View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20548_high_8 (Length: 381)

Name: NF20548_high_8
Description: NF20548
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20548_high_8
NF20548_high_8
[»] chr4 (57 HSPs)
chr4 (15-243)||(50545651-50545879)
chr4 (243-299)||(31218305-31218360)
chr4 (247-356)||(38574233-38574343)
chr4 (243-299)||(46046748-46046802)
chr4 (243-299)||(9619303-9619358)
chr4 (243-299)||(41946964-41947019)
chr4 (243-299)||(46046429-46046484)
chr4 (247-356)||(3018014-3018125)
chr4 (243-354)||(37012974-37013085)
chr4 (243-299)||(9397022-9397077)
chr4 (245-297)||(9516611-9516662)
chr4 (258-356)||(15640729-15640828)
chr4 (244-356)||(26252502-26252615)
chr4 (242-356)||(38573967-38574081)
chr4 (243-299)||(48259822-48259877)
chr4 (243-356)||(3273620-3273735)
chr4 (258-356)||(9618993-9619093)
chr4 (258-354)||(31943962-31944061)
chr4 (245-299)||(35376164-35376217)
chr4 (244-301)||(3273941-3273996)
chr4 (321-381)||(9619129-9619190)
chr4 (244-297)||(41947180-41947232)
chr4 (244-296)||(9516937-9516988)
chr4 (243-299)||(31090385-31090440)
chr4 (249-293)||(48580196-48580239)
chr4 (243-297)||(13132265-13132318)
chr4 (243-293)||(18667620-18667669)
chr4 (244-356)||(31090060-31090174)
chr4 (245-299)||(34063983-34064036)
chr4 (258-299)||(3018334-3018375)
chr4 (243-296)||(7819347-7819399)
chr4 (247-296)||(9396702-9396750)
chr4 (243-296)||(31944277-31944329)
chr4 (258-299)||(35376451-35376492)
chr4 (321-381)||(37012874-37012935)
chr4 (243-299)||(12904746-12904801)
chr4 (245-293)||(15641046-15641093)
chr4 (243-299)||(36887679-36887734)
chr4 (258-301)||(12520650-12520693)
chr4 (258-292)||(31083428-31083462)
chr4 (247-296)||(7819018-7819066)
chr4 (321-381)||(9396849-9396910)
chr4 (311-356)||(9516678-9516723)
chr4 (311-356)||(13132206-13132251)
chr4 (311-356)||(18713028-18713073)
chr4 (258-299)||(20069622-20069663)
chr4 (311-356)||(37012775-37012820)
chr4 (321-381)||(38574135-38574196)
chr4 (258-299)||(43313535-43313576)
chr4 (311-356)||(48580131-48580176)
chr4 (258-299)||(51029097-51029138)
chr4 (249-293)||(4356210-4356253)
chr4 (311-355)||(9619245-9619289)
chr4 (247-299)||(13131943-13131994)
chr4 (312-356)||(26252337-26252381)
chr4 (263-299)||(43312227-43312263)
chr4 (267-299)||(53896468-53896500)
[»] chr6 (29 HSPs)
chr6 (15-243)||(10413385-10413613)
chr6 (16-162)||(11349075-11349222)
chr6 (243-356)||(32017769-32017882)
chr6 (244-356)||(9481182-9481295)
chr6 (243-299)||(24731934-24731989)
chr6 (243-356)||(18500314-18500427)
chr6 (243-297)||(18500655-18500708)
chr6 (258-299)||(10321746-10321787)
chr6 (247-299)||(26385598-26385649)
chr6 (244-297)||(26385278-26385330)
chr6 (243-295)||(2299641-2299692)
chr6 (243-356)||(30617966-30618075)
chr6 (258-356)||(9854152-9854250)
chr6 (243-286)||(24732274-24732316)
chr6 (258-293)||(33714496-33714531)
chr6 (257-299)||(2299352-2299394)
chr6 (321-381)||(3230030-3230091)
chr6 (258-299)||(21069527-21069568)
chr6 (321-381)||(26385445-26385506)
chr6 (245-297)||(19284130-19284181)
chr6 (257-297)||(34113591-34113631)
chr6 (321-381)||(17142805-17142866)
chr6 (311-356)||(19284197-19284242)
chr6 (311-356)||(24732203-24732248)
chr6 (311-356)||(26385346-26385391)
chr6 (258-295)||(30458913-30458950)
chr6 (311-356)||(33714555-33714600)
chr6 (257-301)||(15942459-15942503)
chr6 (321-381)||(30618112-30618172)
[»] chr1 (41 HSPs)
chr1 (243-356)||(18462285-18462398)
chr1 (243-356)||(17606573-17606685)
chr1 (243-356)||(39711337-39711451)
chr1 (243-299)||(33629014-33629069)
chr1 (244-299)||(18342341-18342395)
chr1 (243-298)||(33628689-33628743)
chr1 (243-356)||(4906961-4907075)
chr1 (243-296)||(29696564-29696616)
chr1 (247-299)||(17606307-17606358)
chr1 (243-299)||(20995697-20995752)
chr1 (243-356)||(24467628-24467741)
chr1 (243-356)||(34749137-34749250)
chr1 (244-299)||(39826370-39826424)
chr1 (244-356)||(39711074-39711185)
chr1 (243-354)||(30299231-30299342)
chr1 (243-295)||(52058336-52058387)
chr1 (244-299)||(8292804-8292858)
chr1 (243-356)||(8293072-8293187)
chr1 (257-296)||(17500781-17500820)
chr1 (258-301)||(17502051-17502094)
chr1 (258-301)||(37236731-37236774)
chr1 (244-299)||(39970970-39971024)
chr1 (258-297)||(42510341-42510380)
chr1 (244-295)||(52058011-52058061)
chr1 (258-356)||(4907227-4907327)
chr1 (243-297)||(27039637-27039690)
chr1 (243-356)||(30252163-30252279)
chr1 (264-356)||(42510034-42510127)
chr1 (243-297)||(48072287-48072340)
chr1 (321-381)||(17606458-17606519)
chr1 (243-296)||(29696884-29696936)
chr1 (244-297)||(34749431-34749483)
chr1 (258-295)||(43539675-43539712)
chr1 (244-296)||(13230059-13230110)
chr1 (243-295)||(18462612-18462663)
chr1 (243-299)||(39826049-39826104)
chr1 (243-356)||(20995933-20996046)
chr1 (244-356)||(24467892-24468002)
chr1 (311-356)||(17606376-17606421)
chr1 (311-355)||(39826312-39826356)
chr1 (243-299)||(43400752-43400807)
[»] chr8 (40 HSPs)
chr8 (243-356)||(10108369-10108483)
chr8 (244-356)||(14820295-14820407)
chr8 (243-299)||(5554868-5554923)
chr8 (235-299)||(21147927-21147990)
chr8 (244-299)||(43851665-43851719)
chr8 (243-356)||(10108635-10108749)
chr8 (243-356)||(14820559-14820673)
chr8 (244-297)||(18044153-18044205)
chr8 (243-299)||(10171467-10171522)
chr8 (243-297)||(7689849-7689902)
chr8 (243-299)||(21148260-21148315)
chr8 (243-299)||(30789831-30789886)
chr8 (258-356)||(5555134-5555234)
chr8 (243-297)||(7689523-7689576)
chr8 (243-301)||(20877067-20877124)
chr8 (258-299)||(30789521-30789562)
chr8 (258-299)||(42112998-42113039)
chr8 (243-296)||(42606080-42606132)
chr8 (243-296)||(43481642-43481694)
chr8 (243-299)||(17622889-17622944)
chr8 (243-299)||(26136684-26136739)
chr8 (243-299)||(35367409-35367464)
chr8 (243-356)||(26136950-26137063)
chr8 (243-301)||(38726686-38726743)
chr8 (243-295)||(42113309-42113360)
chr8 (312-355)||(22494454-22494497)
chr8 (263-301)||(21144827-21144865)
chr8 (347-381)||(22494561-22494595)
chr8 (347-381)||(43851831-43851865)
chr8 (321-381)||(2583470-2583531)
chr8 (321-381)||(14767674-14767735)
chr8 (321-381)||(17623054-17623115)
chr8 (311-356)||(21148005-21148050)
chr8 (258-299)||(40486642-40486683)
chr8 (258-299)||(40487738-40487779)
chr8 (321-381)||(42113151-42113212)
chr8 (243-295)||(1949651-1949702)
chr8 (247-295)||(17623214-17623261)
chr8 (311-355)||(30789773-30789817)
chr8 (312-356)||(42605822-42605866)
[»] chr3 (55 HSPs)
chr3 (243-356)||(9266974-9267088)
chr3 (243-356)||(30500042-30500154)
chr3 (243-299)||(14171910-14171965)
chr3 (243-299)||(14262360-14262415)
chr3 (243-356)||(30500306-30500419)
chr3 (241-299)||(27946189-27946246)
chr3 (243-296)||(16721990-16722042)
chr3 (243-356)||(16722256-16722370)
chr3 (243-356)||(35995677-35995791)
chr3 (244-356)||(5800605-5800718)
chr3 (243-299)||(19112763-19112818)
chr3 (243-299)||(45969914-45969969)
chr3 (244-299)||(14162194-14162248)
chr3 (244-299)||(19720333-19720387)
chr3 (243-296)||(49986526-49986578)
chr3 (243-299)||(9267298-9267353)
chr3 (243-299)||(11003731-11003786)
chr3 (244-356)||(14161871-14161984)
chr3 (243-299)||(35995999-35996054)
chr3 (243-299)||(45970240-45970295)
chr3 (258-297)||(14262049-14262088)
chr3 (244-299)||(19113089-19113143)
chr3 (259-356)||(45003761-45003859)
chr3 (243-293)||(20853694-20853743)
chr3 (249-299)||(27946114-27946163)
chr3 (243-356)||(21633161-21633275)
chr3 (243-356)||(43572388-43572502)
chr3 (244-356)||(5800870-5800982)
chr3 (243-299)||(24490243-24490298)
chr3 (243-295)||(33372405-33372456)
chr3 (258-298)||(35740830-35740870)
chr3 (243-295)||(49986856-49986907)
chr3 (243-298)||(3425973-3426027)
chr3 (243-356)||(20853961-20854074)
chr3 (243-293)||(14171586-14171635)
chr3 (243-284)||(21632900-21632940)
chr3 (258-299)||(35741908-35741949)
chr3 (258-299)||(36990983-36991024)
chr3 (258-299)||(37016423-37016464)
chr3 (244-301)||(45003496-45003552)
chr3 (243-299)||(3424773-3424828)
chr3 (247-295)||(17649337-17649384)
chr3 (243-295)||(33372732-33372783)
chr3 (258-297)||(38283563-38283602)
chr3 (245-356)||(52552953-52553065)
chr3 (243-293)||(17465697-17465746)
chr3 (321-381)||(11003882-11003943)
chr3 (311-356)||(14262104-14262149)
chr3 (321-381)||(15328610-15328671)
chr3 (311-356)||(19112833-19112878)
chr3 (311-356)||(20853764-20853809)
chr3 (321-381)||(43572541-43572602)
chr3 (243-295)||(17465366-17465417)
chr3 (243-295)||(43572718-43572769)
chr3 (322-381)||(47575439-47575499)
[»] chr7 (48 HSPs)
chr7 (244-356)||(20419536-20419649)
chr7 (243-356)||(23704926-23705039)
chr7 (243-355)||(20963760-20963872)
chr7 (243-356)||(28218428-28218542)
chr7 (243-356)||(41600223-41600337)
chr7 (243-299)||(28218177-28218232)
chr7 (243-299)||(12006540-12006595)
chr7 (244-299)||(20419861-20419915)
chr7 (244-293)||(23704662-23704710)
chr7 (244-356)||(38879989-38880099)
chr7 (243-299)||(20458691-20458746)
chr7 (245-296)||(44816832-44816884)
chr7 (243-299)||(48672603-48672658)
chr7 (244-299)||(6465855-6465909)
chr7 (244-357)||(16995200-16995313)
chr7 (244-356)||(23383499-23383613)
chr7 (244-356)||(38879723-38879837)
chr7 (243-356)||(12006805-12006919)
chr7 (243-356)||(23383765-23383879)
chr7 (244-297)||(24195198-24195250)
chr7 (244-297)||(41599958-41600010)
chr7 (243-296)||(48672276-48672328)
chr7 (243-299)||(10409697-10409752)
chr7 (243-299)||(14646974-14647029)
chr7 (243-291)||(20459022-20459069)
chr7 (243-295)||(25772363-25772414)
chr7 (245-296)||(7658292-7658342)
chr7 (243-297)||(33162862-33162915)
chr7 (243-296)||(31852157-31852209)
chr7 (247-299)||(7657972-7658023)
chr7 (243-299)||(25772655-25772710)
chr7 (311-381)||(24194931-24195002)
chr7 (258-296)||(1250533-1250571)
chr7 (347-381)||(20419703-20419737)
chr7 (312-354)||(31851506-31851548)
chr7 (321-381)||(1250373-1250434)
chr7 (311-356)||(1250471-1250516)
chr7 (243-296)||(6466132-6466184)
chr7 (258-299)||(20963507-20963548)
chr7 (311-356)||(20963563-20963608)
chr7 (321-381)||(20963662-20963723)
chr7 (258-299)||(23258248-23258289)
chr7 (311-356)||(24195061-24195106)
chr7 (311-356)||(28218247-28218292)
chr7 (243-299)||(14630335-14630390)
chr7 (322-381)||(23704812-23704872)
chr7 (263-299)||(33131651-33131687)
chr7 (245-297)||(48648263-48648314)
[»] chr5 (39 HSPs)
chr5 (243-353)||(14143901-14144011)
chr5 (243-299)||(14411696-14411751)
chr5 (243-299)||(17762282-17762337)
chr5 (244-356)||(23979166-23979279)
chr5 (243-356)||(24837168-24837282)
chr5 (245-356)||(993751-993860)
chr5 (245-297)||(41001678-41001729)
chr5 (244-299)||(24837493-24837547)
chr5 (243-297)||(24651025-24651078)
chr5 (243-296)||(7126244-7126296)
chr5 (243-356)||(24074302-24074416)
chr5 (259-355)||(41001370-41001465)
chr5 (243-299)||(6817122-6817177)
chr5 (243-299)||(17762606-17762661)
chr5 (244-356)||(31799640-31799753)
chr5 (244-299)||(18336780-18336833)
chr5 (249-356)||(27159222-27159327)
chr5 (243-297)||(31799965-31800018)
chr5 (243-356)||(4918988-4919103)
chr5 (244-299)||(18336467-18336521)
chr5 (258-297)||(29445131-29445170)
chr5 (245-295)||(4919317-4919366)
chr5 (249-299)||(7125923-7125972)
chr5 (321-381)||(7126084-7126145)
chr5 (311-356)||(7126182-7126227)
chr5 (243-356)||(14144166-14144280)
chr5 (246-353)||(24650704-24650810)
chr5 (243-299)||(30512287-30512342)
chr5 (243-299)||(30552627-30552682)
chr5 (311-354)||(6817388-6817431)
chr5 (244-356)||(994011-994123)
chr5 (321-381)||(14144051-14144112)
chr5 (258-299)||(22571090-22571131)
chr5 (311-356)||(24074567-24074612)
chr5 (243-296)||(27158990-27159042)
chr5 (258-299)||(29444819-29444860)
chr5 (243-299)||(14411989-14412044)
chr5 (322-381)||(20709379-20709439)
chr5 (243-299)||(20709535-20709590)
[»] chr2 (45 HSPs)
chr2 (244-356)||(23806217-23806330)
chr2 (243-356)||(19251470-19251583)
chr2 (243-356)||(17463356-17463470)
chr2 (244-301)||(17850587-17850643)
chr2 (242-356)||(26236360-26236474)
chr2 (258-356)||(26560569-26560667)
chr2 (244-356)||(15106332-15106443)
chr2 (243-296)||(17850913-17850965)
chr2 (243-296)||(22263520-22263572)
chr2 (243-299)||(19251793-19251848)
chr2 (244-352)||(23854688-23854797)
chr2 (244-292)||(23855025-23855072)
chr2 (258-301)||(12419044-12419087)
chr2 (258-301)||(12431104-12431147)
chr2 (241-299)||(39878100-39878156)
chr2 (244-299)||(42670717-42670771)
chr2 (258-296)||(13254763-13254801)
chr2 (258-299)||(26135830-26135871)
chr2 (245-298)||(26560880-26560932)
chr2 (243-299)||(20498746-20498801)
chr2 (258-356)||(22263205-22263304)
chr2 (243-299)||(26236126-26236181)
chr2 (258-297)||(30959997-30960036)
chr2 (244-299)||(42671043-42671097)
chr2 (258-296)||(17463105-17463143)
chr2 (243-301)||(23046706-23046763)
chr2 (257-299)||(33290061-33290103)
chr2 (258-299)||(13284737-13284778)
chr2 (243-292)||(23047913-23047961)
chr2 (244-297)||(26136143-26136195)
chr2 (258-299)||(30958697-30958738)
chr2 (243-292)||(44097737-44097786)
chr2 (312-356)||(30390528-30390572)
chr2 (243-294)||(13284411-13284461)
chr2 (244-299)||(15106067-15106121)
chr2 (258-356)||(33290314-33290412)
chr2 (244-299)||(34548574-34548628)
chr2 (244-299)||(39878397-39878450)
chr2 (314-356)||(22263456-22263498)
chr2 (311-356)||(17850851-17850896)
chr2 (321-381)||(22263358-22263419)
chr2 (258-299)||(30390472-30390513)
chr2 (243-299)||(13254496-13254551)
chr2 (312-356)||(42670788-42670832)
chr2 (244-292)||(44098953-44099000)
[»] scaffold0117 (1 HSPs)
scaffold0117 (249-355)||(12248-12355)
[»] scaffold0449 (2 HSPs)
scaffold0449 (243-299)||(7524-7579)
scaffold0449 (245-356)||(7227-7339)
[»] scaffold0185 (1 HSPs)
scaffold0185 (243-299)||(3868-3923)
[»] scaffold0809 (2 HSPs)
scaffold0809 (242-301)||(1728-1786)
scaffold0809 (243-299)||(1410-1465)
[»] scaffold0361 (2 HSPs)
scaffold0361 (243-356)||(4828-4941)
scaffold0361 (243-299)||(4561-4616)
[»] scaffold0141 (2 HSPs)
scaffold0141 (243-298)||(8324-8378)
scaffold0141 (244-299)||(8646-8700)
[»] scaffold0477 (3 HSPs)
scaffold0477 (243-297)||(4879-4932)
scaffold0477 (258-297)||(5073-5112)
scaffold0477 (311-356)||(5013-5058)
[»] scaffold0352 (2 HSPs)
scaffold0352 (243-301)||(4666-4723)
scaffold0352 (243-299)||(6003-6058)
[»] scaffold0176 (1 HSPs)
scaffold0176 (243-296)||(15955-16007)
[»] scaffold0157 (1 HSPs)
scaffold0157 (258-301)||(224-267)
[»] scaffold0881 (2 HSPs)
scaffold0881 (243-295)||(218-269)
scaffold0881 (243-299)||(541-596)


Alignment Details
Target: chr4 (Bit Score: 157; Significance: 2e-83; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 15 - 243
Target Start/End: Complemental strand, 50545879 - 50545651
Alignment:
Q  15 caggtacaagtggttacagatacacttaatgagttttgttctgcttcgggtttgaattttaatgtgaccaaatcaaaagcaatgtgttccaagagggtgt 114  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||| ||||||||||||||||||||     
T  50545879 caggtacaaatggttattgatacacttaatgagttttgttctgcttcgggtttgaaagttaatgtgacaaaatcaaaatcaatgtgttccaagagggtgc 50545780  T
Q  115 tagagagaactaaaagagatattcagggtatctcatcgatccgtttggtttctaacttgggccattacttaggttttcatttagtttaagagagagttac 214  Q
     |||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| ||    
T  50545779 cagagaggactaaaagagatatccagggtatctcgtcgatccgtttggtttctaacttgggccattacttaggttttcctttagttcaagggagagtcac 50545680  T
Q  215 aaaggaaacatacaaggatattattgaga 243  Q
    ||| |||||||||||| ||||||||||||    
T  50545679 aaatgaaacatacaagcatattattgaga 50545651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 31218360 - 31218305
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31218360 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 31218305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 356
Target Start/End: Complemental strand, 38574343 - 38574233
Alignment:
Q  247 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattcttcc 344  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||  ||          ||||||||| |||||||||||| |||||||||||    
T  38574343 taaatacct-tttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttcc 38574245  T
Q  345 atttttggtccc 356  Q
    | ||||||||||    
T  38574244 acttttggtccc 38574233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 46046802 - 46046748
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  46046802 agggtaaatacct--ttttcgtccctgtaatattagcgaattccggttttagtccct 46046748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 9619358 - 9619303
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  9619358 agggtaaatacctcttttt-gtccctgtaatattagcgaattctggttttagtccct 9619303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 41946964 - 41947019
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  41946964 agggtaaatacctctttt-cgtccctgtaatattagtgaattccggttttagtccct 41947019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 46046429 - 46046484
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  46046429 agggtaaatacct-tttttcgtccctgtaatattagcgaattccgattttagtccct 46046484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 356
Target Start/End: Original strand, 3018014 - 3018125
Alignment:
Q  247 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn---tttagatttagtccctgtaattccatattcttc 343  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||  |            ||||||||| |||||||||||| ||||||||||    
T  3018014 taaatacctctttt-cgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 3018112  T
Q  344 catttttggtccc 356  Q
    || ||||||||||    
T  3018113 cacttttggtccc 3018125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 243 - 354
Target Start/End: Complemental strand, 37013085 - 37012974
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||| |           |||||||| |||||||||||| ||||||||    
T  37013085 agggtaaatacctcattt-cgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaaaattagattttgtccctgtaatttcatattct 37012987  T
Q  342 tccatttttggtc 354  Q
    |||| ||||||||    
T  37012986 tccacttttggtc 37012974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 9397077 - 9397022
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  9397077 agggtaaatacttctttt-cgtccctgtaatattagcaaattccggttttagtccct 9397022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 9516611 - 9516662
Alignment:
Q  245 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  9516611 ggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttagtcc 9516662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 15640729 - 15640828
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    |||||||||||||||||||||||||||||||||||||| ||| |          ||||||||| |||||||||||| ||||||||| || ||||||||||    
T  15640729 ttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattctttcacttttggtccc 15640828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 26252615 - 26252502
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||  ||          ||||||||| |||||||||||| ||||||||    
T  26252615 gggtaaatatctctttt-cgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 26252517  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  26252516 tccacttttggtccc 26252502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 242 - 356
Target Start/End: Original strand, 38573967 - 38574081
Alignment:
Q  242 gagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||| |          ||||||||| |||||||||||| |||||||    
T  38573967 gagggtaaatacctctttt-cgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaagatttagattttgtccctgtaatttcatattc 38574065  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  38574066 ttccacttttggtccc 38574081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 48259822 - 48259877
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||    
T  48259822 agggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttaatccct 48259877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 3273620 - 3273735
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnnttt---agatttagtccctgtaattccatatt 339  Q
    |||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||  |         |||   |||||| |||||||||||| ||||||    
T  3273620 agggtaaatatctctttt-cgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatatt 3273718  T
Q  340 cttccatttttggtccc 356  Q
    |||||| ||||||||||    
T  3273719 cttccacttttggtccc 3273735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 9618993 - 9619093
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtcc 355  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || ||||||||| |||||||||    
T  9618993 ttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttccacttttggtcc 9619092  T
Q  356 c 356  Q
    |    
T  9619093 c 9619093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 354
Target Start/End: Original strand, 31943962 - 31944061
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct---atnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtc 354  Q
    |||||||||||||||||||||||||||||||||||||| |||   |          ||||||||| |||||||||||| |||||||||||| ||||||||    
T  31943962 ttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtc 31944061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 35376164 - 35376217
Alignment:
Q  245 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||    
T  35376164 ggtaaatacctatttt-cgtccctgtaatattagcgaattctggttttagtccct 35376217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 301
Target Start/End: Complemental strand, 3273996 - 3273941
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||||    
T  3273996 gggtaaatacctctttt-cgtccc-gtaatattagcgaatttcggttttagtccctat 3273941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 9619129 - 9619190
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| ||||||| ||| |||||||||||| ||||||||| ||||||||||||||    
T  9619129 gtccctgtaatttcatattcctcccatttttggtccctgtaatttcagattcctccactttt 9619190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 41947232 - 41947180
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  41947232 gggtaaatatctctttt-cgtccctgtaatattagcgaatttcggttttagtcc 41947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 9516988 - 9516937
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||||||||    
T  9516988 gggtaaatatctctttt-cgtccctgtaatattagcgaatttcggttttagtc 9516937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 31090440 - 31090385
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||| ||||||| ||||||||||||||||||||||| || |||||||||||    
T  31090440 agggtaaatatctctttt-cgtccctgtaatattagcgaatttcgattttagtccct 31090385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 48580239 - 48580196
Alignment:
Q  249 aatacctctttttcgtccctgtaatattagcgaattccggtttta 293  Q
    |||||||||||| ||||||||||||||||||||||||||||||||    
T  48580239 aatacctctttt-cgtccctgtaatattagcgaattccggtttta 48580196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 13132318 - 13132265
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||||||||||| |||| ||||||||||||||||||||||| || |||||||||    
T  13132318 agggtaaatacctatttt-cgtccctgtaatattagcgaatttcgattttagtcc 13132265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 18667669 - 18667620
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 293  Q
    ||||| |||||||||||| ||||||||||||||||||||||||| ||||||    
T  18667669 agggttaatacctctttt-cgtccctgtaatattagcgaattccagtttta 18667620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 31090060 - 31090174
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn---tttagatttagtccctgtaattccatattc 340  Q
    |||||||||| ||||||| |||||||||||||||| ||||| || ||||||||||| |            ||||||||| |||||||||||| |||||||    
T  31090060 gggtaaatacttcttttt-gtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 31090158  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  31090159 ttccacttttggtccc 31090174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 34063983 - 34064036
Alignment:
Q  245 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||| |||||||||||||||| |||||||  ||||||||||||    
T  34063983 ggtaaatacctctttt-cgtccctgtaatattaacgaattctagttttagtccct 34064036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 3018375 - 3018334
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||||| |||||| ||||||||||||||    
T  3018375 ttttcgtccctgtaatattaacgaatttcggttttagtccct 3018334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 7819399 - 7819347
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||| || ||||||||||| |||||||||||||||| |||||||||||    
T  7819399 agggtaaatatct-tttttcgtcccggtaatattagcgaatttcggttttagtc 7819347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 9396702 - 9396750
Alignment:
Q  247 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||||||| ||||||||||||||||||||||| || ||||||||    
T  9396702 taaatacctctttt-cgtccctgtaatattagcgaatttcgattttagtc 9396750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 31944329 - 31944277
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    ||||||||||| |||||| ||||| ||||||||||||||||| |||||||||||    
T  31944329 agggtaaatacttctttt-cgtccttgtaatattagcgaatttcggttttagtc 31944277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 35376492 - 35376451
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||||||| |||||| ||||||||||||    
T  35376492 ttttcgtccctgtaatattagcaaattccagttttagtccct 35376451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 37012935 - 37012874
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| ||||||||||| | |||||||||  ||||||||| ||||||||||||||    
T  37012935 gtccctgtaatttcatattcttcctacttttggtccttgtaatttcaaattcctccactttt 37012874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 12904746 - 12904801
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||| ||||||| ||||||| |||||||||||||||  |||||||||||||    
T  12904746 agggtaaatatctctttt-cgtccctataatattagcgaattttggttttagtccct 12904801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Complemental strand, 15641093 - 15641046
Alignment:
Q  245 ggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 293  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||||    
T  15641093 ggtaaatacctctttt-cgtccttgtaatattagtgaattccggtttta 15641046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 36887679 - 36887734
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||| ||||||||||||  ||||||||||||||||||||||  |||||||||||||    
T  36887679 agggttaatacctcttttg-gtccctgtaatattagcgaattttggttttagtccct 36887734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 301
Target Start/End: Original strand, 12520650 - 12520693
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||    
T  12520650 ttttagtccctataatattagcgaattccagttttagtccctat 12520693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 292
Target Start/End: Complemental strand, 31083462 - 31083428
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggtttt 292  Q
    |||||||||||||||||| ||||||||||||||||    
T  31083462 ttttcgtccctgtaatatgagcgaattccggtttt 31083428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 296
Target Start/End: Original strand, 7819018 - 7819066
Alignment:
Q  247 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||||||| || || | |||||||||||||||||||||||||||    
T  7819018 taaatacctctttt-cgaccatataatattagcgaattccggttttagtc 7819066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 9396849 - 9396910
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| || |||| ||| | ||||| |||| ||||||||||||||||||||||||    
T  9396849 gtccctgtaatttcagattcctcccacttttgatccctgtaatttcatattcctccactttt 9396910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 9516678 - 9516723
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  9516678 tttagattttgtccttgtaatttcatattcttccacttttggtccc 9516723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Complemental strand, 13132251 - 13132206
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||  |||||||||||| |||||||||||| ||||||||||    
T  13132251 tttagattctgtccctgtaatttcatattcttccacttttggtccc 13132206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 18713028 - 18713073
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||    
T  18713028 tttagattttgtccctgtaatttcatattgttccaattttggtccc 18713073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 20069663 - 20069622
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| |||||||||| ||||| ||||||    
T  20069663 ttttcgtccctgtaatatgagcgaattccagttttggtccct 20069622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 37012775 - 37012820
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  37012775 tttagattttgtccctgtaatttcagattcttccacttttggtccc 37012820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 38574196 - 38574135
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| || |||| ||| | |||||||| | ||||||||||||||||||||||||    
T  38574196 gtccctgtaatttcagattcctcccacttttggtctctgtaatttcatattcctccactttt 38574135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 43313576 - 43313535
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| ||| ||||||||||||||||||| |||||||||||||    
T  43313576 ttttggtctctgtaatattagcgaattctggttttagtccct 43313535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Complemental strand, 48580176 - 48580131
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||||||||||| |||||| ||||| ||||||||||    
T  48580176 tttagattttgtccctgtaatttcatattgttccacttttggtccc 48580131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 51029138 - 51029097
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| ||||||||||||| |||||||| ||||||||||||||    
T  51029138 ttttggtccctgtaatatgagcgaatttcggttttagtccct 51029097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 293
Target Start/End: Complemental strand, 4356253 - 4356210
Alignment:
Q  249 aatacctctttttcgtccctgtaatattagcgaattccggtttta 293  Q
    |||||||||||| | ||||||||||||||||||||| ||||||||    
T  4356253 aatacctctttt-catccctgtaatattagcgaatttcggtttta 4356210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 9619289 - 9619245
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtcc 355  Q
    ||||||||| |||| ||||||| |||||||||||| |||||||||    
T  9619289 tttagattttgtccttgtaatttcatattcttccacttttggtcc 9619245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 13131943 - 13131994
Alignment:
Q  247 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||| ||||| |||||||||| |||||| | ||||||||||||    
T  13131943 taaatacctctttt-cgtccttgtaatattaacgaatttctgttttagtccct 13131994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 26252337 - 26252381
Alignment:
Q  312 ttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    |||||||| |||||||||||| || ||||||||| ||||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccc 26252381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 43312227 - 43312263
Alignment:
Q  263 gtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  43312227 gtccctgtaatattagcaaattccgattttagtccct 43312263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 267 - 299
Target Start/End: Original strand, 53896468 - 53896500
Alignment:
Q  267 ctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||| |||||||||||||||||||||||    
T  53896468 ctgtaatatgagcgaattccggttttagtccct 53896500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 153; Significance: 5e-81; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 15 - 243
Target Start/End: Original strand, 10413385 - 10413613
Alignment:
Q  15 caggtacaagtggttacagatacacttaatgagttttgttctgcttcgggtttgaattttaatgtgaccaaatcaaaagcaatgtgttccaagagggtgt 114  Q
    ||||||||||||||||  |||| ||| |||||||||||||||||||||||||||||  |||||||||| ||||||||| ||||||||||||||||||||     
T  10413385 caggtacaagtggttatggatatactcaatgagttttgttctgcttcgggtttgaaagttaatgtgacaaaatcaaaatcaatgtgttccaagagggtga 10413484  T
Q  115 tagagagaactaaaagagatattcagggtatctcatcgatccgtttggtttctaacttgggccattacttaggttttcatttagtttaagagagagttac 214  Q
     |||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||| ||    
T  10413485 cagagaggactaaaagagatatccagggtatctcgtcgatccgtttggtttctaacttgggccattacttaggttttcctttagttcaagggagagtcac 10413584  T
Q  215 aaaggaaacatacaaggatattattgaga 243  Q
    ||| |||||||||||| ||||||||||||    
T  10413585 aaatgaaacatacaagcatattattgaga 10413613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 11349222 - 11349075
Alignment:
Q  16 aggtacaagtggttacagatacacttaatgagttttgttctgcttcgggtttgaattttaatgtgaccaaatcaaaagcaatgtgttccaagagggtgtt 115  Q
    |||||||||||||||  |||||| | ||||||||||| ||| |||  ||||||||  | ||||||| |||||| |||||||||||||| ||||| ||  |    
T  11349222 aggtacaagtggttattgatacattcaatgagttttgatcttctttaggtttgaaagtcaatgtgatcaaatcgaaagcaatgtgttcgaagagagttct 11349123  T
Q  116 agagagaactaaaagagatattcagggtatctca-tcgatccgtttgg 162  Q
     ||||| ||||||||||||||| ||||||||||| | |||||||||||    
T  11349122 ggagaggactaaaagagatatttagggtatctcagttgatccgtttgg 11349075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 32017882 - 32017769
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  32017882 agggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 32017784  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  32017783 tccacttttggtccc 32017769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 9481182 - 9481295
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||  |||||||||||| ||||||||    
T  9481182 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattct 9481280  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  9481281 tccaattttggtccc 9481295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 24731934 - 24731989
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24731934 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 24731989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 18500314 - 18500427
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  18500314 agggtaaatacctctttt-cgtccctataatattagcgaatttcggttttagtccctgtaagaaaaagatttagattttgtccctgtaatttcatattct 18500412  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  18500413 tccacttttggtccc 18500427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 18500708 - 18500655
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  18500708 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 10321746 - 10321787
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10321746 ttttcgtccctgtaatattagcgaattccggttttagtccct 10321787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Complemental strand, 26385649 - 26385598
Alignment:
Q  247 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  26385649 taaatacctctttt-cgtccctgtaatattagcgaattccgattttagtccct 26385598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 26385278 - 26385330
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||||||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  26385278 gggtaaatacctctttt-cgtctctgtaatattagcgaattctggttttagtcc 26385330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 2299692 - 2299641
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  2299692 agggtaaatatctctttt-cgttcctgtaatattagcgaattccggttttagt 2299641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 30617966 - 30618075
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattctt 342  Q
    |||||||||||||||||| ||||||||||||||||| |||||| | |||||||||   |         ||||||||| |||||||||||| |||||| ||    
T  30617966 agggtaaatacctctttt-cgtccctgtaatattagtgaattctgattttagtcc---tttaaaaaaatttagattttgtccctgtaatttcatattgtt 30618061  T
Q  343 ccatttttggtccc 356  Q
    ||| ||||||||||    
T  30618062 ccacttttggtccc 30618075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 9854250 - 9854152
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    |||| ||||||||||||||||||||||| ||||||||||  ||          ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  9854250 tttttgtccctgtaatattagcgaattctggttttagtctgtaaaaataataatttagattttgtccttgtaatttcatattcttccacttttggtccc 9854152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 24732316 - 24732274
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattcc 286  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  24732316 agggtaaatacctctttt-cgtccctgtaatattagcgaattcc 24732274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 293
Target Start/End: Original strand, 33714496 - 33714531
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggtttta 293  Q
    ||||||||||||||||||||||||||||||||||||    
T  33714496 ttttcgtccctgtaatattagcgaattccggtttta 33714531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 2299352 - 2299394
Alignment:
Q  257 tttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  2299352 tttttcgtctatgtaatattagcgaattccggttttagtccct 2299394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 3230091 - 3230030
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| ||||||| ||| | |||||||||  ||||||||||||||||||||||||    
T  3230091 gtccctgtaatttcatattcctcccacttttggtccttgtaatttcatattcctccactttt 3230030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 21069527 - 21069568
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| ||||||||||||| |||||||||||||||||||||||    
T  21069527 ttttagtccctgtaatatgagcgaattccggttttagtccct 21069568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 26385506 - 26385445
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| ||||||| ||| | |||||||||| ||||||||| ||||||||||||||    
T  26385506 gtccctgtaatttcatattcctcccagttttggtccctgtaatttcagattcctccactttt 26385445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 19284130 - 19284181
Alignment:
Q  245 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    |||||||||||||||| ||| | ||||||||||||||||||| ||||||||||    
T  19284130 ggtaaatacctctttt-cgttcatgtaatattagcgaattccagttttagtcc 19284181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 297
Target Start/End: Complemental strand, 34113631 - 34113591
Alignment:
Q  257 tttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  34113631 tttttggtccctgtaatattagcgaatttcggttttagtcc 34113591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 17142866 - 17142805
Alignment:
Q  321 gtccctgtaattccatattcttc-catttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| || |||| || || |||||||||| ||||||||| ||||||||||||||    
T  17142866 gtccctgtaatttcagattcctctcacttttggtccctgtaatttcagattcctccactttt 17142805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 19284197 - 19284242
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  19284197 tttagattttgtccctgtaatttcagattcttccacttttggtccc 19284242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Complemental strand, 24732248 - 24732203
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  24732248 tttagattttgtccatgtaatttcatattcttccacttttggtccc 24732203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 26385346 - 26385391
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| ||||||||||||  ||||||||||| ||||||||||    
T  26385346 tttagattttgtccctgtaattttatattcttccacttttggtccc 26385391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 295
Target Start/End: Original strand, 30458913 - 30458950
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  30458913 ttttcgtccctgtaatattagtgaatttcggttttagt 30458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 33714555 - 33714600
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  33714555 tttagattttgtccttgtaatttcatattcttccacttttggtccc 33714600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 15942503 - 15942459
Alignment:
Q  257 tttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    ||||| ||||||| ||||| ||||||||||| |||||||||||||    
T  15942503 tttttggtccctgcaatatgagcgaattccgattttagtccctat 15942459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 30618112 - 30618172
Alignment:
Q  321 gtccctgtaattccatattcttccatttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| || ||||| ||| ||||| || | ||||||||| ||||||||||||||    
T  30618112 gtccctgtaatttcagattctcccacttttgatcactgtaatttcaaattcctccactttt 30618172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 18462285 - 18462398
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |          ||||||||| |||||||||||| || |||||    
T  18462285 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattct 18462383  T
Q  342 tccatttttggtccc 356  Q
    |||||||||||||||    
T  18462384 tccatttttggtccc 18462398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 17606685 - 17606573
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattctt 342  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |         ||||||||| |||| ||||||| || ||||||    
T  17606685 agggttaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaagatttagattttgtccttgtaatttcagattctt 17606587  T
Q  343 ccatttttggtccc 356  Q
    ||| ||||||||||    
T  17606586 ccacttttggtccc 17606573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 39711451 - 39711337
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||  ||          ||||||||| ||||| |||||| |||||||    
T  39711451 agggtaaatacctctttt-cgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattc 39711353  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  39711352 ttccacttttggtccc 39711337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 33629069 - 33629014
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33629069 agggttaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccct 33629014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 18342395 - 18342341
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  18342395 gggtaaatacct-tttttcgtccctgtaatattagcgaatttcggttttagtccct 18342341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 33628689 - 33628743
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc 298  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  33628689 agggtaaatacctctttt-cgtccctgtaatattagcgaattctggttttagtccc 33628743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 4906961 - 4907075
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  4906961 agggtaaatacctctttt-cgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattc 4907059  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  4907060 ttccacttttggtccc 4907075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 29696564 - 29696616
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  29696564 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtc 29696616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 17606307 - 17606358
Alignment:
Q  247 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  17606307 taaatacctctttt-cgtccctgtaatattagcgaattccgattttagtccct 17606358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 20995697 - 20995752
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| | || |||||||||||||||||||||||||||||||||    
T  20995697 agggtaaatacctctttt-catctctgtaatattagcgaattccggttttagtccct 20995752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 24467628 - 24467741
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    ||||||||||| |||||| |||||||||||||||||||||||||  ||||||||||| |          ||||||||| |||||||||||| || |||||    
T  24467628 agggtaaatacatctttt-cgtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattct 24467726  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  24467727 tccacttttggtccc 24467741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 34749137 - 34749250
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    ||||||||||| |||||| | |||||||||||||||||||||| | |||||||||||||          ||||||||| ||||| |||||| ||||||||    
T  34749137 agggtaaatacatctttt-catccctgtaatattagcgaattctgattttagtccctataaaaaaaagatttagattttgtccccgtaatttcatattct 34749235  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  34749236 tccacttttggtccc 34749250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 39826424 - 39826370
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  39826424 gggtaaatacctctttt-cgtccatgtaatattagcgaatttcggttttagtccct 39826370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 39711074 - 39711185
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattctt 342  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| |          ||||||||| |||| ||||||| |||||||||    
T  39711074 gggtaaatacctctttt-cgtct-tgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccttgtaatttcatattctt 39711171  T
Q  343 ccatttttggtccc 356  Q
    ||| ||||||||||    
T  39711172 ccacttttggtccc 39711185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 354
Target Start/End: Original strand, 30299231 - 30299342
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc-ctatnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||||||||||| ||||||||||||||||||||| | || |||||||||  ||          ||||||||| |||||||||||| ||||||||    
T  30299231 agggtaaatacctctttt-cgtccctgtaatattagcgaacttcgattttagtcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 30299329  T
Q  342 tccatttttggtc 354  Q
    |||| ||||||||    
T  30299330 tccacttttggtc 30299342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 52058387 - 52058336
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    |||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  52058387 agggtaaatacctctttt-cgtccctgtaatattagcgaattttggttttagt 52058336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 8292804 - 8292858
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||    
T  8292804 gggtaaataactctttt-cgtccctgtactattagcgaatcccggttttagtccct 8292858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 8293187 - 8293072
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn---tttagatttagtccctgtaattccatatt 339  Q
    |||||||||||||||||| ||||||| |||||||| |||||||  |||||||||||| |            ||||||||| |||||||||||| ||||||    
T  8293187 agggtaaatacctctttt-cgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 8293089  T
Q  340 cttccatttttggtccc 356  Q
    |||||| ||||||||||    
T  8293088 cttccacttttggtccc 8293072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 17500781 - 17500820
Alignment:
Q  257 tttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  17500781 tttttggtccctgtaatattagcgaattccggttttagtc 17500820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 301
Target Start/End: Complemental strand, 17502094 - 17502051
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    |||| |||| ||||||||||||||||||||||||||||||||||    
T  17502094 ttttggtccttgtaatattagcgaattccggttttagtccctat 17502051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 301
Target Start/End: Original strand, 37236731 - 37236774
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  37236731 ttttggtccctgtaatatgagcgaattccggttttagtccctat 37236774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 39971024 - 39970970
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||| ||||| |||||||||| |||||| ||||||||||||||    
T  39971024 gggtaaatacctctttt-cgtccatgtaatattaacgaatttcggttttagtccct 39970970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 297
Target Start/End: Complemental strand, 42510380 - 42510341
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  42510380 ttttggtccctgtaatattagcgaattccggttttagtcc 42510341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 52058011 - 52058061
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    ||||||||||||||||| ||||| |||||||||| |||||||||||||||||    
T  52058011 gggtaaatacctctttt-cgtccttgtaatattaacgaattccggttttagt 52058061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 4907327 - 4907227
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtcc 355  Q
    ||||| ||||||||||||||||||||||| |||||||||||  ||          ||||||||| |||||||||||| || ||||||||| |||||||||    
T  4907327 ttttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattcttccacttttggtcc 4907228  T
Q  356 c 356  Q
    |    
T  4907227 c 4907227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 27039637 - 27039690
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||||| ||||    
T  27039637 agggttaatacctctttt-cgtccctgtaatatgagcgaattccggttttggtcc 27039690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 30252279 - 30252163
Alignment:
Q  243 agggtaaatacctctttt-tcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatatt 339  Q
    |||||||||||||||||  | |||||| |||||||||||||||| ||||||||||||  ||          ||||||||| ||||| |||||| ||||||    
T  30252279 agggtaaatacctctttccttgtccctataatattagcgaattctggttttagtccctgtaaaaataaagatttagattttgtccccgtaatttcatatt 30252180  T
Q  340 cttccatttttggtccc 356  Q
    |||||||||||| ||||    
T  30252179 cttccatttttgatccc 30252163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 356
Target Start/End: Original strand, 42510034 - 42510127
Alignment:
Q  264 tccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    |||||||||||||||||||||||||||||| ||||| |          ||||||||| |||||||||||| |||||||||||| |||| |||||    
T  42510034 tccctgtaatattagcgaattccggttttaatccctgtaaaaaaataatttagattttgtccctgtaatttcatattcttccacttttagtccc 42510127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 48072340 - 48072287
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    |||||||||||||||||| ||||  ||||||||||| ||||||||||||||||||    
T  48072340 agggtaaatacctctttt-cgtcattgtaatattagtgaattccggttttagtcc 48072287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 17606458 - 17606519
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| ||||||| ||| | |||||||||| ||||||||| ||||||||||||||    
T  17606458 gtccctgtaatttcatattcctcccacttttggtccctgtaatttcaaattcctccactttt 17606519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 29696936 - 29696884
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||||||||||| |||   |||||||||||||||||||||||||||||    
T  29696936 agggtaaatacctctttt-cgtttatgtaatattagcgaattccggttttagtc 29696884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 34749483 - 34749431
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||| |||||||||    
T  34749483 gggtaaatacctcttttt-gtctctgtaatattatcgaattccgattttagtcc 34749431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 295
Target Start/End: Complemental strand, 43539712 - 43539675
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    |||||||||||||||||||||| |||||||||||||||    
T  43539712 ttttcgtccctgtaatattagcaaattccggttttagt 43539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 13230110 - 13230059
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    ||||||||||||||||| |||| ||| |||||||||||||| |||||||||||    
T  13230110 gggtaaatacctctttt-cgtctctgaaatattagcgaatttcggttttagtc 13230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 18462663 - 18462612
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    |||| ||||||||||||| | |||||||||||||||| |||||||||||||||    
T  18462663 agggcaaatacctcttttcc-tccctgtaatattagcaaattccggttttagt 18462612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 39826049 - 39826104
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||| | ||||||||||||||| || |||||||||||    
T  39826049 agggtaaatacctctttt-cgtccatataatattagcgaatttcgattttagtccct 39826104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 20996046 - 20995933
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    ||||| ||||||||||||| ||||||||||||||||||||||   |||||||||| | |          ||||||||| ||| |||||||| ||||||||    
T  20996046 agggttaatacctcttttt-gtccctgtaatattagcgaattttagttttagtccatgtaaaaaaaagatttagattttgtctctgtaatttcatattct 20995948  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  20995947 tccacttttggtccc 20995933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 24468002 - 24467892
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||||||||||    || ||||||||||| |||||||||||||||||||  ||          ||||||||| |||||||||||| || |||||    
T  24468002 gggtaaatacctctttt----ccatgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 24467907  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  24467906 tccacttttggtccc 24467892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 17606376 - 17606421
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| || ||||||||| |||||||||||| ||||||||||    
T  17606376 tttagattttgttcctgtaatttcatattcttccacttttggtccc 17606421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 39826356 - 39826312
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtcc 355  Q
    ||||||||| |||||||||||| || ||||||||| |||||||||    
T  39826356 tttagattttgtccctgtaatttcagattcttccacttttggtcc 39826312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 43400752 - 43400807
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||| |||||||||||| |||| || |||||| |||||||||||||||| ||||||    
T  43400752 agggttaatacctctttt-cgtctctataatatgagcgaattccggttttggtccct 43400807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 6e-22; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 10108369 - 10108483
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  10108369 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 10108467  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  10108468 ttccacttttggtccc 10108483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 14820295 - 14820407
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattctt 342  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |          ||||||||| |||||||||||| |||||||||    
T  14820295 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattctt 14820393  T
Q  343 ccatttttggtccc 356  Q
    ||| ||||||||||    
T  14820394 ccacttttggtccc 14820407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 5554868 - 5554923
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5554868 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 5554923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 21147927 - 21147990
Alignment:
Q  235 ttattgagagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21147927 ttattgaaagggttaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccct 21147990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 43851665 - 43851719
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  43851665 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 43851719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 10108749 - 10108635
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    ||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  10108749 agggttaatacctctttt-cgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 10108651  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  10108650 ttccacttttggtccc 10108635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 14820673 - 14820559
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  14820673 agggttaatacctctttta-gtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 14820575  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  14820574 ttccacttttggtccc 14820559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 18044205 - 18044153
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18044205 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtcc 18044153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 10171522 - 10171467
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  10171522 agggtaaataccgctttt-cgtccctgtaatattagcgaattccggttttagtccct 10171467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 7689902 - 7689849
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  7689902 agggtaaatacctctttt-cgtccctgtaatattagcgaattccgattttagtcc 7689849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 21148315 - 21148260
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||    
T  21148315 agggtaaatacctctttt-cgtctctgtaatattagtgaattccggttttagtccct 21148260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 30789886 - 30789831
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  30789886 agggtaaatacctctttt-cgtccctgtaatattagtaaattccggttttagtccct 30789831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 5555234 - 5555134
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtcc 355  Q
    ||||||||||||||||||||||||||| ||||||||||| |  ||          ||||||||| |||||||||||| |||||||||||| |||||||||    
T  5555234 ttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtcc 5555135  T
Q  356 c 356  Q
    |    
T  5555134 c 5555134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 7689523 - 7689576
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||    
T  7689523 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggctttagtcc 7689576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 301
Target Start/End: Complemental strand, 20877124 - 20877067
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    ||||| ||||||||||||  ||||||||||||| |||||||||||||||||||||||||    
T  20877124 agggttaatacctcttttg-gtccctgtaatatgagcgaattccggttttagtccctat 20877067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 30789521 - 30789562
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  30789521 ttttcgtccctgtaatattagcgaattccgattttagtccct 30789562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 42112998 - 42113039
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  42112998 ttttcgtccctgtaatattagcgaattccgattttagtccct 42113039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 42606132 - 42606080
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  42606132 agggtaaatatctcttttt-gtccctgtaatattagcgaattctggttttagtc 42606080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 43481694 - 43481642
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||| ||||||| |||| ||||||||||||||||||||||||||||||    
T  43481694 agggtaaatatctctttt-cgtcactgtaatattagcgaattccggttttagtc 43481642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 17622889 - 17622944
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||||    
T  17622889 agggtaaatacctctttt-cgtccttgtaatattagcgaatttcagttttagtccct 17622944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 26136684 - 26136739
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||| ||||||||||||    
T  26136684 agggtgaatacctctttt-cgttcctgtaatattagcgaattccagttttagtccct 26136739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 35367409 - 35367464
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||||||| |||||    
T  35367409 agggtaaatacctcttttg-gtccctgcaatattagcgaattccggttttaatccct 35367464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 26137063 - 26136950
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcccta-tnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||||| ||||| ||||||||||||||||| ||||| | ||||||||||||| |          |||||||| |||||||||||| || |||||    
T  26137063 agggtaaataccactttt-cgtccctgtaatattagtgaatttcagttttagtccctagtaaaaaaaaaattagattttgtccctgtaatttcagattct 26136965  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  26136964 tccacttttggtccc 26136950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 38726686 - 38726743
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    ||||| |||||| |||||| ||||||||||||| ||| |||||||||||||||||||||    
T  38726686 agggttaatacc-ctttttggtccctgtaatatgagcaaattccggttttagtccctat 38726743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 42113360 - 42113309
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    ||||||||||| |||||| |||||||||||||||| |||||| ||||||||||    
T  42113360 agggtaaatacatctttt-cgtccctgtaatattaacgaatttcggttttagt 42113309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 22494454 - 22494497
Alignment:
Q  312 ttagatttagtccctgtaattccatattcttccatttttggtcc 355  Q
    |||||||| || ||||||||| ||||||||||||||||||||||    
T  22494454 ttagattttgttcctgtaatttcatattcttccatttttggtcc 22494497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 301
Target Start/End: Complemental strand, 21144865 - 21144827
Alignment:
Q  263 gtccctgtaatattagcgaattccggttttagtccctat 301  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  21144865 gtccctgtaatattaacgaattccgattttagtccctat 21144827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 381
Target Start/End: Original strand, 22494561 - 22494595
Alignment:
Q  347 ttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||||||||||| ||||||||||||||    
T  22494561 ttttggtcccagtaatttcagattcctccactttt 22494595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 43851865 - 43851831
Alignment:
Q  347 ttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||| ||||||||||||||||||||||||    
T  43851865 ttttggtccctgtaatttcatattcctccactttt 43851831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 2583470 - 2583531
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||    
T  2583470 gtccctgtaatttcagattcctcctacttttggtccctgtaatttcaaattcctccactttt 2583531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 14767735 - 14767674
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||    
T  14767735 gtccctgtaatttcagattcctcccacttttggtccctgtaatttcaaattcctccactttt 14767674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 17623115 - 17623054
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||    
T  17623115 gtccctgtaatttcaaattcctcccacttttggtccctgtaatttcagattcctccactttt 17623054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 21148005 - 21148050
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  21148005 tttagattttgtccctgtaatttcagattcttccacttttggtccc 21148050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 40486642 - 40486683
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| ||||||||||||||| ||||||||| |||||||||||    
T  40486642 ttttggtccctgtaatattaacgaattccgattttagtccct 40486683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 40487779 - 40487738
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| |||| ||||||||||||||||||| ||||||||||||    
T  40487779 ttttggtccttgtaatattagcgaattccagttttagtccct 40487738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 42113212 - 42113151
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| ||||||| ||| | ||||||||||  |||||||||||| ||||||||||    
T  42113212 gtccctgtaatttcatattcctcccacttttggtccctataatttcatattactccactttt 42113151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 1949651 - 1949702
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    ||||| ||||||||||||  ||||||||||||| | |||||||||||||||||    
T  1949651 agggttaatacctcttttg-gtccctgtaatatgatcgaattccggttttagt 1949702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 17623261 - 17623214
Alignment:
Q  247 taaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    |||||||||||||| | |||||||||||||||| ||||| |||||||||    
T  17623261 taaatacctctttt-catccctgtaatattagccaattctggttttagt 17623214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 355
Target Start/End: Complemental strand, 30789817 - 30789773
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtcc 355  Q
    ||||||||| |||||||||||| || ||||||||| |||||||||    
T  30789817 tttagattttgtccctgtaatttcagattcttccacttttggtcc 30789773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 42605822 - 42605866
Alignment:
Q  312 ttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||  ||||||||||| |||||||||||| ||||||||||    
T  42605822 ttagattttatccctgtaatttcatattcttccacttttggtccc 42605866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 6e-22; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 9266974 - 9267088
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  9266974 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattc 9267072  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  9267073 ttccacttttggtccc 9267088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 30500042 - 30500154
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattctt 342  Q
    ||||| |||||||||||| | ||||||||||||||||||||| |||||||||||||| |         ||||||||| |||||||||||| |||||||||    
T  30500042 agggttaatacctctttt-catccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatttagattttgtccctgtaatttcatattctt 30500140  T
Q  343 ccatttttggtccc 356  Q
    ||| ||||||||||    
T  30500141 ccacttttggtccc 30500154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 14171965 - 14171910
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14171965 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 14171910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 14262415 - 14262360
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14262415 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 14262360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 30500419 - 30500306
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |          ||||||||| |||||||||||| |||||| |    
T  30500419 agggtaaatacctctttt-cgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaatttagattttgtccctgtaatttcatattgt 30500321  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  30500320 tccacttttggtccc 30500306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 241 - 299
Target Start/End: Complemental strand, 27946246 - 27946189
Alignment:
Q  241 agagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  27946246 agagggtaaatacctctttt-cgtcccagtaatattagcgaattccggttttagtccct 27946189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 16721990 - 16722042
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16721990 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtc 16722042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 16722370 - 16722256
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    |||||||||||||||||| ||||||||||||||||||||||| | |||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  16722370 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattc 16722272  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  16722271 ttccacttttggtccc 16722256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 35995677 - 35995791
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  35995677 agggtaaatacctctttt-cgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattc 35995775  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  35995776 ttccacttttggtccc 35995791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 5800605 - 5800718
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    ||||||||||||||||| |||||||||||||||| |||||| |||||||||||||  ||          ||||||||  |||||||||||| ||||||||    
T  5800605 gggtaaatacctctttt-cgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattct 5800703  T
Q  342 tccatttttggtccc 356  Q
    |||||||||||||||    
T  5800704 tccatttttggtccc 5800718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 19112763 - 19112818
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  19112763 agggtaaatacctctttt-cgtccatgtaatattagcgaattccggttttagtccct 19112818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 45969914 - 45969969
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  45969914 agggtaaatacctctttt-cgtccctgtaatattagtgaattccggttttagtccct 45969969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 14162248 - 14162194
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14162248 gggttaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccct 14162194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 19720333 - 19720387
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  19720333 gggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttagtccct 19720387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 49986526 - 49986578
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  49986526 agggtaaatacctctttt-cgtccctgtaatattagagaattccggttttagtc 49986578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 9267353 - 9267298
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  9267353 agggtaaatacctctttt-cgtccttgtaatattagcgaattccgattttagtccct 9267298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 11003731 - 11003786
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||    
T  11003731 agggtaaatacctcttttt-gtccttgtaatattaccgaattccggttttagtccct 11003786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 14161871 - 14161984
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat--nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| |||||||| |||||           ||||||||  |||||||||||| ||||||||    
T  14161871 gggtaaatatctctttt-cgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattct 14161969  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  14161970 tccacttttggtccc 14161984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 35996054 - 35995999
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  35996054 agggtaaatacatctttt-cgtccctgtaatattagcgaattccgattttagtccct 35995999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 45970295 - 45970240
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||    
T  45970295 agggtaaatacctctttt-cgtccctgtaatattagtgaatttcggttttagtccct 45970240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 297
Target Start/End: Original strand, 14262049 - 14262088
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14262049 ttttcgtccctgtaatattagcgaattccggttttagtcc 14262088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 19113143 - 19113089
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  19113143 gggtaaatacctctttt-cgtccctataatattaacgaattccggttttagtccct 19113089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 356
Target Start/End: Complemental strand, 45003859 - 45003761
Alignment:
Q  259 tttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn-tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    |||||||||||||||||||||||||| |||||||||| ||| |          |||||||||||||||| ||||| |||||||||||| ||||||||||    
T  45003859 tttcgtccctgtaatattagcgaatttcggttttagttcctgtaaaaaaaagatttagatttagtccctataatttcatattcttccacttttggtccc 45003761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 20853694 - 20853743
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 293  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  20853694 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggtttta 20853743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 27946114 - 27946163
Alignment:
Q  249 aatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  27946114 aatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccct 27946163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 21633275 - 21633161
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat--nnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    ||||||||||||| || | ||||||||||||||||||||||| | ||||||||||||||           ||||||||| |||||||||||| || ||||    
T  21633275 agggtaaatacctattct-cgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattc 21633177  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  21633176 ttccacttttggtccc 21633161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 43572388 - 43572502
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| |||||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  43572388 agggtaaatacatctttt-cgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagattc 43572486  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  43572487 ttccacttttggtccc 43572502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 5800982 - 5800870
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| |||||||||  ||          ||||||||| |||| ||||||| ||||||||    
T  5800982 gggttaatacctctttt-cgtccctgtaatattagcgaattccgg-tttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattct 5800885  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  5800884 tccacttttggtccc 5800870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 24490298 - 24490243
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||    
T  24490298 agggtaaatatct-tttttcctccctgtaatattagtgaattccggttttagtccct 24490243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 33372405 - 33372456
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  33372405 agggtaaatatctctttt-cgtccctgtaatattagcgaattctggttttagt 33372456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 298
Target Start/End: Original strand, 35740830 - 35740870
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccc 298  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  35740830 ttttggtccctgtaatattagcgaattccggttttagtccc 35740870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 49986907 - 49986856
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    |||||||||||||||||| |||||| |||||||||||||||| ||||||||||    
T  49986907 agggtaaatacctctttt-cgtcccagtaatattagcgaatttcggttttagt 49986856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 3426027 - 3425973
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc 298  Q
    ||||| ||||||||||||  | ||||||||||||||||||||||||||||||||||    
T  3426027 agggttaatacctcttttg-gcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 20854074 - 20853961
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc-ctatnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||| ||||||| ||||| ||||||||||||||||| ||||||||||||  ||          ||||||||| |||||||||||| || |||||    
T  20854074 agggtaaatatctctttt-cgtccatgtaatattagcgaatttcggttttagtcctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 20853976  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  20853975 tccacttttggtccc 20853961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 14171586 - 14171635
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 293  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| |||||    
T  14171586 agggtaaataccactttt-cgtccctgtaatattagcgaattccgatttta 14171635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 21632900 - 21632940
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaatt 284  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  21632900 agggtaaatacctctttt-cgtccctgtaatattagcgaatt 21632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 35741949 - 35741908
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| |||||||||||||||||||||||| ||||||||||||    
T  35741949 ttttggtccctgtaatattagcgaattccagttttagtccct 35741908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 36991024 - 36990983
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  36991024 ttttggtccctgtaatattagcgaatttcggttttagtccct 36990983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 37016464 - 37016423
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  37016464 ttttggtccctgtaatattagcgaatttcggttttagtccct 37016423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 45003496 - 45003552
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    ||||||||| ||||||| |||||| ||||||||||| ||||||||||| |||||||||    
T  45003496 gggtaaatatctctttt-cgtccccgtaatattagcaaattccggtttcagtccctat 45003552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 3424773 - 3424828
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||| ||||||||||||  ||||||||||||||||||| |||||||||| ||||||    
T  3424773 agggttaatacctcttttg-gtccctgtaatattagcgatttccggttttggtccct 3424828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 295
Target Start/End: Complemental strand, 17649384 - 17649337
Alignment:
Q  247 taaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    |||||||||||||| || |||||||||| ||||||||||||||||||||    
T  17649384 taaatacctctttt-cgaccctgtaatactagcgaattccggttttagt 17649337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 33372783 - 33372732
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    |||||||||||||||||| |||||| |||||||||||||||| || |||||||    
T  33372783 agggtaaatacctctttt-cgtccccgtaatattagcgaatttcgattttagt 33372732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 297
Target Start/End: Original strand, 38283563 - 38283602
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  38283563 ttttcatccctgtaatattaacgaattccggttttagtcc 38283602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 356
Target Start/End: Complemental strand, 52553065 - 52552953
Alignment:
Q  245 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattctt 342  Q
    ||||||||| |||||| ||||| ||||||||||||||||||  |||||||||||  ||          ||||||||| ||| |||||||| |||||||||    
T  52553065 ggtaaatacatctttt-cgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattctt 52552967  T
Q  343 ccatttttggtccc 356  Q
    ||| ||||||||||    
T  52552966 ccacttttggtccc 52552953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 17465746 - 17465697
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 293  Q
    |||||||||||||||||| ||||| ||||||||||||||||| | ||||||    
T  17465746 agggtaaatacctctttt-cgtccttgtaatattagcgaatttcagtttta 17465697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 11003882 - 11003943
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||    
T  11003882 gtccctgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccactttt 11003943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 14262104 - 14262149
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  14262104 tttagattttgtccctgtaatttcagattcttccacttttggtccc 14262149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 15328610 - 15328671
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||    
T  15328610 gtccctgtaatttcagattcctcccacttttggtccctgtaatttcaaattcctccactttt 15328671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 19112833 - 19112878
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| ||||||| |||| |||||||||||| ||||||||||    
T  19112833 tttagattttgtccctggaatttcatattcttccacttttggtccc 19112878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 20853764 - 20853809
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||||| ||||| |||||||||||| ||||||||||    
T  20853764 tttagattttgtccctataatttcatattcttccacttttggtccc 20853809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 43572541 - 43572602
Alignment:
Q  321 gtccctgtaattccatatt-cttccatttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| |||||| || ||| |||||||||| ||||||||| ||| ||||||||||    
T  43572541 gtccctgtaatttcatattcctcccacttttggtccctgtaatttcaaattactccactttt 43572602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 17465366 - 17465417
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    ||||||||||||||||||| |||| | |||||||||||||||| | |||||||    
T  17465366 agggtaaatacctcttttt-gtccttttaatattagcgaattctgattttagt 17465417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 43572769 - 43572718
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    |||||||||||||||||| | |||||||||||||  | |||||||||||||||    
T  43572769 agggtaaatacctctttt-catccctgtaatattgacaaattccggttttagt 43572718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 381
Target Start/End: Complemental strand, 47575499 - 47575439
Alignment:
Q  322 tccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    ||||||||||| || |||| ||| |||||| ||||| ||||||||| ||||||||||||||    
T  47575499 tccctgtaatttcaaattcctcccattttttgtccctgtaatttcaaattcctccactttt 47575439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 2e-21; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 20419536 - 20419649
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| ||||||||    
T  20419536 gggtaaatacctctttt-cgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 20419634  T
Q  342 tccatttttggtccc 356  Q
    |||||||||||||||    
T  20419635 tccatttttggtccc 20419649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 23705039 - 23704926
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  23705039 agggtaaatacctctttt-cgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 23704941  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  23704940 tccacttttggtccc 23704926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 355
Target Start/End: Complemental strand, 20963872 - 20963760
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |          |||||||||||||||||||||| || |||||    
T  20963872 agggtaaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccctgtaaaaataaaatttagatttagtccctgtaatttcagattct 20963774  T
Q  342 tccatttttggtcc 355  Q
    | || |||||||||    
T  20963773 ttcacttttggtcc 20963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 28218542 - 28218428
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  28218542 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 28218444  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  28218443 ttccacttttggtccc 28218428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 41600337 - 41600223
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  41600337 agggtaaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 41600239  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  41600238 ttccacttttggtccc 41600223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 28218177 - 28218232
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28218177 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 28218232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 12006540 - 12006595
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  12006540 agggtaaatacctctttt-cgtccctgtaatattagcgaattccgattttagtccct 12006595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 20419915 - 20419861
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  20419915 gggtaaatacctcttttt-gtccctgtaatattaacgaattccggttttagtccct 20419861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 293
Target Start/End: Original strand, 23704662 - 23704710
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggtttta 293  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23704662 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggtttta 23704710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 38880099 - 38879989
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttc 343  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||  ||          ||||||||| |||||||||||| || |||||||    
T  38880099 gggtaaatacctctttt-cgtccctgtaatattagcaaattccggttttagtcttta-aaaaaaaaatttagattttgtccctgtaatttcagattcttc 38880002  T
Q  344 catttttggtccc 356  Q
    || ||||||||||    
T  38880001 cacttttggtccc 38879989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 20458691 - 20458746
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||    
T  20458691 agggtaaatacat-tttttcgtccctgtaatattaacgaattccggttttagtccct 20458746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 296
Target Start/End: Original strand, 44816832 - 44816884
Alignment:
Q  245 ggtaaatacctctttt-tcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  44816832 ggtaaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtc 44816884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 48672658 - 48672603
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||    
T  48672658 agggtaaatacctctttt-cgtctctgtaatattagcgaatttcggttttagtccct 48672603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 6465855 - 6465909
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||| || |||||||||| ||||||||||||||||||||||||||||||||    
T  6465855 gggtaaatatct-tttttcgtccatgtaatattagcgaattccggttttagtccct 6465909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 357
Target Start/End: Original strand, 16995200 - 16995313
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattctt 342  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||||||| ||| |          ||||||||| |||||||||||| || ||||||    
T  16995200 gggtaaatacctctttt-cgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaatatttagattttgtccctgtaatttcagattctt 16995298  T
Q  343 ccatttttggtccca 357  Q
    ||| |||||||||||    
T  16995299 ccacttttggtccca 16995313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 23383499 - 23383613
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat---nnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    |||||||||| |||||| |||| |||||||||||| ||||||||||||||||||||||            ||||||||| |||||| ||||| |||||||    
T  23383499 gggtaaatacttctttt-cgtctctgtaatattagtgaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcatattc 23383597  T
Q  341 ttccatttttggtccc 356  Q
    |||||||||| |||||    
T  23383598 ttccattttttgtccc 23383613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 38879723 - 38879837
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct---atnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    ||||||||||||||||| |||||||||||||||||||||||||  ||||||| |||   |          ||||||||| |||||||||||| |||||||    
T  38879723 gggtaaatacctctttt-cgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattc 38879821  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  38879822 ttccacttttggtccc 38879837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 12006919 - 12006805
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    |||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  12006919 agggtaaatacctctttt-cgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattc 12006821  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  12006820 ttccacttttggtccc 12006805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 23383879 - 23383765
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct--atnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    |||||||||||||||||| ||||||||||||||||| |||||| | |||||||||||  |          ||||||||| |||||||||||| |||||||    
T  23383879 agggtaaatacctctttt-cgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattc 23383781  T
Q  341 ttccatttttggtccc 356  Q
    |||||  |||||||||    
T  23383780 ttccacctttggtccc 23383765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 24195250 - 24195198
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||||||||||||||| |||||||||||||||||||||||| | |||||||||    
T  24195250 gggtaaatacctctttt-cgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 41599958 - 41600010
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||||||||||||||| | ||||||||||||||||||||| ||||||||||||    
T  41599958 gggtaaatacctctttt-catccctgtaatattagcgaatttcggttttagtcc 41600010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 48672276 - 48672328
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  48672276 agggtaaatacctctttt-cgtccctgtaatattagtgaatttcggttttagtc 48672328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 10409752 - 10409697
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| | ||| |||||||||||||||||||| |||||||||||    
T  10409752 agggtaaatacctctttt-catccatgtaatattagcgaattccgattttagtccct 10409697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 14647029 - 14646974
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||| |||||| |||||| ||||||||||||| |||||||||||||||||||||||    
T  14647029 agggttaatacc-ctttttagtccctgtaatatgagcgaattccggttttagtccct 14646974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 291
Target Start/End: Complemental strand, 20459069 - 20459022
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttt 291  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  20459069 agggtaaatacctctttt-cgtccctgtaatattagggaattccggttt 20459022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 25772363 - 25772414
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    |||||||||||||||||| ||||||||||||||||||||||| || |||||||    
T  25772363 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcgattttagt 25772414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 296
Target Start/End: Complemental strand, 7658342 - 7658292
Alignment:
Q  245 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  7658342 ggtaaatacctctttt-cgtccctgtaatattaacgaatttcggttttagtc 7658292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 33162915 - 33162862
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    |||||||||||||||||| |||| |||||||||||||||||| | ||||||||||    
T  33162915 agggtaaatacctctttt-cgtctctgtaatattagcgaatttctgttttagtcc 33162862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 31852209 - 31852157
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    ||||| |||||||||||| |||||||||||||||| |||||| |||||||||||    
T  31852209 agggttaatacctctttt-cgtccctgtaatattaacgaatttcggttttagtc 31852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 7657972 - 7658023
Alignment:
Q  247 taaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||||| |||||    
T  7657972 taaatacctctttt-cgtccatgtaatattagcgaatttcggttttaatccct 7658023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 25772710 - 25772655
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||| ||||||| ||||||| ||||||||| ||||||| ||||||||||||    
T  25772710 agggtaaatatctctttt-cgtccctataatattagtgaattccagttttagtccct 25772655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 311 - 381
Target Start/End: Original strand, 24194931 - 24195002
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttc-catttttggtcccagtaatttcatattcctccactttt 381  Q
    ||||||||| |||||||||||| || |||| || || ||||||||||  |||||||| ||||||||||||||    
T  24194931 tttagattttgtccctgtaatttcagattcctctcacttttggtccctataatttcagattcctccactttt 24195002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 296
Target Start/End: Complemental strand, 1250571 - 1250533
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  1250571 ttttcgtccttgtaatattagcgaattccagttttagtc 1250533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 20419737 - 20419703
Alignment:
Q  347 ttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||| ||||||||||||||||||||||||    
T  20419737 ttttggtccctgtaatttcatattcctccactttt 20419703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 354
Target Start/End: Complemental strand, 31851548 - 31851506
Alignment:
Q  312 ttagatttagtccctgtaattccatattcttccatttttggtc 354  Q
    |||||||| |||||||||||| |||||||||||| ||||||||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtc 31851506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 1250434 - 1250373
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| || |||| ||| |||||||||| | |||||| |||||||||||||||||    
T  1250434 gtccctgtaatttcaaattcctcctatttttggtcactgtaattccatattcctccactttt 1250373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Complemental strand, 1250516 - 1250471
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||||| ||||| |||||||||||| ||||||||||    
T  1250516 tttagattttgtccctttaatttcatattcttccacttttggtccc 1250471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 6466184 - 6466132
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||| |||||||| ||  |||||||||||||||||| |||||||||||    
T  6466184 agggtaaatatctcttttt-gtatctgtaatattagcgaatttcggttttagtc 6466132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 20963507 - 20963548
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||||||| ||||||  ||||||||||||    
T  20963507 ttttcgtccctgtaatattagtgaattctagttttagtccct 20963548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 20963563 - 20963608
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||    
T  20963563 tttagatttagtccctgtaattttagattcttccacttttggtccc 20963608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 20963723 - 20963662
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| ||||||| ||| | |||||||||  |||||||||||||| |||||||||    
T  20963723 gtccctgtaatttcatattcctcccacttttggtccttgtaatttcatattcttccactttt 20963662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 23258289 - 23258248
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| ||| |||||||||||||||||||||||||| ||||||    
T  23258289 ttttggtctctgtaatattagcgaattccggttttggtccct 23258248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Complemental strand, 24195106 - 24195061
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  24195106 tttagattttgtccttgtaatttcatattcttccacttttggtccc 24195061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Original strand, 28218247 - 28218292
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  28218247 tttagattttgtccctgtaatttcagattcttccacttttggtccc 28218292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 14630335 - 14630390
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||| |||||| |||||| || | |||||||| |||||||||||||||||||||||    
T  14630335 agggttaatacc-ctttttagttcttgtaatatgagcgaattccggttttagtccct 14630390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 381
Target Start/End: Original strand, 23704812 - 23704872
Alignment:
Q  322 tccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    ||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||    
T  23704812 tccctgtaatttcagattcctcccacttttggtccctgtaatttcagattcctccactttt 23704872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 299
Target Start/End: Original strand, 33131651 - 33131687
Alignment:
Q  263 gtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  33131651 gtccctgtaatatgagcgatttccggttttagtccct 33131687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 48648263 - 48648314
Alignment:
Q  245 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    |||||||| ||||||| |||||||||||||| |||||||| || |||||||||    
T  48648263 ggtaaatatctctttt-cgtccctgtaatatcagcgaatttcgattttagtcc 48648314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 353
Target Start/End: Original strand, 14143901 - 14144011
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  14143901 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 14143999  T
Q  342 tccatttttggt 353  Q
    |||| |||||||    
T  14144000 tccacttttggt 14144011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 14411696 - 14411751
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14411696 agggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccct 14411751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 17762282 - 17762337
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17762282 agggtaaatacctcttttt-gtccctgtaatattagcgaattccggttttagtccct 17762337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 23979279 - 23979166
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| || |||||    
T  23979279 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattct 23979181  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  23979180 tccacttttggtccc 23979166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 24837168 - 24837282
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||  ||          ||||||||| |||| ||||||| |||||||    
T  24837168 agggtaaatacctctttt-cgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattc 24837266  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  24837267 ttccacttttggtccc 24837282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 993751 - 993860
Alignment:
Q  245 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttcc 344  Q
    ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| |          ||||||||||||| ||||||| |||||||||||    
T  993751 ggtaaatacttctttt-cgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaaa-ttagatttagtccttgtaatttcatattcttcc 993848  T
Q  345 atttttggtccc 356  Q
    | ||||||||||    
T  993849 acttttggtccc 993860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 41001729 - 41001678
Alignment:
Q  245 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41001729 ggtaaatacct-tttttcgtccctgtaatattagcgaattccggttttagtcc 41001678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 24837547 - 24837493
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  24837547 gggtaaatacctctttt-cgtccctgtaatattagcgaattccagttttagtccct 24837493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 24651078 - 24651025
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  24651078 agggtaaatacctctttt-cgtctctgtaatattagcgaattccggttttagtcc 24651025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 7126296 - 7126244
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  7126296 agggtaaatacctctttt-catccctgtaatattagcgaattccggttttagtc 7126244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 24074302 - 24074416
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    |||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||  ||          ||||||||| ||| |||||||| |||||||    
T  24074302 agggtaaatacctctttt-cgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattc 24074400  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  24074401 ttccacttttggtccc 24074416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 259 - 355
Target Start/End: Original strand, 41001370 - 41001465
Alignment:
Q  259 tttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtcc 355  Q
    |||||||||||||||||||||||||| |||||||||||||| |          |||||||| |||||||||||| |||||||||||| |||||||||    
T  41001370 tttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaa-ttagattttgtccctgtaatttcatattcttccacttttggtcc 41001465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 6817122 - 6817177
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  6817122 agggtaaatacctctttt-cgtccttgtaatattagtgaattccggttttagtccct 6817177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 17762661 - 17762606
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||    
T  17762661 agggtaaatacctctttt-cgtccctgtagtattagcgaattctggttttagtccct 17762606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 31799640 - 31799753
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||  ||          ||||||||| |||||||||||| || |||||    
T  31799640 gggtaaatacctctttt-cgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattct 31799738  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  31799739 tccacttttggtccc 31799753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 18336833 - 18336780
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  18336833 gggtaaatacctctttt-cgtccctgtaa-attagcgaattccggttttagtccct 18336780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 356
Target Start/End: Complemental strand, 27159327 - 27159222
Alignment:
Q  249 aatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccattt 348  Q
    |||||||||||| ||||| ||||||||||||||||| |||||||||||| | |         ||||||||| ||||||||||||  ||||||||||||||    
T  27159327 aatacctctttt-cgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaaa-tttagattttgtccctgtaattttatattcttccattt 27159230  T
Q  349 ttggtccc 356  Q
    ||||||||    
T  27159229 ttggtccc 27159222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 297
Target Start/End: Complemental strand, 31800018 - 31799965
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  31800018 agggaaaatacctctttt-cgtccctataatattagcgaattccggttttagtcc 31799965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 4918988 - 4919103
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn---tttagatttagtccctgtaattccatatt 339  Q
    |||||||||||||||||| | || |||||||||||||||||| |||||||||| ||| |            ||||||||| |||||||||||| ||||||    
T  4918988 agggtaaatacctctttt-catctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatatt 4919086  T
Q  340 cttccatttttggtccc 356  Q
    |||||| ||||||||||    
T  4919087 cttccacttttggtccc 4919103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 18336467 - 18336521
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||| ||||||| ||||||| |||||||||||||||||| |||||||||||    
T  18336467 gggtaaatatctctttt-cgtccctataatattagcgaattccgattttagtccct 18336521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 297
Target Start/End: Complemental strand, 29445170 - 29445131
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  29445170 ttttcgtccctgtaatattagcgaattccagttttagtcc 29445131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 4919366 - 4919317
Alignment:
Q  245 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    |||||||||||||||| |||| ||| |||||||||||||||||||||||||    
T  4919366 ggtaaatacctctttt-cgtctctggaatattagcgaattccggttttagt 4919317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 299
Target Start/End: Original strand, 7125923 - 7125972
Alignment:
Q  249 aatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||| ||| |||||||||||||||||||||| |||||||||||    
T  7125923 aatacctctttt-cgttcctgtaatattagcgaattccgattttagtccct 7125972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 7126145 - 7126084
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| ||||||| ||| | |||||||||| ||||||||| ||||||||||||||    
T  7126145 gtccctgtaatttcatattcctcccacttttggtccctgtaatttcaaattcctccactttt 7126084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 311 - 356
Target Start/End: Complemental strand, 7126227 - 7126182
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||||    
T  7126227 tttagattttgtccctgtaatttcatattcttccacttttggtccc 7126182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 14144280 - 14144166
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    ||||| |||||||||||| |||| ||||||||||| ||||||||| ||||||||||  ||          ||||||||| |||||||||||| || ||||    
T  14144280 agggttaatacctctttt-cgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattc 14144182  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||||||||    
T  14144181 ttccacttttggtccc 14144166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 353
Target Start/End: Original strand, 24650704 - 24650810
Alignment:
Q  246 gtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttcca 345  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||||| ||  | |         ||||||||| || ||||||||| ||||||||||||    
T  24650704 gtaaatacctctttt-cgtccctgtaatattaacgaatttcggttttaatctatgtaaaaaaagatttagattttgttcctgtaatttcatattcttcca 24650802  T
Q  346 tttttggt 353  Q
     |||||||    
T  24650803 cttttggt 24650810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 30512287 - 30512342
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||| ||||||| ||||||||||||||||| |||||  |||||||||||||    
T  30512287 agggtaaatatctctttt-cgtccctgtaatattagtgaattttggttttagtccct 30512342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 30552627 - 30552682
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||| ||||||| ||||||||||||||||| |||||  |||||||||||||    
T  30552627 agggtaaatatctctttt-cgtccctgtaatattagtgaattttggttttagtccct 30552682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 311 - 354
Target Start/End: Complemental strand, 6817431 - 6817388
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtc 354  Q
    ||||||||| |||||||||||| |||||||||||| ||||||||    
T  6817431 tttagattttgtccctgtaatttcatattcttccacttttggtc 6817388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 994123 - 994011
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||||| ||||  ||||| |||||| ||||||||| |||||||||||||  ||          ||||||||| |||||||||||| || |||||    
T  994123 gggtaaatacctttttt--gtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattct 994026  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  994025 tccacttttggtccc 994011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Original strand, 14144051 - 14144112
Alignment:
Q  321 gtccctgtaattccatattc-ttccatttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| || |||| ||||| |||||||||  ||||||||| ||||||||||||||    
T  14144051 gtccctgtaatttcagattccttccacttttggtccatgtaatttcaaattcctccactttt 14144112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 22571090 - 22571131
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| |||| |||||||||||||||||||| |||||||||||    
T  22571090 tttttgtccttgtaatattagcgaattccgattttagtccct 22571131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Complemental strand, 24074612 - 24074567
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||| ||||||| |||||||||||| ||||||||||    
T  24074612 tttagattttgtccttgtaatttcatattcttccacttttggtccc 24074567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 27158990 - 27159042
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    ||||| |||||||||||| ||||| ||||||||||||||||| | |||||||||    
T  27158990 agggttaatacctctttt-cgtccatgtaatattagcgaatttcagttttagtc 27159042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 29444819 - 29444860
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||||| ||||||| | |||||||||||    
T  29444819 ttttcgtccctgtaatattaacgaattctgattttagtccct 29444860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 14412044 - 14411989
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| | || || |||||||| |||||| ||||||||||||||    
T  14412044 agggtaaatacctctttt-catctctataatattaacgaatttcggttttagtccct 14411989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 322 - 381
Target Start/End: Complemental strand, 20709439 - 20709379
Alignment:
Q  322 tccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    ||||||||||| || |||| ||| | ||||| |||| ||||||||||||||||||||||||    
T  20709439 tccctgtaatttcagattcctcccacttttgatccctgtaatttcatattcctccactttt 20709379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 20709590 - 20709535
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||| |||||||||||| ||||| |||||||||| ||||||  |||||||||||||    
T  20709590 agggttaatacctctttt-cgtccatgtaatattaacgaattttggttttagtccct 20709535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 23806330 - 23806217
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||          ||||||||| |||||||||||| ||||||||    
T  23806330 gggtaaatacctcttttt-gtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 23806232  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  23806231 tccacttttggtccc 23806217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 356
Target Start/End: Original strand, 19251470 - 19251583
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    ||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||| |          ||||||||| |||||||||||| ||||||||    
T  19251470 agggttaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattct 19251568  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  19251569 tccacttttggtccc 19251583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 17463470 - 17463356
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||  ||          ||||||||| |||||||||||| |||||||    
T  17463470 agggtaaatacctctttt-cgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattc 17463372  T
Q  341 ttccatttttggtccc 356  Q
    ||||| ||||| ||||    
T  17463371 ttccacttttgatccc 17463356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 17850587 - 17850643
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  17850587 gggtaaatacctctttt-cgtccctgtaatattagcgaattccgattttagtccctat 17850643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 356
Target Start/End: Complemental strand, 26236474 - 26236360
Alignment:
Q  242 gagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct-atnnnnnnnnntttagatttagtccctgtaattccatattc 340  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |            ||||||||| |||||||||||| || ||||    
T  26236474 gagggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccttggaaaaaaaagatttagattttgtccctgtaatttcagattc 26236376  T
Q  341 ttccatttttggtccc 356  Q
    ||||||||||||||||    
T  26236375 ttccatttttggtccc 26236360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 26560569 - 26560667
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    |||||||||||||||||||| |||||| || ||||||||||| |         |||||||||||||||||||||| || ||||||||| ||||||||||    
T  26560569 ttttcgtccctgtaatattaacgaatttcgattttagtccctgtaaaaaaagatttagatttagtccctgtaatttcagattcttccacttttggtccc 26560667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 15106443 - 15106332
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttc 343  Q
    ||||||||||||||||| |||||| |||||||||||||||| || ||||||||||| |         ||||||||| |||||||||||| || |||||||    
T  15106443 gggtaaatacctctttt-cgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaaatttagattttgtccctgtaatttcagattcttc 15106345  T
Q  344 catttttggtccc 356  Q
    || ||||| ||||    
T  15106344 cacttttgatccc 15106332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 17850965 - 17850913
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  17850965 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtc 17850913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 22263572 - 22263520
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  22263572 agggtaaatacctctttt-cgttcctgtaatattagcgaattccggttttagtc 22263520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 19251848 - 19251793
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  19251848 agggtaaatacctctttt-cgtccttgtaatattagtgaattccggttttagtccct 19251793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 352
Target Start/End: Original strand, 23854688 - 23854797
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||||||||||  ||          ||||||||| |||||||||||| ||||||||    
T  23854688 gggttaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattct 23854786  T
Q  342 tccatttttgg 352  Q
    |||| ||||||    
T  23854787 tccacttttgg 23854797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 23855072 - 23855025
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggtttt 292  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23855072 gggtaaatacctctttt-cgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 301
Target Start/End: Complemental strand, 12419087 - 12419044
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  12419087 ttttggtccctgtaatattagcgaattccggttttagtccctat 12419044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 301
Target Start/End: Complemental strand, 12431147 - 12431104
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  12431147 ttttggtccctgtaatattagcgaattccggttttagtccctat 12431104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 299
Target Start/End: Original strand, 39878100 - 39878156
Alignment:
Q  241 agagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||| ||||  |||| ||||||||||||||||||||||||||||||||    
T  39878100 agagggtaaatacctttttt--gtccttgtaatattagcgaattccggttttagtccct 39878156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 42670717 - 42670771
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  42670717 gggttaatacctctttt-cgtccctgtaatagtagcgaattccggttttagtccct 42670771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 258 - 296
Target Start/End: Complemental strand, 13254801 - 13254763
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13254801 ttttcgtccctgtaatattagcgaattccggttttagtc 13254763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 26135830 - 26135871
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  26135830 ttttcgtccctgtaatattagcgaattccgattttagtccct 26135871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 26560932 - 26560880
Alignment:
Q  245 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc 298  Q
    |||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  26560932 ggtaaatacctctttt-cgtccttgtaatattagcgaattccgattttagtccc 26560880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 20498746 - 20498801
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||||    
T  20498746 agggtaaatacctctttt-cgtctatgtaatattagcgaattacggttttagtccct 20498801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 356
Target Start/End: Original strand, 22263205 - 22263304
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnn-tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||| ||||||||||||||| |||||| |||||||||| ||||          ||||||||| |||||||||||| |||||||||||| ||||||||||    
T  22263205 ttttcatccctgtaatattagagaattctggttttagtctctatgaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccc 22263304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 26236126 - 26236181
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||| ||||||| ||||| |||||||||||||||||| |||||||||||||    
T  26236126 agggtaaatatctctttt-cgtccttgtaatattagcgaattctggttttagtccct 26236181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 297
Target Start/End: Complemental strand, 30960036 - 30959997
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  30960036 ttttggtccctgtaatattagcgaattccggttttagtcc 30959997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 42671097 - 42671043
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||||||| |||||||||||| | ||||||||||||    
T  42671097 gggtaaatacctcttttt-gtccctgtagtattagcgaatttcagttttagtccct 42671043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 296
Target Start/End: Original strand, 17463105 - 17463143
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  17463105 ttttcgtccctataatattagcgaattccggttttagtc 17463143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 23046706 - 23046763
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||||||| ||| ||||    
T  23046706 agggtaaatacctctttt-cgtccttgtaatatgagcgaattccggttttggtctctat 23046763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 299
Target Start/End: Original strand, 33290061 - 33290103
Alignment:
Q  257 tttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    
T  33290061 tttttggtccctgtaatattagcgaattccagttttagtccct 33290103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 13284778 - 13284737
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  13284778 ttttggtccctgtaatattagcgaatttcggttttagtccct 13284737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 23047961 - 23047913
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttt 292  Q
    ||||||||||||| |||| |||||||||||||| ||||||||||||||||    
T  23047961 agggtaaatacctatttt-cgtccctgtaatatgagcgaattccggtttt 23047913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 26136195 - 26136143
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||||||||||||||| ||||| |||||||||| |||||| ||||||||||||    
T  26136195 gggtaaatacctctttt-cgtccttgtaatattaacgaatttcggttttagtcc 26136143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 30958697 - 30958738
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  30958697 ttttggtccctgtaatattagcgaatttcggttttagtccct 30958738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 292
Target Start/End: Original strand, 44097737 - 44097786
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggtttt 292  Q
    |||||||||| || ||||||||||||||||||  ||||||||||||||||    
T  44097737 agggtaaatatctatttttcgtccctgtaataagagcgaattccggtttt 44097786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 30390528 - 30390572
Alignment:
Q  312 ttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||    
T  30390528 ttagattttgtccctgtaatttcatattcttccacttttggtccc 30390572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 13284411 - 13284461
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttag 294  Q
    ||||| |||||| |||||| ||||||||||||| ||||||||||||||||||    
T  13284411 agggttaataccacttttt-gtccctgtaatatcagcgaattccggttttag 13284461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 15106067 - 15106121
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||| ||||||| |||||| |||||||||||||||| |||||||| |||||    
T  15106067 gggtaaatatctctttt-cgtccccgtaatattagcgaatttcggttttaatccct 15106121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 356
Target Start/End: Complemental strand, 33290412 - 33290314
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccctatnnnnnnnnntttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    |||| ||||||||||||||||||||||| ||||||| ||||| |          |||||||| | || ||||||| |||||||||||| ||||||||||    
T  33290412 ttttggtccctgtaatattagcgaattctggttttaatccctgtaaaaaaaaaattagattttgaccttgtaatttcatattcttccacttttggtccc 33290314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 34548574 - 34548628
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||| |||||| ||||||||||||||||| |||||  |||||||||||||    
T  34548574 gggtaaatacttctttt-cgtccctgtaatattagtgaattttggttttagtccct 34548628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 39878450 - 39878397
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| |||| ||||||||||||||||||| ||||| ||||||    
T  39878450 gggtaaatacctcttttt-gtcc-tgtaatattagcgaattccagttttcgtccct 39878397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 356
Target Start/End: Complemental strand, 22263498 - 22263456
Alignment:
Q  314 agatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    |||||| |||||||||||| |||||||||||| ||||||||||    
T  22263498 agattttgtccctgtaatttcatattcttccacttttggtccc 22263456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Complemental strand, 17850896 - 17850851
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||| |||||||||||| || ||||||||| ||||||||||    
T  17850896 tttagattttgtccctgtaatttcagattcttccacttttggtccc 17850851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 381
Target Start/End: Complemental strand, 22263419 - 22263358
Alignment:
Q  321 gtccctgtaattccatattcttcc-atttttggtcccagtaatttcatattcctccactttt 381  Q
    |||||||||||| || |||| ||| | |||||||||| ||||||||| ||||||||||||||    
T  22263419 gtccctgtaatttcagattcctcctagttttggtccctgtaatttcaaattcctccactttt 22263358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 30390472 - 30390513
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||| |||||||||||||||||||| ||||| |||||    
T  30390472 ttttcgtccatgtaatattagcgaattccgattttaatccct 30390513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 13254496 - 13254551
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||  ||| |||||||||||||||||||  ||||||| |||||    
T  13254496 agggtaaatacctctttc-cgttcctgtaatattagcgaattttggttttactccct 13254551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 356
Target Start/End: Original strand, 42670788 - 42670832
Alignment:
Q  312 ttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    |||||||| |||| ||||||| |||||||||||| ||||||||||    
T  42670788 ttagattttgtccttgtaatttcatattcttccacttttggtccc 42670832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 44099000 - 44098953
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggtttt 292  Q
    ||||||||| ||||||| |||||||||||||| ||||||||| ||||||    
T  44099000 gggtaaatatctctttt-cgtccctgtaatatgagcgaattctggtttt 44098953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 355
Target Start/End: Complemental strand, 12355 - 12248
Alignment:
Q  249 aatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat--nnnnnnnnntttagatttagtccctgtaattccatattcttccat 346  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||           ||||||||| |||||||||||| || |||||||||     
T  12355 aatacctctttt-cgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccac 12257  T
Q  347 ttttggtcc 355  Q
    |||||||||    
T  12256 ttttggtcc 12248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 7579 - 7524
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  7579 agggtaaatacctatttt-cgtccctgtaatattagcgaattccggttttagtccct 7524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 7227 - 7339
Alignment:
Q  245 ggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc--tatnnnnnnnnntttagatttagtccctgtaattccatattctt 342  Q
    |||||||||||||||| ||||| |||||||||||||||||| ||| ||||| ||  ||          ||||||||| |||||||||||| |||||||||    
T  7227 ggtaaatacctctttt-cgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 7325  T
Q  343 ccatttttggtccc 356  Q
    ||| ||| ||||||    
T  7326 ccactttcggtccc 7339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 3868 - 3923
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  3868 agggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttagtccct 3923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 1786 - 1728
Alignment:
Q  242 gagggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||    
T  1786 gagggtaaatccctctttt-cgtccctgtaatattaacgaattccggttttagtccctat 1728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 1410 - 1465
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| || ||| |||||||| ||||||| || |||||||||||    
T  1410 agggtaaatacctctttt-cgacccggtaatatttgcgaatttcgattttagtccct 1465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 243 - 356
Target Start/End: Complemental strand, 4941 - 4828
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat-nnnnnnnnntttagatttagtccctgtaattccatattct 341  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||| |          ||||||||| |||| ||||||| ||||||||    
T  4941 agggtaaatacctctttt-cgtccctgtaatattagcaaattccggttttaatccctgtaaaaataagatttagattttgtccttgtaatttcatattct 4843  T
Q  342 tccatttttggtccc 356  Q
    |||| ||||||||||    
T  4842 tccacttttggtccc 4828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 4561 - 4616
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  4561 agggtaaatacctctttt-cgtccttgtaatattagcgaattccgattttagtccct 4616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 243 - 298
Target Start/End: Original strand, 8324 - 8378
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccc 298  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  8324 agggtaaatacctctttt-cgtccctgtaatattagcgaatttcggttttagtccc 8378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 8700 - 8646
Alignment:
Q  244 gggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||  |||||| || |||| |||||||||||||||||||||||||||||    
T  8700 gggtaaatactgcttttt-gttcctgcaatattagcgaattccggttttagtccct 8646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 3)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 297
Target Start/End: Original strand, 4879 - 4932
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||||||||||||||||| || ||||||||||||||||||| ||||||||||||    
T  4879 agggtaaatacctcttttt-gttcctgtaatattagcgaatttcggttttagtcc 4932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 297
Target Start/End: Complemental strand, 5112 - 5073
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtcc 297  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  5112 ttttcgtccatgtaatattagcgaattccggtttttgtcc 5073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 356
Target Start/End: Complemental strand, 5058 - 5013
Alignment:
Q  311 tttagatttagtccctgtaattccatattcttccatttttggtccc 356  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||    
T  5058 tttagatttagtccctgtaattttagattcttccacttttggtccc 5013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 4666 - 4723
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    ||||||||||||||||||  ||||||| |||||||||||||||| ||||||||||||||    
T  4666 agggtaaatacctctttta-gtccctgcaatattagcgaattccagttttagtccctat 4723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 6058 - 6003
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||| |||||||||||    
T  6058 agggtaaatacctcttttg-gtccctgcaatattagcgaattccgattttagtccct 6003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 16007 - 15955
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtc 296  Q
    |||||||||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  16007 agggtaaatatctctttt-cgtccatgtaatattagcgaattccggttttagtc 15955  T

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Target: scaffold0157 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 301
Target Start/End: Complemental strand, 267 - 224
Alignment:
Q  258 ttttcgtccctgtaatattagcgaattccggttttagtccctat 301  Q
    |||| |||||| ||||||||||||||||| ||||||||||||||    
T  267 ttttagtccctataatattagcgaattccagttttagtccctat 224  T

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Target: scaffold0881 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 218 - 269
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagt 295  Q
    |||||| ||| |||||||| |||||||||| |||||||||||| |||||||||    
T  218 agggtagatatctcttttt-gtccctgtaaaattagcgaattctggttttagt 269  T

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Target: scaffold0881; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 596 - 541
Alignment:
Q  243 agggtaaatacctctttttcgtccctgtaatattagcgaattccggttttagtccct 299  Q
    |||||||||||||||||||  || ||| ||||||| ||||||||||||||| |||||    
T  596 agggtaaatacctcttttta-tctctggaatattaacgaattccggttttactccct 541  T

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