View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20539_low_51 (Length: 292)

Name: NF20539_low_51
Description: NF20539
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20539_low_51
NF20539_low_51
[»] chr8 (63 HSPs)
chr8 (1-168)||(31132932-31133099)
chr8 (55-168)||(27752677-27752792)
chr8 (55-168)||(35260148-35260263)
chr8 (55-167)||(11044149-11044263)
chr8 (55-168)||(27621221-27621336)
chr8 (55-167)||(11992820-11992934)
chr8 (55-168)||(35344458-35344574)
chr8 (55-168)||(3100044-3100159)
chr8 (55-168)||(37598160-37598275)
chr8 (55-168)||(44411164-44411279)
chr8 (61-163)||(44052717-44052821)
chr8 (55-168)||(25321541-25321656)
chr8 (55-168)||(24612432-24612550)
chr8 (54-168)||(39187324-39187437)
chr8 (55-163)||(34713624-34713734)
chr8 (54-168)||(35346259-35346374)
chr8 (55-168)||(32678472-32678579)
chr8 (55-167)||(12108247-12108362)
chr8 (81-168)||(36538149-36538236)
chr8 (236-292)||(31133167-31133223)
chr8 (55-168)||(2238550-2238663)
chr8 (236-288)||(27621101-27621153)
chr8 (238-288)||(35260028-35260078)
chr8 (62-168)||(41426430-41426538)
chr8 (236-285)||(44358629-44358678)
chr8 (236-284)||(3099928-3099976)
chr8 (236-284)||(11992703-11992751)
chr8 (236-288)||(25321724-25321776)
chr8 (236-288)||(27752557-27752609)
chr8 (236-288)||(32678647-32678699)
chr8 (236-288)||(33851161-33851213)
chr8 (236-288)||(36538029-36538081)
chr8 (116-168)||(37567449-37567501)
chr8 (236-288)||(37567569-37567621)
chr8 (236-288)||(37598041-37598093)
chr8 (236-288)||(39187204-39187256)
chr8 (236-284)||(44052596-44052644)
chr8 (56-120)||(37566453-37566519)
chr8 (55-168)||(24510652-24510765)
chr8 (236-288)||(24612618-24612670)
chr8 (236-288)||(35346442-35346494)
chr8 (236-284)||(44411347-44411395)
chr8 (81-168)||(29920251-29920338)
chr8 (111-165)||(40486505-40486559)
chr8 (54-168)||(2052953-2053069)
chr8 (236-288)||(11044028-11044080)
chr8 (116-168)||(33851041-33851093)
chr8 (236-276)||(34713511-34713551)
chr8 (115-163)||(44358508-44358556)
chr8 (236-283)||(40487803-40487850)
chr8 (54-163)||(34890127-34890239)
chr8 (55-163)||(26483627-26483736)
chr8 (236-288)||(35344337-35344390)
chr8 (239-286)||(2238734-2238781)
chr8 (55-113)||(13144268-13144326)
chr8 (236-284)||(12108145-12108192)
chr8 (55-111)||(24892988-24893044)
chr8 (238-284)||(16643224-16643270)
chr8 (55-146)||(27740715-27740808)
chr8 (93-163)||(34900020-34900090)
chr8 (236-273)||(41426325-41426362)
chr8 (236-288)||(24510833-24510885)
chr8 (240-288)||(41362449-41362496)
[»] chr4 (60 HSPs)
chr4 (46-168)||(30776395-30776519)
chr4 (55-168)||(39969909-39970024)
chr4 (55-166)||(29180332-29180445)
chr4 (55-168)||(10591423-10591538)
chr4 (54-168)||(30777572-30777689)
chr4 (55-168)||(37788536-37788651)
chr4 (52-168)||(29899800-29899918)
chr4 (59-166)||(53677403-53677512)
chr4 (55-168)||(28681744-28681859)
chr4 (58-167)||(43980584-43980695)
chr4 (55-168)||(50768530-50768645)
chr4 (54-168)||(55937622-55937738)
chr4 (55-168)||(3043087-3043202)
chr4 (55-168)||(9797995-9798110)
chr4 (61-168)||(47807280-47807388)
chr4 (55-167)||(51495235-51495348)
chr4 (86-166)||(38940956-38941036)
chr4 (55-167)||(38187648-38187760)
chr4 (68-167)||(49902113-49902214)
chr4 (70-168)||(32012261-32012362)
chr4 (55-166)||(5222212-5222326)
chr4 (55-167)||(1620115-1620230)
chr4 (88-168)||(52713140-52713220)
chr4 (236-288)||(3043270-3043322)
chr4 (236-288)||(10591606-10591658)
chr4 (236-288)||(38940834-38940886)
chr4 (236-288)||(52713028-52713080)
chr4 (236-288)||(53677582-53677634)
chr4 (237-288)||(9798179-9798230)
chr4 (236-288)||(29899680-29899732)
chr4 (236-288)||(32012430-32012482)
chr4 (236-288)||(37788416-37788468)
chr4 (236-288)||(39970092-39970144)
chr4 (236-284)||(43980467-43980515)
chr4 (236-288)||(47807160-47807212)
chr4 (236-288)||(49901992-49902044)
chr4 (236-288)||(50768410-50768462)
chr4 (236-288)||(51495114-51495166)
chr4 (241-288)||(55937811-55937858)
chr4 (55-168)||(30011873-30011989)
chr4 (236-288)||(27750451-27750503)
chr4 (236-288)||(29180515-29180567)
chr4 (236-288)||(30776587-30776639)
chr4 (236-288)||(30777452-30777504)
chr4 (236-288)||(38187829-38187881)
chr4 (236-284)||(1619998-1620046)
chr4 (54-163)||(47867974-47868085)
chr4 (54-163)||(5064606-5064712)
chr4 (99-166)||(17236262-17236329)
chr4 (55-109)||(51495372-51495427)
chr4 (55-163)||(2229342-2229452)
chr4 (98-168)||(27750313-27750383)
chr4 (55-113)||(48793577-48793637)
chr4 (55-163)||(4058810-4058917)
chr4 (61-163)||(20281686-20281787)
chr4 (55-163)||(39078251-39078361)
chr4 (236-273)||(5222396-5222433)
chr4 (240-288)||(23978249-23978296)
chr4 (240-288)||(28142755-28142802)
chr4 (236-288)||(38140842-38140894)
[»] chr2 (64 HSPs)
chr2 (54-168)||(792308-792424)
chr2 (55-168)||(14565326-14565441)
chr2 (55-168)||(21539845-21539960)
chr2 (55-168)||(4092099-4092214)
chr2 (55-168)||(10979257-10979372)
chr2 (55-168)||(35832500-35832615)
chr2 (55-168)||(10478266-10478381)
chr2 (55-168)||(38549596-38549711)
chr2 (55-168)||(43451593-43451708)
chr2 (55-168)||(44803986-44804101)
chr2 (55-163)||(38071403-38071513)
chr2 (54-167)||(29513972-29514086)
chr2 (55-168)||(43075838-43075952)
chr2 (55-167)||(29514428-29514542)
chr2 (55-153)||(15858642-15858742)
chr2 (66-168)||(28492608-28492712)
chr2 (55-168)||(33635424-33635539)
chr2 (55-168)||(8784483-8784599)
chr2 (53-168)||(28424359-28424478)
chr2 (57-167)||(5091495-5091607)
chr2 (55-139)||(38564670-38564756)
chr2 (55-168)||(18833862-18833978)
chr2 (103-168)||(4033678-4033743)
chr2 (237-288)||(28424242-28424293)
chr2 (236-288)||(792492-792544)
chr2 (236-288)||(15858746-15858798)
chr2 (236-288)||(21539725-21539777)
chr2 (236-288)||(22162288-22162340)
chr2 (236-288)||(35832380-35832432)
chr2 (236-288)||(43075718-43075770)
chr2 (64-167)||(13822729-13822837)
chr2 (236-288)||(4033811-4033863)
chr2 (236-284)||(5091676-5091724)
chr2 (236-288)||(8784363-8784415)
chr2 (236-284)||(14565509-14565557)
chr2 (55-166)||(15068825-15068939)
chr2 (236-284)||(28492492-28492540)
chr2 (236-288)||(29514155-29514207)
chr2 (236-288)||(29514611-29514663)
chr2 (236-288)||(33635304-33635356)
chr2 (236-288)||(38549779-38549831)
chr2 (236-284)||(10478150-10478198)
chr2 (55-168)||(29523994-29524109)
chr2 (236-288)||(43451473-43451525)
chr2 (236-283)||(38071574-38071621)
chr2 (55-168)||(8701694-8701808)
chr2 (236-284)||(4091983-4092031)
chr2 (61-163)||(33932883-33932986)
chr2 (55-163)||(35517220-35517330)
chr2 (54-168)||(40808669-40808788)
chr2 (236-283)||(44803871-44803918)
chr2 (55-168)||(9294743-9294859)
chr2 (236-273)||(15068718-15068755)
chr2 (92-168)||(7645219-7645295)
chr2 (236-288)||(9294623-9294675)
chr2 (249-288)||(10979159-10979198)
chr2 (52-86)||(6110145-6110179)
chr2 (89-163)||(32010199-32010273)
chr2 (55-163)||(3201423-3201534)
chr2 (55-159)||(6765887-6765992)
chr2 (92-168)||(9864710-9864787)
chr2 (55-110)||(12872234-12872286)
chr2 (89-146)||(35023012-35023069)
chr2 (236-288)||(13822906-13822958)
[»] chr1 (73 HSPs)
chr1 (55-168)||(23873784-23873899)
chr1 (55-168)||(25990836-25990951)
chr1 (55-168)||(26907048-26907163)
chr1 (55-168)||(46949409-46949524)
chr1 (54-168)||(28916472-28916587)
chr1 (55-167)||(18913301-18913416)
chr1 (55-168)||(40935570-40935685)
chr1 (55-168)||(43655994-43656109)
chr1 (55-168)||(49924507-49924622)
chr1 (55-167)||(29488837-29488951)
chr1 (54-168)||(31970265-31970381)
chr1 (55-168)||(40220144-40220262)
chr1 (54-168)||(44875267-44875383)
chr1 (55-168)||(18852311-18852426)
chr1 (55-168)||(40960431-40960546)
chr1 (55-167)||(18036633-18036747)
chr1 (55-168)||(38942397-38942513)
chr1 (55-168)||(15285891-15286005)
chr1 (55-168)||(39026202-39026318)
chr1 (55-168)||(28017746-28017859)
chr1 (55-168)||(15311265-15311380)
chr1 (60-168)||(35941929-35942039)
chr1 (58-168)||(45357835-45357948)
chr1 (55-168)||(9128131-9128246)
chr1 (60-168)||(35189289-35189400)
chr1 (55-168)||(26479827-26479943)
chr1 (55-168)||(6848267-6848381)
chr1 (72-163)||(47997047-47997140)
chr1 (55-132)||(4529300-4529378)
chr1 (236-288)||(23873967-23874019)
chr1 (236-288)||(25990716-25990768)
chr1 (236-288)||(28017626-28017678)
chr1 (236-288)||(43656177-43656229)
chr1 (236-288)||(44875147-44875199)
chr1 (236-288)||(15285772-15285824)
chr1 (236-288)||(18036512-18036564)
chr1 (236-288)||(18913486-18913538)
chr1 (236-288)||(28916655-28916707)
chr1 (237-288)||(46949289-46949340)
chr1 (237-288)||(47996922-47996973)
chr1 (241-288)||(49924387-49924434)
chr1 (86-148)||(35884319-35884381)
chr1 (236-288)||(4529155-4529207)
chr1 (236-288)||(18852191-18852243)
chr1 (236-288)||(26907229-26907281)
chr1 (236-288)||(31970449-31970501)
chr1 (236-288)||(35941809-35941861)
chr1 (55-168)||(36384016-36384131)
chr1 (236-288)||(38942581-38942633)
chr1 (236-288)||(40220025-40220076)
chr1 (236-288)||(40935753-40935805)
chr1 (236-288)||(40960614-40960666)
chr1 (55-134)||(36037359-36037440)
chr1 (236-284)||(6848446-6848494)
chr1 (236-284)||(9128015-9128063)
chr1 (236-284)||(26479711-26479759)
chr1 (236-288)||(29488716-29488768)
chr1 (236-288)||(39026386-39026438)
chr1 (245-288)||(45358025-45358068)
chr1 (242-288)||(15311146-15311192)
chr1 (55-163)||(24190566-24190675)
chr1 (55-163)||(15959596-15959704)
chr1 (55-168)||(44148790-44148905)
chr1 (55-113)||(24728580-24728640)
chr1 (92-165)||(52985028-52985101)
chr1 (236-284)||(35189173-35189221)
chr1 (55-163)||(43667259-43667367)
chr1 (55-109)||(3874974-3875029)
chr1 (55-156)||(32983127-32983229)
chr1 (236-288)||(36383896-36383948)
chr1 (240-288)||(25185445-25185492)
chr1 (54-86)||(25185577-25185609)
chr1 (54-110)||(39150811-39150866)
[»] chr7 (75 HSPs)
chr7 (54-168)||(35181279-35181395)
chr7 (55-168)||(18206231-18206346)
chr7 (55-168)||(43107817-43107932)
chr7 (55-168)||(19932967-19933082)
chr7 (54-168)||(42617758-42617875)
chr7 (55-168)||(3157523-3157638)
chr7 (55-168)||(23106540-23106655)
chr7 (54-168)||(41889258-41889374)
chr7 (55-168)||(21654033-21654148)
chr7 (55-168)||(9818555-9818670)
chr7 (55-168)||(10720480-10720595)
chr7 (55-168)||(7989219-7989335)
chr7 (62-159)||(22111248-22111348)
chr7 (62-159)||(40583241-40583341)
chr7 (55-165)||(44600536-44600648)
chr7 (55-168)||(47383493-47383608)
chr7 (54-163)||(48879480-48879591)
chr7 (55-163)||(40560474-40560584)
chr7 (68-168)||(41815618-41815720)
chr7 (55-168)||(32491019-32491134)
chr7 (61-168)||(41890162-41890270)
chr7 (58-168)||(23731647-23731761)
chr7 (98-168)||(19964151-19964221)
chr7 (55-168)||(45598991-45599109)
chr7 (90-168)||(34808306-34808384)
chr7 (86-168)||(36576505-36576585)
chr7 (58-168)||(48937805-48937916)
chr7 (55-166)||(35084012-35084126)
chr7 (55-166)||(29235981-29236093)
chr7 (236-288)||(23106420-23106472)
chr7 (236-288)||(45598871-45598923)
chr7 (236-288)||(19933150-19933202)
chr7 (236-288)||(19964289-19964341)
chr7 (236-288)||(23731527-23731579)
chr7 (236-288)||(35181159-35181211)
chr7 (236-288)||(40560349-40560401)
chr7 (236-284)||(43108000-43108048)
chr7 (236-288)||(47383373-47383425)
chr7 (238-288)||(21654218-21654268)
chr7 (236-288)||(3157403-3157455)
chr7 (236-288)||(22111425-22111477)
chr7 (236-288)||(32491202-32491254)
chr7 (236-288)||(34808186-34808238)
chr7 (236-288)||(36576385-36576437)
chr7 (236-288)||(40583112-40583164)
chr7 (236-288)||(41889138-41889190)
chr7 (236-288)||(48879355-48879407)
chr7 (236-284)||(48937984-48938032)
chr7 (236-284)||(48943010-48943058)
chr7 (241-288)||(18206419-18206466)
chr7 (55-143)||(40593930-40594020)
chr7 (243-284)||(9818450-9818491)
chr7 (243-284)||(10720375-10720416)
chr7 (236-288)||(30082320-30082372)
chr7 (236-288)||(42617638-42617690)
chr7 (236-288)||(44600413-44600465)
chr7 (238-284)||(41890339-41890385)
chr7 (54-168)||(33153126-33153242)
chr7 (55-163)||(28843437-28843545)
chr7 (55-163)||(30082445-30082553)
chr7 (244-288)||(41815796-41815840)
chr7 (55-163)||(25737580-25737690)
chr7 (236-288)||(35084196-35084248)
chr7 (81-152)||(2633318-2633389)
chr7 (55-163)||(18102627-18102737)
chr7 (55-163)||(46760210-46760320)
chr7 (62-109)||(18800686-18800735)
chr7 (58-113)||(35923398-35923455)
chr7 (55-113)||(14806016-14806076)
chr7 (55-113)||(15253010-15253070)
chr7 (55-113)||(22632236-22632296)
chr7 (236-281)||(33153013-33153058)
chr7 (237-286)||(39348758-39348807)
chr7 (236-288)||(18800869-18800921)
chr7 (70-167)||(28608461-28608560)
[»] chr6 (27 HSPs)
chr6 (55-168)||(17721763-17721878)
chr6 (55-168)||(30766534-30766649)
chr6 (55-166)||(10228002-10228115)
chr6 (55-168)||(5121410-5121525)
chr6 (54-168)||(374187-374303)
chr6 (55-168)||(12278794-12278909)
chr6 (55-168)||(30949223-30949338)
chr6 (54-168)||(31887073-31887190)
chr6 (99-168)||(17598381-17598450)
chr6 (236-288)||(17598261-17598313)
chr6 (236-288)||(30949103-30949155)
chr6 (70-168)||(21964045-21964145)
chr6 (70-168)||(32882660-32882760)
chr6 (236-288)||(374067-374119)
chr6 (236-288)||(10227880-10227932)
chr6 (236-288)||(12278674-12278726)
chr6 (236-288)||(17721946-17721998)
chr6 (236-284)||(31887258-31887306)
chr6 (236-288)||(33756224-33756276)
chr6 (55-168)||(7274829-7274944)
chr6 (55-104)||(17599464-17599515)
chr6 (236-288)||(30766414-30766466)
chr6 (55-163)||(21542515-21542625)
chr6 (54-163)||(35129007-35129118)
chr6 (55-163)||(11082199-11082309)
chr6 (239-286)||(32882833-32882880)
chr6 (116-163)||(33756349-33756396)
[»] chr5 (44 HSPs)
chr5 (55-168)||(25962402-25962517)
chr5 (55-168)||(31316755-31316870)
chr5 (54-168)||(8145966-8146082)
chr5 (58-164)||(8541521-8541629)
chr5 (55-168)||(20914949-20915064)
chr5 (55-168)||(35462673-35462787)
chr5 (55-167)||(16286037-16286151)
chr5 (55-168)||(24432354-24432469)
chr5 (55-168)||(12638979-12639093)
chr5 (55-168)||(13146819-13146934)
chr5 (55-168)||(30086500-30086617)
chr5 (55-163)||(31690574-31690684)
chr5 (52-168)||(42365125-42365243)
chr5 (88-164)||(37066212-37066288)
chr5 (55-168)||(36413890-36414005)
chr5 (236-288)||(8146150-8146202)
chr5 (236-288)||(8541701-8541753)
chr5 (236-288)||(31690757-31690809)
chr5 (236-288)||(13146699-13146751)
chr5 (236-288)||(20914829-20914881)
chr5 (55-168)||(24439662-24439777)
chr5 (236-288)||(30086685-30086737)
chr5 (236-284)||(42365009-42365057)
chr5 (236-288)||(31316938-31316990)
chr5 (236-284)||(37066360-37066408)
chr5 (55-163)||(42273744-42273852)
chr5 (241-288)||(25962594-25962641)
chr5 (55-166)||(8144026-8144139)
chr5 (238-288)||(35462857-35462907)
chr5 (236-288)||(12638859-12638911)
chr5 (236-288)||(16286220-16286272)
chr5 (236-284)||(24432537-24432585)
chr5 (238-284)||(17825337-17825383)
chr5 (55-163)||(20644111-20644222)
chr5 (236-288)||(2002270-2002322)
chr5 (55-168)||(25840956-25841071)
chr5 (54-146)||(37562717-37562808)
chr5 (55-163)||(11261839-11261948)
chr5 (55-113)||(12792741-12792800)
chr5 (60-163)||(43589921-43590026)
chr5 (89-146)||(20039216-20039273)
chr5 (236-288)||(24439542-24439594)
chr5 (55-163)||(34425427-34425533)
chr5 (236-288)||(8143904-8143956)
[»] chr3 (61 HSPs)
chr3 (55-168)||(21654334-21654449)
chr3 (55-168)||(26641028-26641143)
chr3 (55-168)||(32322155-32322270)
chr3 (55-168)||(55400827-55400942)
chr3 (55-168)||(34022688-34022803)
chr3 (55-168)||(53020272-53020387)
chr3 (54-168)||(31126301-31126417)
chr3 (55-168)||(46295992-46296108)
chr3 (62-162)||(46580630-46580732)
chr3 (63-168)||(45347637-45347744)
chr3 (55-163)||(37323999-37324109)
chr3 (54-168)||(49068140-49068256)
chr3 (55-168)||(51426708-51426823)
chr3 (55-168)||(28793251-28793362)
chr3 (55-168)||(16739081-16739191)
chr3 (64-168)||(46820123-46820229)
chr3 (54-168)||(52252125-52252238)
chr3 (72-168)||(1335199-1335297)
chr3 (81-168)||(43576046-43576133)
chr3 (55-168)||(51255275-51255390)
chr3 (55-143)||(13541347-13541437)
chr3 (55-168)||(36188922-36189037)
chr3 (55-144)||(23514554-23514646)
chr3 (54-166)||(51309504-51309619)
chr3 (236-288)||(55400707-55400759)
chr3 (105-168)||(45781486-45781549)
chr3 (236-288)||(1335079-1335131)
chr3 (236-288)||(13541246-13541298)
chr3 (236-284)||(21654218-21654266)
chr3 (236-288)||(31126181-31126233)
chr3 (236-284)||(37324183-37324231)
chr3 (236-288)||(49068020-49068072)
chr3 (241-288)||(52252005-52252052)
chr3 (236-288)||(23513536-23513588)
chr3 (236-288)||(26641211-26641263)
chr3 (236-288)||(45781366-45781418)
chr3 (236-288)||(46296176-46296228)
chr3 (236-288)||(46580505-46580557)
chr3 (236-288)||(46820018-46820070)
chr3 (236-288)||(51255155-51255207)
chr3 (236-284)||(53020156-53020204)
chr3 (238-284)||(51426592-51426638)
chr3 (55-163)||(26724906-26725014)
chr3 (236-284)||(52172109-52172157)
chr3 (245-284)||(16739263-16739302)
chr3 (236-283)||(43575931-43575978)
chr3 (236-288)||(28793130-28793183)
chr3 (236-288)||(32322338-32322390)
chr3 (55-163)||(37042330-37042440)
chr3 (81-162)||(31292707-31292788)
chr3 (236-288)||(36189105-36189158)
chr3 (256-288)||(34022590-34022622)
chr3 (55-146)||(54464808-54464902)
chr3 (55-113)||(2927441-2927501)
chr3 (89-166)||(30612269-30612346)
chr3 (240-289)||(47444073-47444121)
chr3 (240-288)||(2994518-2994565)
chr3 (54-86)||(10114791-10114823)
chr3 (240-288)||(22456108-22456155)
chr3 (240-288)||(22479154-22479201)
chr3 (54-113)||(54725534-54725594)
[»] scaffold0495 (2 HSPs)
scaffold0495 (55-166)||(4720-4833)
scaffold0495 (236-288)||(4599-4650)
[»] scaffold0300 (1 HSPs)
scaffold0300 (53-113)||(525-587)


Alignment Details
Target: chr8 (Bit Score: 164; Significance: 1e-87; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 31132932 - 31133099
Alignment:
Q  1 tgcagtaaaatgtgaaggtaaatcactttggtatggatgttcttctttggttggtactccctccgtcctaatttataagcaaaaaactaattcacactta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31132932 tgcagtaaaatgtgaaggtaaatcactttggtatggatgttcttctttggttggtactccctccgtcctaatttataagcaaaaaactaattcacactta 31133031  T
Q  101 ttaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31133032 ttaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataaatttcatgg 31133099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 27752792 - 27752677
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27752792 tactccctccgtcctgatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 27752693  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  27752692 ggaataagtttcatgg 27752677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 35260263 - 35260148
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35260263 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtatcattttttgtgttctcctt 35260164  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  35260163 ggaataagtttcatgg 35260148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 11044263 - 11044149
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11044263 tactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 11044164  T
Q  153 ggaataagtttcatg 167  Q
    |||||||||||||||    
T  11044163 ggaataagtttcatg 11044149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 27621336 - 27621221
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||    
T  27621336 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctactt 27621237  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  27621236 ggaataagtttcatgg 27621221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 11992934 - 11992820
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||||||||||||||| |||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11992934 tactccctccgtcctaatttataagtaaaaaacactaattcacactaattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 11992835  T
Q  153 ggaataagtttcatg 167  Q
    |||||||||||||||    
T  11992834 ggaataagtttcatg 11992820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 35344574 - 35344458
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa---ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35344574 tactccctacgtcctaatttataagcaaaaaaactctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 35344475  T
Q  152 tggaataagtttcatgg 168  Q
    || ||||||||||||||    
T  35344474 tgaaataagtttcatgg 35344458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 3100159 - 3100044
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  3100159 tactccctccgtcttaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctcgtt 3100060  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  3100059 ggaataagtttcatgg 3100044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 37598275 - 37598160
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37598275 tactccctccgtcctaatttataagcaaaaaacactaattcacggttattaagaaaactaacacttactgatttgaggtataattttttgtgttctcctt 37598176  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  37598175 gaaataagtttcatgg 37598160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 44411164 - 44411279
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  44411164 tactccttccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctcctt 44411263  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  44411264 gaaataagtttcatgg 44411279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 61 - 163
Target Start/End: Complemental strand, 44052821 - 44052717
Alignment:
Q  61 ctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 158  Q
    |||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44052821 ctccatcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctccttggaata 44052722  T
Q  159 agttt 163  Q
    |||||    
T  44052721 agttt 44052717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 25321541 - 25321656
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||| || |||||||||||||||||||| ||||||||||||    
T  25321541 tactccctccgtcctaatttataagcaaaaaacactaattcacacttatttagaaaactaacatttggtgatttgaggtataattttctgtgttctcctt 25321640  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||| ||||    
T  25321641 ggaataagttttatgg 25321656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 24612432 - 24612550
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa-----ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 149  Q
    |||||||||| | |||||||||||||||||||     ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  24612432 tactccctccattctaatttataagcaaaaaaaaacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttatgttctc 24612531  T
Q  150 cttggaataagtttcatgg 168  Q
    |||||||||||||||||||    
T  24612532 cttggaataagtttcatgg 24612550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 39187437 - 39187324
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||||||||||| |||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||   ||||||||||| |    
T  39187437 gtactccctccgtcataatttataagcaaaaaacactaattcacgcttattaagaaaactaacacttagtgatttgaggtataa---tttgtgttctcgt 39187341  T
Q  152 tggaataagtttcatgg 168  Q
    |||||||||||| ||||    
T  39187340 tggaataagttttatgg 39187324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 34713734 - 34713624
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||||||| ||||||| ||||||  |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| | |||    
T  34713734 tactccctccgtcctaagttataagtaaaaaatactaattcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgtttttctt 34713635  T
Q  153 ggaataagttt 163  Q
    | |||||||||    
T  34713634 gaaataagttt 34713624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 35346259 - 35346374
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaa-ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||| |||||||||||||||||| |||||  |||||||||| |||||||||||| ||| | ||||||||||||||||||||||||||||||||||||    
T  35346259 gtactccttccgtcctaatttataagaaaaaactctaattcacatttattaagaaaattaatatttagtgatttgaggtataattttttgtgttctcctt 35346358  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||| ||||||||    
T  35346359 gaaataaatttcatgg 35346374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 32678472 - 32678579
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac---taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||         ||||||||||||||||| ||    
T  32678472 tactccctccgtcctaatttataagcaaaaaaacattaattcacacttattaagaaaactaacacttagtg---------ataattttttgtgttcttct 32678562  T
Q  152 tggaataagtttcatgg 168  Q
    |||||||||||||||||    
T  32678563 tggaataagtttcatgg 32678579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 12108362 - 12108247
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaacta---attcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||||||||| |||||||||||| |||||| ||   |||| ||||||||||||||||||||| ||||| |||||| ||||||||||||||||| || |    
T  12108362 tactccctccgttctaatttataagaaaaaaaatattaattctcacttattaagaaaactaacatttagtaatttgaagtataattttttgtgttatctt 12108263  T
Q  152 tggaataagtttcatg 167  Q
    || |||||||||||||    
T  12108262 tgaaataagtttcatg 12108247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 36538236 - 36538149
Alignment:
Q  81 aaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||||||| |||||||||| ||||||| || |||||||||||||||    
T  36538236 aaaacactaattcacatttattaagaaaactaacatttagtgatttgaggaataattttttatgttctctttagaataagtttcatgg 36538149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 31133167 - 31133223
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataggct 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31133167 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacataggct 31133223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 2238550 - 2238663
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaact--aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||  ||||||||||||||||||   |||||||||||||||||||||| || || ||||  ||||||||||||  ||||||||| | |||    
T  2238550 tactccctccgtctcaatttataagcaaaaaacacaaattcacacttattaagaaaacaaaaacatagtagtttgaggtataa--ttttgtgtttttctt 2238647  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  2238648 ggaataagtttcatgg 2238663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 27621153 - 27621101
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27621153 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 27621101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 35260078 - 35260028
Alignment:
Q  238 aatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35260078 aatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 35260028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 41426538 - 41426430
Alignment:
Q  62 tccgtcctaatttataagcaaaaaactaa--ttcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 159  Q
    ||||||| |||||||||||||||||| ||  |||||| ||||| | ||||| || || ||||  ||| ||||||||||||||||||||| ||||||||||    
T  41426538 tccgtcccaatttataagcaaaaaacaaaaattcacatttattgaaaaaacaaaaacatagtagtttaaggtataattttttgtgttcttcttggaataa 41426439  T
Q  160 gtttcatgg 168  Q
    |||||||||    
T  41426438 gtttcatgg 41426430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 236 - 285
Target Start/End: Original strand, 44358629 - 44358678
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaac 285  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44358629 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaac 44358678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 3099976 - 3099928
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3099976 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 3099928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 11992751 - 11992703
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11992751 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 11992703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 25321724 - 25321776
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25321724 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 25321776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 27752609 - 27752557
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27752609 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 27752557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 32678647 - 32678699
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32678647 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 32678699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 33851161 - 33851213
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33851161 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 33851213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 36538081 - 36538029
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36538081 gcaaattgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 36538029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 37567449 - 37567501
Alignment:
Q  116 cttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37567449 cttagtgatttgaggtataattttttgtgttctctttggaataagtttcatgg 37567501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 37567569 - 37567621
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  37567569 gcaatttgcatttaattttacattggaaaagatgatttgtctgaaaaaacata 37567621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 37598093 - 37598041
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37598093 gcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacata 37598041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 39187256 - 39187204
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39187256 gcaatttgcatttaattttacattggaaatgatgatttgtttgaaaaaacata 39187204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 44052644 - 44052596
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44052644 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 44052596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 37566453 - 37566519
Alignment:
Q  56 actccctccgtcctaatttataagcaaaaa--actaattcacacttattaagaaaactaacacttag 120  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||||    
T  37566453 actccctccgtcctaatttataagcaaaaaacactaattcacacttattaaaaaaactaatacttag 37566519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 24510652 - 24510765
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaact--aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||| ||| ||||||||||||||||||   |||||||||||||||| ||||| || || ||||  ||||||||||||  ||||||||| |  ||    
T  24510652 tactccctccatcccaatttataagcaaaaaacataaattcacacttattaataaaacaaaaacatagtagtttgaggtataa--ttttgtgtttttatt 24510749  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  24510750 ggaataagtttcatgg 24510765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 24612618 - 24612670
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  24612618 gcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacata 24612670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 35346442 - 35346494
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  35346442 gcaatttgcattcaattttacattgaaaaagatgatttgtttgaaaaaacata 35346494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 44411347 - 44411395
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44411347 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaa 44411395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 29920251 - 29920338
Alignment:
Q  81 aaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    |||||| ||| |||||||||||||||||||||| || ||   |||||| ||| ||||||||||||| || ||||||||||||||||||    
T  29920251 aaaaaattaaatcacacttattaagaaaactaaaacataagaatttgaagtacaattttttgtgttatctttggaataagtttcatgg 29920338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 111 - 165
Target Start/End: Original strand, 40486505 - 40486559
Alignment:
Q  111 taacacttagtgatttgaggtataattttttgtgttctccttggaataagtttca 165  Q
    ||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  40486505 taacacttaatgatttgaggtataattttttgtattctccttagaataagtttca 40486559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 2053069 - 2052953
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||| ||||||| || || |||||||||||   ||| |||||||||||||||||||||| || || | ||| || ||||||||||||||||| || |    
T  2053069 gtactccatccgtcccaaattgtaagcaaaaaaacttaaatcacacttattaagaaaactaaaacataataattagaagtataattttttgtgttttctt 2052970  T
Q  152 tggaataagtttcatgg 168  Q
    | |||||||||| ||||    
T  2052969 tagaataagttttatgg 2052953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 11044080 - 11044028
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  11044080 gcaacttgcatttaattttacattggaaaatatgatttatttgaaaaaacata 11044028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 33851041 - 33851093
Alignment:
Q  116 cttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||||||||    
T  33851041 cttagtaatttgaggaataattttttgtgttctctttggaataagtttcatgg 33851093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 34713551 - 34713511
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtt 276  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  34713551 gcaatttgcatttaattttacattggaaaagatgatttgtt 34713511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 44358508 - 44358556
Alignment:
Q  115 acttagtgatttgaggtataattttttgtgttctccttggaataagttt 163  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  44358508 acttagtgattttaggtataattttttgtgttctccttagaataagttt 44358556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 283
Target Start/End: Original strand, 40487803 - 40487850
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 283  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  40487803 gcaacttgcattgaattttacattggaaaagatgatttgtttgaaaaa 40487850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 34890127 - 34890239
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaactaat---tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 150  Q
    ||||||||||||||| || ||||||||||||||  ||    |||||||||||||||||||||| || ||   |||||  ||||||||||||||||| ||     
T  34890127 gtactccctccgtcccaaattataagcaaaaaaaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttct 34890226  T
Q  151 ttggaataagttt 163  Q
    |||||| ||||||    
T  34890227 ttggaaaaagttt 34890239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 26483736 - 26483627
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat-tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttg 153  Q
    |||||||||||||| || ||||||| ||||||| ||  |||||||||||||||||||||| || ||   |||||| ||||| ||||||||||| || |||    
T  26483736 tactccctccgtcccaaattataagaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttg 26483637  T
Q  154 gaataagttt 163  Q
     || ||||||    
T  26483636 aaaaaagttt 26483627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 35344390 - 35344337
Alignment:
Q  236 gcaatttgcatttaattttacattg-gaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||||||    
T  35344390 gcaatttgcatttaattttacattgaaaaaaaatgatttgtttgaaaaaacata 35344337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 2238734 - 2238781
Alignment:
Q  239 atttgcatttaattttacattggaaaagatgatttgtttgaaaaaaca 286  Q
    |||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  2238734 atttgcatttaattttactttggaaaagatgatttttttgaaataaca 2238781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 13144326 - 13144268
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaactaa 113  Q
    |||||| ||||||| || ||||||||||||||  || ||||||||||||||||||||||    
T  13144326 tactccttccgtcccaaattataagcaaaaaaaaaaatcacacttattaagaaaactaa 13144268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 12108192 - 12108145
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||||||||    
T  12108192 gcaatttgcattgaattttacatt-gaaaaaatgatttgtttgaaaaaa 12108145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 24893044 - 24892988
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaact 111  Q
    |||||||||||||| || ||||||||||||||  ||  |||||||||||||||||||    
T  24893044 tactccctccgtcccaaattataagcaaaaaaaaaaaacacacttattaagaaaact 24892988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 16643270 - 16643224
Alignment:
Q  238 aatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    ||||||||||| ||||||| || ||||||||||||||||| ||||||    
T  16643270 aatttgcattttattttacttttgaaaagatgatttgtttaaaaaaa 16643224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 146
Target Start/End: Complemental strand, 27740808 - 27740715
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaact--aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgtt 146  Q
    |||||||| |||| |||||||| || ||||||    |||||| ||||||||| |||| ||| || |||| ||||||| ||||||||||||||||    
T  27740808 tactcccttcgtcttaatttatgagtaaaaaaagtaaattcatacttattaaaaaaattaaaacatagtaatttgagatataattttttgtgtt 27740715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 163
Target Start/End: Complemental strand, 34900090 - 34900020
Alignment:
Q  93 cacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagttt 163  Q
    ||||||||||||||||||||| || || | ||||| | |||| ||||||||||||  ||| ||||||||||    
T  34900090 cacacttattaagaaaactaaaacataataatttgcgatatatttttttgtgttcctcttagaataagttt 34900020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 41426362 - 41426325
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgattt 273  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  41426362 gcaatttgcatttaattttactttgaaaaagatgattt 41426325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 24510833 - 24510885
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||  ||| |||||||| ||||||| ||||||| ||||||    
T  24510833 gcaatttgcatttaatactactttggaaaaaatgatttttttgaaataacata 24510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 41362449 - 41362496
Alignment:
Q  240 tttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||| | ||||||||||| |||| ||||||||||||||    
T  41362449 tttgcatttaattttcctttggaaaagataattt-tttgaaaaaacata 41362496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 4e-53; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 46 - 168
Target Start/End: Original strand, 30776395 - 30776519
Alignment:
Q  46 tttggttggtactccctccgtcctaatttataagcaaaa--aactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgt 143  Q
    |||||| | ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30776395 tttggtagatactccctccgtcctaatttataagcaaaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgt 30776494  T
Q  144 gttctccttggaataagtttcatgg 168  Q
    |||||||||||||||||||||||||    
T  30776495 gttctccttggaataagtttcatgg 30776519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 39969909 - 39970024
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39969909 tactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 39970008  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  39970009 ggaataagtttcatgg 39970024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 29180332 - 29180445
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29180332 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 29180431  T
Q  153 ggaataagtttcat 166  Q
    ||||||||||||||    
T  29180432 ggaataagtttcat 29180445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 10591423 - 10591538
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10591423 tactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcctt 10591522  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  10591523 ggaataagtttcatgg 10591538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 30777689 - 30777572
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaa---ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 150  Q
    |||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30777689 gtactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaactaacaattagtgatttgaggtataattttttgtgttctcc 30777590  T
Q  151 ttggaataagtttcatgg 168  Q
    ||| ||||||||||||||    
T  30777589 ttgaaataagtttcatgg 30777572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 37788651 - 37788536
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||  |||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37788651 tactccctctctcctaatttataagcaaaaaatattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 37788552  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  37788551 ggaataagtttcatgg 37788536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 29899918 - 29899800
Alignment:
Q  52 tggtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 149  Q
    |||||||||||||||||||||||||||| |||||||  ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29899918 tggtactccctccgtcctaatttataagtaaaaaacactaattcacatttattaagaaaactaacacgtagtgatttgaggtataattttttgtgttctc 29899819  T
Q  150 cttggaataagtttcatgg 168  Q
    |||||||||||||| ||||    
T  29899818 cttggaataagttttatgg 29899800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 53677403 - 53677512
Alignment:
Q  59 ccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaa 156  Q
    ||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53677403 ccctccgtcctaatttataagtaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaa 53677502  T
Q  157 taagtttcat 166  Q
    | ||||||||    
T  53677503 tgagtttcat 53677512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 28681859 - 28681744
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28681859 tactctctccgtcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcctt 28681760  T
Q  153 ggaataagtttcatgg 168  Q
     |||||||||| ||||    
T  28681759 agaataagttttatgg 28681744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 58 - 167
Target Start/End: Complemental strand, 43980695 - 43980584
Alignment:
Q  58 tccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgga 155  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |    
T  43980695 tccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataaatttttgtgttctccttgaa 43980596  T
Q  156 ataagtttcatg 167  Q
    ||||||||||||    
T  43980595 ataagtttcatg 43980584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 50768645 - 50768530
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||| |||||    
T  50768645 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttagtgattcgagatataattttttgtgttttcctt 50768546  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  50768545 ggaataagtttcatgg 50768530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 55937622 - 55937738
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||| ||||||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  55937622 gtaccccctccgtcctaatttataagtaaaaaacactaattcatacttattaagaaaactaacacttagtgatttgaggtataagtttttgtgttctcct 55937721  T
Q  152 tggaataagtttcatgg 168  Q
    || ||||||||||||||    
T  55937722 tgaaataagtttcatgg 55937738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 3043087 - 3043202
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||| ||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  3043087 tactctctccgtcctaatttataagtaaaaaacactaattcacacttattaagaaaactaacacttagtgagttgaggtataattttttgtgtactcctt 3043186  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  3043187 gaaataagtttcatgg 3043202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 9797995 - 9798110
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||| ||||||||||||||||||||||||  ||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  9797995 tactcccttcgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacatttagtgatttgaggtataattttttgcgttctcctt 9798094  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  9798095 gaaataagtttcatgg 9798110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 47807388 - 47807280
Alignment:
Q  61 ctccgtcctaatttataagcaaaaa-actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 159  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||| |||||||||    
T  47807388 ctccgtcctaatttataagcaaaaacactaattcacacttattaagaaaattaatccttagtgatttgaggtataattttttgtgttctctttggaataa 47807289  T
Q  160 gtttcatgg 168  Q
    |||||||||    
T  47807288 gtttcatgg 47807280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 51495348 - 51495235
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaa-actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttg 153  Q
    ||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||     
T  51495348 tactccctccgtcctaatttataagaaaaaacactaattcacagttattaagaaaattaacacttaatgatttgaggtataattttttgtgttctcttta 51495249  T
Q  154 gaataagtttcatg 167  Q
     |||||||||||||    
T  51495248 taataagtttcatg 51495235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 38941036 - 38940956
Alignment:
Q  86 actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcat 166  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38941036 actaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctccttggaataagtttcat 38940956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 38187648 - 38187760
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataa-ttttttgtgttctcct 151  Q
    |||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   ||    
T  38187648 tactccctccgtcctaatttataagctaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttttgtgtt---ct 38187744  T
Q  152 tggaataagtttcatg 167  Q
    | ||||||||||||||    
T  38187745 tagaataagtttcatg 38187760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 49902214 - 49902113
Alignment:
Q  68 ctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttca 165  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||  |||||||||||||||    
T  49902214 ctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttatgttctagttggaataagtttca 49902115  T
Q  166 tg 167  Q
    ||    
T  49902114 tg 49902113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 32012261 - 32012362
Alignment:
Q  70 aatttataagcaaaaaac---taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcat 166  Q
    |||||||||||||||||    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  | ||||||||||    
T  32012261 aatttataagcaaaaaaacattaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttctccttaaattaagtttcat 32012360  T
Q  167 gg 168  Q
    ||    
T  32012361 gg 32012362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 5222212 - 5222326
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaacta---attcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||||||||||  ||||||||||||||||| ||   |||||||||||||||||||||||| || |||| ||||||| |||||||||||||||||| ||    
T  5222212 tactccctccgtctcaatttataagcaaaaaaatataaattcacacttattaagaaaactaatacatagtaatttgagttataattttttgtgttcttct 5222311  T
Q  152 tggaataagtttcat 166  Q
    || ||||||||||||    
T  5222312 tgaaataagtttcat 5222326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 1620230 - 1620115
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa---ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||||| || ||||||||||| |||||||   ||||||||||||||||||| ||  ||| ||||||||||||||| ||| |||||||||||||||||    
T  1620230 tactccctcggttctaatttataaacaaaaaaacactaattcacacttattaaggaagttaatacttagtgatttgagatatcattttttgtgttctcct 1620131  T
Q  152 tggaataagtttcatg 167  Q
    | ||||||||||||||    
T  1620130 tagaataagtttcatg 1620115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 88 - 168
Target Start/End: Complemental strand, 52713220 - 52713140
Alignment:
Q  88 taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    ||||||| | |||||||||||||||| |||||||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  52713220 taattcatatttattaagaaaactaatacttagtgatttgaagtataattttttgtgtttttcttggaataagtttcatgg 52713140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 3043270 - 3043322
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3043270 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 3043322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 10591606 - 10591658
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10591606 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 10591658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 38940886 - 38940834
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38940886 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 38940834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 52713080 - 52713028
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52713080 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 52713028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 53677582 - 53677634
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53677582 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 53677634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 237 - 288
Target Start/End: Original strand, 9798179 - 9798230
Alignment:
Q  237 caatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9798179 caatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 9798230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 29899732 - 29899680
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29899732 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 29899680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 32012430 - 32012482
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32012430 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacata 32012482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 37788468 - 37788416
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37788468 gcaagttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 37788416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 39970092 - 39970144
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39970092 gcaatttgcatttaattttacattggaaaagatgatttggttgaaaaaacata 39970144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 43980515 - 43980467
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43980515 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 43980467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 47807212 - 47807160
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  47807212 gcaatttgcatttaattttacattggaaaagatgatttctttgaaaaaacata 47807160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 49902044 - 49901992
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  49902044 gcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaaacata 49901992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 50768462 - 50768410
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50768462 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 50768410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 51495166 - 51495114
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51495166 gcaatttgcatttaattttacattggaaaagatgatttgtttaaaaaaacata 51495114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 288
Target Start/End: Original strand, 55937811 - 55937858
Alignment:
Q  241 ttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55937811 ttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 55937858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 30011873 - 30011989
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaa---ttcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||||||| |||||||| |||||||||||| ||    ||||||||||||||||||  ||| |  | || |||||||||||||||||||||||| |  |    
T  30011873 tactccctccatcctaattcataagcaaaaaaatacaatttcacacttattaagaaagttaaaatattgtaatttgaggtataattttttgtgttatttt 30011972  T
Q  152 tggaataagtttcatgg 168  Q
    |||||||||||||||||    
T  30011973 tggaataagtttcatgg 30011989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 27750451 - 27750503
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  27750451 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaataacata 27750503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 29180515 - 29180567
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  29180515 gcaatttgcatttaattttacattggaaaagataatttctttgaaaaaacata 29180567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 30776587 - 30776639
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  30776587 gcaatttgcatttaattttacattggaaaagataatttctttgaaaaaacata 30776639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 30777504 - 30777452
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  30777504 gcaatttgcatttaattttacattggaaaagataatttctttgaaaaaacata 30777452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 38187829 - 38187881
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  38187829 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaatacata 38187881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 1620046 - 1619998
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  1620046 gcaaattgcatttaattttacattgaaaaagatgatttgtttgaaaaaa 1619998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 47868085 - 47867974
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||||||||||||||| ||||||||||||||  ||   |||||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || |    
T  47868085 gtactccctccgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctt 47867986  T
Q  152 tggaataagttt 163  Q
    ||||| ||||||    
T  47867985 tggaaaaagttt 47867974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 5064606 - 5064712
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttg 153  Q
    ||||||||||||||| |  ||||||||||||||   | |||||||||||||||||||||| || |||| |||||    ||||||||||||||| || |||    
T  5064606 gtactccctccgtcccatattataagcaaaaaa---aatcacacttattaagaaaactaaaacatagtaatttgtaacataattttttgtgttatctttg 5064702  T
Q  154 gaataagttt 163  Q
     |||||||||    
T  5064703 aaataagttt 5064712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 17236262 - 17236329
Alignment:
Q  99 tattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcat 166  Q
    ||||||||||||||| || || |  ||||||||||||||||||||||||| |||| ||||||||||||    
T  17236262 tattaagaaaactaaaacataatagtttgaggtataattttttgtgttcttcttgaaataagtttcat 17236329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 55 - 109
Target Start/End: Complemental strand, 51495427 - 51495372
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaa-actaattcacacttattaagaaaa 109  Q
    ||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  51495427 tactccctccgtcctaatttataagaaaaaatattaattcacacttattaagaaaa 51495372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 2229452 - 2229342
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||| || ||||||||||||||  ||   |||||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || ||    
T  2229452 tactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 2229353  T
Q  153 ggaataagttt 163  Q
    |||| ||||||    
T  2229352 ggaaaaagttt 2229342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 27750313 - 27750383
Alignment:
Q  98 ttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    |||||||||||| ||||| ||||||||||||| ||| |||||||||||| |  ||  ||||||||||||||    
T  27750313 ttattaagaaaattaacatttagtgatttgagatatgattttttgtgttttttttttaataagtttcatgg 27750383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 48793577 - 48793637
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaa 113  Q
    ||||||||||||||||| ||||||| |||||||   || ||||||||||||||||||||||    
T  48793577 tactccctccgtcctaaattataagaaaaaaaccaaaaatcacacttattaagaaaactaa 48793637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 4058917 - 4058810
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgg 154  Q
    |||||||||||||| || ||||||||||||||  || ||||| |||||||||||||||| || ||   |||||  ||||| ||||||||||| || |||     
T  4058917 tactccctccgtcccaaattataagcaaaaaa-aaaatcacatttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttga 4058819  T
Q  155 aataagttt 163  Q
    || ||||||    
T  4058818 aaaaagttt 4058810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 163
Target Start/End: Complemental strand, 20281787 - 20281686
Alignment:
Q  61 ctccgtcctaatttataagcaaaaaactaat-tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 159  Q
    |||||||| || ||||||||||||||  ||| |||||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || |||||| ||    
T  20281787 ctccgtcccaaattataagcaaaaaa--aatatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttggaaaaa 20281690  T
Q  160 gttt 163  Q
    ||||    
T  20281689 gttt 20281686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 39078361 - 39078251
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||| || ||||||| ||||||  ||   |||||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || ||    
T  39078361 tactccctccgtcccaaattataagaaaaaaaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 39078262  T
Q  153 ggaataagttt 163  Q
    |||| ||||||    
T  39078261 ggaaaaagttt 39078251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 5222396 - 5222433
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgattt 273  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  5222396 gcaatttgcatttaattttactttggaaaaaatgattt 5222433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 23978249 - 23978296
Alignment:
Q  240 tttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||| | ||||||||||| |||| ||||||||||||||    
T  23978249 tttgcatttaatttttctttggaaaagataattt-tttgaaaaaacata 23978296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 28142755 - 28142802
Alignment:
Q  240 tttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||| | ||||||||||| |||| ||||||||||||||    
T  28142755 tttgcatttaattttcctttggaaaagataattt-tttgaaaaaacata 28142802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 38140842 - 38140894
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||| |||||||||| |  |||||||||||||||| ||||||| ||||||    
T  38140842 gcaattttcatttaatttcattttggaaaagatgatttttttgaaataacata 38140894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 792308 - 792424
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  792308 gtactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 792407  T
Q  152 tggaataagtttcatgg 168  Q
    |||||||||||||||||    
T  792408 tggaataagtttcatgg 792424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 14565326 - 14565441
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14565326 tactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 14565425  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  14565426 ggaataagtttcatgg 14565441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 21539960 - 21539845
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21539960 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 21539861  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  21539860 ggaataagtttcatgg 21539845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 4092214 - 4092099
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||| ||||||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4092214 tactccctccgttctaatttataagcaaaaaacactacttcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 4092115  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  4092114 ggaataagtttcatgg 4092099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 10979372 - 10979257
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  10979372 tactccctccgtcctaatttataagcaaaaaacactaattcacactcattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttctt 10979273  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  10979272 ggaataagtttcatgg 10979257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 35832615 - 35832500
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35832615 tactccctccatcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 35832516  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||| ||||||||    
T  35832515 ggaataaatttcatgg 35832500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 10478381 - 10478266
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  10478381 tactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgagttgagatataattttttgtgttctcctt 10478282  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  10478281 gaaataagtttcatgg 10478266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 38549596 - 38549711
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||| || ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38549596 tactccctctgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattctcctt 38549695  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  38549696 ggaataagtttcatgg 38549711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 43451708 - 43451593
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  43451708 tactccctccgtcctaatttataagcaaaaaatactaattcatacttattaagaaaactaacatttagtgatttgaggtatgattttttgtgttctcctt 43451609  T
Q  153 ggaataagtttcatgg 168  Q
     |||||||||||||||    
T  43451608 agaataagtttcatgg 43451593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 44804101 - 44803986
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||| |||||||||||||||||||||||| |||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44804101 tacttcctccgtcctaatttataagcaaacaacattaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcctt 44804002  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||| ||||    
T  44804001 ggaataagtttaatgg 44803986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 38071403 - 38071513
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  38071403 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtattctcctt 38071502  T
Q  153 ggaataagttt 163  Q
     ||||||||||    
T  38071503 agaataagttt 38071513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 54 - 167
Target Start/End: Original strand, 29513972 - 29514086
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  29513972 gtactccctccgtcctaatttataagcaaaaaacagtaattcacacttattaagaaaa-taacacttagtaatttgaggtataattttttgtgttctcct 29514070  T
Q  152 tggaataagtttcatg 167  Q
    | |||||| |||||||    
T  29514071 tagaataaatttcatg 29514086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 43075952 - 43075838
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  43075952 tactccctccgtcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttgaggtgtaa-tttttatgttctcctt 43075854  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  43075853 gaaataagtttcatgg 43075838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 29514428 - 29514542
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||    
T  29514428 tactccctccgtcctaatttataagcaaaaaacagtaattcatacttattaaaaaaactaacacttagtaatttgaggtataattttttgtgttatcctt 29514527  T
Q  153 ggaataagtttcatg 167  Q
     ||||||||||||||    
T  29514528 agaataagtttcatg 29514542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 55 - 153
Target Start/End: Original strand, 15858642 - 15858742
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15858642 tactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctcctt 15858741  T
Q  153 g 153  Q
    |    
T  15858742 g 15858742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 66 - 168
Target Start/End: Complemental strand, 28492712 - 28492608
Alignment:
Q  66 tcctaatttataagcaaaaa--actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagttt 163  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  28492712 tcctaatttataagcaaaaagcactaaatcacacttattaagaaaactaacacttaatgatttgagatataattttttgtgttctccttggaataagttt 28492613  T
Q  164 catgg 168  Q
    |||||    
T  28492612 catgg 28492608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 33635539 - 33635424
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||| | |||    
T  33635539 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatatttagtgatttgagatataattttttgtgtttttctt 33635440  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||| ||||||||    
T  33635439 ggaataaatttcatgg 33635424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 8784599 - 8784483
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac---taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||||||||  ||||||||||||||||||    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8784599 tactccctccgttttaatttataagcaaaaaaacattaattcatacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttct 8784500  T
Q  152 tggaataagtttcatgg 168  Q
    || ||||||||||||||    
T  8784499 tgaaataagtttcatgg 8784483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 28424478 - 28424359
Alignment:
Q  53 ggtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgag--gtataattttttgtgttct 148  Q
    |||||||||||||||||||||||||||||||||||  ||||| | ||||||||||||||||||||||||||||||||||  ||| ||  |||||||||||    
T  28424478 ggtactccctccgtcctaatttataagcaaaaaacactaattgatacttattaagaaaactaacacttagtgatttgagatgtaaaaaattttgtgttct 28424379  T
Q  149 ccttggaataagtttcatgg 168  Q
    ||||||||||||||||||||    
T  28424378 ccttggaataagtttcatgg 28424359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 5091495 - 5091607
Alignment:
Q  57 ctccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgg 154  Q
    ||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |      
T  5091495 ctccctccgttttaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttcttcctaa 5091594  T
Q  155 aataagtttcatg 167  Q
    |||||||||||||    
T  5091595 aataagtttcatg 5091607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 38564670 - 38564756
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataatttt 139  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  38564670 tactccctccgtcctaatttataaacaaaaaacgataattcacacttattaagaaaactaacatttagtgatttgaggtataatttt 38564756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 18833862 - 18833978
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaa---ttcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||||||||||||||||||||||||||||| ||    |||||||||||||||||| |||| |  | || |||||||||||||||||||||||| | ||    
T  18833862 tactccctccgtcctaatttataagcaaaaaaatacaatttcacacttattaagaaagctaaaatattgtaatttgaggtataattttttgtgttattct 18833961  T
Q  152 tggaataagtttcatgg 168  Q
    |||||||||||||||||    
T  18833962 tggaataagtttcatgg 18833978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 103 - 168
Target Start/End: Original strand, 4033678 - 4033743
Alignment:
Q  103 aagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  4033678 aagaaaactaacacttaatgatttgaggtataattttttgtgttctccttaaaataagtttcatgg 4033743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 28424293 - 28424242
Alignment:
Q  237 caatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28424293 caatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 28424242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 792492 - 792544
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  792492 gcaatttgcatttaattttacattggaaaagatgatttctttgaaaaaacata 792544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 15858746 - 15858798
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15858746 gcaatttgcatttaattttacattggaaaagatgatttatttgaaaaaacata 15858798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 21539777 - 21539725
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21539777 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 21539725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 22162340 - 22162288
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22162340 gcaatttgcatttaattttacattggaaaagattatttgtttgaaaaaacata 22162288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 35832432 - 35832380
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35832432 gcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaaacata 35832380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 43075770 - 43075718
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43075770 gcaatttgcatttaattttacattggaatagatgatttgtttgaaaaaacata 43075718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 167
Target Start/End: Original strand, 13822729 - 13822837
Alignment:
Q  64 cgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacactta---gtgatttgaggtataattttttgtgttctccttggaata 158  Q
    ||||| |||||||||||||||||  | |||||||||||||||||||||| || || ||   ||  ||||||||||||||||||||||||| ||| |||||    
T  13822729 cgtcccaatttataagcaaaaaatacaaattcacacttattaagaaaacaaaaacatactagtattttgaggtataattttttgtgttcttcttagaata 13822828  T
Q  159 agtttcatg 167  Q
    |||||||||    
T  13822829 agtttcatg 13822837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 4033811 - 4033863
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  4033811 gcaatttgcatttaattttacattgaaaaagatgttttgtttgaaaaaacata 4033863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 5091676 - 5091724
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5091676 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaa 5091724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 8784415 - 8784363
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  8784415 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaataacata 8784363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 14565509 - 14565557
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14565509 gcaatttgcatttaattttacattggaaaagatgatttctttgaaaaaa 14565557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 15068939 - 15068825
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaacta---attcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||| |||||||| |||||||||||||||||  |   | ||||||||||||||||||| || ||  |||  |||||||||| |||||||||||||| ||    
T  15068939 tactcactccgtcccaatttataagcaaaaaaacataaaatcacacttattaagaaaacaaaaacagagtagtttgaggtatgattttttgtgttcttct 15068840  T
Q  152 tggaataagtttcat 166  Q
    |||||||| ||||||    
T  15068839 tggaataaatttcat 15068825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 28492540 - 28492492
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28492540 gcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaaa 28492492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 29514155 - 29514207
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  29514155 gcaatttgcatttaattttacattaaaaaagatgatttgtttgaaaaaacata 29514207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 29514611 - 29514663
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  29514611 gcaatttacatttaattttacattgggaaagatgatttgtttgaaaaaacata 29514663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 33635356 - 33635304
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33635356 gcaacttgcatttaattttacattagaaaagatgatttgtttgaaaaaacata 33635304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 38549779 - 38549831
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38549779 gcaacttgcatttaattttacattggaaaagatgatttatttgaaaaaacata 38549831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 10478198 - 10478150
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||    
T  10478198 gcaacttgcatttaattttacattggaaaagatcatttgtttgaaaaaa 10478150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 29523994 - 29524109
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||||||| ||||||||||||||  ||   |||||||||||| |||||||||  | ||   |||||  | ||||||||||||||| || ||    
T  29523994 tactccctccgtcctaaattataagcaaaaaaacaaaaatcacacttattatgaaaactaaagcataagaatttgtagcataattttttgtgttttcttt 29524093  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  29524094 ggaataagtttcatgg 29524109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 43451525 - 43451473
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| |||||||||||||||||||| |||||||||||||||||||| ||||||    
T  43451525 gcaacttgcatttaattttacattgaaaaagatgatttgtttgaaataacata 43451473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 283
Target Start/End: Original strand, 38071574 - 38071621
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 283  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||    
T  38071574 gcaatttgtatataattttacattggaaaagatgatttgtttgaaaaa 38071621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 8701808 - 8701694
Alignment:
Q  55 tactccctccgtcctaatttataagcaa-aaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttg 153  Q
    |||||||||||||| || |||||||||| ||||| || |||| ||||||||||||||||| || ||   |||||  | ||| |||||| |||| || |||    
T  8701808 tactccctccgtcccaaattataagcaaaaaaacaaaatcacgcttattaagaaaactaaaacataaaaatttgtagcatagttttttatgttttctttg 8701709  T
Q  154 gaataagtttcatgg 168  Q
    |||||||||||||||    
T  8701708 gaataagtttcatgg 8701694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 4092031 - 4091983
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  4092031 gcaacttgcatttaattttacattgaaaaagatgatttatttgaaaaaa 4091983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 33932883 - 33932986
Alignment:
Q  61 ctccgtcctaatttataagcaaaaaactaatt-cacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 159  Q
    |||||||| || ||||||| |||||| | ||| ||||||||||||||||||||| || ||||  ||||  |||||||||||||| || | |||||| |||    
T  33932883 ctccgtcccaaattataaggaaaaaaatcatttcacacttattaagaaaactaaaacatagtattttgtagtataattttttgtattattcttggattaa 33932982  T
Q  160 gttt 163  Q
    ||||    
T  33932983 gttt 33932986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 35517330 - 35517220
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||| |||||||| ||||||||||||||  ||   |||||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || ||    
T  35517330 tactcccttcgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 35517231  T
Q  153 ggaataagttt 163  Q
    |||| ||||||    
T  35517230 ggaaaaagttt 35517220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 40808669 - 40808788
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaa-----ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttct 148  Q
    |||||||||||||||||| ||||||||||||||       || ||||||||||||||||||||||  | ||   |||||  | ||| ||||||||||| |    
T  40808669 gtactccctccgtcctaaattataagcaaaaaaaaaacaaaaatcacacttattaagaaaactaaagcataagaatttgtagcatagttttttgtgtttt 40808768  T
Q  149 ccttggaataagtttcatgg 168  Q
    | ||||||||||||||||||    
T  40808769 ctttggaataagtttcatgg 40808788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 44803918 - 44803871
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 283  Q
    |||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  44803918 gcaatttgtatttaattttacattggaaaagatgatttatttaaaaaa 44803871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 9294859 - 9294743
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaacta---attcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||||| ||||||||||||| | ||||||  |   |||| || |||||||||||||||| |  ||||  ||||| |||||||||||||| || | ||    
T  9294859 tactccctcagtcctaatttataggaaaaaaaacatcaattcgcatttattaagaaaactaaaagatagtagtttgaagtataattttttgtatttttct 9294760  T
Q  152 tggaataagtttcatgg 168  Q
    || ||||||||||||||    
T  9294759 tgaaataagtttcatgg 9294743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 15068755 - 15068718
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgattt 273  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  15068755 gcaatttgcatttaattttactttggaaaagatgattt 15068718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 7645219 - 7645295
Alignment:
Q  92 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    |||||||||||||||||||||| || ||   |||||  ||||||| ||||||||| ||||| |||||| ||||||||    
T  7645219 tcacacttattaagaaaactaaaacataagaatttggagtataatattttgtgttttccttagaataaatttcatgg 7645295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 9294675 - 9294623
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||| ||| |||||||||||| | ||||| ||||||    
T  9294675 gcaatttgcatttaattttactttgaaaaagatgatttttatgaaataacata 9294623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 249 - 288
Target Start/End: Complemental strand, 10979198 - 10979159
Alignment:
Q  249 aattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  10979198 aattctactttggaaaagatgatttgtttgaaaaaacata 10979159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 86
Target Start/End: Original strand, 6110145 - 6110179
Alignment:
Q  52 tggtactccctccgtcctaatttataagcaaaaaa 86  Q
    |||||||||||||||||||| ||||||||||||||    
T  6110145 tggtactccctccgtcctaaattataagcaaaaaa 6110179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 32010273 - 32010199
Alignment:
Q  89 aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagttt 163  Q
    ||||||||||||||||||||||||| || ||||  ||||   |||| ||||||||||| || ||| |||||||||    
T  32010273 aattcacacttattaagaaaactaatacatagtagtttgtaatatagttttttgtgttatctttgaaataagttt 32010199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 3201534 - 3201423
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaact---aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||| ||||||||| || ||||||||||||||     || |||||||||||||||||||||| || ||   |||| | ||||| ||||||||||| || |    
T  3201534 tacttcctccgtcccaaattataagcaaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttaaagtatagttttttgtgttttctt 3201435  T
Q  152 tggaataagttt 163  Q
    ||||| ||||||    
T  3201434 tggaaaaagttt 3201423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 159
Target Start/End: Original strand, 6765887 - 6765992
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaact-aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttg 153  Q
    |||||| |||||||||| || |||| |||||| | || |||||||||||||||||| ||| || ||   |||||| ||||| |||||| |||| || |||    
T  6765887 tactccttccgtcctaaattgtaaggaaaaaaatcaaatcacacttattaagaaaattaaaacataaaaatttgaagtatagttttttatgttttcattg 6765986  T
Q  154 gaataa 159  Q
    ||||||    
T  6765987 gaataa 6765992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 9864710 - 9864787
Alignment:
Q  92 tcacacttattaagaaaactaacacttagtgatttgaggtata-attttttgtgttctccttggaataagtttcatgg 168  Q
    |||||||||||||||||||||| || ||   |||||  |||||  ||||||||||| || ||||||||||||||||||    
T  9864710 tcacacttattaagaaaactaaaacataagaatttggagtatagtttttttgtgttttctttggaataagtttcatgg 9864787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 110
Target Start/End: Complemental strand, 12872286 - 12872234
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaac 110  Q
    |||||||||| |||||||||||||||   |||| |||||||| |||||||||||||    
T  12872286 tactccctccatcctaatttataagc---aaacaaattcacatttattaagaaaac 12872234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 35023069 - 35023012
Alignment:
Q  89 aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgtt 146  Q
    ||||||||||||||||||||||||| || ||   |||||  |||||||||||||||||    
T  35023069 aattcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgtt 35023012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 13822906 - 13822958
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||| ||| ||||||| |||| ||| ||| ||||||    
T  13822906 gcaatttgcatttaattttactttgaaaaagattatttttttaaaataacata 13822958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 23873784 - 23873899
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23873784 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 23873883  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  23873884 ggaataagtttcatgg 23873899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 25990951 - 25990836
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25990951 tactccctccgtcctaatttataagcaaaaaacattaaatcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 25990852  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  25990851 ggaataagtttcatgg 25990836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 26907048 - 26907163
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  26907048 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtgttctcctt 26907147  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  26907148 ggaataagtttcatgg 26907163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 46949524 - 46949409
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46949524 tactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcctt 46949425  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  46949424 ggaataagtttcatgg 46949409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 28916472 - 28916587
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaa-actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  28916472 gtactccctccgccctaatttataagaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttctt 28916571  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  28916572 ggaataagtttcatgg 28916587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 18913301 - 18913416
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa---ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18913301 tactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttgtgttctcct 18913400  T
Q  152 tggaataagtttcatg 167  Q
     |||||||||||||||    
T  18913401 cggaataagtttcatg 18913416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 40935570 - 40935685
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||| ||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40935570 tactccctccatcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctcctt 40935669  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  40935670 ggaataagtttcatgg 40935685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 43655994 - 43656109
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||| |||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43655994 tactccatccgtcctaatttaaaagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 43656093  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  43656094 gaaataagtttcatgg 43656109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 49924622 - 49924507
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  49924622 tactccctccgtcctaatttataagtaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttcttctt 49924523  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  49924522 gaaataagtttcatgg 49924507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 29488951 - 29488837
Alignment:
Q  55 tactccctccgtcctaatttataag-caaaaa-actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  29488951 tactccctccgtcctaatttataagtcaaaaacactaattcacacttattaagaaaacgaacacttagtgatttgaggtataatttgttgtgttctcctt 29488852  T
Q  153 ggaataagtttcatg 167  Q
    |||||||||||||||    
T  29488851 ggaataagtttcatg 29488837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 31970265 - 31970381
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||    
T  31970265 gtactccttccgtcctaatttataagcaaaaaatactaattcacacttattaagaagattaacacttagtgatttgaggtatgattttttgtgttctcct 31970364  T
Q  152 tggaataagtttcatgg 168  Q
    |||||||||||||||||    
T  31970365 tggaataagtttcatgg 31970381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 40220262 - 40220144
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagt---gatttgaggtataattttttgtgttctc 149  Q
    ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  40220262 tactccctccgtcctaatttacaagcaaaaaacagtaattcacacttattaagaaaactaacacttagtagtgatttgaggtataattttttgtgttctc 40220163  T
Q  150 cttggaataagtttcatgg 168  Q
    |||||||||||||||||||    
T  40220162 cttggaataagtttcatgg 40220144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 44875383 - 44875267
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44875383 gtactctctccgtcctaatttataagcaaaaaacactaattcacacttactaagaaaactaacacttagtgatttgaggtataaatttttgtgttctcct 44875284  T
Q  152 tggaataagtttcatgg 168  Q
    | |||||||||||||||    
T  44875283 tagaataagtttcatgg 44875267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 18852426 - 18852311
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  18852426 tactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaagctaacagttagtgatttgaggtataattttttgtgttctcctt 18852327  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  18852326 gaaataagtttcatgg 18852311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 40960431 - 40960546
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  40960431 tactccttccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgaggcatgattttttgtgttctcctt 40960530  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  40960531 ggaataagtttcatgg 40960546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 18036747 - 18036633
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||    
T  18036747 tactccctccgtcctaatttataagtaaaaaacattaattcatacttattaagaaaactaacacttaatgatttgaggtataattttttgtgttcttctt 18036648  T
Q  153 ggaataagtttcatg 167  Q
    |||||||||||||||    
T  18036647 ggaataagtttcatg 18036633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 38942397 - 38942513
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac---taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||| ||||||| ||| |||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38942397 tacttcctccgttctattttataagcaaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 38942496  T
Q  152 tggaataagtttcatgg 168  Q
    |||||||||||||||||    
T  38942497 tggaataagtttcatgg 38942513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 15286005 - 15285891
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaa-actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttg 153  Q
    |||||| ||||| |||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15286005 tactccatccgttctaatttataagaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaagtataattttttgtgttctccttg 15285906  T
Q  154 gaataagtttcatgg 168  Q
     ||||||||||||||    
T  15285905 aaataagtttcatgg 15285891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 39026202 - 39026318
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa---ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||    
T  39026202 tactccctccgtcctaatttataagcaaaaaaacactaattcacatttattaagaaaactaacacttggtgatttgatgtataattttttgtgttcttct 39026301  T
Q  152 tggaataagtttcatgg 168  Q
    || ||||||||||||||    
T  39026302 tgaaataagtttcatgg 39026318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 28017859 - 28017746
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||    
T  28017859 tactccctctgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttt--tgtactcctt 28017762  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  28017761 gaaataagtttcatgg 28017746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 15311380 - 15311265
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||| |||||||| ||||||||||||| |||||  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||    
T  15311380 tacttcctccgtcataatttataagcataaaacactaattcacacttattaagaaaactaatacttaatgatttgaggtataattttttgtattctcctt 15311281  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  15311280 ggaataagtttcatgg 15311265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 35942039 - 35941929
Alignment:
Q  60 cctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaat 157  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||| |||    
T  35942039 cctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaattatttgaggtataattttttgtgctctccttgaaat 35941940  T
Q  158 aagtttcatgg 168  Q
    |||||| ||||    
T  35941939 aagttttatgg 35941929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 58 - 168
Target Start/End: Original strand, 45357835 - 45357948
Alignment:
Q  58 tccctccgtcctaatttataagcaaaaaac----taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttg 153  Q
    |||||||||||||||||||||||||||||     ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||    
T  45357835 tccctccgtcctaatttataagcaaaaaaaacattaattcacacttattaagacaactaacacttagtgatttgaggtataattttttgtgttc-ctttg 45357933  T
Q  154 gaataagtttcatgg 168  Q
    |||||||||||||||    
T  45357934 gaataagtttcatgg 45357948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 9128246 - 9128131
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||| |||||||||||||||||| ||||||   |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  9128246 tactccatccgtcctaatttataagtaaaaaatattaattcacacttattaagaaaattaacacttagtgatttgaggtatacttttttgtgttctcctt 9128147  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||| ||| ||||    
T  9128146 gaaataaatttaatgg 9128131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 60 - 168
Target Start/End: Complemental strand, 35189400 - 35189289
Alignment:
Q  60 cctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaa-ctaacacttagtgatttgaggtataattttttgtgttctccttggaa 156  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||| ||||||||||||||||||| |||||| |||| ||    
T  35189400 cctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaaactaacacttagtaatttgaggtataattttttatgttcttcttgaaa 35189301  T
Q  157 taagtttcatgg 168  Q
    ||||||||||||    
T  35189300 taagtttcatgg 35189289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 26479943 - 26479827
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac---taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||| ||||||| |||||||||||||||||||    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  26479943 tacttcctccgttctaatttataagcaaaaaaacaataattcacacttattaaaaaaactaacatttagtgatttgaggtataattttttgtgttctcct 26479844  T
Q  152 tggaataagtttcatgg 168  Q
    |  ||||||||| ||||    
T  26479843 taaaataagttttatgg 26479827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 6848267 - 6848381
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||| |||||||||||||| |||||||  ||||||||| ||||||| |||||||| | ||||||||||||||||| ||||||||||||||||||    
T  6848267 tactccctccatcctaatttataagaaaaaaacactaattcacatttattaa-aaaactaataattagtgatttgaggtatgattttttgtgttctcctt 6848365  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  6848366 gaaataagtttcatgg 6848381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 72 - 163
Target Start/End: Complemental strand, 47997140 - 47997047
Alignment:
Q  72 tttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagttt 163  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| | |||| | |||||||    
T  47997140 tttataagcaaaaaacagtaattcacacttattaagaaaactaacatttagtgatttgaggtattattttttgtgtttttcttgaagtaagttt 47997047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 4529378 - 4529300
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaa-actaattcacacttattaagaaaactaacacttagtgatttgaggta 132  Q
    |||||| ||||| |||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  4529378 tactccatccgttctaatttataagaaaaaacactaattcatacttattaagaaaactaacacttagtgatttgaggta 4529300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 23873967 - 23874019
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23873967 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 23874019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 25990768 - 25990716
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25990768 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 25990716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 28017678 - 28017626
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28017678 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 28017626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 43656177 - 43656229
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43656177 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 43656229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 44875199 - 44875147
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44875199 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 44875147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 15285824 - 15285772
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15285824 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacata 15285772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 18036564 - 18036512
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18036564 gcaatttgcatttaattttactttggaaaagatgatttgtttgaaaaaacata 18036512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 18913486 - 18913538
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18913486 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 18913538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 28916655 - 28916707
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28916655 gcaatttgcatttaattttatattggaaaagatgatttgtttgaaaaaacata 28916707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 46949340 - 46949289
Alignment:
Q  237 caatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  46949340 caatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacata 46949289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 47996973 - 47996922
Alignment:
Q  237 caatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47996973 caatttgtatttaattttacattggaaaagatgatttgtttgaaaaaacata 47996922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 49924434 - 49924387
Alignment:
Q  241 ttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49924434 ttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 49924387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 86 - 148
Target Start/End: Complemental strand, 35884381 - 35884319
Alignment:
Q  86 actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttct 148  Q
    |||| |||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  35884381 actagttcacatttattaagaaaactaactcttagtaatttgaggtataattttttgtgttct 35884319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 4529207 - 4529155
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  4529207 gcaatttgcatttaattttacattggaaaaaatgatttatttgaaaaaacata 4529155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 18852243 - 18852191
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  18852243 gcaatttgcatttaattttacattggaaaaaataatttgtttgaaaaaacata 18852191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 26907229 - 26907281
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  26907229 gcaatttgcatttaattttacattgaaaaagataatttgtttgaaaaaacata 26907281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 31970449 - 31970501
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  31970449 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaagacata 31970501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 35941861 - 35941809
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  35941861 gcaatttgtatttaattttacattgaaaaagatgatttgtttgaaaaaacata 35941809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 36384131 - 36384016
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaa--actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||| ||||||||||||||||  || | ||||||||||||||||||  ||| || |  | ||||||| |||||||||||||||| |  ||    
T  36384131 tactccctccgtcccaatttataagcaaaaaatacaatttcacacttattaagaaagttaaaacattataatttgagatataattttttgtgttattttt 36384032  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||| ||||||||    
T  36384031 ggaataaatttcatgg 36384016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 38942581 - 38942633
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  38942581 gcaacttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacata 38942633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 40220076 - 40220025
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40220076 gcaatttgcatttaattttacattggaaaagat-atttgtttgaaaaaacata 40220025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 40935753 - 40935805
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  40935753 gcaacttgcatttaattttacattggaaaagatgatttgtttgaagaaacata 40935805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 40960614 - 40960666
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  40960614 gcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacata 40960666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 36037440 - 36037359
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaa--actaattcacacttattaagaaaactaacacttagtgatttgaggtata 134  Q
    |||||||||||||| ||||||||||||||||  || ||||||||||||||||||||||||| || | || ||||||| ||||    
T  36037440 tactccctccgtcccaatttataagcaaaaaacacaaattcacacttattaagaaaactaaaacatggtaatttgagttata 36037359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 6848446 - 6848494
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||    
T  6848446 gcaatttgcatttaattttagattggaaaagatgatttgttagaaaaaa 6848494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 9128063 - 9128015
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  9128063 gcaatttacatttaattttacattgaaaaagatgatttgtttgaaaaaa 9128015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 26479759 - 26479711
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  26479759 gcaattttcattgaattttacattggaaaagatgatttgtttgaaaaaa 26479711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 29488768 - 29488716
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||| || |||||||||||||||||||    
T  29488768 gcaacttgcatttaattttacattggaaaatattatttgtttgaaaaaacata 29488716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 39026386 - 39026438
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  39026386 gcaacttgcatttaattttacattggaaaatatgatttatttgaaaaaacata 39026438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 45358025 - 45358068
Alignment:
Q  245 atttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  45358025 atttaattttacattggaaaagatgatttgtttgaaataacata 45358068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 288
Target Start/End: Complemental strand, 15311192 - 15311146
Alignment:
Q  242 tgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  15311192 tgcatttaattttacattgaaaaagatgttttgtttgaaaaaacata 15311146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 24190675 - 24190566
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat-tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttg 153  Q
    |||||||||||||| || ||||||| ||||||| ||  |||||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || |||    
T  24190675 tactccctccgtcccaaattataagaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttg 24190576  T
Q  154 gaataagttt 163  Q
    ||| ||||||    
T  24190575 gaaaaagttt 24190566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 15959596 - 15959704
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgg 154  Q
    |||||||||||||| || ||||||| ||||||  || ||||| |||||||||||||||| || ||   |||||  ||||||||||||||||| || |||     
T  15959596 tactccctccgtcccaaattataagtaaaaaaaaaaatcacatttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctttga 15959695  T
Q  155 aataagttt 163  Q
    || ||||||    
T  15959696 aaaaagttt 15959704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 44148790 - 44148905
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||||||| ||||||||||||||  ||   |||||||||||| |||||||||  | ||   |||||  | ||| ||||||||||| || ||    
T  44148790 tactccctccgtcctaaattataagcaaaaaaacaaaaatcacacttattacgaaaactaaagcataagaatttgtagcatagttttttgtgttttcttt 44148889  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  44148890 ggaataagtttcatgg 44148905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 24728580 - 24728640
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaa 113  Q
    ||||||||||||||||| ||||||||||||||  ||   ||||||||||||||||||||||    
T  24728580 tactccctccgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 24728640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 165
Target Start/End: Complemental strand, 52985101 - 52985028
Alignment:
Q  92 tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttca 165  Q
    |||||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || |||||||||||||||    
T  52985101 tcacacttattaagaaaactaatacataagaatttggagtatagttttttgtgttttctttggaataagtttca 52985028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 35189221 - 35189173
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||| | |||||||||||||| ||||||| |||||||||||||||    
T  35189221 gcaatttgtagttaattttacattgaaaaagattatttgtttgaaaaaa 35189173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 43667259 - 43667367
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgg 154  Q
    |||||| |||||||||| |||||| |||||||  || ||||| |||||||||||| ||| || ||   |||| | ||||||||||||||||| || |||     
T  43667259 tactccatccgtcctaaattataaacaaaaaaaaaaatcacatttattaagaaaattaagacataagaatttaaagtataattttttgtgttttctttga 43667358  T
Q  155 aataagttt 163  Q
    || ||||||    
T  43667359 aaaaagttt 43667367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 3874974 - 3875029
Alignment:
Q  55 tactccctccgtcctaatttataag-caaaaaactaattcacacttattaagaaaa 109  Q
    ||||||||||||||||| ||||||| |||||||  || ||||||||||||||||||    
T  3874974 tactccctccgtcctaaattataagccaaaaaaaaaaatcacacttattaagaaaa 3875029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 32983127 - 32983229
Alignment:
Q  55 tactccctccgtcctaatttataagca-aaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttg 153  Q
    |||||||||| |||||| ||||||| | |||||  || |||||||||||||||||||||| || ||   ||| || ||||| ||||||||||| || |||    
T  32983127 tactccctccatcctaaattataagaagaaaaaaaaaatcacacttattaagaaaactaaaacataaaaattggaagtatagttttttgtgttttctttg 32983226  T
Q  154 gaa 156  Q
    |||    
T  32983227 gaa 32983229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 36383948 - 36383896
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgttt-gaaaaaacata 288  Q
    ||||||||||||||||||||| |||| ||||||||||| ||| |||||||||||    
T  36383948 gcaatttgcatttaattttactttgg-aaagatgatttttttagaaaaaacata 36383896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 25185445 - 25185492
Alignment:
Q  240 tttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||| | ||||||||||| |||| ||||||||||||||    
T  25185445 tttgcatttaatttttctttggaaaagataattt-tttgaaaaaacata 25185492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 25185609 - 25185577
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaa 86  Q
    |||||||||||||||||| ||||||||||||||    
T  25185609 gtactccctccgtcctaaattataagcaaaaaa 25185577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 39150811 - 39150866
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaac 110  Q
    ||||||||||||||| |  ||||||||||||||  || |||||||||||||||||||    
T  39150811 gtactccctccgtccaatattataagcaaaaaa-aaaatcacacttattaagaaaac 39150866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 35181395 - 35181279
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35181395 gtactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttactgatttgaggtataattttttgtgttctcct 35181296  T
Q  152 tggaataagtttcatgg 168  Q
    |||||||||||||||||    
T  35181295 tggaataagtttcatgg 35181279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 18206231 - 18206346
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18206231 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcctt 18206330  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  18206331 ggaataagtttcatgg 18206346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 43107817 - 43107932
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43107817 tactccctccgtcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 43107916  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  43107917 ggaataagtttcatgg 43107932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 19932967 - 19933082
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19932967 tactctctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctcctt 19933066  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  19933067 ggaataagtttcatgg 19933082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 42617875 - 42617758
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaa---ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 150  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  42617875 gtactccctccgtcctaatttataagcaaaaaaacactaattcacacttattaaaaaaactaacacttaatgatttgaggtataattttttgtgttctcc 42617776  T
Q  151 ttggaataagtttcatgg 168  Q
    ||||||||||||||||||    
T  42617775 ttggaataagtttcatgg 42617758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 3157638 - 3157523
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  3157638 tactccctccgtcctaatttataagcaaaaaacactaattcatacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcttt 3157539  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  3157538 gaaataagtttcatgg 3157523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 23106655 - 23106540
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23106655 tactccctccgtcttaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 23106556  T
Q  153 ggaataagtttcatgg 168  Q
      ||||||||||||||    
T  23106555 aaaataagtttcatgg 23106540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 41889374 - 41889258
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  41889374 gtactccctccgttctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgatgtataattttttgtattctcct 41889275  T
Q  152 tggaataagtttcatgg 168  Q
    || ||||||||||||||    
T  41889274 tgaaataagtttcatgg 41889258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 21654033 - 21654148
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||| ||||| ||| ||||||||||||||||||    
T  21654033 tactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttagtgacttgagatatcattttttgtgttctcctt 21654132  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  21654133 ggaataagtttcatgg 21654148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 9818670 - 9818555
Alignment:
Q  55 tactccctccgtcctaatttataag-caaaaa-actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  9818670 tactccctccgtcgtaatttataagtcaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctcctt 9818571  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||| ||||    
T  9818570 ggaataagttttatgg 9818555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 10720595 - 10720480
Alignment:
Q  55 tactccctccgtcctaatttataag-caaaaa-actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  10720595 tactccctccgtcgtaatttataagtcaaaaacactaattcacacttattaagaaaactaacatttagtgatttgaggtataattttttatgttctcctt 10720496  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||| ||||    
T  10720495 ggaataagttttatgg 10720480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 7989219 - 7989335
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac---taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||||||||| ||| |||||||| ||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7989219 tactccctccgttctattttataagtaaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 7989318  T
Q  152 tggaataagtttcatgg 168  Q
    |||||||| ||||||||    
T  7989319 tggaataaatttcatgg 7989335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 22111248 - 22111348
Alignment:
Q  62 tccgtcctaatttataagcaaaaaa---ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 158  Q
    ||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22111248 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 22111347  T
Q  159 a 159  Q
    |    
T  22111348 a 22111348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 40583341 - 40583241
Alignment:
Q  62 tccgtcctaatttataagcaaaaaa---ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 158  Q
    ||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40583341 tccgtcctaatttataagcaaaataacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaata 40583242  T
Q  159 a 159  Q
    |    
T  40583241 a 40583241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 55 - 165
Target Start/End: Complemental strand, 44600648 - 44600536
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||| ||||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44600648 tacttcctccgttctaatttataagcaaaaaatactaattcacatttattaagaaaactaacacttagcgatttgaggtataattttttgtgttctcctt 44600549  T
Q  153 ggaataagtttca 165  Q
     ||||||||||||    
T  44600548 agaataagtttca 44600536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 47383608 - 47383493
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaact--aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||   ||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  47383608 tactccctccgtcctaatttataagcaaaaaacacaaattcacacatattaagaaaactaacacttaatgatttgagatataattttttgtgttctcctt 47383509  T
Q  153 ggaataagtttcatgg 168  Q
      ||||||||||||||    
T  47383508 aaaataagtttcatgg 47383493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 48879591 - 48879480
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||| ||||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  48879591 gtactccatccgttctaatttataagcaaaaaacactaatttacacttattaagaaaactaacacttaatgatttgaggtataattttttgtattctcct 48879492  T
Q  152 tggaataagttt 163  Q
    ||||||||||||    
T  48879491 tggaataagttt 48879480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 40560584 - 40560474
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||| ||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||    
T  40560584 tactccctccgtcctaatttataagcaaaaaacattaatttacacttattaaaaaaactaacacttaataatttgaggtataattttttgtgttctcctt 40560485  T
Q  153 ggaataagttt 163  Q
    | |||||||||    
T  40560484 gaaataagttt 40560474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 41815618 - 41815720
Alignment:
Q  68 ctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttca 165  Q
    |||||||||||||||||||   ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  41815618 ctaatttataagcaaaaaataataattgacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttta 41815717  T
Q  166 tgg 168  Q
    |||    
T  41815718 tgg 41815720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 32491019 - 32491134
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||| |||| ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  32491019 tactctctccatcctaatttataagcaaaaaacactaattcacatttattaagaaaactaacacttggtgatttgatgtataattttttgtgttctcctt 32491118  T
Q  153 ggaataagtttcatgg 168  Q
      ||||||||||||||    
T  32491119 ataataagtttcatgg 32491134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 41890162 - 41890270
Alignment:
Q  61 ctccgtcctaatttataagcaaaaa-actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 159  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||| |||||    
T  41890162 ctccgtcctaatttataagaaaaaacactaattcaaacttattaagaaaactaacatttaatgatttggggtataattttttgtgttctccttgaaataa 41890261  T
Q  160 gtttcatgg 168  Q
    |||||||||    
T  41890262 gtttcatgg 41890270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 168
Target Start/End: Complemental strand, 23731761 - 23731647
Alignment:
Q  58 tccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaacta--acacttagtgatttgaggtataattttttgtgttctccttg 153  Q
    |||||||||||||||||||||  |||||||  ||||||||| |||||||||||||||  |||||||||||||||| |||| |||||||||||||||||||    
T  23731761 tccctccgtcctaatttataaaaaaaaaacgctaattcacatttattaagaaaactataacacttagtgatttgatgtatgattttttgtgttctccttg 23731662  T
Q  154 gaataagtttcatgg 168  Q
    |||||||||||||||    
T  23731661 gaataagtttcatgg 23731647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 19964151 - 19964221
Alignment:
Q  98 ttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19964151 ttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataagtttcatgg 19964221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 45599109 - 45598991
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac----taattcacacttattaagaaaactaacacttagtgatttgaggtataatt-ttttgtgttctc 149  Q
    |||||| ||||||||||||||||| |||||||     |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| || ||    
T  45599109 tactccttccgtcctaatttataaacaaaaaaaacagtaattcgcacttattaagaaaactaacacttagtgatttgaggtataatttttttgtattttc 45599010  T
Q  150 cttggaataagtttcatgg 168  Q
    |||| ||||||||||||||    
T  45599009 cttgaaataagtttcatgg 45598991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 34808384 - 34808306
Alignment:
Q  90 attcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  34808384 attcacacttagtaagaaaactaatacttagtgatttgaggtataattttttgtgttcttcttggaaaaagtttcatgg 34808306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 168
Target Start/End: Complemental strand, 36576585 - 36576505
Alignment:
Q  86 actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  36576585 actaattcacacttat-aagaaaactaacacttagtgatttgaggtataattttttgt-ttctccttagaataagtttcatgg 36576505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 58 - 168
Target Start/End: Original strand, 48937805 - 48937916
Alignment:
Q  58 tccctccgtcctaatttataagcaaaaaact--aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgga 155  Q
    |||||||||| |||||||||| ||||||||   |||||| |||||||||||||||  |||||||||| || |||||||||||||||||||||||||||||    
T  48937805 tccctccgtcttaatttataaacaaaaaacacaaattcatacttattaagaaaacatacacttagtggtt-gaggtataattttttgtgttctccttgga 48937903  T
Q  156 ataagtttcatgg 168  Q
    |||||||| ||||    
T  48937904 ataagttttatgg 48937916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 35084012 - 35084126
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa---ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||||||||||| |||||||||||||||||   | |||||||||||| |||||||||||| ||  ||| ||||||| |||| ||||||||||||| ||    
T  35084012 tactccctccgtcccaatttataagcaaaaaaacacaaattcacacttaataagaaaactaaaacacagtaatttgagttatagttttttgtgttcttct 35084111  T
Q  152 tggaataagtttcat 166  Q
    || ||||||||||||    
T  35084112 tgaaataagtttcat 35084126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 166
Target Start/End: Original strand, 29235981 - 29236093
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaa--actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||  || |||||||||| |||||||||| | | || ||||  |||||||||||||||||||| ||||  ||    
T  29235981 tactccctccgtcctaatttataagcaaaaaacacaaattcacactcattaagaaaa-tgaaacatagtagtttgaggtataattttttgtattcttttt 29236079  T
Q  153 ggaataagtttcat 166  Q
    ||||||||||||||    
T  29236080 ggaataagtttcat 29236093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 23106472 - 23106420
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23106472 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 23106420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 45598923 - 45598871
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45598923 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 45598871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 19933150 - 19933202
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19933150 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 19933202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 19964289 - 19964341
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19964289 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 19964341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 23731579 - 23731527
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23731579 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 23731527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 35181211 - 35181159
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35181211 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacata 35181159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 40560401 - 40560349
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40560401 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 40560349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 43108000 - 43108048
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43108000 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 43108048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 47383425 - 47383373
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  47383425 gcaatttacatttaattttacattggaaaagatgatttgtttgaaaaaacata 47383373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 21654218 - 21654268
Alignment:
Q  238 aatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21654218 aatttgcatttaattttacattggaaaaggtgatttgtttgaaaaaacata 21654268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 3157455 - 3157403
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  3157455 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaatacata 3157403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 22111425 - 22111477
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  22111425 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacata 22111477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 32491202 - 32491254
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32491202 gcaacttgcatttaattttacattcgaaaagatgatttgtttgaaaaaacata 32491254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 34808238 - 34808186
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  34808238 gcaatttgcatttaattttacgttgaaaaagatgatttgtttgaaaaaacata 34808186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 36576437 - 36576385
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36576437 gcaacttgcatttaattttacattggaaaagatgatttatttgaaaaaacata 36576385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 40583164 - 40583112
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  40583164 gcaatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaacata 40583112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 41889190 - 41889138
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  41889190 gcaatttgctttgaattttacattggaaaagatgatttgtttgaaaaaacata 41889138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 48879407 - 48879355
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  48879407 gcaatttgcatttaattttacattgaaaaagatgatttttttgaaaaaacata 48879355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 48937984 - 48938032
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  48937984 gcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaa 48938032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 48943010 - 48943058
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  48943010 gcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaa 48943058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 241 - 288
Target Start/End: Original strand, 18206419 - 18206466
Alignment:
Q  241 ttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  18206419 ttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacata 18206466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 40594020 - 40593930
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaa--actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgt 143  Q
    |||||||||||||||||||||||||||||||  || |||||||| ||||||||||||  || || | ||| |||||| |||||||||||||    
T  40594020 tactccctccgtcctaatttataagcaaaaaatacaaattcacatttattaagaaaaaaaaaacatggtggtttgagatataattttttgt 40593930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 9818491 - 9818450
Alignment:
Q  243 gcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9818491 gcatttaattttacattggaaaagatgatttgtttgaaaaaa 9818450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 243 - 284
Target Start/End: Complemental strand, 10720416 - 10720375
Alignment:
Q  243 gcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10720416 gcatttaattttacattggaaaagatgatttgtttgaaaaaa 10720375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 30082372 - 30082320
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||| ||||||    
T  30082372 gcaatttgcatttaattttactttggaaaagatgatttttttgaaataacata 30082320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 42617690 - 42617638
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||| || |||||||||||||||||||    
T  42617690 gcaatttgcatttaattttacattgaaaaaaataatttgtttgaaaaaacata 42617638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 44600465 - 44600413
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  44600465 gcaacttgcatttaattttacactggaaaagatgatttatttgaaaaaacata 44600413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 41890339 - 41890385
Alignment:
Q  238 aatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  41890339 aatttgcatttaattttacattaaaaaagatgatttgtttgaaaaaa 41890385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 33153242 - 33153126
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaact--aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||| ||||||||| |||||||||| ||||||    |||||||||||||||| ||||| || || || |  ||||| ||||||||||||||||||| ||    
T  33153242 gtacttcctccgtcccaatttataagtaaaaaatataaattcacacttattaaaaaaacaaaaacataatagtttgaagtataattttttgtgttcttct 33153143  T
Q  152 tggaataagtttcatgg 168  Q
    || ||||| ||| ||||    
T  33153142 tgaaataaattttatgg 33153126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 28843437 - 28843545
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgg 154  Q
    |||||||||||||| ||||||| || | ||||  ||||||| |||||||| | ||  || || ||||  ||||||||||||||||||||| | | |||||    
T  28843437 tactccctccgtcccaatttattagaataaaataaattcacgcttattaaaacaataaaaacatagtagtttgaggtataattttttgtgattttcttgg 28843536  T
Q  155 aataagttt 163  Q
    |||||||||    
T  28843537 aataagttt 28843545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 30082553 - 30082445
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaact--aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||| ||| |||| |||||||| |||||||||   |||||||||||||||||||||| || || ||||  ||||||||||||  ||||||||| | |||    
T  30082553 tactctctctgtcccaatttataggcaaaaaacacaaattcacacttattaagaaaacaaaaacatagtagtttgaggtataa--ttttgtgttattctt 30082456  T
Q  153 ggaataagttt 163  Q
    | |||||||||    
T  30082455 gaaataagttt 30082445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 41815796 - 41815840
Alignment:
Q  244 catttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||    
T  41815796 catttaattttacattggaaaatatgatttatttgaaaaaacata 41815840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 25737580 - 25737690
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||| || ||||||||||||||  ||   |||||||||||||||||||||| || ||   ||||| |||||| |||| |||||| || ||    
T  25737580 tactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataaaaatttggggtatagttttgtgtgttttcttt 25737679  T
Q  153 ggaataagttt 163  Q
    |||| ||||||    
T  25737680 ggaaaaagttt 25737690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 35084196 - 35084248
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||| ||||||| |||||||| | |||| |||||||    
T  35084196 gcaatttgcatttaattttactttggaaaggatgatttttatgaagaaacata 35084248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 2633318 - 2633389
Alignment:
Q  81 aaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||| |||||||| |||||||||||||||| || || | |||| ||||| || |||| |||||||||||    
T  2633318 aaaaaaccaattcacatttattaagaaaactaaaacataataattttaggtaaaacttttggtgttctcctt 2633389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 18102737 - 18102627
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||| |||| || ||||||||||||||  ||   |||||||||||||||||||||| || ||   |||||  ||||||||||||||||| || ||    
T  18102737 tactccctctgtcccaaattataagcaaaaaaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttcttt 18102638  T
Q  153 ggaataagttt 163  Q
    | || ||||||    
T  18102637 gaaaaaagttt 18102627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 46760210 - 46760320
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||| || ||||||||||||||  ||   |||||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || ||    
T  46760210 tactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 46760309  T
Q  153 ggaataagttt 163  Q
    | || ||||||    
T  46760310 gaaaaaagttt 46760320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 109
Target Start/End: Original strand, 18800686 - 18800735
Alignment:
Q  62 tccgtcctaatttataagcaaaaa--actaattcacacttattaagaaaa 109  Q
    ||||||| ||||||||||||||||  || |||||||||||||||||||||    
T  18800686 tccgtcccaatttataagcaaaaaatacaaattcacacttattaagaaaa 18800735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 35923455 - 35923398
Alignment:
Q  58 tccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaa 113  Q
    |||||||||||||| ||||||| |||||| |||   ||||||||||||||||||||||    
T  35923455 tccctccgtcctaaattataagtaaaaaaataaaaatcacacttattaagaaaactaa 35923398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 14806076 - 14806016
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaa 113  Q
    |||||||||||||| || ||||||||||||||  ||   ||||||||||||||||||||||    
T  14806076 tactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 14806016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 15253070 - 15253010
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaa 113  Q
    |||||||||||||| || ||||||||||||||  ||   ||||||||||||||||||||||    
T  15253070 tactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaa 15253010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 22632296 - 22632236
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaa 113  Q
    |||||||||||||| || ||||||| |||||| |||   ||||||||||||||||||||||    
T  22632296 tactccctccgtcccaaattataagtaaaaaaataaaaatcacacttattaagaaaactaa 22632236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 281
Target Start/End: Complemental strand, 33153058 - 33153013
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaa 281  Q
    ||||||||||||||||||||| ||| ||||||| |||| |||||||    
T  33153058 gcaatttgcatttaattttactttgaaaaagataatttttttgaaa 33153013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 39348807 - 39348758
Alignment:
Q  237 caatttgcatttaattttacattggaaaagatgatttgtttgaaaaaaca 286  Q
    |||||||||||||||||||| ||||||||||| | || ||||||| ||||    
T  39348807 caatttgcatttaattttactttggaaaagattaattttttgaaacaaca 39348758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 18800869 - 18800921
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||| ||||||||||||| ||| ||||||||||||  |||||| ||||||    
T  18800869 gcaatttacatttaattttactttgaaaaagatgattttcttgaaataacata 18800921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 167
Target Start/End: Complemental strand, 28608560 - 28608461
Alignment:
Q  70 aatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatg 167  Q
    |||||||||| ||||||  | |||||||| || |||||||||| || || ||||  || || |||||||||||| || ||| |||| |||||||||||||    
T  28608560 aatttataagaaaaaaatacaaattcacattttttaagaaaacaaaaacatagtagttagaagtataattttttatggtcttcttgaaataagtttcatg 28608461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 17721763 - 17721878
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17721763 tactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctcctt 17721862  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  17721863 ggaataagtttcatgg 17721878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 30766649 - 30766534
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30766649 tactcccttcgtcctaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcctt 30766550  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  30766549 ggaataagtttcatgg 30766534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 10228115 - 10228002
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10228115 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctcctt 10228016  T
Q  153 ggaataagtttcat 166  Q
    | ||||||||||||    
T  10228015 gaaataagtttcat 10228002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 5121410 - 5121525
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  5121410 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaatgatttgaggtatagttttttgtgttctcctt 5121509  T
Q  153 ggaataagtttcatgg 168  Q
      ||||||||||||||    
T  5121510 aaaataagtttcatgg 5121525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 374303 - 374187
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||||||||||||||||||||||||||||||  ||||||||| ||||||| |||||||| ||||||| |||||||||||||||||||||||||||||    
T  374303 gtactccctccgtcctaatttataagcaaaaaacactaattcacatttattaaaaaaactaatacttagttatttgaggtataattttttgtgttctcct 374204  T
Q  152 tggaataagtttcatgg 168  Q
    | |||||||||||||||    
T  374203 tagaataagtttcatgg 374187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 12278909 - 12278794
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaact--aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||| || |||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12278909 tactcacttcgtcttaatttataagcaaaaaacatcaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 12278810  T
Q  153 ggaataagtttcatgg 168  Q
     |||||||||||||||    
T  12278809 agaataagtttcatgg 12278794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 30949338 - 30949223
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||| |||||||||||||||||||||  |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||    
T  30949338 tactccctccatcctaatttataagcaaaaaatactaattcacacttattaacaaaactaacatttattgatttgaggtataattttttgtgttctcctt 30949239  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  30949238 gaaataagtttcatgg 30949223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 31887073 - 31887190
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac---taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 150  Q
    ||||||||||||| |||||||||||||||||||    ||||| ||||||||||| |||||||||||| ||||||||||  ||| |||||||||||| |      
T  31887073 gtactccctccgttctaatttataagcaaaaaaacattaatttacacttattaataaaactaacactcagtgatttgatatatgattttttgtgtttttt 31887172  T
Q  151 ttggaataagtttcatgg 168  Q
    ||  ||||||||||||||    
T  31887173 ttttaataagtttcatgg 31887190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 17598450 - 17598381
Alignment:
Q  99 tattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  17598450 tattaagaaaattaacacttaatgatttgaggtataattttttgtgttctctttggaataaattttatgg 17598381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 17598313 - 17598261
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17598313 gcaatttgcatttaattttacattggaaaagaagatttgtttgaaaaaacata 17598261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 30949155 - 30949103
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  30949155 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 30949103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 168
Target Start/End: Complemental strand, 21964145 - 21964045
Alignment:
Q  70 aatttataagcaaaaaact--aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatg 167  Q
    ||||||||||||||||| |  |||||||||||| ||| |||||||| || |||| ||| ||| ||||||||||||||||||||||  ||||||||| |||    
T  21964145 aatttataagcaaaaaaatccaattcacacttactaataaaactaaaacatagtaattagagatataattttttgtgttctccttaaaataagttttatg 21964046  T
Q  168 g 168  Q
    |    
T  21964045 g 21964045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 70 - 168
Target Start/End: Original strand, 32882660 - 32882760
Alignment:
Q  70 aatttataagcaaaaaact--aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatg 167  Q
    ||||||||||||||||| |  |||||||||||||||||||||| || || | ||  ||||||||||||||||||||||||| | |  |||||||||||||    
T  32882660 aatttataagcaaaaaattcaaattcacacttattaagaaaacaaaaacattgtagtttgaggtataattttttgtgttcttcataaaataagtttcatg 32882759  T
Q  168 g 168  Q
    |    
T  32882760 g 32882760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 374119 - 374067
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  374119 gcaatttgcatttaattttacatcggaaaatatgatttgtttgaaaaaacata 374067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 10227932 - 10227880
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  10227932 gcaatttgcatttaattttatattggaaaagatgatttgtttggaaaaacata 10227880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 12278726 - 12278674
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  12278726 gcaatttgcatttaattttacatttgaaaaaatgatttgtttgaaaaaacata 12278674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 17721946 - 17721998
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  17721946 gcaatttgcatttaattttacattggaaaatatgatttctttgaaaaaacata 17721998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 31887258 - 31887306
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31887258 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 31887306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 33756276 - 33756224
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  33756276 gcaatttgcatttaattttacattgaaaaaaatgatttgtttgaaaaaacata 33756224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 7274829 - 7274944
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||||||| ||||||||||||||  ||   |||||||||||||||||||||| || ||   |||||  | ||| |||||||| || || ||    
T  7274829 tactccctccgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttgtagcatagttttttgtattttcttt 7274928  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  7274929 ggaataagtttcatgg 7274944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 17599515 - 17599464
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaa 104  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  17599515 tactccctccgtcctaatttataagcaaaaaacattaattcacacttattaa 17599464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 30766466 - 30766414
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||| || |||| ||||||||||||||    
T  30766466 gcaatttgcatttaattttacattgaaaaaaataatttctttgaaaaaacata 30766414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 21542625 - 21542515
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||| || ||||||||||||||  ||   |||||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || ||    
T  21542625 tactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 21542526  T
Q  153 ggaataagttt 163  Q
    |||| ||||||    
T  21542525 ggaaaaagttt 21542515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 35129007 - 35129118
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||||||||||  || ||||||||||||||  ||   |||||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || |    
T  35129007 gtactccctccgtctcaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctt 35129106  T
Q  152 tggaataagttt 163  Q
    ||||| ||||||    
T  35129107 tggaaaaagttt 35129118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 11082199 - 11082309
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||| || ||||||||||||||  ||   | |||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || ||    
T  11082199 tactccctccgtcccaaattataagcaaaaaaacaaaaataacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttt 11082298  T
Q  153 ggaataagttt 163  Q
    |||| ||||||    
T  11082299 ggaaaaagttt 11082309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 286
Target Start/End: Original strand, 32882833 - 32882880
Alignment:
Q  239 atttgcatttaattttacattggaaaagatgatttgtttgaaaaaaca 286  Q
    |||||||||||||||||| ||||||||||||| || ||||||| ||||    
T  32882833 atttgcatttaattttactttggaaaagatgacttttttgaaataaca 32882880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 163
Target Start/End: Complemental strand, 33756396 - 33756349
Alignment:
Q  116 cttagtgatttgaggtataattttttgtgttctccttggaataagttt 163  Q
    |||||||||||||||||| ||||||| ||||||||||| | |||||||    
T  33756396 cttagtgatttgaggtattattttttttgttctccttgaagtaagttt 33756349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 4e-50; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 25962402 - 25962517
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25962402 tactccctccgtcctaatttataagcaaaaaagaataattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 25962501  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  25962502 ggaataagtttcatgg 25962517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 31316755 - 31316870
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31316755 tactccctccgtcctaatttataagcaaaaaacactaattcacagttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 31316854  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  31316855 ggaataagtttcatgg 31316870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 8145966 - 8146082
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8145966 gtactccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacactcagtgatttgaggtataattttttgtgttctcct 8146065  T
Q  152 tggaataagtttcatgg 168  Q
    || ||||||||||||||    
T  8146066 tgaaataagtttcatgg 8146082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 58 - 164
Target Start/End: Original strand, 8541521 - 8541629
Alignment:
Q  58 tccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgga 155  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  8541521 tccctccgtcctaatttataagcaaaaaacattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtattcttcttgga 8541620  T
Q  156 ataagtttc 164  Q
    |||||||||    
T  8541621 ataagtttc 8541629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 20915064 - 20914949
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||||||| || |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  20915064 tactccctctgtgctaatttataagcaaaaaatactaattcacacttattaagaaaactaacacttagtgatttaagatataattttttgtgttctcctt 20914965  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  20914964 ggaataagtttcatgg 20914949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 35462673 - 35462787
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  35462673 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgttttctcctt 35462772  T
Q  153 ggaataagtttcatgg 168  Q
    || |||||||||||||    
T  35462773 gg-ataagtttcatgg 35462787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 16286037 - 16286151
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||| |||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  16286037 tacttcctccgtcctaatttataagtaaaaaacattaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcttt 16286136  T
Q  153 ggaataagtttcatg 167  Q
    |||||||||||||||    
T  16286137 ggaataagtttcatg 16286151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 24432354 - 24432469
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||| |||||||| ||||||||||  ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24432354 tacttcctccgtcttaatttataataaaaaaagattaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 24432453  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  24432454 ggaataagtttcatgg 24432469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 12639093 - 12638979
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaa-actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttg 153  Q
    |||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  12639093 tacttcctccgtcctaatttataagaaaaaacactaattcacacttattaagaaaactaacatttagttatttgaggtataattttttgtgttctccttg 12638994  T
Q  154 gaataagtttcatgg 168  Q
    |||||| ||| ||||    
T  12638993 gaataaattttatgg 12638979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 13146934 - 13146819
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||| ||||| |||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13146934 tactccatccgttctaatttataagcaaaaaatactaattcatacttattatgaaaactaacacttagtgatttgaggtataattttttgtgttctcttt 13146835  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||| ||||    
T  13146834 ggaataagttttatgg 13146819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 30086500 - 30086617
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac---taattcacacttattaagaaaactaacacttagtgatttgaggtataatttttt-gtgttctcc 150  Q
    |||||||||||| |||||||||||||||||||    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||    
T  30086500 tactccctccgttctaatttataagcaaaaaaacattaattcacacttattaagaaaactaacatttagtaatttgaggtataattttttcgtgttctcc 30086599  T
Q  151 ttggaataagtttcatgg 168  Q
    ||| ||||||||||||||    
T  30086600 ttgaaataagtttcatgg 30086617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 31690574 - 31690684
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||| |||||| ||||||||||||||||||  ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||    
T  31690574 tactccttccgtcttaatttataagcaaaaaatactaattcacacttattaagaaaattaatacttagtgatttgaggtataattttttgtgttcttctt 31690673  T
Q  153 ggaataagttt 163  Q
    ||||| |||||    
T  31690674 ggaatgagttt 31690684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 52 - 168
Target Start/End: Complemental strand, 42365243 - 42365125
Alignment:
Q  52 tggtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctc 149  Q
    ||||||||||||||| |||||||||||| |||||||  ||||||| | |||||||||||||||| |||||||||||||||||| |||||||||||||||     
T  42365243 tggtactccctccgttctaatttataagtaaaaaacactaattcatatttattaagaaaactaatacttagtgatttgaggtacaattttttgtgttctt 42365144  T
Q  150 cttggaataagtttcatgg 168  Q
     ||||||||||||||||||    
T  42365143 attggaataagtttcatgg 42365125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 37066212 - 37066288
Alignment:
Q  88 taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttc 164  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||    
T  37066212 taattcacacttattaagaaaactaacacttaatgatttgaggtataattttttgtattcttcttggaataagtttc 37066288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 36413890 - 36414005
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaact--aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||| ||||||||   |||||||||||||||||||||| || || ||||  |||||| |||||||||||||||| |  ||    
T  36413890 tactccctccgtcctaatttataaacaaaaaacacaaattcacacttattaagaaaacaaaaacatagtagtttgagatataattttttgtgtttttatt 36413989  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  36413990 ggaataagtttcatgg 36414005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 8146150 - 8146202
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8146150 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 8146202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 8541701 - 8541753
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8541701 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 8541753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 31690757 - 31690809
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31690757 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 31690809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 13146751 - 13146699
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13146751 gcaatttacatttaattttacattggaaaagatgatttgtttgaaaaaacata 13146699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 20914881 - 20914829
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20914881 gcaacttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 20914829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 24439777 - 24439662
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaa--ttcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    ||||| |||||||||||||||||||||||||||  |  |||||||||||||| |||  ||| || |  | ||||||| |||||||||||||||| | |||    
T  24439777 tactcactccgtcctaatttataagcaaaaaacacaatttcacacttattaaaaaagttaaaacattataatttgagatataattttttgtgttattctt 24439678  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  24439677 ggaataagtttcatgg 24439662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 30086685 - 30086737
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30086685 gcaatttgtatttaattttacattggaaaagatgatttgtttgaaaaaacata 30086737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 42365057 - 42365009
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42365057 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 42365009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 31316938 - 31316990
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  31316938 gcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacata 31316990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 37066360 - 37066408
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37066360 gcaatttgcatttaattttacattggaaaagattatttgtttgaaaaaa 37066408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 42273852 - 42273744
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgg 154  Q
    |||||||||||||| || ||||||||||||||  || |||||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || ||||    
T  42273852 tactccctccgtcccaaattataagcaaaaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttctttgg 42273753  T
Q  155 aataagttt 163  Q
    || ||||||    
T  42273752 aaaaagttt 42273744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 241 - 288
Target Start/End: Original strand, 25962594 - 25962641
Alignment:
Q  241 ttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||    
T  25962594 ttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacata 25962641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 8144139 - 8144026
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaact--aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||| |||||||||||||||||| ||||| |   |||  |||||||||||||||| ||| || || | ||||||||||||| ||||||| || | |||    
T  8144139 tactccatccgtcctaatttataagaaaaaaccatcaatgtacacttattaagaaaaataaaacatattaatttgaggtataaatttttgtatttttctt 8144040  T
Q  153 ggaataagtttcat 166  Q
    ||||||||||||||    
T  8144039 ggaataagtttcat 8144026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 35462857 - 35462907
Alignment:
Q  238 aatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  35462857 aatttgcatttaattttacattgaaaaagatgttttgtttgaaaaaacata 35462907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 12638911 - 12638859
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||| || |||||||||||||||||||    
T  12638911 gcaatttgcatttaattttacattgaaaaaaataatttgtttgaaaaaacata 12638859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 16286220 - 16286272
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  16286220 gcaacttgcatttaattttacattgaaaaagataatttgtttgaaaaaacata 16286272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 24432537 - 24432585
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  24432537 gcaacttgcatttaattttacattggaaaagatgatttatttgaaaaaa 24432585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 17825337 - 17825383
Alignment:
Q  238 aatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  17825337 aatttgcatttaattttacattgaaaaatatgatttgtttgaaaaaa 17825383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 20644222 - 20644111
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat---tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||||||||||| || ||||||||||||||  ||    |||||||||||||||||||||| || ||   |||||  ||||||||||||||||| || |    
T  20644222 tactccctccgtcccaaattataagcaaaaaaaaaaaaaatcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgttttctt 20644123  T
Q  152 tggaataagttt 163  Q
    ||||| ||||||    
T  20644122 tggaaaaagttt 20644111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 2002270 - 2002322
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||  |||||||||||||||| ||||||| ||||||    
T  2002270 gcaatttgcatttaattttattttggaaaagatgatttttttgaaataacata 2002322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 25841071 - 25840956
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||| |||||||| ||||||||||||||  ||   ||||||||||||||||||||||  | ||   |||||  | ||| ||||||||||| || ||    
T  25841071 tactcccttcgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaagcataaaaatttgtagcatagttttttgtgttttcttt 25840972  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  25840971 ggaataagtttcatgg 25840956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 54 - 146
Target Start/End: Original strand, 37562717 - 37562808
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgtt 146  Q
    ||||||||||||||| || ||||||||||||||  || |||||||||||||||||||||| || ||   |||||  ||||| |||||||||||    
T  37562717 gtactccctccgtcccaaattataagcaaaaaa-aaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgtt 37562808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 11261839 - 11261948
Alignment:
Q  55 tactccctccgtcctaatttataagc-aaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttg 153  Q
    |||||| |||||||||| |||||||| ||||||  || |||||||||||||| |||||||||| |    |||||  ||||||||||||||||| || |||    
T  11261839 tactccttccgtcctaaattataagcaaaaaaaaaaaatcacacttattaagtaaactaacacatgagaatttggagtataattttttgtgttttctttg 11261938  T
Q  154 gaataagttt 163  Q
     || ||||||    
T  11261939 aaaaaagttt 11261948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 12792741 - 12792800
Alignment:
Q  55 tactccctccgtcctaatttataagc-aaaaaactaattcacacttattaagaaaactaa 113  Q
    ||||||||||||||||| |||||||| ||||||  || ||||||||||||| ||||||||    
T  12792741 tactccctccgtcctaaattataagcaaaaaaaaaaaatcacacttattaaaaaaactaa 12792800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 43589921 - 43590026
Alignment:
Q  60 cctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaat 157  Q
    |||||||||||| ||||||||||||||  ||   |||||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || || |||     
T  43589921 cctccgtcctaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataagaatttggagtatagttttttgtgttttcttttgaaa 43590020  T
Q  158 aagttt 163  Q
    ||||||    
T  43590021 aagttt 43590026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 20039273 - 20039216
Alignment:
Q  89 aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgtt 146  Q
    ||||||||||||||||||||||||| || ||   |||||  |||||||||||||||||    
T  20039273 aattcacacttattaagaaaactaaaacataagaatttggagtataattttttgtgtt 20039216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 24439594 - 24439542
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgt-ttgaaaaaacata 288  Q
    ||||||||||||||||||||| |||| ||||||||||| | |||||||||||||    
T  24439594 gcaatttgcatttaattttactttgg-aaagatgatttttgttgaaaaaacata 24439542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 34425533 - 34425427
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgg 154  Q
    |||||||||||||  || ||||||| ||||||  ||  ||||||||||||||||||||| || ||   |||||| ||||| ||||||||||| || |||     
T  34425533 tactccctccgtctcaaattataaggaaaaaaaaaa--cacacttattaagaaaactaaaacataagaatttgaagtatagttttttgtgttttctttga 34425436  T
Q  155 aataagttt 163  Q
    || ||||||    
T  34425435 aaaaagttt 34425427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 8143956 - 8143904
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||  |||||||||||| ||| |||||| ||||| ||||||||||||||    
T  8143956 gcaatttatatttaattttactttgaaaaagaagatttatttgaaaaaacata 8143904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 21654449 - 21654334
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21654449 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 21654350  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  21654349 gaaataagtttcatgg 21654334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 26641028 - 26641143
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26641028 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcctt 26641127  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  26641128 ggaataagtttcatgg 26641143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 32322155 - 32322270
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32322155 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaattaacacttagtgatttgaggtataattttttgtgttctcctt 32322254  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  32322255 ggaataagtttcatgg 32322270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 55400942 - 55400827
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  55400942 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcttt 55400843  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  55400842 ggaataagtttcatgg 55400827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 34022803 - 34022688
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34022803 tactcccttcgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaatacttagtgatttgaggtataattttttgtgttctcctt 34022704  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||| ||||    
T  34022703 gaaataagttttatgg 34022688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 53020387 - 53020272
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  53020387 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacatttagtgatttgagttataattttttgtgttcttctt 53020288  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||| ||||    
T  53020287 ggaataagttttatgg 53020272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 31126417 - 31126301
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||||||| ||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31126417 gtactccctctgttttaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 31126318  T
Q  152 tggaataagtttcatgg 168  Q
    || ||||||||| ||||    
T  31126317 tgaaataagttttatgg 31126301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 46295992 - 46296108
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaa--ctaattcacacttattaagaaaactaacacttagtgatttgaggtataa-ttttttgtgttctcct 151  Q
    ||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  46295992 tactccctccgtcctaatttataagtaaaaaatactaattcacacttattaagaaaactaacggttagtgatttgaggtataatttttttgtgttctcct 46296091  T
Q  152 tggaataagtttcatgg 168  Q
    |||||||||||||||||    
T  46296092 tggaataagtttcatgg 46296108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 46580732 - 46580630
Alignment:
Q  62 tccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataa 159  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46580732 tccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgaaataa 46580633  T
Q  160 gtt 162  Q
    |||    
T  46580632 gtt 46580630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 45347637 - 45347744
Alignment:
Q  63 ccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataag 160  Q
    ||||||||||||||||| |||||||  ||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45347637 ccgtcctaatttataagtaaaaaacactaattcatatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttctccttggaataag 45347736  T
Q  161 tttcatgg 168  Q
    ||||||||    
T  45347737 tttcatgg 45347744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 37323999 - 37324109
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||    
T  37323999 tactccctccgttctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgagatataattttttgtgttatcttt 37324098  T
Q  153 ggaataagttt 163  Q
    | |||||||||    
T  37324099 gaaataagttt 37324109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 49068256 - 49068140
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||| ||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  49068256 gtactctctccgtcctaatttataagcaaaaaatattaattcacatttattaagaaaactaacacttagtgatttgagatataattttttgtgttctcct 49068157  T
Q  152 tggaataagtttcatgg 168  Q
       ||||||||||||||    
T  49068156 ataaataagtttcatgg 49068140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 51426823 - 51426708
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||| || |||||||| |||||||||| |||||||||||||||||||||||||||||||| |||    
T  51426823 tactccctccgtcctaatttataagcaaaaaacactaatttacgcttattaaaaaaactaacatttagtgatttgaggtataattttttgtgttcttctt 51426724  T
Q  153 ggaataagtttcatgg 168  Q
     |||||| ||||||||    
T  51426723 agaataaatttcatgg 51426708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 28793362 - 28793251
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgg 154  Q
    ||||||||||||||||||   |||  |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  28793362 tactccctccgtcctaataagtaa--aaaataataattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttatccttgg 28793265  T
Q  155 aataagtttcatgg 168  Q
    ||||| ||||||||    
T  28793264 aataaatttcatgg 28793251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 16739081 - 16739191
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||     | |||||||||||||||| |||||||||||||    
T  16739081 tactccctccgtcctaatttataagccaaaaacactaattcacacttattaagaaaactaaca-----ttatttgaggtataatttgttgtgttctcctt 16739175  T
Q  153 ggaataagtttcatgg 168  Q
    ||||||||||||||||    
T  16739176 ggaataagtttcatgg 16739191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 64 - 168
Target Start/End: Complemental strand, 46820229 - 46820123
Alignment:
Q  64 cgtcctaatttataagcaaaaa--actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagt 161  Q
    |||||||||||||||| |||||  ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| |    
T  46820229 cgtcctaatttataagtaaaaaccactaattcacatttattaagaaaactaacacttagtgatttgaggtatgattttttgtgttcttctcggaataaat 46820130  T
Q  162 ttcatgg 168  Q
    |||||||    
T  46820129 ttcatgg 46820123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 52252238 - 52252125
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaa--actaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcct 151  Q
    |||||||||||||||||||||||||| |||||  | ||||||| ||   |||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  52252238 gtactccctccgtcctaatttataagtaaaaaatattaattcatac---ttaagaaaactaacacttagtgatttgaagtataattttttgtgttcttct 52252142  T
Q  152 tggaataagtttcatgg 168  Q
    |||||||||||||||||    
T  52252141 tggaataagtttcatgg 52252125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 1335297 - 1335199
Alignment:
Q  72 tttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    |||||||| |||||||  |||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||||||||||||||||||    
T  1335297 tttataagaaaaaaacattaattcacacttattaagaaaactaatacttagtgttttgagatattattttttgtgttctccttggaataagtttcatgg 1335199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 43576133 - 43576046
Alignment:
Q  81 aaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    |||| ||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  43576133 aaaacactaattcatacttattaagaaaattaacacttagtgatttgaggtatgattttttgtgttctccttcgaataagtttcatgg 43576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 55 - 168
Target Start/End: Complemental strand, 51255390 - 51255275
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||| |||||||||||||||||||||||||   ||||||| | ||||||||||||||||||| |||| || ||| ||||||||||||||||||||||     
T  51255390 tactccttccgtcctaatttataagcaaaaaatattaattcatatttattaagaaaactaacacgtagtaatatgaagtataattttttgtgttctccta 51255291  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  51255290 gaaataagtttcatgg 51255275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 13541437 - 13541347
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgt 143  Q
    |||||||||||| ||||||||||| ||||||||  |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  13541437 tactccctccgttctaatttataaccaaaaaacactaattcacacttattaagaaaattaacacttagtaatttgaggtataattttttgt 13541347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 36188922 - 36189037
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaact--aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||| ||| ||||||||||||||||||   |||||||||||||||||||| |||| ||  ||| |||||||||||| |||||||| ||||||||    
T  36188922 tactccctccatcccaatttataagcaaaaaacacaaattcacacttattaagaaatctaaaacacagtaatttgaggtatagttttttgtattctcctt 36189021  T
Q  153 ggaataagtttcatgg 168  Q
    | ||||||||||||||    
T  36189022 gaaataagtttcatgg 36189037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 23514646 - 23514554
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac---taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtg 144  Q
    ||||||||||||| ||||||||||||||||||    ||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||    
T  23514646 tactccctccgtcttaatttataagcaaaaaaacattaattcacatttattaagaaaactaacacttattgatttgaggtataattttgtgtg 23514554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 51309619 - 51309504
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaa---ctaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcc 150  Q
    ||||||| ||||||| |||||||||||||||||   | |||||||| ||||||||||||  || || ||||  ||||||||||||||||||||||||| |    
T  51309619 gtactccttccgtcccaatttataagcaaaaaaacacaaattcacatttattaagaaaataaaaacatagtagtttgaggtataattttttgtgttcttc 51309520  T
Q  151 ttggaataagtttcat 166  Q
    ||||||||||||||||    
T  51309519 ttggaataagtttcat 51309504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 55400759 - 55400707
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55400759 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 55400707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 45781549 - 45781486
Alignment:
Q  105 gaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcatgg 168  Q
    |||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||    
T  45781549 gaaaactaacacttagtgatttgatgtataattttttgtgttctctttagaataagtttcatgg 45781486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 1335131 - 1335079
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1335131 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacata 1335079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 13541298 - 13541246
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13541298 gcaatttgcatttaattttacattggaaaagatgatttgttcgaaaaaacata 13541246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 21654266 - 21654218
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  21654266 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 21654218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 31126233 - 31126181
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31126233 gcaatttgcatttaattttacattggaaaaaatgatttgtttgaaaaaacata 31126181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 37324183 - 37324231
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37324183 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 37324231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 49068072 - 49068020
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  49068072 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaacata 49068020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 288
Target Start/End: Complemental strand, 52252052 - 52252005
Alignment:
Q  241 ttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  52252052 ttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 52252005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 23513588 - 23513536
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  23513588 gcaatttgcatttaattttacattgaaaaagatgttttgtttgaaaaaacata 23513536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 26641211 - 26641263
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  26641211 gcaatttgcatttaattttaccttgaaaaagatgatttgtttgaaaaaacata 26641263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 45781418 - 45781366
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45781418 gcaacttgaatttaattttacattggaaaagatgatttgtttgaaaaaacata 45781366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 46296176 - 46296228
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  46296176 gcaacttgcatttaattttacatcggaaaagatgatttgtttgaaaaaacata 46296228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 46580557 - 46580505
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  46580557 gcaatttgcatttaattttacattgtaaaatatgatttgtttgaaaaaacata 46580505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 46820070 - 46820018
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  46820070 gcaacttgcatttaattttacattggaaaagatgatttgtttaaaaaaacata 46820018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 51255207 - 51255155
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  51255207 gcaacttgcatttaattttagattggaaaagatgatttgtttgaaaaaacata 51255155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 53020204 - 53020156
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  53020204 gcaatttgcatttaattttacattgaaaaagatgatttgtttgaaaaaa 53020156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 238 - 284
Target Start/End: Complemental strand, 51426638 - 51426592
Alignment:
Q  238 aatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  51426638 aatttgcatttaattttacattagaaaagatgatttgtttgaaaaaa 51426592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 26724906 - 26725014
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttgg 154  Q
    |||||||||||||| || || |||  ||||||  |||||| |||||||||||||||||| |  ||   |||||| ||||||||||||||||| || ||||    
T  26724906 tactccctccgtcccaaattgtaaaaaaaaaaaaaattcatacttattaagaaaactaaaatataagaatttgaagtataattttttgtgttttctttgg 26725005  T
Q  155 aataagttt 163  Q
    |||||||||    
T  26725006 aataagttt 26725014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 284
Target Start/End: Original strand, 52172109 - 52172157
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  52172109 gcaacttgcatttaattttacattgaaaaagatgatttgtttgaaaaaa 52172157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 284
Target Start/End: Original strand, 16739263 - 16739302
Alignment:
Q  245 atttaattttacattggaaaagatgatttgtttgaaaaaa 284  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16739263 atttaattttacattggaaaagatgatttgtttgaaaaaa 16739302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 283
Target Start/End: Complemental strand, 43575978 - 43575931
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaa 283  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||    
T  43575978 gcaacttgcatttaattttacattagaaaagatgatttgtttgaaaaa 43575931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 28793183 - 28793130
Alignment:
Q  236 gcaatttgcatttaatttt-acattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| |||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  28793183 gcaacttgcatttaatttttacattagaaaagatgatttgtttgaaaaaacata 28793130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 32322338 - 32322390
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||| ||| |||||||||||||||| ||||||| |||||||||||||||||||    
T  32322338 gcaacttgtatttaattttacattgaaaaagataatttgtttgaaaaaacata 32322390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 37042330 - 37042440
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||| || ||||||||||||||  ||   |||||||||||||||||||||| || ||   |||||  ||||| ||||||||||| || ||    
T  37042330 tactccctccgtcccaaattataagcaaaaaaacaaaaatcacacttattaagaaaactaaaacataaaaatttggagtatagttttttgtgttttcgtt 37042429  T
Q  153 ggaataagttt 163  Q
    |||| ||||||    
T  37042430 ggaaaaagttt 37042440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 162
Target Start/End: Complemental strand, 31292788 - 31292707
Alignment:
Q  81 aaaaaactaattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtt 162  Q
    |||||| || |||||||||||| | |||||||| || | || |||||| ||||||||| || ||||||||||||||| ||||    
T  31292788 aaaaaattatttcacacttattgaaaaaactaaaacatggtaatttgaagtataatttcttttgttctccttggaattagtt 31292707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Original strand, 36189105 - 36189158
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtt-tgaaaaaacata 288  Q
    ||||||||||||||||||||| |||||||||| ||||| || ||||||||||||    
T  36189105 gcaatttgcatttaattttactttggaaaagaagattttttgtgaaaaaacata 36189158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 288
Target Start/End: Complemental strand, 34022622 - 34022590
Alignment:
Q  256 cattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||||||||||||||||    
T  34022622 cattggaaaagatgatttgtttgaaaaaacata 34022590  T

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Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 54464808 - 54464902
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat---tcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgtt 146  Q
    |||| |||||||||||| ||||||||||||||  ||    ||||| |||||||||||||||| || ||   |||||| |||||||||||||||||    
T  54464808 tacttcctccgtcctaaattataagcaaaaaaaaaaaaaatcacatttattaagaaaactaaaacataagaatttgaagtataattttttgtgtt 54464902  T

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Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 2927501 - 2927441
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaactaat--tcacacttattaagaaaactaa 113  Q
    ||||||||||||||||| ||||||||||||||  ||   ||||| ||||||||||||||||    
T  2927501 tactccctccgtcctaaattataagcaaaaaaacaaaaatcacatttattaagaaaactaa 2927441  T

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Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 166
Target Start/End: Complemental strand, 30612346 - 30612269
Alignment:
Q  89 aattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctccttggaataagtttcat 166  Q
    |||||||||||||||||||||| || |  |||| |||| || ||||||||||| ||||||| ||  ||| ||||||||    
T  30612346 aattcacacttattaagaaaacaaaaatatagtaatttaagatataattttttatgttctctttaaaatgagtttcat 30612269  T

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Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 47444073 - 47444121
Alignment:
Q  240 tttgcatttaattttacattggaaaagatgatttgtttgaaaaaacatag 289  Q
    ||||||||||||||| | ||||||||||| |||| |||||||||||||||    
T  47444073 tttgcatttaattttcctttggaaaagataattt-tttgaaaaaacatag 47444121  T

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Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 2994518 - 2994565
Alignment:
Q  240 tttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||| | ||||||||||| |||| ||||||||||||||    
T  2994518 tttgcatttaattttcctttggaaaagataattt-tttgaaaaaacata 2994565  T

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Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 10114791 - 10114823
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaa 86  Q
    |||||||||||||||||| ||||||||||||||    
T  10114791 gtactccctccgtcctaaattataagcaaaaaa 10114823  T

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Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 22456108 - 22456155
Alignment:
Q  240 tttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||| | ||||||||||| |||| ||||||||||||||    
T  22456108 tttgcatttaattttcctttggaaaagataattt-tttgaaaaaacata 22456155  T

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Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 22479154 - 22479201
Alignment:
Q  240 tttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    ||||||||||||||| | ||||||||||| |||| ||||||||||||||    
T  22479154 tttgcatttaattttcctttggaaaagataattt-tttgaaaaaacata 22479201  T

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Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 54725534 - 54725594
Alignment:
Q  54 gtactccctccgtcctaatttataagcaaaaaactaat-tcacacttattaagaaaactaa 113  Q
    |||||||||||||||||  ||||||| ||||||  ||  ||||||||||||||||||||||    
T  54725534 gtactccctccgtcctatattataagaaaaaaaagaaaatcacacttattaagaaaactaa 54725594  T

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Target: scaffold0495 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 4833 - 4720
Alignment:
Q  55 tactccctccgtcctaatttataagcaaaaaac--taattcacacttattaagaaaactaacacttagtgatttgaggtataattttttgtgttctcctt 152  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4833 tactccctccgtcctaatttataagcaaaaaacactaattcacacttattaagaaaactaacacttagtgatttgaggtataatttttagtgttctcctt 4734  T
Q  153 ggaataagtttcat 166  Q
    | ||||||||||||    
T  4733 gaaataagtttcat 4720  T

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Target: scaffold0495; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 4650 - 4599
Alignment:
Q  236 gcaatttgcatttaattttacattggaaaagatgatttgtttgaaaaaacata 288  Q
    |||||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  4650 gcaatttgcatttaattttatattgg-aaagatgatttgtttggaaaaacata 4599  T

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Target: scaffold0300 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 525 - 587
Alignment:
Q  53 ggtactccctccgtcctaatttataagc-aaaaaactaat-tcacacttattaagaaaactaa 113  Q
    ||||||||||||||||||| |||||||| ||||||| ||| ||||||||||||||||||||||    
T  525 ggtactccctccgtcctaaattataagcaaaaaaacaaatatcacacttattaagaaaactaa 587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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