||||||||||||||     ||  ||||| |     
T  7785439 tcccataataactgagtcatttcacttttcaatacaatattaatta--ttttttccctttataactctaattaatactacttttatcgctctcaattcaa 7785342  T
Q  205 tatattccattttgcatttatgatagtggagaat 238  Q
    |||||| || ||| ||||||||||||||||||||    
T  7785341 tatatttcactttacatttatgatagtggagaat 7785308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 238
Target Start/End: Complemental strand, 49494348 - 49494197
Alignment:
Q  85 ccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactac 184  Q
    ||||||| ||||  ||||| || ||||||||  ||||||||||| ||||||||||| ||||||||||        || |||||||| ||||||||| |||    
T  49494348 ccatttgcaaaaataaagtgtctcaaaataatcgagtcatttcacttttcaatacactattaattactttttt--cctttataactttaattaatattac 49494251  T
Q  185 tttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||   | ||| |||| | ||||||||| ||| ||||||||||||||||||||    
T  49494250 tttcatcatttctaattcaatatattccactttacatttatgatagtggagaat 49494197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 28277200 - 28277072
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattata 208  Q
    |||||||| |||||||||||||||| |||||||||||||||||       | | ||||||||||||||||||| ||||||   | || ||||| | ||||    
T  28277200 aaaataactgagtcatttcattttttaatacaatattaattac-ttttttctctttataactctaattaataccactttcatcattttcaattcaatata 28277102  T
Q  209 ttccattttgcatttatgatagtggagaat 238  Q
    || || ||| ||||||||||| ||||||||    
T  28277101 tttcactttacatttatgatactggagaat 28277072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 98 - 229
Target Start/End: Complemental strand, 4466327 - 4466197
Alignment:
Q  98 aaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttcc 197  Q
    |||||| || ||||||||  ||||||||||| ||| |||||||||||||||||        ||  |||||||||||||||||||||||||| | ||||||    
T  4466327 aaaagtgtctcaaaataattgagtcatttcactttccaatacaatattaatta-tttttttccaattataactctaattaatactactttcaccacttcc 4466229  T
Q  198 aattgattatattccattttgcatttatgata 229  Q
    |||  | ||||||| | ||| |||||||||||    
T  4466228 aatacaatatattctactttacatttatgata 4466197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 188
Target Start/End: Original strand, 27698742 - 27698836
Alignment:
Q  93 aaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttc 188  Q
    |||| |||||| ||| |||||||  ||||||||||| ||||||||||||||||||||||       ||| |||||||||||||||||| |||||||    
T  27698742 aaaaaaaaagtgtcctaaaataattgagtcatttcacttttcaatacaatattaattac-ttttttccctttataactctaattaatattactttc 27698836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 238
Target Start/End: Original strand, 38664330 - 38664475
Alignment:
Q  92 taaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgca 191  Q
    ||||| |||||| || ||||||||  ||||||||| |||||| ||||||||||||||||        |   ||||||||||||||||||||||||||       
T  38664330 taaaaaaaaagtgtctcaaaataattgagtcattttattttttaatacaatattaatta-tttttttctttttataactctaattaatactactttcatc 38664428  T
Q  192 acttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    | | | |||| | ||||||| ||||||||||||||||||| ||||||    
T  38664429 attcctaattcaatatattcaattttgcatttatgatagtagagaat 38664475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 13500838 - 13500763
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||| |||||||||||||||||||   ||| |||||| | ||| ||||| |||||||||||||||||| |||||    
T  13500838 ttataattctaattaatactactttcagcactcccaattcaatattttccactttgcatttatgatagtgaagaat 13500763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 229
Target Start/End: Complemental strand, 29756293 - 29756185
Alignment:
Q  122 catttcatttttcaatacaatattaattacnnnnnnncccc-ttataactctaattaatactactttcgcaacttccaattgattatattccattttgca 220  Q
    ||||||| ||||||||||||||||||||||        ||  ||||||| |||||||||||||||||| | ||| |||||| | ||||||| | ||||||    
T  29756293 catttcacttttcaatacaatattaattacttttttttccaattataacactaattaatactactttcaccactcccaattcaatatattctactttgca 29756194  T
Q  221 tttatgata 229  Q
    |||||||||    
T  29756193 tttatgata 29756185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 52830575 - 52830452
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattata 208  Q
    |||||||| ||||||||||| ||||||||||||||||||||||       | | |||||| | |||||| || |||||||   | |||||||||| ||||    
T  52830575 aaaataactgagtcatttcacttttcaatacaatattaattac-ttttttctctttataattttaattagtattactttcatca-ttccaattgaatata 52830478  T
Q  209 ttccattttgcatttatgatagtgga 234  Q
    ||||| ||| ||||||||||||||||    
T  52830477 ttccactttacatttatgatagtgga 52830452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 948695 - 948621
Alignment:
Q  164 tataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||||||||  |||   ||||  |||| | ||||||||| ||||||||||||||||||||||||    
T  948695 tataactctaattaatactatcttcatcactttgaattcaatatattccactttgcatttatgatagtggagaat 948621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 2886065 - 2886236
Alignment:
Q  57 atactccttccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnn 156  Q
    ||||||| ||||||||| |||||||||  |||||| |||| || | | ||||| || ||  ||   |||||| ||||||||||||||||||||||         
T  2886065 atactccctccgtcccataataactgagtcatttgcaaaaaaatattgtcccagaaaaattgatcaatttcacttttcaatacaatattaattacttttt 2886164  T
Q  157 nnccccttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
      ||  ||||||| |||||||||||||||||| | |||  ||||| | ||||||| | |||||||||||||||    
T  2886165 t-ccaattataacactaattaatactactttcaccactctcaattcaatatattctactttgcatttatgata 2886236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 12267740 - 12267674
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||||||| |||||||||||||| ||||| |||||| | ||||||| | ||| |||||||||||    
T  12267740 ttataactctagttaatactactttcacaactcccaattcaatatattctactttacatttatgata 12267674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 238
Target Start/End: Original strand, 17342764 - 17342902
Alignment:
Q  99 aaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttcca 198  Q
    ||||| || ||||||||| |||| |||||| ||||||||||||||||||||||         | |||||||||||||||||||||||||    |||  ||    
T  17342764 aaagtgtctcaaaataactgagttatttcacttttcaatacaatattaattactattttt-tcattataactctaattaatactacttttatcactctca 17342862  T
Q  199 attgattatattccattttgcatttatgatagtggagaat 238  Q
    ||| | |||||| || |||| |||||||||| ||||||||    
T  17342863 attcaatatatttcactttgtatttatgataatggagaat 17342902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 19349103 - 19349037
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||| ||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||    
T  19349103 ttataaccctaattaatactactttcaaaactctcaattcaatatattctattttgcatttatgata 19349037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 29225752 - 29225818
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||||||||||||||||||||||||||   ||| |||||| | ||||||| | |||||||||||||||    
T  29225752 ttataactctaattaatactactttcatcactcccaattcaatatattctactttgcatttatgata 29225818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 229
Target Start/End: Complemental strand, 24131604 - 24131443
Alignment:
Q  67 cgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttat 166  Q
    ||||||| |||||||||  ||||||||||| |||  | ||||| || ||  || | |||||| |||||||| |||||||||||||       ||  ||||    
T  24131604 cgtcccataataactgagtcatttgtaaaaaaaatatgtcccagaaaaattgacttatttcacttttcaatgcaatattaattactttttt-ccaattat 24131506  T
Q  167 aactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    ||| |||||||||||||||||| | ||| |||||| | ||||||  | |||||||||||||||    
T  24131505 aacactaattaatactactttcaccactcccaattcaatatattatactttgcatttatgata 24131443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 10587690 - 10587615
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||| ||||||||||||||||||   |||  ||||| | ||||||| ||||||||||||||||| || |||||    
T  10587690 ttataacactaattaatactactttcatcactctcaattcaatatattctattttgcatttatgataatgaagaat 10587615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 109 - 229
Target Start/End: Original strand, 16040023 - 16040142
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaattgattata 208  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||        |  |||||||||||| ||||| ||||||| | |||||||||  | ||||    
T  16040023 aaaataactgagtcatttcactttccaatacaatattaattacttttttt-caattataactctaaataatattactttcaccacttccaatacaatata 16040121  T
Q  209 ttccattttgcatttatgata 229  Q
    ||| | ||| |||||||||||    
T  16040122 ttctactttacatttatgata 16040142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 26755975 - 26756050
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||||||||||||||   | || ||||| | |||||| || |||  |||||||||||||||||||    
T  26755975 ttataactctaattaatactactttcatcattttcaattcaatatattacactttatatttatgatagtggagaat 26756050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 151
Target Start/End: Original strand, 43895792 - 43895835
Alignment:
Q  108 caaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    ||||||||  ||||||||||| ||||||||||||||||||||||    
T  43895792 caaaataaatgagtcatttcacttttcaatacaatattaattac 43895835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 7787623 - 7787665
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||||| ||| ||||||||||||| ||||||||||||||||    
T  7787623 aaaataactgagccatttcatttttcgatacaatattaattac 7787665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 27831850 - 27831920
Alignment:
Q  168 actctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    |||||||||||||||||||||   ||| |||||| | ||| ||||| ||||||||||||||| ||| ||||    
T  27831850 actctaattaatactactttcatcactcccaattcaatatcttccactttgcatttatgataatggtgaat 27831920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 35622888 - 35622826
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttat 225  Q
    ||||||||||||||||||||||||||  || | |||||| | ||||||| | |||||||||||    
T  35622888 ttataactctaattaatactactttcataattgccaattcaatatattctactttgcatttat 35622826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 229
Target Start/End: Complemental strand, 36232898 - 36232832
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgata 229  Q
    |||||||||||||||||||||||||| | | |||||||| | ||||||| | |||  ||||||||||    
T  36232898 ttataactctaattaatactactttcaccatttccaattcaatatattctactttatatttatgata 36232832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 37495730 - 37495812
Alignment:
Q  68 gtcccacaataactgatccatttgtaaaagaaaag-tatcccaaaataacggagtcatttcatttttcaatacaatattaatt 149  Q
    |||||| |||||||||  ||||||||||| ||||  ||||| |||||||  ||||||||| | ||||| ||||||||||||||    
T  37495730 gtcccataataactgagtcatttgtaaaaaaaaaaatatcctaaaataattgagtcattttacttttctatacaatattaatt 37495812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 151
Target Start/End: Original strand, 49944737 - 49944779
Alignment:
Q  109 aaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||||| |||||||||||  |||||||||||||||||||||    
T  49944737 aaaataaccgagtcatttcacctttcaatacaatattaattac 49944779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 42926175 - 42926208
Alignment:
Q  205 tatattccattttgcatttatgatagtggagaat 238  Q
    |||||| |||||||||||||||||||||||||||    
T  42926175 tatatttcattttgcatttatgatagtggagaat 42926208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 48242751 - 48242710
Alignment:
Q  110 aaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||||  |||||||||| ||||||||||||||||||||||    
T  48242751 aaataacttagtcatttcacttttcaatacaatattaattac 48242710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 228
Target Start/End: Complemental strand, 52146764 - 52146699
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgat 228  Q
    |||||||||||||||||||||||||| |||||  |||||    |||||| | ||||||||||||||    
T  52146764 ttataactctaattaatactactttcacaactctcaattcgacatattctactttgcatttatgat 52146699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 6784947 - 6784991
Alignment:
Q  107 ccaaaataacggagtcatttcatttttcaatacaatattaattac 151  Q
    |||||||||  || |||||||| ||||||||||||||||||||||    
T  6784947 ccaaaataattgaatcatttcacttttcaatacaatattaattac 6784991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 151
Target Start/End: Original strand, 14090602 - 14090630
Alignment:
Q  123 atttcatttttcaatacaatattaattac 151  Q
    |||||||||||||||||||||||||||||    
T  14090602 atttcatttttcaatacaatattaattac 14090630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 151
Target Start/End: Original strand, 30749715 - 30749743
Alignment:
Q  123 atttcatttttcaatacaatattaattac 151  Q
    |||||||||||||||||||||||||||||    
T  30749715 atttcatttttcaatacaatattaattac 30749743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 151
Target Start/End: Original strand, 30771166 - 30771194
Alignment:
Q  123 atttcatttttcaatacaatattaattac 151  Q
    |||||||||||||||||||||||||||||    
T  30771166 atttcatttttcaatacaatattaattac 30771194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 231
Target Start/End: Original strand, 52432311 - 52432379
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagt 231  Q
    |||||||||||||||||  ||||||| |||||| ||||| | |||||| || ||| |||||||| ||||    
T  52432311 ttataactctaattaatgttactttcacaacttacaattcaatatatttcactttacatttatggtagt 52432379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 242
Target Start/End: Complemental strand, 9718 - 9581
Alignment:
Q  101 agtatcccaaaataacggagtcatttcatttttcaatacaatattaattacnnnnnnnccccttataactctaattaatactactttcgcaacttccaat 200  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||||||       ||| ||||||||||||||||||||||||||   |||  ||||    
T  9718 agtatcccaaaataacagagtaatttcacttttcaatacaatattaattac-tattttccctttataactctaattaatactactttcatcactctcaat 9620  T
Q  201 tgattatattccattttgcatttatgatagtggagaatacat 242  Q
       | |||||||| ||||||||||||||| ||||||||||||    
T  9619 ---tcatattccactttgcatttatgataatggagaatacat 9581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 26612 - 26688
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    |||||| |||||||||||||||||||   |||  ||||| | ||||||||| |||||||||||||||||||||||||    
T  26612 ttataattctaattaatactactttcatcactcgcaattcaatatattccactttgcatttatgatagtggagaata 26688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 97962 - 98043
Alignment:
Q  66 ccgtcccacaataactgatccatttgtaaaagaaaagtatcccaaaataacggagtcatttcatttttcaatacaatattaa 147  Q
    |||||||| |||||||||  |||||| |||| | |||| || ||||||||| ||||||||||| ||||||||| ||||||||    
T  97962 ccgtcccataataactgagtcatttgcaaaaaataagtgtctcaaaataaccgagtcatttcacttttcaatataatattaa 98043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 14455 - 14530
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaat 238  Q
    ||||||||||||||||||||||||||   | || ||||| | ||||||||| ||| ||||||||| ||||||||||    
T  14455 ttataactctaattaatactactttcatcattttcaattcaatatattccactttacatttatgacagtggagaat 14530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 239
Target Start/End: Original strand, 394777 - 394853
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtggagaata 239  Q
    ||||||||||||||||||||||||||   |||  ||||| | ||||||||| |||| ||||||||||| | ||||||    
T  394777 ttataactctaattaatactactttcatcactctcaattcactatattccactttgtatttatgatagagaagaata 394853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 26321 - 26392
Alignment:
Q  163 ttataactctaattaatactactttcgcaacttccaattgattatattccattttgcatttatgatagtgga 234  Q
    |||||||||||||||||| ||||||    | |||||||| | ||||||||| ||| ||||||||||||||||    
T  26321 ttataactctaattaatattacttttatcatttccaattcaatatattccactttacatttatgatagtgga 26392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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