View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20540_high_7 (Length: 206)
Name: NF20540_high_7
Description: NF20540
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20540_high_7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 13457613 - 13457818
Alignment:
| Q |
1 |
aaacaccatcatgatgctcacaacgactattttgcttattgctatcggggtccttaccatcagcattaggaagaacagcttcatagaacttcctacattg |
100 |
Q |
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| T |
13457613 |
aaacaccatcatgatgctcacaacgactattttgcttattgctatcggggtccttaccatcagcattaggaagaacagcttcatagaacttcctacattg |
13457712 |
T |
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| Q |
101 |
tttgcagtcgactccttttaaattttcgcgatcagccttctttctcactggctcaatgtacttgaaactctttttactggccactgtaatggaagattgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13457713 |
tttgcagtcgactccttttaaattttcgcgatcagccttctttctcactggctcaatgtacttgaaactctttttactggccactgtaatggaagattgc |
13457812 |
T |
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| Q |
201 |
ttcttc |
206 |
Q |
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|||||| |
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| T |
13457813 |
ttcttc |
13457818 |
T |
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