View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20550_low_13 (Length: 240)

Name: NF20550_low_13
Description: NF20550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20550_low_13
NF20550_low_13
[»] chr4 (44 HSPs)
chr4 (5-224)||(4780596-4780814)
chr4 (1-146)||(54175845-54175990)
chr4 (1-146)||(7238829-7238973)
chr4 (1-145)||(11125973-11126117)
chr4 (1-145)||(19298452-19298599)
chr4 (61-146)||(49897351-49897436)
chr4 (84-145)||(53130875-53130936)
chr4 (63-147)||(2494077-2494161)
chr4 (1-145)||(44886183-44886328)
chr4 (61-145)||(41692445-41692529)
chr4 (61-146)||(660179-660263)
chr4 (84-145)||(29618251-29618312)
chr4 (82-142)||(11125267-11125327)
chr4 (61-121)||(24739037-24739097)
chr4 (82-145)||(12928562-12928625)
chr4 (82-145)||(36889691-36889754)
chr4 (1-142)||(43495840-43495988)
chr4 (61-142)||(50715690-50715772)
chr4 (11-133)||(6046363-6046487)
chr4 (61-145)||(29100834-29100921)
chr4 (61-145)||(7070475-7070559)
chr4 (81-145)||(9519036-9519095)
chr4 (87-146)||(27838986-27839046)
chr4 (81-144)||(41104012-41104074)
chr4 (87-146)||(54806864-54806923)
chr4 (61-143)||(39136054-39136136)
chr4 (84-145)||(28137498-28137559)
chr4 (84-145)||(42882053-42882114)
chr4 (84-145)||(13222192-13222254)
chr4 (4-46)||(27814422-27814464)
chr4 (61-123)||(33802970-33803032)
chr4 (96-145)||(660595-660644)
chr4 (96-145)||(32640758-32640807)
chr4 (96-145)||(45032232-45032281)
chr4 (86-142)||(5028995-5029053)
chr4 (90-145)||(42314450-42314504)
chr4 (89-127)||(40796128-40796166)
chr4 (84-134)||(40956925-40956975)
chr4 (89-133)||(2494586-2494631)
chr4 (84-145)||(17554802-17554863)
chr4 (97-145)||(46255240-46255289)
chr4 (1-46)||(49867213-49867258)
chr4 (1-41)||(5028912-5028952)
chr4 (109-145)||(24739112-24739148)
[»] chr5 (34 HSPs)
chr5 (1-146)||(19134770-19134915)
chr5 (1-146)||(1349666-1349814)
chr5 (80-145)||(5246525-5246590)
chr5 (81-148)||(35039749-35039816)
chr5 (1-142)||(19135030-19135173)
chr5 (1-146)||(35781379-35781523)
chr5 (74-146)||(35040995-35041067)
chr5 (1-145)||(20515228-20515371)
chr5 (81-145)||(35040423-35040488)
chr5 (61-146)||(4727853-4727939)
chr5 (63-145)||(28794013-28794095)
chr5 (81-145)||(5249361-5249425)
chr5 (61-145)||(25458523-25458607)
chr5 (1-145)||(18585691-18585828)
chr5 (83-145)||(38184303-38184364)
chr5 (83-145)||(38213993-38214054)
chr5 (84-145)||(43582986-43583045)
chr5 (64-145)||(2211246-2211327)
chr5 (61-145)||(6429486-6429571)
chr5 (61-145)||(12545884-12545969)
chr5 (61-141)||(34383394-34383474)
chr5 (84-145)||(19950750-19950811)
chr5 (65-145)||(40591326-40591406)
chr5 (81-145)||(35040166-35040230)
chr5 (74-145)||(1349252-1349323)
chr5 (98-145)||(35781642-35781689)
chr5 (84-145)||(38494508-38494570)
chr5 (1-46)||(6537988-6538033)
chr5 (110-146)||(35781919-35781955)
chr5 (1-41)||(40591427-40591467)
chr5 (84-123)||(7293449-7293488)
chr5 (96-142)||(22793327-22793373)
chr5 (1-46)||(17367508-17367553)
chr5 (96-145)||(30054498-30054547)
[»] chr3 (53 HSPs)
chr3 (1-143)||(8708032-8708175)
chr3 (1-143)||(9059919-9060062)
chr3 (1-146)||(11633075-11633218)
chr3 (61-146)||(10333112-10333197)
chr3 (61-146)||(21388411-21388496)
chr3 (1-145)||(10297425-10297568)
chr3 (61-142)||(12101076-12101157)
chr3 (11-146)||(54981898-54982033)
chr3 (1-142)||(47567567-47567709)
chr3 (61-145)||(54356281-54356365)
chr3 (1-145)||(46515037-46515182)
chr3 (1-145)||(24842413-24842556)
chr3 (61-146)||(54143004-54143089)
chr3 (82-145)||(33832810-33832873)
chr3 (81-146)||(3942589-3942654)
chr3 (81-145)||(26167898-26167965)
chr3 (61-145)||(45586112-45586196)
chr3 (61-144)||(10332676-10332758)
chr3 (82-145)||(24485606-24485669)
chr3 (1-142)||(10317246-10317386)
chr3 (81-145)||(42583605-42583670)
chr3 (61-145)||(26760577-26760661)
chr3 (61-145)||(30498429-30498513)
chr3 (61-145)||(10297198-10297283)
chr3 (63-146)||(40285036-40285119)
chr3 (81-146)||(7433611-7433676)
chr3 (81-146)||(44077811-44077878)
chr3 (81-145)||(54981617-54981681)
chr3 (88-145)||(54585851-54585909)
chr3 (84-144)||(3781422-3781485)
chr3 (84-144)||(3821426-3821489)
chr3 (1-46)||(10334297-10334342)
chr3 (1-134)||(34794401-34794536)
chr3 (1-145)||(13207895-13208038)
chr3 (81-145)||(21459626-21459690)
chr3 (86-142)||(47567774-47567830)
chr3 (1-35)||(7335551-7335585)
chr3 (96-138)||(14900369-14900411)
chr3 (63-145)||(53877653-53877735)
chr3 (96-145)||(3789742-3789791)
chr3 (61-126)||(10317036-10317100)
chr3 (96-145)||(44868984-44869033)
chr3 (82-142)||(2788463-2788523)
chr3 (1-41)||(3942506-3942546)
chr3 (1-39)||(12040099-12040137)
chr3 (1-106)||(23027521-23027626)
chr3 (84-133)||(3789579-3789628)
chr3 (84-133)||(3827304-3827353)
chr3 (96-145)||(23027788-23027837)
chr3 (84-145)||(55158104-55158165)
chr3 (1-41)||(40459714-40459754)
chr3 (111-143)||(42845433-42845465)
chr3 (1-41)||(54585765-54585805)
[»] chr2 (34 HSPs)
chr2 (1-146)||(42676476-42676622)
chr2 (1-142)||(14787216-14787357)
chr2 (61-146)||(7495595-7495679)
chr2 (61-146)||(39844209-39844294)
chr2 (81-146)||(30632214-30632279)
chr2 (61-145)||(40662747-40662831)
chr2 (82-145)||(43968226-43968289)
chr2 (1-145)||(3256114-3256260)
chr2 (1-146)||(21479417-21479561)
chr2 (61-146)||(30668855-30668940)
chr2 (81-146)||(43968576-43968641)
chr2 (74-146)||(36950338-36950410)
chr2 (63-146)||(20612705-20612788)
chr2 (90-145)||(38722859-38722914)
chr2 (89-143)||(15458960-15459014)
chr2 (1-146)||(30666272-30666417)
chr2 (85-142)||(1826771-1826828)
chr2 (84-145)||(3197003-3197064)
chr2 (61-146)||(30620564-30620649)
chr2 (61-146)||(30623185-30623270)
chr2 (1-146)||(42679359-42679501)
chr2 (91-146)||(21479220-21479275)
chr2 (96-146)||(34454176-34454226)
chr2 (81-145)||(43004906-43004974)
chr2 (74-142)||(9420272-9420341)
chr2 (1-46)||(38722946-38722991)
chr2 (84-133)||(45654955-45655004)
chr2 (81-145)||(7074908-7074972)
chr2 (1-46)||(34453825-34453870)
chr2 (96-140)||(559531-559575)
chr2 (84-146)||(18296908-18296969)
chr2 (96-145)||(41145111-41145160)
chr2 (1-41)||(7074829-7074869)
chr2 (99-143)||(9093359-9093403)
[»] scaffold0016 (2 HSPs)
scaffold0016 (1-146)||(205256-205400)
scaffold0016 (1-143)||(106010-106151)
[»] chr7 (61 HSPs)
chr7 (1-146)||(38319954-38320098)
chr7 (77-146)||(24162188-24162257)
chr7 (1-145)||(5800980-5801126)
chr7 (74-146)||(24689349-24689423)
chr7 (1-142)||(26246564-26246706)
chr7 (1-146)||(26970732-26970876)
chr7 (61-147)||(30121280-30121366)
chr7 (61-142)||(23640754-23640835)
chr7 (1-145)||(24689064-24689206)
chr7 (64-142)||(47222539-47222618)
chr7 (1-145)||(35526488-35526635)
chr7 (84-145)||(21696483-21696543)
chr7 (17-145)||(30121871-30121999)
chr7 (81-146)||(46897950-46898015)
chr7 (61-145)||(10283298-10283382)
chr7 (61-145)||(24688785-24688869)
chr7 (61-145)||(26970413-26970497)
chr7 (1-145)||(4399670-4399816)
chr7 (74-134)||(21696803-21696863)
chr7 (61-133)||(29854700-29854772)
chr7 (81-145)||(40261920-40261984)
chr7 (84-143)||(33858017-33858076)
chr7 (1-142)||(14312398-14312538)
chr7 (84-138)||(26151189-26151243)
chr7 (82-145)||(44434700-44434764)
chr7 (74-145)||(45447587-45447661)
chr7 (84-146)||(10282501-10282563)
chr7 (84-146)||(11750050-11750112)
chr7 (84-145)||(10282700-10282761)
chr7 (74-146)||(35525915-35525990)
chr7 (61-133)||(4594469-4594541)
chr7 (82-145)||(30122189-30122252)
chr7 (84-146)||(1644543-1644605)
chr7 (99-145)||(18984714-18984760)
chr7 (99-145)||(18989529-18989575)
chr7 (99-145)||(18999343-18999389)
chr7 (61-143)||(35223799-35223880)
chr7 (1-46)||(1644319-1644364)
chr7 (96-145)||(22644819-22644868)
chr7 (84-145)||(35527472-35527532)
chr7 (108-141)||(38087766-38087799)
chr7 (84-145)||(45689543-45689603)
chr7 (81-121)||(11486406-11486446)
chr7 (90-145)||(15641014-15641070)
chr7 (61-137)||(23808931-23809007)
chr7 (1-41)||(24162107-24162147)
chr7 (85-141)||(37986005-37986061)
chr7 (84-143)||(26175462-26175521)
chr7 (113-143)||(7630126-7630156)
chr7 (84-122)||(15738914-15738952)
chr7 (1-46)||(15641472-15641517)
chr7 (84-145)||(18990611-18990672)
chr7 (97-126)||(30594226-30594255)
chr7 (84-145)||(35526221-35526281)
chr7 (2-46)||(10281998-10282042)
chr7 (117-145)||(11485967-11485995)
chr7 (2-46)||(26175377-26175421)
chr7 (97-145)||(29102678-29102726)
chr7 (1-41)||(31278300-31278340)
chr7 (1-33)||(44434619-44434651)
chr7 (1-41)||(47222486-47222526)
[»] chr8 (43 HSPs)
chr8 (1-143)||(1030394-1030538)
chr8 (1-145)||(35308073-35308219)
chr8 (84-145)||(342700-342761)
chr8 (61-146)||(27963965-27964050)
chr8 (65-146)||(40737436-40737517)
chr8 (61-145)||(5424485-5424569)
chr8 (81-145)||(13916544-13916608)
chr8 (81-142)||(17072996-17073058)
chr8 (81-142)||(17575212-17575274)
chr8 (61-146)||(6007682-6007767)
chr8 (81-146)||(27881323-27881388)
chr8 (81-146)||(27917546-27917611)
chr8 (81-146)||(28021504-28021569)
chr8 (65-145)||(15199741-15199821)
chr8 (82-145)||(27882191-27882254)
chr8 (82-145)||(28022371-28022434)
chr8 (82-144)||(27964827-27964889)
chr8 (81-145)||(5424782-5424847)
chr8 (61-142)||(5764895-5764976)
chr8 (61-146)||(40796176-40796263)
chr8 (61-146)||(17073297-17073382)
chr8 (61-146)||(17574888-17574973)
chr8 (84-138)||(28152484-28152538)
chr8 (81-142)||(28828047-28828110)
chr8 (96-143)||(9269294-9269341)
chr8 (1-145)||(27965022-27965168)
chr8 (61-146)||(5765365-5765453)
chr8 (88-146)||(6008039-6008097)
chr8 (1-145)||(27882386-27882531)
chr8 (1-145)||(28022566-28022711)
chr8 (84-141)||(32855144-32855202)
chr8 (1-113)||(1153633-1153744)
chr8 (85-145)||(24981519-24981579)
chr8 (84-145)||(45182967-45183025)
chr8 (84-133)||(1580302-1580351)
chr8 (93-145)||(29475216-29475268)
chr8 (6-45)||(4444036-4444075)
chr8 (11-41)||(5765312-5765342)
chr8 (61-139)||(339872-339952)
chr8 (108-144)||(5765098-5765134)
chr8 (1-41)||(28152581-28152621)
chr8 (61-145)||(32693545-32693629)
chr8 (1-33)||(35103025-35103057)
[»] chr1 (47 HSPs)
chr1 (1-143)||(47796300-47796444)
chr1 (3-146)||(49243788-49243931)
chr1 (1-146)||(11981722-11981865)
chr1 (1-146)||(17054236-17054381)
chr1 (1-146)||(24686202-24686346)
chr1 (61-146)||(6844472-6844557)
chr1 (61-142)||(33674993-33675074)
chr1 (61-145)||(48738505-48738589)
chr1 (65-146)||(45807990-45808072)
chr1 (61-145)||(26271943-26272028)
chr1 (61-145)||(45296767-45296852)
chr1 (11-142)||(43325904-43326035)
chr1 (1-138)||(47794996-47795131)
chr1 (61-145)||(42834919-42835001)
chr1 (61-146)||(47795431-47795516)
chr1 (82-142)||(6318922-6318982)
chr1 (61-146)||(47795945-47796030)
chr1 (61-145)||(43114956-43115040)
chr1 (1-145)||(8795313-8795459)
chr1 (1-122)||(24705397-24705518)
chr1 (84-145)||(43114755-43114817)
chr1 (82-146)||(11981120-11981187)
chr1 (1-46)||(42429705-42429750)
chr1 (74-146)||(42834619-42834692)
chr1 (74-127)||(47794821-47794874)
chr1 (85-146)||(49480262-49480323)
chr1 (1-145)||(12016852-12016998)
chr1 (1-123)||(39842797-39842920)
chr1 (81-137)||(40793031-40793087)
chr1 (1-46)||(10338224-10338269)
chr1 (74-146)||(11981418-11981493)
chr1 (2-145)||(33241089-33241232)
chr1 (61-146)||(52404167-52404257)
chr1 (1-46)||(6941467-6941512)
chr1 (96-145)||(33813287-33813336)
chr1 (96-145)||(33872757-33872806)
chr1 (96-145)||(46675732-46675781)
chr1 (1-46)||(47793062-47793107)
chr1 (89-133)||(47882345-47882389)
chr1 (96-143)||(9626191-9626238)
chr1 (84-145)||(42429604-42429666)
chr1 (84-126)||(45378367-45378409)
chr1 (1-46)||(46675671-46675716)
chr1 (96-145)||(47793335-47793383)
chr1 (61-133)||(6941381-6941452)
chr1 (114-146)||(6941651-6941683)
chr1 (1-41)||(49480178-49480218)
[»] chr6 (16 HSPs)
chr6 (61-146)||(2258698-2258783)
chr6 (61-145)||(21980919-21981003)
chr6 (61-138)||(7204795-7204872)
chr6 (65-145)||(33438676-33438755)
chr6 (74-145)||(10780179-10780250)
chr6 (61-145)||(26001246-26001330)
chr6 (89-130)||(9740606-9740647)
chr6 (96-145)||(14094090-14094139)
chr6 (11-142)||(26209135-26209268)
chr6 (1-46)||(4826140-4826185)
chr6 (1-41)||(21092694-21092734)
chr6 (11-46)||(3306923-3306958)
chr6 (84-122)||(1577424-1577462)
chr6 (117-145)||(3307396-3307424)
chr6 (81-133)||(7858479-7858531)
chr6 (117-145)||(20469376-20469404)
[»] scaffold0024 (1 HSPs)
scaffold0024 (61-142)||(150188-150269)
[»] scaffold0224 (2 HSPs)
scaffold0224 (61-145)||(22000-22082)
scaffold0224 (74-146)||(21700-21773)
[»] scaffold0267 (1 HSPs)
scaffold0267 (96-144)||(3243-3291)
[»] scaffold0376 (1 HSPs)
scaffold0376 (81-146)||(1955-2019)
[»] scaffold0625 (2 HSPs)
scaffold0625 (99-145)||(7186-7232)
scaffold0625 (84-145)||(6088-6149)
[»] scaffold0100 (1 HSPs)
scaffold0100 (84-145)||(38585-38647)
[»] scaffold0123 (1 HSPs)
scaffold0123 (84-145)||(29103-29164)
[»] scaffold0006 (1 HSPs)
scaffold0006 (96-145)||(71396-71445)


Alignment Details
Target: chr4 (Bit Score: 159; Significance: 8e-85; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 5 - 224
Target Start/End: Original strand, 4780596 - 4780814
Alignment:
Q  5 aacagtttcaaatgagaagctgttaagagcagcttctaaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaattttgt 104  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||         ||||||||||||||||||||||||||||||||||||||||||||    
T  4780596 aacaatttcaaatgagaagctgttaagagcagcttttaaaaattagatttttttt-agaggagagacataatattgtttaaaagattgaactaattttgt 4780694  T
Q  105 aataaaaaatctcttttatatagttgtatccaaacaaactaggaatgagatgagatgaaatgatctaaaaataaaaatannnnnnnggctacttacattt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||    
T  4780695 aataaaaaatctcttttatatagttgtatccaaacaaactaggaatgagatgagatgaaatgatctaaaaataaaaatatttttttggctacttacattt 4780794  T
Q  205 ctttttgatatattaaagtt 224  Q
    ||||||||||||||||||||    
T  4780795 ctttttgatatattaaagtt 4780814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 54175990 - 54175845
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| |||||||||||||| |||||||||||||||| ||||| ||||         |||||||||| | ||||| ||||||||||||||||||||    
T  54175990 taaaaacagcttcaaatgagaagcggttaagagcagcttctcaaaaaatagatttttttt-agaggagagagaaaatatggtttaaaagattgaactaat 54175892  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  54175891 tttgtaacaaaaaatcccttttatatagttgtatccaaacaaactag 54175845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 7238829 - 7238973
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaatt 100  Q
    ||||||||| |||||||||||| ||| |||||||||||||| ||||  | |         |||||||||| | |||||||||||||||||||||||||||    
T  7238829 taaaaacagcttcaaatgagaaactgctaagagcagcttctcaaaaa-ataaatttttttagaggagagagaaaatattgtttaaaagattgaactaatt 7238927  T
Q  101 ttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||    
T  7238928 ttgtaacaaaaattcccttttatatagttgtatccaaacaaactag 7238973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 11126117 - 11125973
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaatt 100  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||  | |         |||||||||| |||||||| ||||||||||||||||||||    
T  11126117 taaaaacagcttcaaatgagaagctgttaagagcatcttctcaaaaaaatagatttttttagaggagagagataatattttttaaaagattgaactaatt 11126018  T
Q  101 ttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||| |||||  ||||||||| ||||||||| |||||||||||    
T  11126017 ttgtaaaaaaaatactcttttatgtagttgtattcaaacaaacta 11125973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 19298452 - 19298599
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||  ||||||||||||||||||||||||||||||| ||||| ||||         |||||||||| | |||||  |||||||||||||||||||    
T  19298452 taaaaacaacttcaaatgagaagctgttaagagcagcttctcaaaaaatagatttttttttagaggagagagaaaatatgatttaaaagattgaactaat 19298551  T
Q  100 tttgta--ataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||  | |||||||| ||||||||||||||||| |||||||||||    
T  19298552 tttgtaacaaaaaaaatcccttttatatagttgtattcaaacaaacta 19298599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 49897351 - 49897436
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||| || | ||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  49897351 agaggagggagaaaatattgtttaaaagattgaactaattttgtaacaaataatcccttttatatagttgtatccaaacaaactag 49897436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 53130875 - 53130936
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  53130875 aaaagattgaactaattttgtaacaaaaaatctcttttatatagttgtatccaaacaaacta 53130936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 2494077 - 2494161
Alignment:
Q  63 aggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactagg 147  Q
    |||||||| | |||||  ||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2494077 aggagagagaaaatatgatttaaaatattgaattaattttgtaacaaaaaatctcttttatatagttgtatccaaacaaactagg 2494161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 44886328 - 44886183
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||  |||||||||||||||||||| |||||||||| ||||| ||||         |||||||||| | |||||  |||||||||||||||||||    
T  44886328 taaaaacaacttcaaatgagaagctgttaaaagcagcttctcaaaaaatagaatttttgt-agaggagagagaaaatatgatttaaaagattgaactaat 44886230  T
Q  100 tttgtaa-taaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||  |||||||| |||||||||||||||||||||| ||||||    
T  44886229 tttgtaacaaaaaaatcccttttatatagttgtatccaaaaaaacta 44886183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 41692529 - 41692445
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | |||||  |||||||||||||| ||||||||||| ||||||||  ||||||||| ||||||||||||||||||    
T  41692529 agaggagagagaaaatatgatttaaaagattgaattaattttgtaacaaaaaatcctttttatataattgtatccaaacaaacta 41692445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 660263 - 660179
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||| ||||||||||| |||||||||||||| | |||||| ||||||| ||||||||| ||||||||||||    
T  660263 agaggagagagaaaatattttttaaaagattaaactaattttgtaa-ataaaatcccttttatgtagttgtattcaaacaaactag 660179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 29618312 - 29618251
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||| ||||||||||||||||| |||||| ||||||||||||||||| ||||||||||    
T  29618312 aaaagattaaactaattttgtaataacaaatcttttttatatagttgtatctaaacaaacta 29618251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 11125327 - 11125267
Alignment:
Q  82 ttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    ||||||||||||||||||||||| |  ||||||| ||||||||||||||||||||||||||    
T  11125327 ttaaaagattgaactaattttgttactaaaaatcccttttatatagttgtatccaaacaaa 11125267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 24739037 - 24739097
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctctttt 121  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  24739037 agaggagagagataatatggtttaaaaaattgaactaattttgtaataaaaaatccctttt 24739097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 12928625 - 12928562
Alignment:
Q  82 ttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||||| ||||||||  |||| ||||| |||||||||||||||||    
T  12928625 ttaaaagattgaactaattttgtaacaaaaaatcatttttttatagatgtatccaaacaaacta 12928562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 36889691 - 36889754
Alignment:
Q  82 ttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||||| ||||||||  |||||||  |||||||||||||||||||    
T  36889691 ttaaaagattgaactaattttgtaacaaaaaatcatttttataccgttgtatccaaacaaacta 36889754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 43495988 - 43495840
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    |||||| || ||||||| ||||||||||||||||||||||| ||||||||||         |||||||||| | |||||  ||||||||||| |||||||    
T  43495988 taaaaatagattcaaataagaagctgttaagagcagcttctcaaaaattagatctttttt-agaggagagagaaaatatgttttaaaagattaaactaat 43495890  T
Q  100 tttgtaataaaaaa-------tctcttttatatagttgtatccaaacaaa 142  Q
    ||||||||||||||       || ||||||||||||||||| ||||||||    
T  43495889 tttgtaataaaaaaaatctcatcccttttatatagttgtatacaaacaaa 43495840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 50715772 - 50715690
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaa-taaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    |||||||||| | |||||  || |||||||||||||||||||||||  |||||||| ||||||||||| ||||||||||||||    
T  50715772 agaggagagagaaaatatatttaaaaagattgaactaattttgtaacaaaaaaatcccttttatataggtgtatccaaacaaa 50715690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 133
Target Start/End: Original strand, 6046363 - 6046487
Alignment:
Q  11 ttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagag-gagagacataatattgtttaaaagattgaactaattttgtaata 108  Q
    ||||||||||||||||||||||||||||||| ||||| ||||         | || || ||| | |||| ||||| |||||||||||||||||| ||| |    
T  6046363 ttcaaatgagaagctgttaagagcagcttctcaaaaaatagattttttttaaaagagaaagagaaaataatgtttgaaagattgaactaattttataaca 6046462  T
Q  109 aaaaatctcttttatatagttgtat 133  Q
    ||||||||||| |||||||||||||    
T  6046463 aaaaatctcttctatatagttgtat 6046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 29100921 - 29100834
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaat---aaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | |||||  ||||||||||||||||||||||||||    |||||||   ||||||||||||||||||||||||||||    
T  29100921 agaggagagagaaaatataatttaaaagattgaactaattttgtaaacaaaaaaaattatttttatatagttgtatccaaacaaacta 29100834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 7070475 - 7070559
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | ||||| | | |||||||||||| ||| || ||| ||||||||||| |||||| |||||||||||||||||||    
T  7070475 agaggagagataaaatatgggtcaaaagattgaacaaatcttataacaaaaaatctctcttatattgttgtatccaaacaaacta 7070559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 9519095 - 9519036
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||||||||||||||| ||||||||||||     |||||||||||||||||||||    
T  9519095 tttaaaagattgaactaattttgtaacaaaaaatctctt-----tagttgtatccaaacaaacta 9519036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 27838986 - 27839046
Alignment:
Q  87 agattgaactaattttgtaataaaaaa-tctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||    
T  27838986 agattgaactaattttgtaacaaaaaaatcccttttgtatagttgtatccaaacaaactag 27839046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 144
Target Start/End: Complemental strand, 41104074 - 41104012
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaact 144  Q
    |||||||||||||||||||||||||| ||||| || |||||||||||||||||| ||| |||||    
T  41104074 tttaaaagattgaactaattttgtaacaaaaagtc-cttttatatagttgtatcgaaataaact 41104012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 54806864 - 54806923
Alignment:
Q  87 agattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||||||||| ||| ||||||||  |||||||||||| ||||||||||||||||    
T  54806864 agattgaactaattttataacaaaaaatccattttatatagttatatccaaacaaactag 54806923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 143
Target Start/End: Original strand, 39136054 - 39136136
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaac 143  Q
    |||||||||| | |||||  |||||| |||||||||||| |||||| |||||||   ||||||||||||||||||||| ||||    
T  39136054 agaggagagagaaaatatgatttaaacgattgaactaatattgtaacaaaaaattatttttatatagttgtatccaaaaaaac 39136136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 28137498 - 28137559
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||| |||||| ||||||||||||||||| |||| |||||||| ||||| |||||    
T  28137498 aaaagattgaattaatttcgtaataaaaaatctcttctatacagttgtattcaaactaacta 28137559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 42882114 - 42882053
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| || ||  ||||||||||    
T  42882114 aaaagattgaactaattttgtaacaaaaaatcgcttttatatagctgaatgtaaacaaacta 42882053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 13222254 - 13222192
Alignment:
Q  84 aaaagattgaactaattttgtaa-taaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||||||||||||  |||||||| ||||||||||  |||||| ||||||||||    
T  13222254 aaaagattgaactaattttgtaacaaaaaaatcacttttatataactgtatctaaacaaacta 13222192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 27814422 - 27814464
Alignment:
Q  4 aaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    |||||| |||||||||||||||||||||||||||||| |||||    
T  27814422 aaacagcttcaaatgagaagctgttaagagcagcttcgaaaaa 27814464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 33802970 - 33803032
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttat 123  Q
    |||||||||| | |||||   ||||||||||||||||||||||||| |||||||| |||||||    
T  33802970 agaggagagagaaaatatgtattaaaagattgaactaattttgtaacaaaaaatcgcttttat 33803032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 660644 - 660595
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||||||||| |||||| | ||||||||||||||||||||    
T  660644 taattttataataaaaaatcacttttagaaagttgtatccaaacaaacta 660595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 32640758 - 32640807
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||  | ||||||||| ||||||||||||||||||    
T  32640758 taattttgtaataaaaaaattattttatatatttgtatccaaacaaacta 32640807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 45032232 - 45032281
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||||||||| |||||| | ||||||||||||||||||||    
T  45032232 taattttataataaaaaatcacttttagaaagttgtatccaaacaaacta 45032281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 5028995 - 5029053
Alignment:
Q  86 aagattgaactaattttgtaataaa--aaatctcttttatatagttgtatccaaacaaa 142  Q
    |||||||||||||||||| || |||  ||||| ||| ||||||||||||||||||||||    
T  5028995 aagattgaactaattttggaacaaataaaatcccttgtatatagttgtatccaaacaaa 5029053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 42314450 - 42314504
Alignment:
Q  90 ttgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||| || |||||  | |||||||||||||||||||||||||||||    
T  42314450 ttgaactaattttgcaa-aaaaatccccttttatatagttgtatccaaacaaacta 42314504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 127
Target Start/End: Original strand, 40796128 - 40796166
Alignment:
Q  89 attgaactaattttgtaataaaaaatctcttttatatag 127  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  40796128 attgaactaattttgtcacaaaaaatctcttttatatag 40796166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 40956975 - 40956925
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatc 134  Q
    ||||||| ||| ||||||||||| ||||||||| |||||||||||| ||||    
T  40956975 aaaagatggaagtaattttgtaacaaaaaatctattttatatagttatatc 40956925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 2494586 - 2494631
Alignment:
Q  89 attgaactaattttgtaataaaa-aatctcttttatatagttgtat 133  Q
    |||||| ||||||||||| |||| ||||||||||||||||||||||    
T  2494586 attgaattaattttgtaacaaaaaaatctcttttatatagttgtat 2494631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 17554802 - 17554863
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||| ||| |||||||||||||  ||||||||   |||||||||||||||| ||||||||||    
T  17554802 aaaatatttaactaattttgtagcaaaaaatcatatttatatagttgtatctaaacaaacta 17554863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 46255289 - 46255240
Alignment:
Q  97 aattttgtaataaaaa-atctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| ||||| ||| ||||||||||||||||| |||||||||||    
T  46255289 aattttgtaacaaaaagatcacttttatatagttgtattcaaacaaacta 46255240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 49867258 - 49867213
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    |||||| || |||||||||||||||||| |||||||||||| ||||    
T  49867258 taaaaatagcttcaaatgagaagctgttgagagcagcttctcaaaa 49867213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 5028912 - 5028952
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct 41  Q
    ||||||||| ||||||||||||||| | |||||||||||||    
T  5028912 taaaaacagcttcaaatgagaagctttcaagagcagcttct 5028952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 145
Target Start/End: Original strand, 24739112 - 24739148
Alignment:
Q  109 aaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  24739112 aaaaatcccttttatataattgtatccaaacaaacta 24739148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 5e-37; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 19134915 - 19134770
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||         |||||||||| | ||||||||||||||||||||||||||    
T  19134915 taaaaacagcttcaaatgagaagctgttaagagcagcttctcaaaaaatagattttttgt-agaggagagagaaaatattgtttaaaagattgaactaat 19134817  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||| |||||||| |||||||||| |||||||||||||||||||    
T  19134816 tttgtaacaaaaaatcccttttatataattgtatccaaacaaactag 19134770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 1349814 - 1349666
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnn--agaggagagacataatattgtttaaaagattgaacta 97  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||           |||||||||| | |||||  |||||||||||||||||    
T  1349814 taaaaacagcttcaaatgagaagctgttaagagcagcttctcaaaaaatagatttttttttttagaggagagagaaaatatgatttaaaagattgaacta 1349715  T
Q  98 attttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  1349714 attttgtaacaaaaaatcccttttatatagttgtatccaaacaaactag 1349666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 145
Target Start/End: Complemental strand, 5246590 - 5246525
Alignment:
Q  80 gtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5246590 gtttaaaagattgaactaattttgtaaaaaaaaatctcttttatatagttgtatccaaacaaacta 5246525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 35039749 - 35039816
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactagga 148  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  35039749 tttaaaagattgaactaattttgtaacaaaaaatcccttttatatagttgtatccaaacaaactagga 35039816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 19135173 - 19135030
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    |||||| || || ||||||||||||||||||| |||||||| ||||| ||||         |||||||||| | ||||| ||||||||||||||||||||    
T  19135173 taaaaatagctttaaatgagaagctgttaagaacagcttctcaaaaaatagattttttat-agaggagagagaaaatatggtttaaaagattgaactaat 19135075  T
Q  100 tttgta--ataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    ||||||  | |||||||||||||||||||||||||||||||||||    
T  19135074 tttgtaacaaaaaaaatctcttttatatagttgtatccaaacaaa 19135030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 35781523 - 35781379
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||||||||||||||||||||||||||||| ||| | ||||| ||||         |||||||||| |  ||||  ||||||||||| |||||||    
T  35781523 taaaaacagtttcaaatgagaagctgttaagagcaacttatcaaaaaatagatttttttttagaggagagaaa--atatgatttaaaagattaaactaat 35781426  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||| ||||||| | |||||||||||||||||||||| ||||||    
T  35781425 tttgtaacaaaaaatatattttatatagttgtatccaaacgaactag 35781379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 35041067 - 35040995
Alignment:
Q  74 aatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||| |||||||||||||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||    
T  35041067 aatattttttaaaagattgaactaattttgtaacataaaatctcatttatatagttgtatcctaacaaactag 35040995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 20515228 - 20515371
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaatt 100  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| ||||         |||||||| | | ||||| | |  ||||||||||||||||    
T  20515228 taaaaacagttacaaatgagaagctgttaagagcagcttctcaaaaataga--tttttttagaggagaaagaaaatatggatctaaagattgaactaatt 20515325  T
Q  101 ttgtaataa-aaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||| || |||||| ||||||||||| ||| |||||||||||||    
T  20515326 ttgtaacaataaaatcgcttttatatagctgtttccaaacaaacta 20515371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 35040423 - 35040488
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaa-tctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  35040423 tttaaaagattgaactaattttgtaacaaaaaattcccttttatatagttgtatccaaacaaacta 35040488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 4727853 - 4727939
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaa-aaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||  ||||||||| |||||||||||||||| ||| ||||| ||||||||||||||||| ||||||||||||    
T  4727853 agaggagagagaaaatataatttaaaagaatgaactaattttgtaacaaacaaatcccttttatatagttgtattcaaacaaactag 4727939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 28794095 - 28794013
Alignment:
Q  63 aggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||| | ||||  ||||||||||||||| |||||||||||  ||||||| | |||||||||||||||||||||||||||    
T  28794095 aggagagaaaaaatacggtttaaaagattgaaataattttgtaacgaaaaatcccgtttatatagttgtatccaaacaaacta 28794013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 5249425 - 5249361
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||||||| ||||| |||||    
T  5249425 tttaaaagattgaactaattttgcaacaaaaaatcccttttatatagttgtattcaaactaacta 5249361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 25458523 - 25458607
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | ||||| | | ||||||||||||||||||||||| |||||||| |||||||||| |||||| ||| |||||||    
T  25458523 agaggagagagaaaatatggatcaaaagattgaactaattttgtaacaaaaaatcgcttttatataattgtattcaatcaaacta 25458607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 18585828 - 18585691
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaatt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||  | |         | |||||||  | ||||| |||||||||       |||||    
T  18585828 taaaaacagcttcaaatgagaagctgttaagagcagcttctaaaaaaaaaataaaaaattaaaggagaggtaaaatatggtttaaaag-------taatt 18585736  T
Q  101 ttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||    
T  18585735 ttgtaacaaaaaatcgtttttatatagttgtatccaaacaaacta 18585691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 38184364 - 38184303
Alignment:
Q  83 taaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  38184364 taaaagattgaagtaattttgtaacaaaaaatc-cttttatatagttgtacccaaacaaacta 38184303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 38213993 - 38214054
Alignment:
Q  83 taaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  38213993 taaaagattgaagtaattttgtaacaaaaaatc-cttttatatagttgtacccaaacaaacta 38214054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 43583045 - 43582986
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||| |||||||| |||||||||  ||||||||||||||||||    
T  43583045 aaaagattgaactaattttgtaacaaaaaatcccttttatat--ttgtatccaaacaaacta 43582986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 145
Target Start/End: Original strand, 2211246 - 2211327
Alignment:
Q  64 ggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| | ||||| |||||||| ||| || ||||||||||| |||||||||||||||||   ||||||||||||||||||    
T  2211246 ggagagagaaaatatggtttaaaatattaaattaattttgtaacaaaaaatctcttttataagtttgtatccaaacaaacta 2211327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 6429486 - 6429571
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaa-atctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | ||||| | | ||||||||||||||||||||||| ||||| |||  |||||||||||||||||| |||||||||    
T  6429486 agaggagagagaaaatatggatcaaaagattgaactaattttgtaacaaaaatatcgtttttatatagttgtatcctaacaaacta 6429571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 12545884 - 12545969
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaat-aaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | |||||  ||||||| |||||||||| |||||||| |||||||| ||||||||| |||| ||||||||||||||    
T  12545884 agaggagagagaaaatataatttaaaatattgaactaaatttgtaataaaaaaatcgcttttatatggttgaatccaaacaaacta 12545969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 34383474 - 34383394
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaa 141  Q
    |||||||||| | ||||  | ||||||||||||| | ||||||||| |||| ||| |||||||||||||||||||||||||    
T  34383474 agaggagagagaaaataaggcttaaaagattgaattgattttgtaacaaaatatcccttttatatagttgtatccaaacaa 34383394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 19950811 - 19950750
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||| ||||| |||||||||||||  |||||||||| ||||||| ||||||||||    
T  19950811 aaaagattgaaataattatgtaataaaaaataccttttatataattgtatctaaacaaacta 19950750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 40591406 - 40591326
Alignment:
Q  65 gagagacataatattgtttaaaagattgaactaattttgtaa-taaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||| | ||||| |||||||| |||| |||||||||||||  |||||||| |||||| ||||||||||||||||||||||    
T  40591406 gagagagaaaatatggtttaaaaaattgtactaattttgtaacaaaaaaatccctttta-atagttgtatccaaacaaacta 40591326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 35040230 - 35040166
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||||||| ||||||| |||||||  ||||||||| |||| ||||||||||||||    
T  35040230 tttaaaatattgaactaaatttgtaacaaaaaattccttttatatggttgaatccaaacaaacta 35040166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 145
Target Start/End: Complemental strand, 1349323 - 1349252
Alignment:
Q  74 aatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||| ||| |||||||| |||||||||||||  |||| || |||||||||||||| |||| ||||||||||    
T  1349323 aatatggttcaaaagattaaactaattttgtatcaaaacatttcttttatatagttatatctaaacaaacta 1349252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 145
Target Start/End: Original strand, 35781642 - 35781689
Alignment:
Q  98 attttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||||||    
T  35781642 attttgtaacaaaaaatcccttttatatagttgtatcaaaacaaacta 35781689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 38494570 - 38494508
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaa-tctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||| ||||| |||||||| |||||| || ||||||||||| |||||||||||||||||    
T  38494570 aaaagattaaactagttttgtaacaaaaaaatcccttttatatagatgtatccaaacaaacta 38494508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6537988 - 6538033
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    ||||||||| |||||||||||||||||||||| |||||||| ||||    
T  6537988 taaaaacagcttcaaatgagaagctgttaagaccagcttctcaaaa 6538033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 35781955 - 35781919
Alignment:
Q  110 aaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||| ||||||||||||||||||||||||||||||    
T  35781955 aaaatcacttttatatagttgtatccaaacaaactag 35781919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40591467 - 40591427
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct 41  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  40591467 taaaagcagcttcaaatgagaagctgttaagagcagcttct 40591427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 7293449 - 7293488
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttat 123  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  7293449 aaaagattaaactaattttataataaaaaatctcttttat 7293488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 22793327 - 22793373
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    ||||||||||| ||||||| |||||||||||||| ||||||| ||||    
T  22793327 taattttgtaacaaaaaatttcttttatatagttttatccaagcaaa 22793373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17367508 - 17367553
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    |||||| || ||||||||||||||||||||||| ||||||| ||||    
T  17367508 taaaaatagcttcaaatgagaagctgttaagagtagcttctcaaaa 17367553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 30054498 - 30054547
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||||||||| |||||| | ||||||||||||| ||||||    
T  30054498 taattttataataaaaaatcacttttagaaagttgtatccaaataaacta 30054547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 8708175 - 8708032
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||         |||||||||| | |||||  |||||||||||||||||||    
T  8708175 taaaaacagcttcaaatgagaagctgttaagagcagcttctcaaaaaatagatttttttttagaggagagagaaaatatgatttaaaagattgaactaat 8708076  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaac 143  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||||    
T  8708075 tttgtaacaaaaaatttcttttatatagttgtatcaaaacaaac 8708032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 9060062 - 9059919
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||         |||||||||| | |||||  |||||||||||||||||||    
T  9060062 taaaaacagcttcaaatgagaagctgttaagagcagcttctcaaaaaatagatttttttttagaggagagagaaaatatgatttaaaagattgaactaat 9059963  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaac 143  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||||    
T  9059962 tttgtaacaaaaaatttcttttatatagttgtatcaaaacaaac 9059919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 11633218 - 11633075
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||||         |||||||||| |  ||||  |||||||||||||||||||    
T  11633218 taaaaacagcttcaaatgaaaagttgttaagagcagcttctcaaaaaatagatttttttt-agaggagagaaa--atatgatttaaaagattgaactaat 11633122  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  11633121 tttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 11633075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 10333197 - 10333112
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||    
T  10333197 agaggagagagaaaatattgtttaaaagattgaactaattttgtaacaaaaaatcccttttatatagttgtatctaaacaaactag 10333112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 21388411 - 21388496
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | ||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  21388411 agaggagagagaaaatattgtttaaaagattgaactaattttataacaaaaaatcccttttatatagttgtatccaaacaaactag 21388496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 10297568 - 10297425
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||||||||||||||||||||||||| |||| |||| ||||| ||||         ||||| |||| | ||||| |||| ||| |||||||||||    
T  10297568 taaaaacagtttcaaatgagaagctgttaagtgcagtttctcaaaaaatagatttattt--agaggtgagagaaaatatggttttaaaaattgaactaat 10297471  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  10297470 tttgtaacaaaaaatctcttttatatatttgtatcaaaacaaacta 10297425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 12101157 - 12101076
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    |||| ||||| | ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  12101157 agagaagagagaaaatattgtttaaaagattgaactaattttgtaacaaaacatctcttttatatagttatatccaaacaaa 12101076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 54982033 - 54981898
Alignment:
Q  11 ttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaattttgtaataa 109  Q
    ||||||||||||||||||||||||||||||| ||||| || |         |||||||||| | |||||  |||||||||||||||||||||||||| ||    
T  54982033 ttcaaatgagaagctgttaagagcagcttctcaaaaaata-aattttttttagaggagagagaaaatatattttaaaagattgaactaattttgtaacaa 54981935  T
Q  110 aaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||  ||||||||||||||||| |||||||||||    
T  54981934 aaaatccgttttatatagttgtatcaaaacaaactag 54981898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 47567567 - 47567709
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaat--tagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaa 98  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||   ||||         |||||||||| | ||||||| |||||||||||||||||    
T  47567567 taaaaacagcttcaaatgaaaagttgttaagagcagcttctaaaaaaaatagatttttttt-agaggagagagaaaatattgcttaaaagattgaactaa 47567665  T
Q  99 ttttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
     ||||||| |||||||| |||||||||||| |||||||||||||    
T  47567666 ctttgtaacaaaaaatcccttttatatagtagtatccaaacaaa 47567709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 54356365 - 54356281
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | |||||  |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  54356365 agaggagagagaaaatatgatttaaaagattgaactaattttgtaacaaaaaatcccttttatatagttatatccaaacaaacta 54356281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 46515182 - 46515037
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||| | ||||||||||||| |||||||| |||||||| ||||| ||||         |||||||||| | ||||| |||||||| |||||||||||    
T  46515182 taaaaaccgcttcaaatgagaagttgttaagaacagcttctcaaaaaatagatatttttttagaggagagagaaaatatggtttaaaatattgaactaat 46515083  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||  |||||||||||||||||| ||||||||  |||||||||    
T  46515082 tttgtatcaaaaaatctcttttatattgttgtatctgaacaaacta 46515037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 24842413 - 24842556
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| ||||||||||||| ||||||||||| ||||| ||||| ||||         ||||||| || | |||||  ||||||| |||||||||||    
T  24842413 taaaaacagcttcaaatgagaagttgttaagagcatcttctcaaaaaatagatttttttt-agaggagggagaaaatatgatttaaaatattgaactaat 24842511  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||    
T  24842512 tttgtaacaaaaaa-ctcttttatatagttgtatccaaacaaacta 24842556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 54143089 - 54143004
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||||||||||| |||||||||||||||||| ||||||||  ||||||||||| |||||||||| ||||||    
T  54143089 agaggagagagaaaatattgtttaaaaaattgaactaattttgtaacaaaaaatccattttatatagtcgtatccaaactaactag 54143004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 33832873 - 33832810
Alignment:
Q  82 ttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  33832873 ttaaaagattgaattaattttgtgacaaaaaatctcttttatatagttgtatccaaacaaacta 33832810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 3942589 - 3942654
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  3942589 tttaaaggattgaactaattttgtaacaaaaaatcccttttatatagttgtattcaaacaaactag 3942654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 26167898 - 26167965
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaa---aatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||||||    
T  26167898 tttaaaagattgaactaattttgtaacaaaaaaaaatctcttttatatagttgtatccaaacaaacta 26167965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 45586196 - 45586112
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||  | ||||| ||| ||||||||||||||||||||||| ||||||| |||||||||| ||||||| |||||||||||    
T  45586196 agaggagagtgaaaatatggttcaaaagattgaactaattttgtaacaaaaaatatcttttatattgttgtattcaaacaaacta 45586112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 10332676 - 10332758
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaact 144  Q
    |||||||||| | |||||| ||| ||| |||||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  10332676 agaggagagagaaaatattattttaaacattgaactaattttgtaacaaaaa-tcccttttatatagttgtatccaaacaaact 10332758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 24485606 - 24485669
Alignment:
Q  82 ttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||||| |||||||| |||||| || ||||||||||||||||||||||||||||    
T  24485606 ttaaaagattgaactagttttgtaacaaaaaacctattttatatagttgtatccaaacaaacta 24485669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 10317386 - 10317246
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttcta-aaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    |||||| |||||||||||||||||||||||| |||||||||| |||| ||||         ||||| |||| | ||||| |||| ||| |||||||||||    
T  10317386 taaaaatagtttcaaatgagaagctgttaagtgcagcttctagaaaaatagatttattt--agaggtgagagaaaatatggttttaaaaattgaactaat 10317289  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    |||||||  ||||||||||||| |||| ||||||| |||||||    
T  10317288 tttgtaacgaaaaatctcttttttatatttgtatcaaaacaaa 10317246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 42583670 - 42583605
Alignment:
Q  81 tttaaaagattgaactaattttg-taataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||||||||||| |||||||||||    
T  42583670 tttaaaagattgaactaatttttataacaaaaaatctcttttatatagttgtattcaaacaaacta 42583605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 26760661 - 26760577
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | ||||| |||||||||| |||| ||||||| ||| |||| || |||||||||||||||||| |||||||||||    
T  26760661 agaggagagaaaaaatatggtttaaaagaatgaattaattttttaacaaaatatttcttttatatagttgtattcaaacaaacta 26760577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 30498429 - 30498513
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | ||||| | | |||| |||||||||||||| ||| | ||||||||||||||||||||||||| ||||||||||    
T  30498429 agaggagagagaaaatatagatcaaaatattgaactaattttataacagaaaatctcttttatatagttgtatcaaaacaaacta 30498513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 10297198 - 10297283
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttt--tatatagttgtatccaaacaaacta 145  Q
    |||||||||| | |||||| ||||||||||||||||||||||||||  | ||||| ||||  |||||||||||||||||||||||||    
T  10297198 agaggagagagaaaatattatttaaaagattgaactaattttgtaa-cagaaatcccttttatatatagttgtatccaaacaaacta 10297283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 146
Target Start/End: Original strand, 40285036 - 40285119
Alignment:
Q  63 aggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||| | |||||  ||||||| |||||| ||||||||||| |||||||  |||||||||||||||||||||| |||||||    
T  40285036 aggagagagaaaatatgatttaaaatattgaattaattttgtaacaaaaaattccttttatatagttgtatccaaataaactag 40285119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 7433611 - 7433676
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||||||| |||||||||||||| |||||||   |||||||||||||||||||||||| ||||    
T  7433611 tttaaaagattaaactaattttgtaacaaaaaattcattttatatagttgtatccaaacaagctag 7433676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 44077811 - 44077878
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctc--ttttatatagttgtatccaaacaaactag 146  Q
    |||||||||||||||||||||||||| ||||||  |   |||||||||||||||||||||||||||||    
T  44077811 tttaaaagattgaactaattttgtaacaaaaaaaatacattttatatagttgtatccaaacaaactag 44077878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 54981617 - 54981681
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||| ||| |||||||  ||||||||| ||||||| ||||||||||    
T  54981617 tttaaaagattgaactaattttgcaatgaaaaatcatttttatataattgtatcaaaacaaacta 54981681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 54585851 - 54585909
Alignment:
Q  88 gattgaactaattttgtaataaaaaa-tctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||| |||||| || ||||||||||| |||||||||||||||||    
T  54585851 gattgaactaattttgtaacaaaaaaatcgcttttatatagctgtatccaaacaaacta 54585909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 3781422 - 3781485
Alignment:
Q  84 aaaagattgaactaatt---ttgtaataaaaaatctcttttatatagttgtatccaaacaaact 144  Q
    |||||||||||||||||   |||||| |||||||| ||||||||||||||| ||||||||||||    
T  3781422 aaaagattgaactaattattttgtaacaaaaaatcacttttatatagttgtttccaaacaaact 3781485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 3821426 - 3821489
Alignment:
Q  84 aaaagattgaactaatt---ttgtaataaaaaatctcttttatatagttgtatccaaacaaact 144  Q
    |||||||||||||||||   |||||| ||||| || ||||||||||||||||||||||||||||    
T  3821426 aaaagattgaactaattattttgtaacaaaaattcacttttatatagttgtatccaaacaaact 3821489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10334342 - 10334297
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  10334342 taaaaacagcttcaaatgagaagctgttaagagcagcttctcaaaa 10334297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 34794401 - 34794536
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| ||||||||||||  | ||||||||||||||| ||||| ||||         |||||||||| | |||||| |||||||||||||||| ||    
T  34794401 taaaaacagcttcaaatgagaaaatattaagagcagcttctcaaaaaatagatttttttt-agaggagagagaaaatattttttaaaagattgaactcat 34794499  T
Q  100 tttgt--aataaaaaatctcttttatatagttgtatc 134  Q
     ||||  || |||||||||||||| ||||||||||||    
T  34794500 cttgtaaaaaaaaaaatctcttttgtatagttgtatc 34794536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 13208038 - 13207895
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaatt 100  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||  | |         |||||||||| |  |||| ||| |||||| ||||||||||    
T  13208038 taaaaacagtttcaaatgagaagctgttcagagca-cttctaaaaa-caaatatttttttagaggagagaaaatatatggttcaaaagaatgaactaatt 13207941  T
Q  101 ttgtaataaa--aaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||| |||  ||||||  ||||||||||| |||||||||||||||    
T  13207940 ttgtaacaaaccaaatct-atttatatagttttatccaaacaaacta 13207895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 21459690 - 21459626
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||| |||||||||||||| |||||||  |||||||||||||||| | | ||||||||    
T  21459690 tttaaaagattaaactaattttgtaacaaaaaattccttttatatagttgtacctacacaaacta 21459626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 142
Target Start/End: Original strand, 47567774 - 47567830
Alignment:
Q  86 aagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    |||||| |||||| ||||||| |||||||| |||||||||||| |||||||||||||    
T  47567774 aagattaaactaactttgtaacaaaaaatcccttttatatagtagtatccaaacaaa 47567830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 7335551 - 7335585
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagca 35  Q
    |||||||||||||||||||||||||||||||||||    
T  7335551 taaaaacagtttcaaatgagaagctgttaagagca 7335585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 14900369 - 14900411
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaa 138  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  14900369 taattttgtaataaaaaaattcttttatatagttgtatccaaa 14900411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 53877735 - 53877653
Alignment:
Q  63 aggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||| | |||||  |||||||||||||||| |||||| || ||| |||| ||||||||||||| |||| ||| ||||||    
T  53877735 aggagagagaaaatatgatttaaaagattgaactgattttgcaacaaataatcccttttatatagttatatctaaataaacta 53877653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 3789791 - 3789742
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||| |||||||  |||||||||| ||||||||||||||||||    
T  3789791 taattttgtaacaaaaaataacttttatataattgtatccaaacaaacta 3789742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 10317036 - 10317100
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatata 126  Q
    |||||||||| | |||||| ||||||||||| ||||||||||||||  ||||||| ||||||||||    
T  10317036 agaggagagagaaaatattatttaaaagattaaactaattttgtaa-caaaaatcccttttatata 10317100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 44868984 - 44869033
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||||||||| |||||| | ||||||||||||||||||||    
T  44868984 taattttataataaaaaatcacttttagaaagttgtatccaaacaaacta 44869033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 2788463 - 2788523
Alignment:
Q  82 ttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    ||||||||| ||  |||||||| || |||||||| |||||| |||||||||||||||||||    
T  2788463 ttaaaagatggagataattttgaaacaaaaaatcacttttacatagttgtatccaaacaaa 2788523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3942506 - 3942546
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct 41  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  3942506 taaaaacagcttcaaatgaaaagctgttaagagcagcttct 3942546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12040099 - 12040137
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagctt 39  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  12040099 taaaaacagcttcaaatgagaagctgttatgagcagctt 12040137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23027521 - 23027626
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||  || ||||||||| |||||||||||||||||| ||||| ||||         |||||||||| | |||||  |||||||||||||||||||    
T  23027521 taaaaacaactttaaatgagaaactgttaagagcagcttctcaaaaaatagattttcttt-agaggagagagaaaatatgatttaaaagattgaactaat 23027619  T
Q  100 tttgtaa 106  Q
    |||||||    
T  23027620 tttgtaa 23027626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 3789579 - 3789628
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtat 133  Q
    ||||||||||  ||||||||||| ||||||| | ||||||||||||||||    
T  3789579 aaaagattgaggtaattttgtaacaaaaaatttattttatatagttgtat 3789628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 3827304 - 3827353
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtat 133  Q
    ||||||||||  ||||||||||| ||||||| | ||||||||||||||||    
T  3827304 aaaagattgaggtaattttgtaacaaaaaatttattttatatagttgtat 3827353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 23027837 - 23027788
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||||||||| |||||| | ||||||||||||| ||||||    
T  23027837 taattttataataaaaaatcacttttagaaagttgtatccaaaaaaacta 23027788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 55158104 - 55158165
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||| ||| ||| |||   |||||||| |||||||||||| ||||||    
T  55158104 aaaagattgaactaattttataacaaataattcattttatattgttgtatccaaataaacta 55158165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40459754 - 40459714
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct 41  Q
    ||||||||||||| ||||||||| ||||||||||| |||||    
T  40459754 taaaaacagtttcgaatgagaagttgttaagagcaacttct 40459714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 42845433 - 42845465
Alignment:
Q  111 aaatctcttttatatagttgtatccaaacaaac 143  Q
    |||||||||||||||||||||| ||||||||||    
T  42845433 aaatctcttttatatagttgtacccaaacaaac 42845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 54585765 - 54585805
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct 41  Q
    ||||||||| ||| |||||||||||||| ||||||||||||    
T  54585765 taaaaacagcttcgaatgagaagctgttgagagcagcttct 54585805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 42676622 - 42676476
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| ||||||||||||||||| ||||||||||||| ||||| ||||         |||||| ||| | |||||  |||||||||||||||||||    
T  42676622 taaaaacagcttcaaatgagaagctgtcaagagcagcttctcaaaaaatagatttttttttagaggatagagaaaatatgatttaaaagattgaactaat 42676523  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  42676522 tttgtaacaaaaaatcccttttatatagttgtatgcaaacaaactag 42676476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 14787357 - 14787216
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| || |||||||||||||||||||||| ||||| ||||| ||||         |||||||||| | ||||||||||||||||||||| ||||    
T  14787357 taaaaacagctttaaatgagaagctgttaagagcaacttctcaaaaaatagatttttttt-agaggagagagaaaatattgtttaaaagattgaattaat 14787259  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    ||||||| ||||||||||||||| |||||||||||||||||||    
T  14787258 tttgtaacaaaaaatctcttttagatagttgtatccaaacaaa 14787216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 7495679 - 7495595
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  7495679 agaggagagaga-aatattgtttaaaagattgaacaaattttgtaacaaaaaatcccttttatatagttgtatccaaacaaactag 7495595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 39844209 - 39844294
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||||||||| |||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  39844209 agaggagagagaaaatattgtttaatagattgaactaattttgtaacagaaaatcccttttatatagttgtatccaaacaaactag 39844294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 30632279 - 30632214
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30632279 tttaaaagattgaattaattttgtaacaaaaaatctcttttatatagttgtatccaaacaaactag 30632214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 40662747 - 40662831
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | |||||  ||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  40662747 agaggagagagaaaatatgatttaaaaaattgaactaattttgtaacaaaaaatcccttttatatagttgtatccaaacaaacta 40662831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 43968226 - 43968289
Alignment:
Q  82 ttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  43968226 ttaaaagattgaactaattttgtaacaaaaaatctcttttatatcgttgtatccaaacaaacta 43968289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 3256260 - 3256114
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||         | |||||||| | |||||  ||||||||||||||| |||    
T  3256260 taaaaacagcttcaaatgagaagctgttaagagcagcttcttaaaaaatagatttttttt-ataggagagagaaaatatgatttaaaagattgaaccaat 3256162  T
Q  100 tttgtaataaaaaa--tctcttttatatagttgtatccaaacaaacta 145  Q
    ||| ||| ||||||  |||||||||||||||||||| |||||||||||    
T  3256161 tttttaacaaaaaaaatctcttttatatagttgtatacaaacaaacta 3256114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21479561 - 21479417
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| |||||||||||||||||||||| |||||||| ||||| ||||         |||||||||| |  |||||  |||||| |||||||||||    
T  21479561 taaaaacagcttcaaatgagaagctgttaagaccagcttctcaaaaaatagatttttttt-agaggagagagaatatatt--ttaaaaaattgaactaat 21479465  T
Q  100 tttgtaat-aaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||||    
T  21479464 tttgtaacgaaaaaatcccttttatatagttgtatccaaacaaactag 21479417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 30668940 - 30668855
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||  |||||||||||||||||||||||||| ||||||||   |||||||| |||||||||||||||||||    
T  30668940 agaggagagagaaaatatgatttaaaagattgaactaattttgtaacaaaaaatcatgtttatataattgtatccaaacaaactag 30668855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 43968576 - 43968641
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || |||||    
T  43968576 tttaaaagattgaactaattttgtaacaaaaaatcccttttatatagttgtatccaagcacactag 43968641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 36950338 - 36950410
Alignment:
Q  74 aatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||||||| ||| |||||||||||||| ||||||||  ||||||||||||| |||||||||||||||    
T  36950338 aatattgtttaaaaaattaaactaattttgtaacaaaaaatccattttatatagttgaatccaaacaaactag 36950410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 20612788 - 20612705
Alignment:
Q  63 aggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||| | ||||| |||||||||||| ||||||||||| || |||||||| |||||||||||||||||| ||| |||||||    
T  20612788 aggagagaaaaaatatggtttaaaagattaaactaattttgaaacaaaaaatcccttttatatagttgtatctaaataaactag 20612705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 38722914 - 38722859
Alignment:
Q  90 ttgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  38722914 ttgaactaattttgtaataaaaaatctattttatatagttgtattcaaacaaacta 38722859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 15459014 - 15458960
Alignment:
Q  89 attgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaac 143  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  15459014 attgaactaattttgtaacaaaaaatcacttttatatagttgtatccaaacaaac 15458960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 30666417 - 30666272
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||| | |||||||||||||||||||| |||||||||| ||||| || |         ||| |||||| | |||||  ||||||||||||||| |||    
T  30666417 taaaaactgcttcaaatgagaagctgttaaaagcagcttctcaaaaaatatatttttttt-agatgagagagaaaatatgatttaaaagattgaacaaat 30666319  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||| |||||||| |||||||||| |||||| ||||||||||||    
T  30666318 tttgtaacaaaaaatcccttttatatatttgtattcaaacaaactag 30666272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 1826828 - 1826771
Alignment:
Q  85 aaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    ||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||    
T  1826828 aaagattgaactaattttgtaataaaaaatcgcttttatatagctggatccaaacaaa 1826771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 3197064 - 3197003
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||| |||||||| ||||||||||| |||||| ||||||||||    
T  3197064 aaaagattgaactaattttgtaacaaaaaatcacttttatatagctgtatcaaaacaaacta 3197003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 30620649 - 30620564
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||  | ||||||||||||||||||||||||  |||||||  ||||||||||||||||| |||||||||||    
T  30620649 agaggagagagaaaatatgatataaaagattgaactaattttgtaaccaaaaatcatttttatatagttgtatcgaaacaaactag 30620564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 30623270 - 30623185
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||  | ||||||||||||||||||||||||  |||||||  ||||||||||||||||| |||||||||||    
T  30623270 agaggagagagaaaatatgatataaaagattgaactaattttgtaaccaaaaatcatttttatatagttgtatcgaaacaaactag 30623185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 42679359 - 42679501
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||  ||||||||| ||||||||||||||| ||||| ||||| ||||         |||||||||| | ||||||||| | || |||||||||||    
T  42679359 taaaaacaacttcaaatgaaaagctgttaagagcatcttctcaaaaaatagattttttttaagaggagagagaaaatattgttcacaatattgaactaat 42679458  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||| ||    | | |||||||||||||||||||||||||||||    
T  42679459 tttgtaacaa----ttttttttatatagttgtatccaaacaaactag 42679501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 21479275 - 21479220
Alignment:
Q  91 tgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||||||||| |||||||  ||||||| ||||||||||||||||||||||    
T  21479275 tgaactaattttgtaacaaaaaatgccttttatgtagttgtatccaaacaaactag 21479220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 34454226 - 34454176
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  34454226 taattttgtaagaaaaaatcgcttttatatagatgtatccaaacaaactag 34454176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 43004974 - 43004906
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaat--ctctttta--tatagttgtatccaaacaaacta 145  Q
    |||||||||||||||||||||||||| |||||||  ||||| ||  |||||||||||||||||||||||    
T  43004974 tttaaaagattgaactaattttgtaacaaaaaatgcctcttatagttatagttgtatccaaacaaacta 43004906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 142
Target Start/End: Complemental strand, 9420341 - 9420272
Alignment:
Q  74 aatattgtttaaaagattgaactaattttgtaataaaaaa-tctcttttatatagttgtatccaaacaaa 142  Q
    ||||| |||||||| ||| |||||||||||||| |||||| ||  |||||||||||||||||||||||||    
T  9420341 aatatggtttaaaatattaaactaattttgtaacaaaaaaatccattttatatagttgtatccaaacaaa 9420272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 38722991 - 38722946
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  38722991 taaaaacagtttcaaatgagaagctgttaagagctgcttctcaaaa 38722946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 45655004 - 45654955
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtat 133  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  45655004 aaaaaattgaactaattttgtaacaaaaaatctcatttatatagttgtat 45654955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 7074908 - 7074972
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| ||| |||||||||||||  ||||||||  |||||||||||||||||| |||||||||    
T  7074908 tttaaaaaatttaactaattttgtatcaaaaaatcatttttatatagttgtatcctaacaaacta 7074972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34453825 - 34453870
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    |||||||||||| |||||||||| ||||||||||||||||| ||||    
T  34453825 taaaaacagttttaaatgagaagttgttaagagcagcttctcaaaa 34453870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 559575 - 559531
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaaca 140  Q
    ||||||||| | ||||||||| |||||||||||||||||||||||    
T  559575 taattttgttaaaaaaaatctattttatatagttgtatccaaaca 559531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 18296908 - 18296969
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||||||||| ||||||||| ||||||  ||  |||||||| ||||||||||||||||||    
T  18296908 aaaagattgaactgattttgtaacaaaaaaa-tcgcttatatagctgtatccaaacaaactag 18296969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 41145160 - 41145111
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||||||||| |||||| | | ||||||||||||||||||    
T  41145160 taattttataataaaaaatcacttttaaaaaattgtatccaaacaaacta 41145111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7074829 - 7074869
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct 41  Q
    ||||||||| ||||||||||||||| || ||||||||||||    
T  7074829 taaaaacagcttcaaatgagaagctcttgagagcagcttct 7074869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 9093403 - 9093359
Alignment:
Q  99 ttttgtaataaaaaatctcttttatatagttgtatccaaacaaac 143  Q
    |||| ||||||||||||||||||||||| ||||||  ||||||||    
T  9093403 ttttataataaaaaatctcttttatataattgtatataaacaaac 9093359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 205400 - 205256
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||  |||||||||||||| |||||||||||||||| ||||| ||||         |||||||||| | ||||||||||||||||||||||||||    
T  205400 taaaaacaacttcaaatgagaagccgttaagagcagcttctcaaaaaatagatttttttt-agaggagagagaaaatattgtttaaaagattgaactaat 205302  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  205301 tttgtaacaaaaaat-tcttttatatagttgtatctaaacaaactag 205256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 106010 - 106151
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||  |||||||||||||||||||||| || ||||| ||||| ||||         |||||||||| | |||||  |||||||||||||||||||    
T  106010 taaaaacaacttcaaatgagaagctgttaagaacaccttctcaaaaaatagatttttgt--agaggagagagaaaatatgatttaaaagattgaactaat 106107  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaac 143  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||    
T  106108 tttgtaacaaaaaatcctttttatatagttgtatccaaacaaac 106151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 7e-30; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 38320098 - 38319954
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaatt 100  Q
    ||||||||  |||||||||||||||||||| ||||||||||||||   | |         |||||||| | | ||||| |||||||||||||||||||||    
T  38320098 taaaaacaacttcaaatgagaagctgttaatagcagcttctaaaaca-ataaattattttagaggagatagaaaatatggtttaaaagattgaactaatt 38320000  T
Q  101 ttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  38319999 ttgtaacaaaaaatctcttttatatagttgtatccaaacaaactag 38319954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 146
Target Start/End: Original strand, 24162188 - 24162257
Alignment:
Q  77 attgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||    
T  24162188 attgtttaaaagattgaactaattttgtaacaaaaaatctcttttatatagatgcatccaaacaaactag 24162257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 5800980 - 5801126
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||||| || |         |||||||||  | ||||   ||||||| |||||||||||    
T  5800980 taaaaacagcttcaaatgagaagctgttaagagtagcttctcaaaaaatatatttttttttagaggagaggaaaaatacaatttaaaatattgaactaat 5801079  T
Q  100 tttgtaataaaa-aatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||    
T  5801080 tttgtaacaaaaaaatctcttttatatagttgtatccaaacaaacta 5801126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 24689423 - 24689349
Alignment:
Q  74 aatattgtttaaaagattgaactaattttgtaataaaaaa--tctcttttatatagttgtatccaaacaaactag 146  Q
    |||||| |||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  24689423 aatattatttaaaagattgaactaattttgtaacaaaaaaaatctcttttatatagttgtatccaaacaaactag 24689349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 26246564 - 26246706
Alignment:
Q  1 taaaaacagtttcaaatgagaagc-tgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaa 98  Q
    ||||||||| |||||||||||||| ||||||||| ||||||| ||||| ||||         |||||||||| | ||||  |||||||||||| ||||||    
T  26246564 taaaaacagcttcaaatgagaagcctgttaagagaagcttctcaaaaaatagatttttttt-agaggagagagaaaatagggtttaaaagattaaactaa 26246662  T
Q  99 ttttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    |||||||| ||||||||||||||||| |||||||||||||||||    
T  26246663 ttttgtaacaaaaaatctcttttataaagttgtatccaaacaaa 26246706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 26970876 - 26970732
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaatt 100  Q
    ||||||||| ||||||||||||||||||| |||||| |||| ||||  | |         |||||||||| | |||||||||||||||||||||||||||    
T  26970876 taaaaacagcttcaaatgagaagctgttaggagcagattctcaaaaa-atatatttttttagaggagagagaaaatattgtttaaaagattgaactaatt 26970778  T
Q  101 ttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||| ||||| || |||||||||| |||||||||  ||||||||    
T  26970777 ttgtaacaaaaagtcccttttatataattgtatccatgcaaactag 26970732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 30121366 - 30121280
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactagg 147  Q
    |||||||||| | |||||  |||||||||||||||||||||||||| |||||||  ||||||||||||||||| |||||||||||||    
T  30121366 agaggagagagaaaatataatttaaaagattgaactaattttgtaacaaaaaattccttttatatagttgtattcaaacaaactagg 30121280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 23640754 - 23640835
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    |||||||||| | ||||| | ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  23640754 agaggagagagaaaatatagattaaaagattgaactaattttgtaaaaaaaaatctcttttatagagttgtatccaaccaaa 23640835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 24689064 - 24689206
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaa-aattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||||||||||||||||||||||||||||||||||| || || ||||         | |||||| | | ||||| ||| ||||||||||||||||    
T  24689064 taaaaacagtttcaaatgagaagctgttaagagcagcttctcaagaaatagatttttta--aaaggagaaataaaatatggttgaaaagattgaactaat 24689161  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||| ||||||||| |||||||||||| ||||||||||    
T  24689162 tttgtaacaaaa-atctcttttgtatagttgtatcaaaacaaacta 24689206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 142
Target Start/End: Original strand, 47222539 - 47222618
Alignment:
Q  64 ggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctc-ttttatatagttgtatccaaacaaa 142  Q
    ||||||| | ||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||    
T  47222539 ggagagagaaaatatggtttaaaagattgaactaattttgtaacaaaaaatctctttttatatagttatatccaaacaaa 47222618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 35526635 - 35526488
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||||| ||||         ||||||| || | |||||  ||||||||||| |||||||    
T  35526635 taaaaacagcttcaaatgagaagctgttaaaagcagcttctcaaaaaatagatttttttt-agaggagcgagaaaatataatttaaaagattaaactaat 35526537  T
Q  100 tttgtaataaaaaa---tctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| ||||||   || |||||||||||||||||||||||||||||    
T  35526536 tttgtaacaaaaaaaaatcccttttatatagttgtatccaaacaaacta 35526488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 21696543 - 21696483
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  21696543 aaaagattgaactaattttgtaacaaaaaatc-cttttatatagttgtatccaaacaaacta 21696483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 17 - 145
Target Start/End: Original strand, 30121871 - 30121999
Alignment:
Q  17 tgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatc 115  Q
    ||||||||||||||||||||||||| ||||| ||||         ||||||| || | ||||| | ||||||||||||||||||||||||| |||||||     
T  30121871 tgagaagctgttaagagcagcttctcaaaaaatagatttttttt-agaggagggagaaaatatggattaaaagattgaactaattttgtaacaaaaaatt 30121969  T
Q  116 tcttttatatagttgtatccaaacaaacta 145  Q
      ||||||||||||||||||||||||||||    
T  30121970 ctttttatatagttgtatccaaacaaacta 30121999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 46898015 - 46897950
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||||||||||||||    
T  46898015 tttaaaagattgaactaattttgtaacaaaaaatcccttttatctagttatatccaaacaaactag 46897950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 10283298 - 10283382
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||   ||||| ||||||| ||||||||||||||||||| |||||||| ||||||||||| |||||| ||||||||||    
T  10283298 agaggagagaggaaatatggtttaaacgattgaactaattttgtaacaaaaaatcccttttatatagctgtatcgaaacaaacta 10283382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 24688785 - 24688869
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | ||||| |||||||||||||||||||||| |||| ||||||||  |||||||||||||||| | |||||||||    
T  24688785 agaggagagagaaaatatggtttaaaagattgaactaatttggtaacaaaaaatcatttttatatagttgtattcgaacaaacta 24688869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 26970413 - 26970497
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | |||||  ||||||| |||||||||||||||||| ||||||||  ||| ||||||||||||||||||||||||    
T  26970413 agaggagagataaaatatgatttaaaacattgaactaattttgtaacaaaaaatcattttcatatagttgtatccaaacaaacta 26970497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 4399816 - 4399670
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| |||||||||||||||||| |||||||||||| ||||| |||          ||| || ||| | ||||| | || |||||||||||||||    
T  4399816 taaaaacagattcaaatgagaagctgttgagagcagcttctcaaaaaatagttttttttttagatgatagagaaaatatggatttaaagattgaactaat 4399717  T
Q  100 tttgtaataaaaaatct-cttttatatagttgtatccaaacaaacta 145  Q
    ||||||| ||||||  | |||||||||||||||||||||||||||||    
T  4399716 tttgtaaaaaaaaaattgcttttatatagttgtatccaaacaaacta 4399670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 21696803 - 21696863
Alignment:
Q  74 aatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatc 134  Q
    ||||| |||||||||||||  |||||||||||| |||||||||||||||||||||||||||    
T  21696803 aatatggtttaaaagattgttctaattttgtaacaaaaaatctcttttatatagttgtatc 21696863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 29854772 - 29854700
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtat 133  Q
    |||||||||| | ||||| ||| |||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  29854772 agaggagagagaaaatatggttcaaaatattgaactaattttgtaacgaaaaatctcttttatatagttgtat 29854700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 40261984 - 40261920
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||||||||||||||| |||||| |  ||||||||||||||||||||||||||||    
T  40261984 tttaaaatattgaactaattttgtaacaaaaaaccctttttatatagttgtatccaaacaaacta 40261920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 33858017 - 33858076
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaac 143  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  33858017 aaaagattaaactaattttttaacaaaaaatctcttttatatagttgtatccaaataaac 33858076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 14312398 - 14312538
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| |||||||||||| ||||||||| || ||||| ||||| ||||         |||||||||| | ||||  ||||||||||||||||| ||    
T  14312398 taaaaacagcttcaaatgagaatctgttaagaacatcttcttaaaaaatagattttttt--agaggagagagaaaatagagtttaaaagattgaacttat 14312495  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
     |||||| ||||||||  ||||||||||||||||| |||||||    
T  14312496 attgtaacaaaaaatcctttttatatagttgtatctaaacaaa 14312538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Original strand, 26151189 - 26151243
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaa 138  Q
    |||||||||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  26151189 aaaagattgaactaatttagtaacaaaaaatctcttttatatagatgtatccaaa 26151243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 44434700 - 44434764
Alignment:
Q  82 ttaaaagattgaactaattttgtaataaaaa-atctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||| || |||||||  ||||| |||||||||||||||||||||||||||||||||    
T  44434700 ttaaaagattgaaatagttttgtatcaaaaatatctcttttatatagttgtatccaaacaaacta 44434764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 45447587 - 45447661
Alignment:
Q  74 aatattgtttaaaagattgaactaattttgtaataaaa---aatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||| |||| ||| |||||||||||||||||| ||||   |||||||||||| |||||||||||||||||||||    
T  45447587 aatatggttttaaaaattgaactaattttgtaaaaaaaaaaaatctcttttatttagttgtatccaaacaaacta 45447661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 10282501 - 10282563
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||| |||||||||||||||| | |||||||  |||||||||||| |||||||||||||||||    
T  10282501 aaaatattgaactaattttgttacaaaaaataccttttatatagtagtatccaaacaaactag 10282563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 11750112 - 11750050
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||||||| ||||||||||||||||||    ||||||||||||||||||||| |||||||    
T  11750112 aaaagattgaagtaattttgtaataaaaaaatcattttatatagttgtatccaaataaactag 11750050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 10282700 - 10282761
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||| |||||||| ||| |||||||||||  ||| |||||||||||||||||    
T  10282700 aaaagattgaactagttttgtaacaaacaatctcttttacgtagatgtatccaaacaaacta 10282761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 35525990 - 35525915
Alignment:
Q  74 aatattgtttaaaagattgaactaattttgtaataaa---aaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||| |||||||||||||||||||||||||||| |||   ||||   |||| ||||||||||||||||||||||||    
T  35525990 aatagtgtttaaaagattgaactaattttgtaacaaaaacaaattcattttgtatagttgtatccaaacaaactag 35525915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 4594469 - 4594541
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtat 133  Q
    |||||||| | | ||||| |||||||||||||||||||||| |||| |||||||   ||||||||||||||||    
T  4594469 agaggagaaagaaaatatggtttaaaagattgaactaatttagtaacaaaaaatagattttatatagttgtat 4594541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 30122252 - 30122189
Alignment:
Q  82 ttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||| || ||||||| |||||||  |||||||||||| | ||||||||||||||    
T  30122252 ttaaaagattgaaccaactttgtaacaaaaaattccttttatatagtagaatccaaacaaacta 30122189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 1644605 - 1644543
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||| |||||||||||||||||| |||||||| |  ||||||||||||||  |||||||||||    
T  1644605 aaaatattgaactaattttgtaacaaaaaatcccaattatatagttgtattaaaacaaactag 1644543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 18984714 - 18984760
Alignment:
Q  99 ttttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||    
T  18984714 ttttgtaacgaaaaatgtcttttatatagttgtatccaaacaaacta 18984760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 18989529 - 18989575
Alignment:
Q  99 ttttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||    
T  18989529 ttttgtaacgaaaaatgtcttttatatagttgtatccaaacaaacta 18989575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 18999343 - 18999389
Alignment:
Q  99 ttttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||    
T  18999343 ttttgtaacgaaaaatgtcttttatatagttgtatccaaacaaacta 18999389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 143
Target Start/End: Complemental strand, 35223880 - 35223799
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaac 143  Q
    |||||||||| | ||||| ||| |||| ||||||||||||| || | ||||||||  |||||||||||| |||||||||||||    
T  35223880 agaggagagagaaaatatagttcaaaa-attgaactaatttggtgacaaaaaatccattttatatagttatatccaaacaaac 35223799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1644319 - 1644364
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  1644319 taaaaacagcttcaaatgagaagctgttaagagcatcttctcaaaa 1644364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 22644868 - 22644819
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||||||||| |||||| | ||||||||||||||||||||    
T  22644868 taattttataataaaaaatcacttttagaaagttgtatccaaacaaacta 22644819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 35527532 - 35527472
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||| |||||||||||||||||| ||||| || ||||||||||| ||||||||| |||||||    
T  35527532 aaaatattgaactaattttgtaacaaaaa-tcgcttttatatagctgtatccaagcaaacta 35527472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 141
Target Start/End: Original strand, 38087766 - 38087799
Alignment:
Q  108 aaaaaatctcttttatatagttgtatccaaacaa 141  Q
    ||||||||||||||||||||||||||||||||||    
T  38087766 aaaaaatctcttttatatagttgtatccaaacaa 38087799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 45689543 - 45689603
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||| |||||| ||||||  || |||||||||||||||| ||||||||||||    
T  45689543 aaaagattgaactagttttgttataaaat-tcacttttatatagttgtacccaaacaaacta 45689603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 11486446 - 11486406
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctctttt 121  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  11486446 tttaaaaaattgaactaattttgtaaaaaaaaatctctttt 11486406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 15641014 - 15641070
Alignment:
Q  90 ttgaactaattttgtaataaaaaa-tctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||| |||||| || ||||||||||| ||| |||||||||||||    
T  15641014 ttgaactaattttgtaaaaaaaaaatcgcttttatatagctgtttccaaacaaacta 15641070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 23808931 - 23809007
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaa 137  Q
    |||||| ||| | ||||| |||||||| ||  || |||||||||||  ||||||| |||||||||||||||||||||    
T  23808931 agaggaaagagaaaatatggtttaaaaaatctaattaattttgtaacgaaaaatcccttttatatagttgtatccaa 23809007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24162107 - 24162147
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct 41  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  24162107 taaaaacaacttcaaatgagaagctgttaagagcagcttct 24162147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 141
Target Start/End: Original strand, 37986005 - 37986061
Alignment:
Q  85 aaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaa 141  Q
    |||||||||||||| ||| ||  |||||||| ||||||||||||||||||| |||||    
T  37986005 aaagattgaactaaatttttatcaaaaaatcccttttatatagttgtatccgaacaa 37986061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 26175462 - 26175521
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaac 143  Q
    |||||||| |||||||||||||| |||||||   ||||||||||||  ||||||||||||    
T  26175462 aaaagatttaactaattttgtaacaaaaaattcattttatatagttacatccaaacaaac 26175521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 143
Target Start/End: Complemental strand, 7630156 - 7630126
Alignment:
Q  113 atctcttttatatagttgtatccaaacaaac 143  Q
    |||||||||||||||||||||||||||||||    
T  7630156 atctcttttatatagttgtatccaaacaaac 7630126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 15738952 - 15738914
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctctttta 122  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  15738952 aaaagattgaactaattttataacaaaaaatctctttta 15738914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15641517 - 15641472
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    |||||||||||||| | ||||||||||||||||| |||||| ||||    
T  15641517 taaaaacagtttcatacgagaagctgttaagagctgcttctcaaaa 15641472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 18990611 - 18990672
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||| || || |||||| | |||| || ||||||||||||||||||| ||||||||||    
T  18990611 aaaagatttaaatacttttgtgacaaaatatatcttttatatagttgtatcaaaacaaacta 18990672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 126
Target Start/End: Complemental strand, 30594255 - 30594226
Alignment:
Q  97 aattttgtaataaaaaatctcttttatata 126  Q
    ||||||||||||||||||||||||||||||    
T  30594255 aattttgtaataaaaaatctcttttatata 30594226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 35526221 - 35526281
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||| ||| |||||||||||||| |||| |||||||||||| || | |||||||||||||||    
T  35526221 aaaatattaaactaattttgtaacaaaa-atctcttttatacaggtatatccaaacaaacta 35526281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 10281998 - 10282042
Alignment:
Q  2 aaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    |||||||  ||||||||||||||||||||||| ||||||| ||||    
T  10281998 aaaaacaacttcaaatgagaagctgttaagagtagcttctcaaaa 10282042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 11485995 - 11485967
Alignment:
Q  117 cttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||||||||||||||||||    
T  11485995 cttttatatagttgtatccaaacaaacta 11485967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 26175377 - 26175421
Alignment:
Q  2 aaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    ||||| || |||||||||||||| |||||||||||||||| ||||    
T  26175377 aaaaatagcttcaaatgagaagcagttaagagcagcttctcaaaa 26175421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 29102726 - 29102678
Alignment:
Q  97 aattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||| |||||||| ||| |||||| | ||||||||||||||||||||    
T  29102726 aattttataataaaatatcacttttagaaagttgtatccaaacaaacta 29102678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31278340 - 31278300
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct 41  Q
    ||||||||| |||||||||||||||| | ||||||||||||    
T  31278340 taaaaacagcttcaaatgagaagctggtgagagcagcttct 31278300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 44434619 - 44434651
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagag 33  Q
    ||||||||| |||||||||||||||||||||||    
T  44434619 taaaaacagcttcaaatgagaagctgttaagag 44434651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47222486 - 47222526
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct 41  Q
    ||||||||  ||||||||||||||||||||||||| |||||    
T  47222486 taaaaacaacttcaaatgagaagctgttaagagcatcttct 47222526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 1030538 - 1030394
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnn-agaggagagacataatattgtttaaaagattgaactaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||          |||||||||| | ||||    |||||||||||||||||    
T  1030538 taaaaacagtttcaaatgagaagctgttaagagcagcttctcaaaaaatagattttttttttagaggagagagaaaataagagttaaaagattgaactaa 1030439  T
Q  99 ttttgtaataaaaaatctcttttatatagttgtatccaaacaaac 143  Q
    |||||||| |||||||| |||||||||||||||||||||||||||    
T  1030438 ttttgtaacaaaaaatcacttttatatagttgtatccaaacaaac 1030394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 35308073 - 35308219
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||         |||||||||| | |||||  |||||||||||||||||||    
T  35308073 taaaaacagcttcaaatgagaagttgttaagagcagcttctcaaaaaatagatttttttt-agaggagagagaaaatatgatttaaaagattgaactaat 35308171  T
Q  100 tttgtaataaaaaa--tctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| ||||||  || |||||||||||||||||||||||||||||    
T  35308172 tttgtaacaaaaaaaatcccttttatatagttgtatccaaacaaacta 35308219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 342700 - 342761
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  342700 aaaagattgaactaattttgtaacaaaaaatctcttttatatagttgtatccaaacaaacta 342761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 27964050 - 27963965
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||  |||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  27964050 agaggagagagaaaatataatttaaaaggttgaactaattttgtaacaaaaaatttcttttatatagttgtatccaaacaaactag 27963965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 40737517 - 40737436
Alignment:
Q  65 gagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||| | |||||| ||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  40737517 gagagagaaaatattttttaagagattgaactaattttgtaacaaaaaatttcttttatatagttgtatccaaacaaactag 40737436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 5424485 - 5424569
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||| ||| | ||||| |||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  5424485 agaggatagagaaaatatggtttaaaagattgaacaaattttgtaacaaaaagtctcttttatatagttgtatccaaacaaacta 5424569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 13916608 - 13916544
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  13916608 tttaaaagattgaactaattttgtaacaaaaaatcccttttatatagttgtatccaaacaaacta 13916544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 17072996 - 17073058
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaa-aatctcttttatatagttgtatccaaacaaa 142  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17072996 tttaaaagattgaactaattttgtaataaaaaaatctcttttatatagttgtatccaaacaaa 17073058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 17575274 - 17575212
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaa-tctcttttatatagttgtatccaaacaaa 142  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  17575274 tttaaaagattgaactaattttgtaataaaaaaatctcttttatatagttgtatccaaacaaa 17575212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 6007767 - 6007682
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||  ||||||||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||    
T  6007767 agaggagagagaaaatatgatttaaaagattgaactaattttgcaacaaaaaatcccttttatatagttgtattcaaacaaactag 6007682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 27881388 - 27881323
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  27881388 tttaaaaggttgaactaattttgtaacaaaaaatttcttttatatagttgtatccaaacaaactag 27881323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 27917611 - 27917546
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  27917611 tttaaaaggttgaactaattttgtaacaaaaaatttcttttatatagttgtatccaaacaaactag 27917546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 28021569 - 28021504
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  28021569 tttaaaaggttgaactaattttgtaacaaaaaatttcttttatatagttgtatccaaacaaactag 28021504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 15199821 - 15199741
Alignment:
Q  65 gagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||| | |||||| |||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||    
T  15199821 gagagagaaaatattatttaaaagattgaactaattttgtaataaaaaactccttttatatagttgtattcaaacaaacta 15199741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 27882254 - 27882191
Alignment:
Q  82 ttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||    
T  27882254 ttaaaagattgaattagttttgtaacaaaaaatctcttttatatagttgtatccaaacaaacta 27882191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 28022434 - 28022371
Alignment:
Q  82 ttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||    
T  28022434 ttaaaagattgaattagttttgtaacaaaaaatctcttttatatagttgtatccaaacaaacta 28022371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 27964889 - 27964827
Alignment:
Q  82 ttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaact 144  Q
    |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||    
T  27964889 ttaaaagattgaactagttttgtaacaaaaaatcccttttatatagttgtatccaaacaaact 27964827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 5424847 - 5424782
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaa-tctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||    
T  5424847 tttaaaagattgaactaattttgtaacaaaaaaatcccttttatatagttgtatccaaacaaacta 5424782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 5764976 - 5764895
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    |||||||||| | ||||||| |||||| |||||| ||| ||||||| |||||||| ||||||||||||||||||||||||||    
T  5764976 agaggagagagaaaatattgcttaaaatattgaagtaactttgtaacaaaaaatcccttttatatagttgtatccaaacaaa 5764895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 40796176 - 40796263
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaa--tctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | ||||| ||||||||||||||||||||||||||| ||||||  ||  |||||||||| ||||||||||||||||||    
T  40796176 agaggagagagaaaatatggtttaaaagattgaactaattttgtaaaaaaaaaattcatttttatatagctgtatccaaacaaactag 40796263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 17073382 - 17073297
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | ||||||||||||||||||||||||||||||||| |||||||   ||||| |  ||| ||||||||||||||||    
T  17073382 agaggagagagaaaatattgtttaaaagattgaactaattttgtaacaaaaaattcattttacacggttatatccaaacaaactag 17073297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 17574888 - 17574973
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | ||||||||||||||||||||||||||||||||| |||||||   ||||| |  ||| ||||||||||||||||    
T  17574888 agaggagagagaaaatattgtttaaaagattgaactaattttgtaacaaaaaattcattttacacggttatatccaaacaaactag 17574973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 28152538 - 28152484
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaa 138  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||    
T  28152538 aaaagattgaactaattttgtaacaaataatctattttatatagttgtatccaaa 28152484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 28828047 - 28828110
Alignment:
Q  81 tttaaaagattgaactaattttgtaat--aaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    |||||||||||||||||| |||||||   |||||||| ||||||||||||||||||||||||||    
T  28828047 tttaaaagattgaactaactttgtaacgaaaaaaatcccttttatatagttgtatccaaacaaa 28828110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 96 - 143
Target Start/End: Original strand, 9269294 - 9269341
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaac 143  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  9269294 taattttgtaataaaaaatctcttttatatagttgtggccaaacaaac 9269341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 27965022 - 27965168
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| |||||||||||||||||| |||| ||||||| ||||| ||||         |||||||| | | ||||| | |  || ||||||||||||    
T  27965022 taaaaacagcttcaaatgagaagctgttgagagtagcttctcaaaaaatagatttttttttagaggagatagaaaatatggatctaacgattgaactaat 27965121  T
Q  100 tttgtaataa-aaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| || |||||| ||||||||||| ||| |||||||||||||    
T  27965122 tttgtaacaataaaatcgcttttatatagctgtttccaaacaaacta 27965168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 5765365 - 5765453
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttg---taataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||| |||||||||||||||||||||||    || ||||||||  |||||||||||| |||| |||||||||||    
T  5765365 agaggagagagaaaatattttttaaaagattgaactaattttgcaacaaaaaaaaatccattttatatagttttatctaaacaaactag 5765453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 6008097 - 6008039
Alignment:
Q  88 gattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||| ||||||||||| |||||||| |||||||||| |||||| ||||||||||||    
T  6008097 gattgaaataattttgtaacaaaaaatcccttttatataattgtatgcaaacaaactag 6008039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 27882386 - 27882531
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| |||||||||||||||||| |||| ||||||| ||||| ||||         |||||||||| | ||| | | |  |||||||||||||||    
T  27882386 taaaaacagcttcaaatgagaagctgttgagagtagcttctcaaaaaatagatttttttt-agaggagagagaaaatgtggatctaaagattgaactaat 27882484  T
Q  100 tttgtaataa-aaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| || |||||| ||||||||||| ||| |||||||||||||    
T  27882485 tttgtaacaataaaatcgcttttatatagctgtttccaaacaaacta 27882531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 28022566 - 28022711
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| |||||||||||||||||| |||| ||||||| ||||| ||||         |||||||||| | ||| | | |  |||||||||||||||    
T  28022566 taaaaacagcttcaaatgagaagctgttgagagtagcttctcaaaaaatagatttttttt-agaggagagagaaaatgtggatctaaagattgaactaat 28022664  T
Q  100 tttgtaataa-aaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| || |||||| ||||||||||| ||| |||||||||||||    
T  28022665 tttgtaacaataaaatcgcttttatatagctgtttccaaacaaacta 28022711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 32855202 - 32855144
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaa-tctcttttatatagttgtatccaaacaa 141  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| ||||| ||||||||    
T  32855202 aaaagattgaactaattttgtaacaaaaaaatctcttttatataattgtaaccaaacaa 32855144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 1153633 - 1153744
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| || ||||||||||||||||||||||||| || ||||| ||||         |||||||||| | |||||  |||||||||||||||||||    
T  1153633 taaaaacagcttaaaatgagaagctgttaagagcagctactcaaaaaatagattttttt--agaggagagagaaaatatgatttaaaagattgaactaat 1153730  T
Q  100 tttgtaataaaaaa 113  Q
    ||||||| ||||||    
T  1153731 tttgtaacaaaaaa 1153744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 85 - 145
Target Start/End: Complemental strand, 24981579 - 24981519
Alignment:
Q  85 aaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| ||||||||||| |||||||| |||||| ||||| |||| |||||||||||    
T  24981579 aaagattgaattaattttgtaacaaaaaatcccttttacatagtcgtattcaaacaaacta 24981519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 45183025 - 45182967
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||||||||||||||||||||   ||||||   |||||||||||||||||||    
T  45183025 aaaagattgaactaattttgtaataaaaaattgtttttat---gttgtatccaaacaaacta 45182967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 1580351 - 1580302
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtat 133  Q
    ||||||||||||||||||||||| ||||||||  |||||||||| |||||    
T  1580351 aaaagattgaactaattttgtaacaaaaaatccattttatatagatgtat 1580302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 29475268 - 29475216
Alignment:
Q  93 aactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||| |||| ||   ||||||||||||||||||||||||||||    
T  29475268 aactaattttgtaaaaaaatattcattttatatagttgtatccaaacaaacta 29475216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Complemental strand, 4444075 - 4444036
Alignment:
Q  6 acagtttcaaatgagaagctgttaagagcagcttctaaaa 45  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  4444075 acagtttcaaatgagaagctgttatgggcagcttctaaaa 4444036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 41
Target Start/End: Original strand, 5765312 - 5765342
Alignment:
Q  11 ttcaaatgagaagctgttaagagcagcttct 41  Q
    |||||||||||||||||||||||||||||||    
T  5765312 ttcaaatgagaagctgttaagagcagcttct 5765342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 139
Target Start/End: Complemental strand, 339952 - 339872
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatct--cttttatatagttgtatccaaac 139  Q
    |||||||||| | ||||| | | ||||||||||||| |||||| || ||||||  |  |||||||||||||||||||||||    
T  339952 agaggagagagaaaatatgggtcaaaagattgaactgattttgaaacaaaaaaaattccttttatatagttgtatccaaac 339872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 5765098 - 5765134
Alignment:
Q  108 aaaaaatctcttttatatagttgtatccaaacaaact 144  Q
    |||||||  ||||||||||||||||||||||||||||    
T  5765098 aaaaaattccttttatatagttgtatccaaacaaact 5765134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28152621 - 28152581
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct 41  Q
    |||||||| ||| |||||||||||||||||||||| |||||    
T  28152621 taaaaacaatttaaaatgagaagctgttaagagcaacttct 28152581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 32693545 - 32693629
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | ||||| ||  ||| ||||||||||||||| | | |||||||  | ||||||||||| |||| ||||||||||    
T  32693545 agaggagagagaaaatatggtacaaatgattgaactaattttcttacaaaaaattccgtttatatagttatatcaaaacaaacta 32693629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 35103057 - 35103025
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagag 33  Q
    ||||||||||||||||||||||| |||||||||    
T  35103057 taaaaacagtttcaaatgagaagttgttaagag 35103025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 47796444 - 47796300
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnn-agaggagagacataatattgtttaaaagattgaactaa 98  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || |          ||| |||||| | |||||| |||||||||| |||||||    
T  47796444 taaaaacagtttcaaatgagaagctgttaagagcagcttctcaaaaaatatatatattttttagacgagagagaaaatattctttaaaagatagaactaa 47796345  T
Q  99 ttttgtaataaaaaatctcttttatatagttgtatccaaacaaac 143  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||    
T  47796344 ttttgtaataaaaaatttcttttatatagttgtatctaaacaaac 47796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 49243931 - 49243788
Alignment:
Q  3 aaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaattt 101  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||| ||||         ||| |||||| | |||||  |||||||||||||||||||||    
T  49243931 aaaacagcttcaaatgagaagctgttaggagcagcttctcaaaaaatagatttttttt-agatgagagagaaaatatcttttaaaagattgaactaattt 49243833  T
Q  102 tgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||    
T  49243832 tgtaacaaaaaatcccttttatatagttgtatccaaacaaactag 49243788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 11981865 - 11981722
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaat-tagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||  ||||         |||| ||| | | ||||||||||||||||||||||||||    
T  11981865 taaaaacagcttcaaatgagaagctgttaagagcagcttctaaaaaaatagatttttttt-agagtagaaaaa-aatattgtttaaaagattgaactaat 11981768  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||    
T  11981767 tttgtaa-caaaaatcccttttatatagttgtatccaaacaaactag 11981722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 17054381 - 17054236
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| || |||||||||||||||||||||||||||| ||||| || |         |||||||||| | ||||||||||||||||||||||||||    
T  17054381 taaaaacagcttaaaatgagaagctgttaagagcagcttctcaaaaaatatatttttttt-agaggagagagaaaatattgtttaaaagattgaactaat 17054283  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||| |||||||   ||||||||||||||||| |||||||||||    
T  17054282 tttgtaacaaaaaattcattttatatagttgtatcgaaacaaactag 17054236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 24686346 - 24686202
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||  ||||||||||||||||||||||||| ||||| ||||| ||||         |||||||||| | ||||| | ||||||||||||||||||    
T  24686346 taaaaacaacttcaaatgagaagctgttaagagcaacttctcaaaaaatagatttttta--agaggagagagaaaatatggattaaaagattgaactaat 24686249  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||    
T  24686248 tttgtaacaaaaaatcgcttttatatagctgtatccaaacaaactag 24686202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 6844557 - 6844472
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  6844557 agaggagagagaaaatattatttaaaagattaaactaattttgtaacaaaaaatctcttttatatagttgcatccaaacaaactag 6844472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 33675074 - 33674993
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    |||||||||| | ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||    
T  33675074 agaggagagagaaaatattgtttaaaagattgaattaattttgtaacaaaaaatctcttttatatagttgtatccaatcaaa 33674993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 48738589 - 48738505
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| ||||||||||    
T  48738589 agaggagagagaaaatattgtttaaaagattgaactaattttgtaacaaaaaatcacttttatacagttgtatctaaacaaacta 48738505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 45808072 - 45807990
Alignment:
Q  65 gagagacataatattgtttaaaagattgaactaattttgtaataa-aaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||| | ||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  45808072 gagagagaaaatattgtttaaaaggttgaactaattttgtaataaaaaaatctcttttatataggtgtatccaaacaaactag 45807990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 26272028 - 26271943
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataa-aaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||  | ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||    
T  26272028 agaggagaggaaaaatatggtttaaaagattgaactaattttgtaataaaaaaatctcttttatatagttgtattgaaacaaacta 26271943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 45296767 - 45296852
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctc-ttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | ||||| |||||||||||||||||||||||||||||||||||||| |||| || |||||||| |||||||||||    
T  45296767 agaggagagagaaaatatagtttaaaagattgaactaattttgtaataaaaaatctctttttgtaaagttgtattcaaacaaacta 45296852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 142
Target Start/End: Original strand, 43325904 - 43326035
Alignment:
Q  11 ttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaattttgtaataa 109  Q
    |||||||||||| |||||||||||||||||| ||||| ||||         |||||||||| | |||||  ||||||||||| |||||||||||||| ||    
T  43325904 ttcaaatgagaaactgttaagagcagcttcttaaaaaatagatttttttt-agaggagagagaaaatatgttttaaaagattaaactaattttgtaacaa 43326002  T
Q  110 aaaatctcttttatatagttgtatccaaacaaa 142  Q
    |||||| |||||||||| |||||||||||||||    
T  43326003 aaaatcccttttatataattgtatccaaacaaa 43326035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 47794996 - 47795131
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| |||          |||||||||| | |||||  |||||||| ||||||||||    
T  47794996 taaaaacagcttcaaatgagaagctgttaagagcagcttctcaaaaaatag---tttttttagaggagagagaaaatatgatttaaaagtttgaactaat 47795092  T
Q  100 tttgtaataaaaaatctcttttatatagttgtatccaaa 138  Q
    ||||||| ||||||||  ||||||||| |||||||||||    
T  47795093 tttgtaacaaaaaatccattttatatatttgtatccaaa 47795131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 42835001 - 42834919
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | ||||| | ||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||    
T  42835001 agaggagagagaaaatatagattaaaagattgaactaattttgtaacaaaaaatcccttttatatagt--tatccaaacaaacta 42834919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 47795431 - 47795516
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||  ||||||||||||| |||||||||||| |||||||| |||||||||||| ||||| |||||||||||    
T  47795431 agaggagagagaaaatataatttaaaagattgagctaattttgtaacaaaaaatcccttttatatagtcgtatcaaaacaaactag 47795516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 6318982 - 6318922
Alignment:
Q  82 ttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  6318982 ttaaaagattgaactaattttgtaacaaaaaatcccttttatatagttgcatccaaacaaa 6318922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 47796030 - 47795945
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||  ||||||||||||| |||||||||||| |||||||  |||||||||||| ||||| |||||||||||    
T  47796030 agaggagagagaaaatataatttaaaagattgagctaattttgtaacaaaaaattccttttatatagtcgtatcaaaacaaactag 47795945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 43114956 - 43115040
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | ||||| | || ||||||| |||||||||||||| ||||||||  |||||||||| |||||||||||||||||    
T  43114956 agaggagagagaaaatatagatttaaagattaaactaattttgtaacaaaaaatcgattttatatagctgtatccaaacaaacta 43115040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 8795313 - 8795459
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||| ||||         |||||||||| | | ||    |||||| |||||||||||    
T  8795313 taaaaacagcttcaaatgagaagctgttaagagcaacttctaaaaaaatagatttttttttagaggagagagaaattaaatgttaaaatattgaactaat 8795412  T
Q  100 tttgtaataaaaaatctctttta-tatagttgtatccaaacaaacta 145  Q
    ||||||| ||||||||||||| | ||||| | |||||||||||||||    
T  8795413 tttgtaacaaaaaatctctttaattatagatttatccaaacaaacta 8795459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 24705518 - 24705397
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||| |||||||||||||||||||||||||| |||| ||||| || |         |||||||||| | |||||  |||||||||||||||||||    
T  24705518 taaaaacagcttcaaatgagaagctgttaagagcagtttctcaaaaaata-aatattttttagaggagagagaaaatatattttaaaagattgaactaat 24705420  T
Q  100 tttgtaataaaaaatctctttta 122  Q
    ||||||| |||||||| ||||||    
T  24705419 tttgtaacaaaaaatccctttta 24705397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 43114817 - 43114755
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaa-tctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||||||||| || |||||| |||||||||||||||| |||||||||||||||    
T  43114817 aaaagattgaactaattttgcaacaaaaaaatctcttttatatagttatatccaaacaaacta 43114755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 11981187 - 11981120
Alignment:
Q  82 ttaaaagattgaactaattttgtaata---aaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||||||||| |||||||| |   ||||||||||||||||||| ||||||||||||||||||    
T  11981187 ttaaaagattgaactagttttgtaaaataaaaaaatctcttttatatagatgtatccaaacaaactag 11981120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 42429750 - 42429705
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  42429750 taaaaacagtttcaaatgagaagctgttaagagcagcttctcaaaa 42429705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 42834619 - 42834692
Alignment:
Q  74 aatattgtttaaaagattgaactaattttgt-aataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||||||||||||||||||||||||||| |  ||||||||  |||||||||| |||||| |||||||||||    
T  42834619 aatattgtttaaaagattgaactaattttgtcacaaaaaaatccattttatatagctgtatctaaacaaactag 42834692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 47794821 - 47794874
Alignment:
Q  74 aatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatag 127  Q
    ||||| ||||||||||||||||||||||||||| |||||||| |||||||||||    
T  47794821 aatatggtttaaaagattgaactaattttgtaacaaaaaatcccttttatatag 47794874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 49480262 - 49480323
Alignment:
Q  85 aaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||||||||||||||| |||||||  |||||| ||||||||||| |||||||||||    
T  49480262 aaagattgaactaattttgtaacaaaaaattccttttacatagttgtatcaaaacaaactag 49480323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 12016998 - 12016852
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaat-tagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||  ||||||||||||||||||||||| ||||| ||||||  ||||         |||||||||| | ||||| | ||||||||||||||||||    
T  12016998 taaaaacaacttcaaatgagaagctgttaagagaagcttataaaaaaatagatttttttt-agaggagagaaaaaatatggattaaaagattgaactaat 12016900  T
Q  100 tttgtaataaaaaat--ctcttttatatagttgtatccaaacaaacta 145  Q
    ||| ||| |||||||  || || ||||||| |||||||||||||||||    
T  12016899 tttataacaaaaaattccttttatatatagctgtatccaaacaaacta 12016852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 39842920 - 39842797
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaat 99  Q
    ||||||||  ||||||||||||||| || |||||||||||| ||||| ||||         |||||||||| | |||||  |||||||||||||||||||    
T  39842920 taaaaacaacttcaaatgagaagctattgagagcagcttctcaaaaaatagatttttttttagaggagagagaaaatatgatttaaaagattgaactaat 39842821  T
Q  100 tttgtaataaaaaatctcttttat 123  Q
    ||| ||| |||||||| |||||||    
T  39842820 tttctaacaaaaaatcccttttat 39842797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 40793087 - 40793031
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaa 137  Q
    ||||||||||||||||||||||||||  |||||||||| |||| |||||||||||||    
T  40793087 tttaaaagattgaactaattttgtaacgaaaaatctctcttatgtagttgtatccaa 40793031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10338224 - 10338269
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  10338224 taaaaacagcttcaaatgagaagctgttaagagcagcttctcaaaa 10338269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 11981418 - 11981493
Alignment:
Q  74 aatattgtttaaaagattgaactaattttgtaataaaaaa---tctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||||||  |||||||||||||| ||| ||||||   || ||||||||||||||||| ||||||||||||    
T  11981418 aatattgtttaaataattgaactaattttttaacaaaaaaaaatcccttttatatagttgtatacaaacaaactag 11981493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 33241232 - 33241089
Alignment:
Q  2 aaaaacagtttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaatt 100  Q
    |||||||  ||||||| ||||||||||||||||||||||| ||||| ||||         ||||||| || | |||||  ||||||| |||||||||| |    
T  33241232 aaaaacaacttcaaattagaagctgttaagagcagcttctcaaaaactaga-ttttttttagaggagggagaaaatataatttaaaatattgaactaaat 33241134  T
Q  101 ttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||| ||| |||| ||||||||| |||| ||| ||||||||||    
T  33241133 ttgtaacaaagaatcccttttatatggttgaatctaaacaaacta 33241089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 52404167 - 52404257
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaa-----tctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||  |||||||| ||||||||||||| ||| ||||||     || ||||||||||||||||||| ||||||||||    
T  52404167 agaggagagagaaaatatgatttaaaagtttgaactaattttataacaaaaaaaaaaatcccttttatatagttgtatcccaacaaactag 52404257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6941512 - 6941467
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    ||||||||| |||||||||||||||||||| |||||||||| ||||    
T  6941512 taaaaacagcttcaaatgagaagctgttaaaagcagcttctcaaaa 6941467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 33813287 - 33813336
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||||||||| |||||| | ||||||||||||||||||||    
T  33813287 taattttataataaaaaatcacttttagaaagttgtatccaaacaaacta 33813336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 33872757 - 33872806
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||||||||| |||||| | ||||||||||||||||||||    
T  33872757 taattttataataaaaaatcacttttagaaagttgtatccaaacaaacta 33872806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 46675732 - 46675781
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  46675732 taattttgtaacaaaaaatctcttttacataggtgtatcctaacaaacta 46675781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 47793062 - 47793107
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||    
T  47793062 taaaaacagcttcaaatgagaagttgttaagagcagcttctcaaaa 47793107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 47882389 - 47882345
Alignment:
Q  89 attgaactaattttgtaataaaaaatctcttttatatagttgtat 133  Q
    ||||||||||||||||||   ||||||||||||||||||||||||    
T  47882389 attgaactaattttgtaacttaaaatctcttttatatagttgtat 47882345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 143
Target Start/End: Complemental strand, 9626238 - 9626191
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaac 143  Q
    |||||| |||| | |||||||||||||||||||||| |||||||||||    
T  9626238 taatttcgtaacataaaatctcttttatatagttgtttccaaacaaac 9626191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 42429666 - 42429604
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaa-tctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||| |  |||||||| |||||| || ||||||||||| |||||||||||||||||    
T  42429666 aaaagattgaatttgttttgtaacaaaaaaatcccttttatatagatgtatccaaacaaacta 42429604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 126
Target Start/End: Complemental strand, 45378409 - 45378367
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatata 126  Q
    |||||||||||||| |||||||| |||||||| ||||||||||    
T  45378409 aaaagattgaactagttttgtaacaaaaaatcccttttatata 45378367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46675671 - 46675716
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    ||||||||| ||||||||||||| ||||||||||| ||||| ||||    
T  46675671 taaaaacagcttcaaatgagaagatgttaagagcaacttctcaaaa 46675716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 47793383 - 47793335
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| ||||||||||| ||||||| | ||||||||||||||||||||    
T  47793383 taattttataataaaaaat-tcttttagaaagttgtatccaaacaaacta 47793335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 6941452 - 6941381
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtat 133  Q
    |||||||||| | |||||| |||||||||||||| | |||||||||  |||||||  ||| ||||||||||||    
T  6941452 agaggagagaaaaaatattttttaaaagattgaagttattttgtaa-caaaaatccatttgatatagttgtat 6941381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 146
Target Start/End: Original strand, 6941651 - 6941683
Alignment:
Q  114 tctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||| ||||||||||||||||||||||||    
T  6941651 tctcttttgtatagttgtatccaaacaaactag 6941683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 49480178 - 49480218
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct 41  Q
    ||||||||| |||||| ||||||||||| ||||||||||||    
T  49480178 taaaaacagcttcaaacgagaagctgttgagagcagcttct 49480218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 6e-27; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 61 - 146
Target Start/End: Original strand, 2258698 - 2258783
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    |||||||||| | |||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  2258698 agaggagagagaaaatatgatttaaaagattgaactaattttgtaacaaaaaatctcttttatatagttgtatcaaaacaaactag 2258783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 21981003 - 21980919
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | |||||| |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  21981003 agaggagagagaaaatattttttaaaagattgaactaattttgtaacaaaaaattccttttatatagttgtatccaaacaaacta 21980919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 7204795 - 7204872
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaa 138  Q
    |||||||||| | |||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7204795 agaggagagaaaaaatatgatttaaaagattgaactaattttgtaacaaaaaatctcttttatatagttgtatccaaa 7204872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 145
Target Start/End: Complemental strand, 33438755 - 33438676
Alignment:
Q  65 gagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||| | ||||| ||||||||||||||||||||||| ||| ||||| |||||||||||||||||||| |||||||||||    
T  33438755 gagagagaaaatatggtttaaaagattgaactaattttttaacaaaaa-tctcttttatatagttgtattcaaacaaacta 33438676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 10780179 - 10780250
Alignment:
Q  74 aatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||| |||||||||||||||||| |||| ||| ||||||||| |||||||||||||||| |||||||||||    
T  10780179 aatatggtttaaaagattgaactagttttctaacaaaaaatctattttatatagttgtatacaaacaaacta 10780250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 26001246 - 26001330
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||| ||||||| |||||  || |||| ||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  26001246 agagtagagacaaaatataattcaaaatattaaactaattttttaacaaaaaatctcttttatatagttgtatccaaataaacta 26001330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 9740606 - 9740647
Alignment:
Q  89 attgaactaattttgtaataaaaaatctcttttatatagttg 130  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  9740606 attgaactaattttgtaacaaaaaatctcttttatatagttg 9740647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 14094090 - 14094139
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| ||| |||||||| |||||||||||||||||||||||||||||    
T  14094090 taattttataacaaaaaatcgcttttatatagttgtatccaaacaaacta 14094139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 142
Target Start/End: Complemental strand, 26209268 - 26209135
Alignment:
Q  11 ttcaaatgagaagctgttaagagcagcttct-aaaaattagannnnnnnnnagaggagagacataatattgtttaaaagattgaactaattttgtaataa 109  Q
    ||||||||||||||||||||||||||||||| ||||| ||||         |||||||||| | ||||   ||||||| ||| |||||||||||||| ||    
T  26209268 ttcaaatgagaagctgttaagagcagcttctcaaaaaataga-ttttttttagaggagagagaaaatagaatttaaaatattaaactaattttgtaacaa 26209170  T
Q  110 aaaatctct--tttatatagttgtatccaaacaaa 142  Q
    |||||| ||  | |||||||||||||| |||||||    
T  26209169 aaaatcccttatatatatagttgtatctaaacaaa 26209135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4826140 - 4826185
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    ||||||||||||||||||||||| |||||| |||||||||| ||||    
T  4826140 taaaaacagtttcaaatgagaagatgttaacagcagcttctcaaaa 4826185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21092734 - 21092694
Alignment:
Q  1 taaaaacagtttcaaatgagaagctgttaagagcagcttct 41  Q
    ||||||||||||||||||||||||| ||||||||| |||||    
T  21092734 taaaaacagtttcaaatgagaagctcttaagagcatcttct 21092694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 46
Target Start/End: Original strand, 3306923 - 3306958
Alignment:
Q  11 ttcaaatgagaagctgttaagagcagcttctaaaaa 46  Q
    ||||||||||||||||||||||||||||||| ||||    
T  3306923 ttcaaatgagaagctgttaagagcagcttctcaaaa 3306958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 1577424 - 1577462
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctctttta 122  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  1577424 aaaagattgaactaattttataacaaaaaatctctttta 1577462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 3307396 - 3307424
Alignment:
Q  117 cttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||||||||||||||||||    
T  3307396 cttttatatagttgtatccaaacaaacta 3307424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 7858531 - 7858479
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtat 133  Q
    ||||||||||| |||||||||||||  ||||||  | ||||||||||||||||    
T  7858531 tttaaaagattaaactaattttgtagaaaaaaaattattttatatagttgtat 7858479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 20469376 - 20469404
Alignment:
Q  117 cttttatatagttgtatccaaacaaacta 145  Q
    |||||||||||||||||||||||||||||    
T  20469376 cttttatatagttgtatccaaacaaacta 20469404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 150188 - 150269
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaa 142  Q
    |||||||||| | ||||| ||||||||||||||||||||||||| |||||||||| |||||||||| ||| |||||||||||    
T  150188 agaggagagagaaaatatggtttaaaagattgaactaattttgttataaaaaatcccttttatataattgcatccaaacaaa 150269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 22082 - 22000
Alignment:
Q  61 agaggagagacataatattgtttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||||| | ||||| | ||||||||||||||||||||||||| |||||||| ||||||||||||  |||||||||||||||    
T  22082 agaggagagagaaaatatagattaaaagattgaactaattttgtaacaaaaaatcccttttatatagt--tatccaaacaaacta 22000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 21700 - 21773
Alignment:
Q  74 aatattgtttaaaagattgaactaattttgt-aataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||||||||||||||||||||||||||| |  ||||||||  |||||||||| |||||| |||||||||||    
T  21700 aatattgtttaaaagattgaactaattttgtcacaaaaaaatccattttatatagctgtatctaaacaaactag 21773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 3291 - 3243
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaact 144  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  3291 taattttgtaacaaaaaatcacttttatatagttgtatccaaacaaact 3243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 1955 - 2019
Alignment:
Q  81 tttaaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaactag 146  Q
    ||||||||||| |||||||||||||| |||||||| | ||||||||||||| || |||||||||||    
T  1955 tttaaaagattaaactaattttgtaacaaaaaatc-cctttatatagttgtctcaaaacaaactag 2019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 7232 - 7186
Alignment:
Q  99 ttttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||    
T  7232 ttttgtaacgaaaaatgtcttttatatagttgtatccaaacaaacta 7186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 6149 - 6088
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    |||||||| || || |||||| | |||| || ||||||||||||||||||| ||||||||||    
T  6149 aaaagatttaaatacttttgtgacaaaatatatcttttatatagttgtatcaaaacaaacta 6088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 38585 - 38647
Alignment:
Q  84 aaaagattgaactaattttgtaat-aaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||||| |||||||||| ||||||||  ||  |||| |||||||||||||||||||    
T  38585 aaaagattgaacttattttgtaataaaaaaatccattgcatatggttgtatccaaacaaacta 38647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 29103 - 29164
Alignment:
Q  84 aaaagattgaactaattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||||||  | ||||||||| |||| ||  |||||||||||||||||| ||||||||||    
T  29103 aaaagattgagattattttgtaacaaaatattccttttatatagttgtatctaaacaaacta 29164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 71396 - 71445
Alignment:
Q  96 taattttgtaataaaaaatctcttttatatagttgtatccaaacaaacta 145  Q
    ||||||| |||||||||||| |||||| | ||||||||| ||||||||||    
T  71396 taattttataataaaaaatcacttttagaaagttgtatctaaacaaacta 71445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University