View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20543_high_3 (Length: 656)
Name: NF20543_high_3
Description: NF20543
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20543_high_3 |
 | |
|
| [»] scaffold1408 (2 HSPs) |
| | |
|
| [»] scaffold0428 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 580; Significance: 0; HSPs: 27)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 580; E-Value: 0
Query Start/End: Original strand, 20 - 627
Target Start/End: Complemental strand, 33644552 - 33643950
Alignment:
| Q |
20 |
gacatcatcattctcatctcgttcccgcccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatataca |
119 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33644552 |
gacatcgtcattctcatctcgttcccgcccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatataca |
33644453 |
T |
|
| Q |
120 |
agtttggaaagcttcctcaggctaggtagtgtcacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacat |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33644452 |
agtttggaaagcttcctcaggctaggtagtgtcacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacat |
33644353 |
T |
|
| Q |
220 |
ggcttagacggcaatagctaatgtcaatgctacgcaaacaatataagctatgcaaggatggcaacgaatacttgttaaacactttggaacaaccacccaa |
319 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33644352 |
ggcttagacggcaatagctaatgtcaatgctacgcaaacaatataagctatgcaaggatggcaacgaatacttgttaaacactttggaacaaccacccaa |
33644253 |
T |
|
| Q |
320 |
atttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatcttttacattcaagtaaacaagctttcttaaaagc |
419 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33644252 |
atttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatcttttacattcaagtaaacaagctttcttaaaa-- |
33644155 |
T |
|
| Q |
420 |
tgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaactctccaaaatctattatcttttctag |
519 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33644154 |
---gtccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaactctccaaaatctattatcttttctag |
33644058 |
T |
|
| Q |
520 |
ctttctagaatcacttaaatccaatcttctcagattgggaagatactgtgacatgaaaagccaagaaaaataaatacattactttgattgtatgacaatt |
619 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33644057 |
ctttctagaatcacttaaatccaatcttctcagattgggaagatactgtgacatgaaaagccaagaaaaataaatacattactttgattgtatgacaatt |
33643958 |
T |
|
| Q |
620 |
gtaagata |
627 |
Q |
| |
|
|||||||| |
|
|
| T |
33643957 |
gtaagata |
33643950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 22 - 289
Target Start/End: Original strand, 33399052 - 33399319
Alignment:
| Q |
22 |
catcatcattctcatctcgttcccgcccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaag |
121 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33399052 |
catcgtcattctcatctcgttcccgcccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaag |
33399151 |
T |
|
| Q |
122 |
tttggaaagcttcctcaggctaggtagtgtcacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatgg |
221 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| |||||||| ||||||||| ||| |
|
|
| T |
33399152 |
ttcggaaagcttcctcaggctaggtagtgtcacaaaattgtttccctttaaatttaatctttctagccaatgtaaatcttcaattgcatcaggaacttgg |
33399251 |
T |
|
| Q |
222 |
cttagacggcaatagctaatgtcaatgctacgcaaacaatataagctatgcaaggatggcaacgaata |
289 |
Q |
| |
|
|||||| |||| |||||||||||| | ||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
33399252 |
cttagattgcaaaagctaatgtcaactccacgcaaacaatctaagctatgcaaggatggcaacaaata |
33399319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 42 - 256
Target Start/End: Original strand, 33271843 - 33272057
Alignment:
| Q |
42 |
tcccgcccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggc |
141 |
Q |
| |
|
||||||||| |||| | || ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33271843 |
tcccgcccactagtaggtggagaaggaagtcgaggcaaagattccaacaacttgcaatgttccaaatttaaatatacaagtttggaaagcttcctcaggc |
33271942 |
T |
|
| Q |
142 |
taggtagtgtcacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatggcttagacggcaatagctaat |
241 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||| |||| |||| ||||| ||||||| |
|
|
| T |
33271943 |
taggtagtgtcacaaaattgtttccccctaaatctaatctttctagccaatgtaaacattcaattgcatcaggaacttggcgtagatggcaaaagctaat |
33272042 |
T |
|
| Q |
242 |
gtcaatgctacgcaa |
256 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
33272043 |
gtcaatgctacgcaa |
33272057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 42 - 246
Target Start/End: Complemental strand, 31562811 - 31562607
Alignment:
| Q |
42 |
tcccgcccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggc |
141 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||| || || |
|
|
| T |
31562811 |
tcccgcccaatagtggtaggagaaggaagttgaggcaaagattccaacaactcgcaatgctccaaatttaaatatacaagtttggaaagcttccacaagc |
31562712 |
T |
|
| Q |
142 |
taggtagtgtcacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatggcttagacggcaatagctaat |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| || ||||||||||||||| ||||||| |
|
|
| T |
31562711 |
taggtagtgtcacaaaatagtttccccctaaatttaatctttctagcgagcttaaacattcaattgcatcaggcacttggcttagacggcaaaagctaat |
31562612 |
T |
|
| Q |
242 |
gtcaa |
246 |
Q |
| |
|
||||| |
|
|
| T |
31562611 |
gtcaa |
31562607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 50 - 289
Target Start/End: Original strand, 33304510 - 33304749
Alignment:
| Q |
50 |
aatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctaggtagt |
149 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||||||||| |||| || | ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33304510 |
aatattggtaggagaaggaagttgaggcaaagattccaacaacatgcaatgctgcaaatttaaatatacaagtttggaaagcttcctcaggctaggtaga |
33304609 |
T |
|
| Q |
150 |
gtcacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatggcttagacggcaatagctaatgtcaatgc |
249 |
Q |
| |
|
|||||||||| ||||||| |||| ||||||||||||||||| | |||||||||||||| ||||||||| ||||||||| ||||| |||||||||||| | |
|
|
| T |
33304610 |
gtcacaaaattgtttccctctaagtttaatctttctagcgagtataaacattcaattgcatcaggaacttggcttagatggcaaaagctaatgtcaacgt |
33304709 |
T |
|
| Q |
250 |
tacgcaaacaatataagctatgcaaggatggcaacgaata |
289 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
33304710 |
ctcgcaaacaaactaagctatgcaaggatggcaacaaata |
33304749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 30 - 233
Target Start/End: Original strand, 33358873 - 33359076
Alignment:
| Q |
30 |
ttctcatctcgttcccgcccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaa |
129 |
Q |
| |
|
||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |
|
|
| T |
33358873 |
ttctcatcttgttcccacccaatagtggtaggaaaaggaagttgaggcaaagattccaacaacttgcaatgttccaaatttaaatatacaagtttagaaa |
33358972 |
T |
|
| Q |
130 |
gcttcctcaggctaggtagtgtcacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatggcttagacg |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||| ||| ||||| || |||||| | |
|
|
| T |
33358973 |
gcttcctcaggctaggtagtgtcacaaaatcgtttccccctaaatttaatatttctagccaatgtaaacattcaattgcatcgggaacttgacttagatg |
33359072 |
T |
|
| Q |
230 |
gcaa |
233 |
Q |
| |
|
|||| |
|
|
| T |
33359073 |
gcaa |
33359076 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 42 - 289
Target Start/End: Original strand, 33388178 - 33388425
Alignment:
| Q |
42 |
tcccgcccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggc |
141 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||| ||||||| ||| |||||||| || ||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
33388178 |
tcccgcccaatagtggtaagagaaggaagttgaggaaaagatttcaagaacttgcaatgctccaaatttaaatatacaagtttggaaagcttcctcaagc |
33388277 |
T |
|
| Q |
142 |
taggtagtgtcacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatggcttagacggcaatagctaat |
241 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| ||||||| || |||||||||||||||||||| ||||| || ||||| | ||| ||||||| |
|
|
| T |
33388278 |
taggtagtgtcacaaaatcgtttccccctaaatttaatttttctagtgagtgtaaacattcaattgaatcgggaacttgatttagatgacaaaagctaat |
33388377 |
T |
|
| Q |
242 |
gtcaatgctacgcaaacaatataagctatgcaaggatggcaacgaata |
289 |
Q |
| |
|
||||| |||||||||||| ||||||||||| |||||||||| |||| |
|
|
| T |
33388378 |
gtcaactttacgcaaacaatttaagctatgcacggatggcaacaaata |
33388425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 52 - 283
Target Start/End: Original strand, 33410033 - 33410264
Alignment:
| Q |
52 |
tagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctaggtagtgt |
151 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||| || | ||||| ||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
33410033 |
tagtggtaggaaaaggaagttgaggcaaagattccaacaacttgcaatgctgcaaatctaaatattcaagtttggaaagcttcctcaagctaggtagtgt |
33410132 |
T |
|
| Q |
152 |
cacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatggcttagacggcaatagctaatgtcaatgcta |
251 |
Q |
| |
|
|||||||||||||||| |||||| ||||||||||||||||||||||| |||||||| ||||||||| ||| ||||| ||||| ||||||| |||| | |
|
|
| T |
33410133 |
cacaaaatagtttcccgctaaatataatctttctagcgaatgtaaaccttcaattgcatcaggaacttggtttagatggcaaaagctaatatcaacttga |
33410232 |
T |
|
| Q |
252 |
cgcaaacaatataagctatgcaaggatggcaa |
283 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |
|
|
| T |
33410233 |
cgcaaacaatataagctatgcaatgatggcaa |
33410264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 55 - 284
Target Start/End: Original strand, 33057600 - 33057829
Alignment:
| Q |
55 |
tggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctaggtagtgtcac |
154 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
33057600 |
tggtaggaaaaggaagttgaggcaaagattccaacaatttgcaatgctccaaatttaaatatacaagtttggatagcttcctcaggctaggtaatgtcac |
33057699 |
T |
|
| Q |
155 |
aaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatggcttagacggcaatagctaatgtcaatgctacgc |
254 |
Q |
| |
|
||||| ||||||| |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| |||| |||| ||||||| ||||| |
|
|
| T |
33057700 |
aaaatcgtttcccgctaaatttaatctttctagccaatgtaaacattcaattgcatcaggcacatggcttagatagcaaaagcttatgtcaaccttacgc |
33057799 |
T |
|
| Q |
255 |
aaacaatataagctatgcaaggatggcaac |
284 |
Q |
| |
|
|||||| |||| ||||||||||| |||||| |
|
|
| T |
33057800 |
aaacaacataaactatgcaaggaaggcaac |
33057829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 42 - 284
Target Start/End: Original strand, 33262644 - 33262886
Alignment:
| Q |
42 |
tcccgcccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggc |
141 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33262644 |
tcccgcccaatagaggtaggagaaggaagttgaggcaaagattccaacaacctgcaatgctccaaatttaaatatacaagtttggaaagcttcctcaggc |
33262743 |
T |
|
| Q |
142 |
taggtagtgtcacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatggcttagacggcaatagctaat |
241 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||| || |||| |||| |||| |||| || |
|
|
| T |
33262744 |
taggtagtgtcacaaaatcatttccccctaaatttaatctttctagccaatgtaagcattcaattgtgccaggcacttggcgtagatagcaaaagcttat |
33262843 |
T |
|
| Q |
242 |
gtcaatgctacgcaaacaatataagctatgcaaggatggcaac |
284 |
Q |
| |
|
||||| |||||||||||| ||| ||| ||||||| |||||| |
|
|
| T |
33262844 |
gtcaacattacgcaaacaatgtaaactacgcaaggaaggcaac |
33262886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 47 - 284
Target Start/End: Original strand, 33285641 - 33285878
Alignment:
| Q |
47 |
cccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctaggt |
146 |
Q |
| |
|
||||||| ||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
33285641 |
cccaatattggtaggaaaaggaagttgaggcaaagattccaacaacttgcaatgctccaaatttaaatatacaagtttggacagctttctcaggctaggt |
33285740 |
T |
|
| Q |
147 |
agtgtcacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatggcttagacggcaatagctaatgtcaa |
246 |
Q |
| |
|
||||||||||||| |||||||||||| |||||| |||||||| ||| |||||||||||||| || | || ||||||||||||||| ||||||||| || |
|
|
| T |
33285741 |
agtgtcacaaaattgtttccccctaagtttaatatttctagccaatataaacattcaattgcatatgacacttggcttagacggcaaaagctaatgttaa |
33285840 |
T |
|
| Q |
247 |
tgctacgcaaacaatataagctatgcaaggatggcaac |
284 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |
|
|
| T |
33285841 |
cttcacgcaaacaatataagctatgcaaggatgacaac |
33285878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 291 - 583
Target Start/End: Original strand, 33057956 - 33058243
Alignment:
| Q |
291 |
ttgttaaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatctttta |
390 |
Q |
| |
|
|||||||| ||||||||||| |||| || |||||| | ||||||||||||||||| ||||||||||||||||||||| || ||| ||| |||||||||| |
|
|
| T |
33057956 |
ttgttaaatactttggaacagccacacatatttaggtattgaagagagctaagaccgaatatgttgttgggtatgctaactagacttttgcaatctttta |
33058055 |
T |
|
| Q |
391 |
cattcaagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcggg |
490 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||||| ||||||||| |||||||||| ||||||||||||| ||| | ||||||||||||| |
|
|
| T |
33058056 |
ggttcaagtaaacaagctttcttagaagt-----ccaatagatggatccaactcaacaaggtttatacatccttccaaatctaaacgctcaagattcggg |
33058150 |
T |
|
| Q |
491 |
aactctccaaaatctattatcttttctagctttctagaatcacttaaatccaatcttctcagattgggaagatactgtgacatgaaaagccaa |
583 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| || | || || ||||||| |||||| ||||||||||||||||||| |||||| |||| |
|
|
| T |
33058151 |
aactctccaaaatctattatcttttctagatttctggagtgacgtagatccaatgttctcaaattgggaagatactgtgacgtgaaaaaccaa |
33058243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 291 - 608
Target Start/End: Original strand, 33410356 - 33410665
Alignment:
| Q |
291 |
ttgttaaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatctttta |
390 |
Q |
| |
|
|||||||||||||||||||| |||| || || |||||||| |||||||||||||| ||||||| |||||||||||||||| | |||| |||| | | |
|
|
| T |
33410356 |
ttgttaaacactttggaacagccacacatatatagatcttcaagagagctaagacagaatatgctgttgggtatgcttactaaatttatgcaatagtcca |
33410455 |
T |
|
| Q |
391 |
cattcaagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcggg |
490 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||| ||| |||||||||||||||| ||| | |||| ||||||||||||| |||||||||||||| |
|
|
| T |
33410456 |
aattcaagtaaacaagctttcttagaagt-----ccaatcgatgaatccaactccacaagtttttcacatctttccaaatttaacgactcaagattcggg |
33410550 |
T |
|
| Q |
491 |
aactctccaaaatctattatcttttctagctttctagaatcacttaaatccaatcttctcagattgggaagatactgtgacatgaaaagccaagaaaaat |
590 |
Q |
| |
|
|||||||||||||||||||||||||||| || | || ||||||| ||||||| | ||| |||||||| ||||||||||||||||||| || |||||| |
|
|
| T |
33410551 |
aactctccaaaatctattatcttttcta---ttttggagtcacttagatccaatgctttcaaattgggaaaatactgtgacatgaaaagcaaacaaaaat |
33410647 |
T |
|
| Q |
591 |
aaatacattactttgatt |
608 |
Q |
| |
|
| | |||||||||||||| |
|
|
| T |
33410648 |
agagacattactttgatt |
33410665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 291 - 567
Target Start/End: Original strand, 33272197 - 33272468
Alignment:
| Q |
291 |
ttgttaaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatctttta |
390 |
Q |
| |
|
|||||||||||||| |||||||||| || ||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||| |||| ||||| |
|
|
| T |
33272197 |
ttgttaaacactttagaacaaccacgcatatttagatcttcaagagagcaaagatcaaatatgttgttgggtatgcttactagatttttgcaatttttta |
33272296 |
T |
|
| Q |
391 |
cattcaagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcggg |
490 |
Q |
| |
|
||||||||||||||||||||||| || | ||||||||| ||||||||||||||| ||| || |||||||||||||||||||||||||||||| |
|
|
| T |
33272297 |
aattcaagtaaacaagctttcttagaa-----gtccaatagatggatccaactccacaagatttttacacccttccaaatttaaccactcaagattcggg |
33272391 |
T |
|
| Q |
491 |
aactctccaaaatctattatcttttctagctttctagaatcacttaaatccaatcttctcagattgggaagatactg |
567 |
Q |
| |
|
|||||||||||||||| |||||| ||| ||||| || | ||||| | |||||||||||| ||||||||||||||| |
|
|
| T |
33272392 |
aactctccaaaatctacaatctttaatagttttctggagtaacttagacccaatcttctcaaattgggaagatactg |
33272468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 295 - 591
Target Start/End: Original strand, 33388467 - 33388756
Alignment:
| Q |
295 |
taaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatcttttacatt |
394 |
Q |
| |
|
||||| ||||||||||||||| | ||||||||||| |||||||||||||| | |||||||||||||||||||||| |||||| | ||| ||| | ||| |
|
|
| T |
33388467 |
taaacgctttggaacaaccacatatatttagatcttcaagagagctaagaccggatatgttgttgggtatgcttactagatttacgcaaccttccaaatt |
33388566 |
T |
|
| Q |
395 |
caagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaact |
494 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||||| ||| ||||| |||||||| | ||| |||||||||||||||||||||||||||||||| |
|
|
| T |
33388567 |
caagtaaacaagctttcttagaagt-----ccaatagatggatctaactcaacaaggttcgcacataattccaaatttaaccactcaagattcgggaact |
33388661 |
T |
|
| Q |
495 |
ctccaaaatctattatcttttctagctttctagaatcacttaaatccaatcttctcagattgggaagatactgtgacatgaaaagccaagaaaaata |
591 |
Q |
| |
|
|||||||||||| |||||||||||| ||||| || | |||| |||||||||||||| ||||||||||||| ||||||||||| ||| ||||||| |
|
|
| T |
33388662 |
ctccaaaatctactatcttttctagatttctggagtgtcttagatccaatcttctcaaattgggaagatac--tgacatgaaaaaacaacaaaaata |
33388756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 64 - 277
Target Start/End: Original strand, 9166792 - 9167005
Alignment:
| Q |
64 |
aaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctaggtagtgtcacaaaatagtt |
163 |
Q |
| |
|
||||||||||||||||| | ||||||||| |||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| | | |
|
|
| T |
9166792 |
aaggaagttgaggcaaaaactccaacaacctgcaatgctccaaatttaaatatacaagtttggaaagcttcctcaagctaggtagtgtcgcaaaatcgat |
9166891 |
T |
|
| Q |
164 |
tccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatggcttagacggcaatagctaatgtcaatgctacgcaaacaatat |
263 |
Q |
| |
|
||||||||| ||||||||||||||| | ||||||||||||||| |||||| | ||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
9166892 |
tccccctaagtttaatctttctagccaccgtaaacattcaattgtatcaggcaattggcttagatggcaatagctaatgtcaacttcacgcaaacaatat |
9166991 |
T |
|
| Q |
264 |
aagctatgcaagga |
277 |
Q |
| |
|
|| ||| ||||||| |
|
|
| T |
9166992 |
aaactacgcaagga |
9167005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 296 - 520
Target Start/End: Original strand, 9167171 - 9167390
Alignment:
| Q |
296 |
aaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatcttttacattc |
395 |
Q |
| |
|
||||| ||||||||| |||| || ||||||||||| |||||||||||||| |||||||||||||||||| |||| |||||| ||||||||||||||||| |
|
|
| T |
9167171 |
aaacaatttggaacagccacacatatttagatctttaagagagctaagaccgaatatgttgttgggtattcttattagatttccacaatcttttacattc |
9167270 |
T |
|
| Q |
396 |
aagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaactc |
495 |
Q |
| |
|
||||||||||||||||||| || | |||| |||| ||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| ||| | |
|
|
| T |
9167271 |
aagtaaacaagctttcttagaa-----gtccaagagatggatccaactccacaagttttacacatccttccaaatctaaccactcaagattcggaaaccc |
9167365 |
T |
|
| Q |
496 |
tccaaaatctattatcttttctagc |
520 |
Q |
| |
|
||||||||||| ||||||| ||||| |
|
|
| T |
9167366 |
tccaaaatctagtatctttactagc |
9167390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 296 - 578
Target Start/End: Original strand, 33359118 - 33359393
Alignment:
| Q |
296 |
aaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatcttttacattc |
395 |
Q |
| |
|
|||||||||||||||||| | || |||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||| |
|
|
| T |
33359118 |
aaacactttggaacaaccgcacatattttgatcttcaagagagctaagaccaaatatgttgttgggtatgcttactagatttttgtaatcttttaagttc |
33359217 |
T |
|
| Q |
396 |
aagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaactc |
495 |
Q |
| |
|
||||||||||||||| ||| ||| |||| |||| ||||||||||||||| ||||| ||||||| |||||||| | ||||||||||||||||| |
|
|
| T |
33359218 |
aagtaaacaagcttttttagaagt-----ccaagagatggatccaactccacaagttttacacatcctttcaaatttagcttttcaagattcgggaactc |
33359312 |
T |
|
| Q |
496 |
tccaaaatctattatcttttctagctttctagaatcacttaaatccaatcttctcagattgggaagatactgtgacatgaaaa |
578 |
Q |
| |
|
|||||||| ||||||||||||||| | | || | ||||| ||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
33359313 |
--caaaatctgttatcttttctagctctttggagttacttagatccaatgttctcaaattgggaagatactgtgacatgaaaa |
33359393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 291 - 621
Target Start/End: Original strand, 33263028 - 33263353
Alignment:
| Q |
291 |
ttgttaaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatctttta |
390 |
Q |
| |
|
|||||||||||||||||||| | || | ||||||||||| |||||||| |||| ||||||| |||| ||||||||||| || || | |||| || || |
|
|
| T |
33263028 |
ttgttaaacactttggaacagcaactgatatttagatcttcaagagagcccagaccgaatatggtgttcggtatgcttacaaggttatagcaattttcta |
33263127 |
T |
|
| Q |
391 |
cattcaagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcggg |
490 |
Q |
| |
|
||||||||||||||| ||||||| ||| ||||||||| ||||||||| ||||| ||| ||||||||||||||||||||||||||||| ||| |
|
|
| T |
33263128 |
aattcaagtaaacaagatttcttagaagt-----ccaatagatggatccaactcaacaagatttgtacatccttccaaatttaaccactcaagatttggg |
33263222 |
T |
|
| Q |
491 |
aactctccaaaatctattatcttttctagctttctagaatcacttaaatccaatcttctcagattgggaagatactgtgacatgaaaagccaagaaaaat |
590 |
Q |
| |
|
||||||||||||||||||||||||||||||| | || | ||||| ||||||| |||||| |||||| ||||||||||||||||| | ||| |||||| |
|
|
| T |
33263223 |
aactctccaaaatctattatcttttctagctcgatggagtgacttagatccaatgttctcaaattgggcagatactgtgacatgaataaacaataaaaat |
33263322 |
T |
|
| Q |
591 |
aaatacattactttgattgtatgacaattgt |
621 |
Q |
| |
|
| | ||||||||||||| || || |||||| |
|
|
| T |
33263323 |
agagccattactttgattataagagaattgt |
33263353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 296 - 608
Target Start/End: Complemental strand, 31562497 - 31562190
Alignment:
| Q |
296 |
aaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatcttttacattc |
395 |
Q |
| |
|
||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| | | || | | || |||| |
|
|
| T |
31562497 |
aaacactttggaacagccacgcatatttagatcttcaagagagctaagactgaatatgttgttgggtatgctttccagactatagcagccgtctaaattc |
31562398 |
T |
|
| Q |
396 |
aagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaactc |
495 |
Q |
| |
|
|||||| ||||||| || ||| ||||||||| |||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||| | |
|
|
| T |
31562397 |
aagtaagaaagcttttctagaagt-----ccaatagatggatccaactccacaaggtttatacattcttccaaacttagccactcaagattcgggaacgc |
31562303 |
T |
|
| Q |
496 |
tccaaaatctattatcttttctagctttctagaatcacttaaatccaatcttctcagattgggaagatactgtgacatgaaaagccaagaaaaataaata |
595 |
Q |
| |
|
||||||||||||||||||| | || ||| | || | ||||| ||||||| |||| | ||||||||||||||||||||| |||| | || ||||||| | |
|
|
| T |
31562302 |
tccaaaatctattatctttacaagatttatggagtgacttagatccaattttcttaaattgggaagatactgtgacataaaaaacaaacaaaaatagagc |
31562203 |
T |
|
| Q |
596 |
cattactttgatt |
608 |
Q |
| |
|
||||||||||||| |
|
|
| T |
31562202 |
cattactttgatt |
31562190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 42 - 188
Target Start/End: Complemental strand, 28870159 - 28870013
Alignment:
| Q |
42 |
tcccgcccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggc |
141 |
Q |
| |
|
|||||||| |||| |||||| ||||||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
28870159 |
tcccgcccgataggggtaggagaaggaagttgaggcaaagattcaaacaacttgcaatgctccaaatttaaatattcaagtttggaaagcttcctcaggc |
28870060 |
T |
|
| Q |
142 |
taggtagtgtcacaaaatagtttccccctaaatttaatctttctagc |
188 |
Q |
| |
|
|||| |||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
28870059 |
taggcagtgtcacaaaatagtttccccgtaagtttaatctttctagc |
28870013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 294 - 519
Target Start/End: Original strand, 33304880 - 33305100
Alignment:
| Q |
294 |
ttaaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatcttttacat |
393 |
Q |
| |
|
||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| || || | || || |
|
|
| T |
33304880 |
ttaaacactttggaacatccatacatatttagatcttcaagagagctaagactgaatatgttattgggtatgcttactagatttttgcattcatataaat |
33304979 |
T |
|
| Q |
394 |
tcaagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaac |
493 |
Q |
| |
|
||||||||||||||||||||| || | ||||||||| |||||||||||||||||||| |||||||||||||||| | |||||||||||||||| |
|
|
| T |
33304980 |
tcaagtaaacaagctttcttagaa-----gtccaatagatggatccaactccacaaggtttatacatccttccaaatttagcttctcaagattcgggaac |
33305074 |
T |
|
| Q |
494 |
tctccaaaatctattatcttttctag |
519 |
Q |
| |
|
|| |||||||||| ||||||| |||| |
|
|
| T |
33305075 |
tccccaaaatctagtatctttactag |
33305100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 323 - 578
Target Start/End: Original strand, 33285971 - 33286221
Alignment:
| Q |
323 |
tagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatcttttacattcaagtaaacaagctttcttaaaagctgc |
422 |
Q |
| |
|
||||| || ||||||||| |||| |||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||| ||||||| ||| |
|
|
| T |
33285971 |
tagatatttaagagagcttagaccgaatatgttgttgggtatgcttacaagatttttgcaatcttttaaattcaagtaaacaaggtttcttagaagt--- |
33286067 |
T |
|
| Q |
423 |
gaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaactctccaaaatctattatcttttctagctt |
522 |
Q |
| |
|
||||||||| ||||||||||| |||| | | ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||| || |
|
|
| T |
33286068 |
--ccaatagatggatccaactccaaaaggctgatacatccttccaaatttaaccactcaagattcgggaactctccgaaatctactatctttactagttt |
33286165 |
T |
|
| Q |
523 |
tctagaatcacttaaatccaatcttctcagattgggaagatactgtgacatgaaaa |
578 |
Q |
| |
|
| | || | | || |||||||| |||| |||||||||||||||| | ||||||| |
|
|
| T |
33286166 |
tttggagtatcgtagatccaatcccctcaaattgggaagatactgtaatatgaaaa |
33286221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 291 - 471
Target Start/End: Original strand, 33399348 - 33399523
Alignment:
| Q |
291 |
ttgttaaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatctttta |
390 |
Q |
| |
|
|||||||||||||||||||| ||| || |||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33399348 |
ttgttaaacactttggaacagccattcatatttagatattcaagagagctaagatcgaatatgttgttgggtatgcttaccagattttcacaatctttta |
33399447 |
T |
|
| Q |
391 |
cattcaagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatt |
471 |
Q |
| |
|
|||||||| ||||||||||||||| || | ||||||||| ||||||||||||||| ||| |||||| ||||||| |
|
|
| T |
33399448 |
cattcaagcaaacaagctttcttagaa-----gtccaatagatggatccaactccacaagttttttacatcctcccaaatt |
33399523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 291 - 565
Target Start/End: Complemental strand, 28869878 - 28869610
Alignment:
| Q |
291 |
ttgttaaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatctttta |
390 |
Q |
| |
|
|||||||||||||||||||| ||| || ||||||||||| ||||||| |||||| |||||||||||||| || ||||| | ||| | ||| | |||| |
|
|
| T |
28869878 |
ttgttaaacactttggaacagccagacatatttagatcttcaagagagttaagaccgaatatgttgttgg-tacacttactatattatagcaaccgttta |
28869780 |
T |
|
| Q |
391 |
cattcaagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcggg |
490 |
Q |
| |
|
||||||||| ||||||||||||| ||| ||||||||| ||||||||| |||||||||| || ||| ||| |||| | ||||||||| ||| |
|
|
| T |
28869779 |
aattcaagtatacaagctttcttagaagt-----ccaatagatggatccaactcaacaaggtttatacactctttcaactttagcttctcaagatttggg |
28869685 |
T |
|
| Q |
491 |
aactctccaaaatctattatcttttctagctttctagaatcacttaaatccaatcttctcagattgggaagatac |
565 |
Q |
| |
|
||||||||||||||||||||||||||||| || || || | ||||| || |||| |||||| ||||||||||||| |
|
|
| T |
28869684 |
aactctccaaaatctattatcttttctagattgctggagtgacttagatgcaatgttctcaaattgggaagatac |
28869610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 392 - 608
Target Start/End: Original strand, 33399521 - 33399732
Alignment:
| Q |
392 |
attcaagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcggga |
491 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||| ||||||||| |||||||| ||| |||||||| ||||||||||||||| |||| |
|
|
| T |
33399521 |
attcaagtaaacaagctttcttagaagt-----ccaatagatggatccaactcaacaaggttcttacataattccaaatctaaccactcaagatttggga |
33399615 |
T |
|
| Q |
492 |
actctccaaaatctattatcttttctagctttctagaatcacttaaatccaatcttctcagattgggaagatactgtgacatgaaaagccaagaaaaata |
591 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| | ||| | ||| ||||||| ||| || |||| |||||||||||||||||| | ||| ||||| | |
|
|
| T |
33399616 |
actctccaaaatctattatcttttctagatttattgaacccattagatccaattttcgcaaattgcgaagatactgtgacatgattaaacaataaaaaca |
33399715 |
T |
|
| Q |
592 |
aatacattactttgatt |
608 |
Q |
| |
|
| |||||||||||||| |
|
|
| T |
33399716 |
gagacattactttgatt |
33399732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 28870014 - 28869951
Alignment:
| Q |
221 |
gcttagacggcaatagctaatgtcaatgctacgcaaacaatataagctatgcaaggatggcaac |
284 |
Q |
| |
|
||||||| ||||| |||||| ||||| | ||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
28870014 |
gcttagatggcaaaagctaacgtcaacgttacacaaacaatataagctattcaaggatggcaac |
28869951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1408 (Bit Score: 152; Significance: 4e-80; HSPs: 2)
Name: scaffold1408
Description:
Target: scaffold1408; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 46 - 265
Target Start/End: Original strand, 669 - 888
Alignment:
| Q |
46 |
gcccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctagg |
145 |
Q |
| |
|
||||||||||| | || |||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
669 |
gcccaatagtgcttggaaaaggaagttgaggcaacgattccaacaacttgcaatgctccaaatttaaatatacaagtctggaaagcttcctcatgctagg |
768 |
T |
|
| Q |
146 |
tagtgtcacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatggcttagacggcaatagctaatgtca |
245 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
769 |
tagtgtcacaaaattatttccccctaaatttaatctttctagccgatgtaaacattcaattgcatcaggaacatggcttagatggcaaaagctaatgtca |
868 |
T |
|
| Q |
246 |
atgctacgcaaacaatataa |
265 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
869 |
atgttacgcaaacaatataa |
888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1408; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 302 - 591
Target Start/End: Original strand, 1057 - 1341
Alignment:
| Q |
302 |
tttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatcttttacattcaagtaa |
401 |
Q |
| |
|
||||||||| ||| || |||||||| || |||||||||||||| |||||||||||||||||||||||| ||||| | ||| | || |||||||||| |
|
|
| T |
1057 |
tttggaacatccagacatatttagatatttaagagagctaagaccgaatatgttgttgggtatgcttactagattatagcaacgctctaaattcaagtaa |
1156 |
T |
|
| Q |
402 |
acaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaactctccaaa |
501 |
Q |
| |
|
||||||||||||| ||| ||||||||| ||||||||||||||| |||| |||| |||||||||||||||||||||||| || |||| |||||| |
|
|
| T |
1157 |
acaagctttcttagaagt-----ccaatagatggatccaactccacaagttttatacatctttccaaatttaaccactcaagattaggaaactgtccaaa |
1251 |
T |
|
| Q |
502 |
atctattatcttttctagctttctagaatcacttaaatccaatcttctcagattgggaagatactgtgacatgaaaagccaagaaaaata |
591 |
Q |
| |
|
|||| ||||||||||||||| | || ||||||| |||||||||||||| ||||||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
1252 |
atcttctatcttttctagcttcttggagtcacttagatccaatcttctcaaattgggaagatgctgtgacatgaaaaaccaacaaaaata |
1341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 152; Significance: 4e-80; HSPs: 2)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 46 - 265
Target Start/End: Original strand, 6415 - 6634
Alignment:
| Q |
46 |
gcccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctagg |
145 |
Q |
| |
|
||||||||||| | || |||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| |||||| |
|
|
| T |
6415 |
gcccaatagtgcttggaaaaggaagttgaggcaacgattccaacaacttgcaatgctccaaatttaaatatacaagtctggaaagcttcctcatgctagg |
6514 |
T |
|
| Q |
146 |
tagtgtcacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatggcttagacggcaatagctaatgtca |
245 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
6515 |
tagtgtcacaaaattatttccccctaaatttaatctttctagccgatgtaaacattcaattgcatcaggaacatggcttagatggcaaaagctaatgtca |
6614 |
T |
|
| Q |
246 |
atgctacgcaaacaatataa |
265 |
Q |
| |
|
||| |||||||||||||||| |
|
|
| T |
6615 |
atgttacgcaaacaatataa |
6634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 302 - 591
Target Start/End: Original strand, 6803 - 7087
Alignment:
| Q |
302 |
tttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatcttttacattcaagtaa |
401 |
Q |
| |
|
||||||||| ||| || |||||||| || |||||||||||||| |||||||||||||||||||||||| ||||| | ||| | || |||||||||| |
|
|
| T |
6803 |
tttggaacatccagacatatttagatatttaagagagctaagaccgaatatgttgttgggtatgcttactagattatagcaacgctctaaattcaagtaa |
6902 |
T |
|
| Q |
402 |
acaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaactctccaaa |
501 |
Q |
| |
|
||||||||||||| ||| ||||||||| ||||||||||||||| |||| |||| |||||||||||||||||||||||| || |||| |||||| |
|
|
| T |
6903 |
acaagctttcttagaagt-----ccaatagatggatccaactccacaagttttatacatctttccaaatttaaccactcaagattaggaaactgtccaaa |
6997 |
T |
|
| Q |
502 |
atctattatcttttctagctttctagaatcacttaaatccaatcttctcagattgggaagatactgtgacatgaaaagccaagaaaaata |
591 |
Q |
| |
|
|||| ||||||||||||||| | || ||||||| |||||||||||||| ||||||||||| |||||||||||||| |||| ||||||| |
|
|
| T |
6998 |
atcttctatcttttctagcttcttggagtcacttagatccaatcttctcaaattgggaagatgctgtgacatgaaaaaccaacaaaaata |
7087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 147; Significance: 4e-77; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 32 - 274
Target Start/End: Complemental strand, 17440880 - 17440638
Alignment:
| Q |
32 |
ctcatctcgttcccgcccaatagtggtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagc |
131 |
Q |
| |
|
|||| ||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||| |||||| |
|
|
| T |
17440880 |
ctcaactcgttcccgcccgatagcggtaggaaaaggaagttgaggcaaagattccaacaacttgcaatgctgcaaatttaaatatacaagtttcgaaagc |
17440781 |
T |
|
| Q |
132 |
ttcctcaggctaggtagtgtcacaaaatagtttccccctaaatttaatctttctagcgaatgtaaacattcaattgaatcaggaacatggcttagacggc |
231 |
Q |
| |
|
||||||||||||||||||||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||| ||| || || ||||||||||||| |
|
|
| T |
17440780 |
ttcctcaggctaggtagtgtcgcaaaatcatttccccctaaatttaatctttctacccaatgtaaacattcaattgtatccggcacttggcttagacggc |
17440681 |
T |
|
| Q |
232 |
aatagctaatgtcaatgctacgcaaacaatataagctatgcaa |
274 |
Q |
| |
|
|| | |||||||||| |||||||||||||||||||||||| |
|
|
| T |
17440680 |
aaaaactaatgtcaacttcacgcaaacaatataagctatgcaa |
17440638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 295 - 578
Target Start/End: Complemental strand, 17440506 - 17440228
Alignment:
| Q |
295 |
taaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatcttttacatt |
394 |
Q |
| |
|
||||||||||| |||||| | || |||||||| || |||||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| || |
|
|
| T |
17440506 |
taaacactttgaaacaacatcgcatatttagatattcaagagagctaagacagaatatgttgttgggtatgcttactagattatagcaatcttttaagtt |
17440407 |
T |
|
| Q |
395 |
caagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaact |
494 |
Q |
| |
|
|||||||||||||||||||| ||| ||||| ||| |||||| |||||||| || | ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
17440406 |
caagtaaacaagctttcttagaagt-----ccaattgatggatccaattccacaagtctttcacatccttccaaatttaaccactcaagatttgggaact |
17440312 |
T |
|
| Q |
495 |
ctccaaaatctattatcttttctagctttctagaatcacttaaatccaatcttctcagattgggaagatactgtgacatgaaaa |
578 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
17440311 |
ctccaaaatccattatcttttctagctttctagagtcacttagatccaatcttctcaaattgggaagatactgtgacataaaaa |
17440228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 86; Significance: 9e-41; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 64 - 228
Target Start/End: Original strand, 31157257 - 31157421
Alignment:
| Q |
64 |
aaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctaggtagtgtcacaaaatagtt |
163 |
Q |
| |
|
||||||||||||||||||||||||| | |||||| || ||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||| |
|
|
| T |
31157257 |
aaggaagttgaggcaaagattccaaaagcttgcaatgctccaagtttaaatatacaagtttggaaagctccctcaggctaggcagtgtcacaaaattgtt |
31157356 |
T |
|
| Q |
164 |
tccccctaaatttaatctttctag-cgaatgtaaacattcaattgaatcaggaacatggcttagac |
228 |
Q |
| |
|
||||||| ||||||||||||||| |||| ||| |||| |||||| |||||| | || |||||||| |
|
|
| T |
31157357 |
cccccctatatttaatctttctagtcgaa-gtagacatccaattgcatcagggagatagcttagac |
31157421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 31499016 - 31498873
Alignment:
| Q |
64 |
aaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctaggtagtgtcacaaaatagtt |
163 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| ||||| || |||||| |||||||||||||||| | |||||||||||||| ||||||||| | ||| |
|
|
| T |
31499016 |
aaggaagttgaggcaaagattccaacaatttgcaatgttctaagtttaaacatacaagtttggaaaggtccctcaggctaggtaatgtcacaaacttgtt |
31498917 |
T |
|
| Q |
164 |
tccccctaaatttaatctttctagcgaatgtaaacattcaattg |
207 |
Q |
| |
|
||||||||||||||| ||||| | ||||||||||| |||||| |
|
|
| T |
31498916 |
tccccctaaatttaactcttctaaccaatgtaaacatccaattg |
31498873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 31148343 - 31148486
Alignment:
| Q |
64 |
aaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctaggtagtgtcacaaaatagtt |
163 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| || || | ||| ||||||||| ||||| |||| |||||||| |||||||||| |||||||||| ||| |
|
|
| T |
31148343 |
aaggaagttgaggcaacgatttcaacaacttacaatgctgcaagtttaaatatgcaagtctggatagcttcctaaggctaggtaccgtcacaaaattgtt |
31148442 |
T |
|
| Q |
164 |
tccccctaaatttaatctttctagcgaatgtaaacattcaattg |
207 |
Q |
| |
|
|||||||| |||||||||||||||| || |||||| | |||||| |
|
|
| T |
31148443 |
tccccctagatttaatctttctagccaacgtaaacgtccaattg |
31148486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 57 - 178
Target Start/End: Complemental strand, 31504153 - 31504032
Alignment:
| Q |
57 |
gtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctaggtagtgtcacaa |
156 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
31504153 |
gtaggagaaggaagaacaggcaaagattccaacagtttgcaatgctccaagtttaaatatacaagtttggaaagctccctcaggctaggtactgtcacaa |
31504054 |
T |
|
| Q |
157 |
aatagtttccccctaaatttaa |
178 |
Q |
| |
|
||| ||||||||||| ||||| |
|
|
| T |
31504053 |
aattatttccccctaagtttaa |
31504032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 57 - 179
Target Start/End: Complemental strand, 31478968 - 31478846
Alignment:
| Q |
57 |
gtaggggaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctaggtagtgtcacaa |
156 |
Q |
| |
|
||||| ||||||||| ||||||||||| ||||| |||||| || || || |||||||||||||||| ||||||| |||||| ||||||| |||||||| |
|
|
| T |
31478968 |
gtaggagaaggaagtacaggcaaagatttcaacagcttgcaatgctctaagcttaaatatacaagttttgaaagctccctcagactaggtactgtcacaa |
31478869 |
T |
|
| Q |
157 |
aatagtttccccctaaatttaat |
179 |
Q |
| |
|
||| ||||||||||||||||||| |
|
|
| T |
31478868 |
aattgtttccccctaaatttaat |
31478846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 292 - 414
Target Start/End: Complemental strand, 31498731 - 31498609
Alignment:
| Q |
292 |
tgttaaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatcttttac |
391 |
Q |
| |
|
|||||||||||| |||||| |||| || ||||||||||| |||| |||| |||| ||||||||||||||||||||||| ||||| | |||||||||| |
|
|
| T |
31498731 |
tgttaaacacttcggaacacccacacatatttagatctttaagaaagctgagaccaaatatgttgttgggtatgcttacaagattcttgcaatcttttaa |
31498632 |
T |
|
| Q |
392 |
attcaagtaaacaagctttctta |
414 |
Q |
| |
|
||||||| |||||| |||||||| |
|
|
| T |
31498631 |
attcaaggaaacaatctttctta |
31498609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 63 - 180
Target Start/End: Complemental strand, 31472507 - 31472390
Alignment:
| Q |
63 |
gaaggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctaggtagtgtcacaaaatagt |
162 |
Q |
| |
|
|||||||||| ||||||||||| |||| | || ||||| || ||||||||||||||||||||||||| |||| ||||||||| ||||||||||| | |
|
|
| T |
31472507 |
gaaggaagtttaggcaaagatttcaactgcgggcgatgttctaagtttaaatatacaagtttggaaagctccctcgggctaggtactgtcacaaaattat |
31472408 |
T |
|
| Q |
163 |
ttccccctaaatttaatc |
180 |
Q |
| |
|
| || |||| |||||||| |
|
|
| T |
31472407 |
tccctcctacatttaatc |
31472390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 291 - 414
Target Start/End: Original strand, 31157604 - 31157727
Alignment:
| Q |
291 |
ttgttaaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaatctttta |
390 |
Q |
| |
|
|||||||||||||||||||| || | |||||||| || ||||||||| |||| | ||||||||| ||||||||||| ||||||| |||||||| | |
|
|
| T |
31157604 |
ttgttaaacactttggaacacccggaaagatttagatatttaagagagctgagaccaagtatgttgttcggtatgcttactagatttttgcaatctttca |
31157703 |
T |
|
| Q |
391 |
cattcaagtaaacaagctttctta |
414 |
Q |
| |
|
|||| | ||||||||||||||| |
|
|
| T |
31157704 |
atttcatgaaaacaagctttctta |
31157727 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 503
Target Start/End: Complemental strand, 31478602 - 31478485
Alignment:
| Q |
381 |
caatcttttacattcaagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactc |
480 |
Q |
| |
|
|||||||| | |||||||||||||||||| ||||||| || || |||| |||||||| |||||| |||| |||||||||| || || || ||| |
|
|
| T |
31478602 |
caatctttcaaattcaagtaaacaagcttcgttaaaag-----actaagagatggatccaactgcacaagttttatacatccttccagatctagccgctc |
31478508 |
T |
|
| Q |
481 |
aagattcgggaactctccaaaat |
503 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
31478507 |
aagattcgggaactctccaaaat |
31478485 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 31032528 - 31032620
Alignment:
| Q |
291 |
ttgttaaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcacaa |
383 |
Q |
| |
|
|||||||||||||||||||| || | |||||||| || ||||||| | |||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
31032528 |
ttgttaaacactttggaacacccggaaagatttagatatttaagagaggtgagaccaaatatgttgttgggtatgcttattagattttcacaa |
31032620 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 427 - 506
Target Start/End: Complemental strand, 31484382 - 31484303
Alignment:
| Q |
427 |
aatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaactctccaaaatcta |
506 |
Q |
| |
|
|||| ||| ||||| ||||||||| ||||| |||||||| | ||||||| ||||||||| |||| |||||||||||||| |
|
|
| T |
31484382 |
aataaatagatccatctccacaagttttacacatccttcaaggtttaaccgctcaagatttgggacctctccaaaatcta |
31484303 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 31526532 - 31526569
Alignment:
| Q |
149 |
tgtcacaaaatagtttccccctaaatttaatctttcta |
186 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
31526532 |
tgtcacaaaattgtttccccctaaatttaatctttcta |
31526569 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 533 - 605
Target Start/End: Complemental strand, 31471958 - 31471886
Alignment:
| Q |
533 |
cttaaatccaatcttctcagattgggaagatactgtgacatgaaaagccaagaaaaataaatacattactttg |
605 |
Q |
| |
|
|||| |||||| |||||| |||||| ||||||||||||||||||| ||| ||||||| | ||||||||||| |
|
|
| T |
31471958 |
cttagatccaaatttctcaaattgggcagatactgtgacatgaaaaatcaacaaaaatagagacattactttg |
31471886 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 435 - 503
Target Start/End: Complemental strand, 31472056 - 31471988
Alignment:
| Q |
435 |
aatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaactctccaaaat |
503 |
Q |
| |
|
||||||||| |||||| |||| |||||||||| || || || ||||||||| |||||||||||||||| |
|
|
| T |
31472056 |
aatccaactgcacaagttttatacatccttccagatctagccgctcaagatttgggaactctccaaaat |
31471988 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 393 - 503
Target Start/End: Complemental strand, 31503743 - 31503638
Alignment:
| Q |
393 |
ttcaagtaaacaagctttcttaaaagctgcgaccaatagataaatccaactccacaaggtttacgcatccttccaaatttaaccactcaagattcgggaa |
492 |
Q |
| |
|
|||||||||||||||||| ||| || ||||||||||| ||| | || |||||| |||| |||||||||| || || || |||||| |||||||| |
|
|
| T |
31503743 |
ttcaagtaaacaagctttgttagaa-----gaccaatagatggatctatctgcacaagttttatacatccttccagatctagccgctcaaggttcgggaa |
31503649 |
T |
|
| Q |
493 |
ctctccaaaat |
503 |
Q |
| |
|
||||||||||| |
|
|
| T |
31503648 |
ctctccaaaat |
31503638 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 31017634 - 31017691
Alignment:
| Q |
110 |
taaatatacaagtttggaaagcttcctcaggctaggtagtgtcacaaaatagtttccc |
167 |
Q |
| |
|
||||||||||||||| ||||||| ||| || ||||| || |||||||||| ||||||| |
|
|
| T |
31017634 |
taaatatacaagtttagaaagctccctgagactaggcagagtcacaaaattgtttccc |
31017691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 382
Target Start/End: Original strand, 31017946 - 31018035
Alignment:
| Q |
293 |
gttaaacactttggaacaaccacccaaatttagatcttgaagagagctaagactgaatatgttgttgggtatgcttaccagattttcaca |
382 |
Q |
| |
|
|||||||||||||||||| ||| | |||||||| || ||||||| | ||| |||||| ||||||||||||||| ||||||| |||| |
|
|
| T |
31017946 |
gttaaacactttggaacacccagaaagatttagatatttaagagaggtgagaacaaatatgctgttgggtatgcttatcagatttacaca |
31018035 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 65 - 183
Target Start/End: Complemental strand, 6785354 - 6785236
Alignment:
| Q |
65 |
aggaagttgaggcaaagattccaacaacttgcagtgttccaaatttaaatatacaagtttggaaagcttcctcaggctaggtagtgtcacaaaatagttt |
164 |
Q |
| |
|
|||||| | ||||||| ||| ||||||||||||||| ||||| ||||||||||| ||||||||||||| | |||||||||| | ||||||||||| |||| |
|
|
| T |
6785354 |
aggaagatcaggcaaatatttcaacaacttgcagtgatccaagtttaaatatacgagtttggaaagctccttcaggctaggcaatgtcacaaaatggttt |
6785255 |
T |
|
| Q |
165 |
ccccctaaatttaatcttt |
183 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
6785254 |
ccccctaaatttaatcttt |
6785236 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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