View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20545_low_15 (Length: 251)
Name: NF20545_low_15
Description: NF20545
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20545_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 2 - 247
Target Start/End: Complemental strand, 9204081 - 9203836
Alignment:
| Q |
2 |
ggatgtcgaagaatatagcataaaataaaatggggaatatacatgctaaagagaaatatcacccaatgatttaaaaacatcattttacagaagtataacg |
101 |
Q |
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| T |
9204081 |
ggatgccgaagaatacagcataaaataaaatggggaatatacatgctaaagagaaatatcacccaatgatttaaaaacatcattttacagaattataacg |
9203982 |
T |
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| Q |
102 |
gaaatttgaaagaattaatcacctgactaaggagtttaggcttgtcaattgttgaaaaggtaatctcgtgcatgggcctaaaatgtaataagtgagaaga |
201 |
Q |
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| T |
9203981 |
gaaatttgaaagaattaatcacctgactaaggagtttaggcttgtcaattgttgaaaaggtaatctcgtgcatgggcctaaaatgtaataagtgagaaga |
9203882 |
T |
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| Q |
202 |
tcagtaccagtcaaaattttaaacaaaaatagcgtaaagcatttat |
247 |
Q |
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| T |
9203881 |
tcagtaccagtcaaaattttaaacaacaatagcgtaaagcatttat |
9203836 |
T |
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