View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20551_high_10 (Length: 347)

Name: NF20551_high_10
Description: NF20551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20551_high_10
NF20551_high_10
[»] scaffold0433 (2 HSPs)
scaffold0433 (23-230)||(7107-7314)
scaffold0433 (266-322)||(7015-7071)
[»] scaffold0234 (4 HSPs)
scaffold0234 (23-230)||(2321-2528)
scaffold0234 (23-230)||(11212-11419)
scaffold0234 (266-322)||(2564-2620)
scaffold0234 (266-322)||(11455-11511)
[»] chr7 (27 HSPs)
chr7 (23-230)||(29327784-29327991)
chr7 (23-230)||(11536062-11536269)
chr7 (23-230)||(11542980-11543187)
chr7 (23-228)||(18561009-18561214)
chr7 (23-228)||(15148144-15148349)
chr7 (23-228)||(15152445-15152650)
chr7 (23-228)||(12750828-12751033)
chr7 (27-224)||(12738542-12738739)
chr7 (23-228)||(18257842-18258047)
chr7 (42-224)||(13392157-13392338)
chr7 (23-208)||(2364917-2365101)
chr7 (266-323)||(2653275-2653332)
chr7 (266-323)||(12738442-12738499)
chr7 (38-197)||(7396221-7396381)
chr7 (266-322)||(11543223-11543279)
chr7 (137-224)||(39111819-39111905)
chr7 (266-322)||(11536305-11536361)
chr7 (266-322)||(12750733-12750789)
chr7 (266-322)||(15152350-15152406)
chr7 (267-322)||(29327690-29327745)
chr7 (266-322)||(15148049-15148105)
chr7 (115-156)||(3132748-3132789)
chr7 (81-180)||(10234179-10234278)
chr7 (267-322)||(13392030-13392085)
chr7 (198-230)||(2653207-2653239)
chr7 (266-322)||(18258087-18258143)
chr7 (151-201)||(29982995-29983045)
[»] chr5 (20 HSPs)
chr5 (23-230)||(24695466-24695673)
chr5 (23-230)||(18569863-18570070)
chr5 (23-228)||(19714498-19714703)
chr5 (23-224)||(19707218-19707419)
chr5 (42-225)||(27347497-27347679)
chr5 (23-224)||(22547016-22547217)
chr5 (45-226)||(17285754-17285935)
chr5 (121-230)||(39537962-39538071)
chr5 (23-164)||(18807034-18807175)
chr5 (45-226)||(17298907-17299088)
chr5 (266-322)||(24695709-24695765)
chr5 (121-224)||(31886537-31886640)
chr5 (25-110)||(39538708-39538793)
chr5 (266-322)||(19714742-19714798)
chr5 (266-322)||(19707462-19707518)
chr5 (266-322)||(27347722-27347778)
chr5 (115-204)||(33477390-33477479)
chr5 (266-314)||(18570108-18570156)
chr5 (267-322)||(39537870-39537925)
chr5 (115-180)||(11479420-11479486)
[»] chr4 (47 HSPs)
chr4 (23-230)||(19926760-19926967)
chr4 (23-230)||(10621333-10621540)
chr4 (23-230)||(26970463-26970670)
chr4 (23-230)||(55612683-55612890)
chr4 (23-230)||(5707320-5707527)
chr4 (23-230)||(10628412-10628619)
chr4 (23-230)||(26963640-26963847)
chr4 (23-228)||(28393134-28393339)
chr4 (23-230)||(5713948-5714155)
chr4 (23-230)||(868597-868804)
chr4 (23-228)||(18262214-18262419)
chr4 (23-228)||(4426604-4426808)
chr4 (23-228)||(18269070-18269280)
chr4 (23-218)||(8845215-8845410)
chr4 (23-218)||(8858179-8858374)
chr4 (23-222)||(20311299-20311499)
chr4 (115-230)||(12357136-12357251)
chr4 (23-224)||(10677555-10677753)
chr4 (23-224)||(10891195-10891393)
chr4 (23-224)||(5668125-5668327)
chr4 (24-228)||(5616215-5616421)
chr4 (23-224)||(35223576-35223767)
chr4 (23-204)||(21454137-21454319)
chr4 (266-323)||(19927003-19927060)
chr4 (266-322)||(5713856-5713912)
chr4 (266-322)||(26963548-26963604)
chr4 (266-322)||(26970371-26970427)
chr4 (266-322)||(5707228-5707284)
chr4 (266-322)||(10621576-10621632)
chr4 (266-322)||(12357044-12357100)
chr4 (266-320)||(868507-868561)
chr4 (266-323)||(17142372-17142429)
chr4 (266-322)||(10628655-10628711)
chr4 (266-322)||(55612594-55612650)
chr4 (266-324)||(4426847-4426905)
chr4 (268-322)||(28393380-28393434)
chr4 (266-322)||(18268976-18269032)
chr4 (31-192)||(56516094-56516255)
chr4 (115-181)||(39074279-39074346)
chr4 (266-315)||(55992680-55992729)
chr4 (121-180)||(11161913-11161972)
chr4 (41-92)||(39074218-39074269)
chr4 (24-192)||(30040750-30040919)
chr4 (266-307)||(5668371-5668412)
chr4 (266-314)||(8845118-8845166)
chr4 (266-314)||(8858082-8858130)
chr4 (266-306)||(18262136-18262176)
[»] chr1 (26 HSPs)
chr1 (23-230)||(18252030-18252237)
chr1 (23-230)||(27131409-27131616)
chr1 (23-230)||(18532514-18532721)
chr1 (23-228)||(16359035-16359240)
chr1 (23-228)||(27310577-27310782)
chr1 (23-228)||(21171233-21171438)
chr1 (23-224)||(36816633-36816834)
chr1 (23-230)||(3855919-3856126)
chr1 (23-230)||(22657221-22657429)
chr1 (23-224)||(27277557-27277756)
chr1 (23-196)||(12006539-12006712)
chr1 (23-196)||(12014284-12014457)
chr1 (23-218)||(9917918-9918106)
chr1 (266-323)||(18251935-18251992)
chr1 (266-323)||(18532757-18532814)
chr1 (266-322)||(27310821-27310877)
chr1 (266-322)||(16359280-16359336)
chr1 (123-200)||(3403248-3403325)
chr1 (123-200)||(3443494-3443571)
chr1 (266-322)||(21171479-21171535)
chr1 (273-322)||(22657472-22657521)
chr1 (155-224)||(30720625-30720694)
chr1 (273-314)||(36816885-36816926)
chr1 (266-322)||(3856164-3856220)
chr1 (266-322)||(27131652-27131704)
chr1 (266-322)||(27277800-27277856)
[»] chr3 (53 HSPs)
chr3 (23-230)||(6110064-6110271)
chr3 (23-230)||(10572592-10572799)
chr3 (23-228)||(16482483-16482688)
chr3 (23-224)||(17781118-17781319)
chr3 (23-228)||(18522665-18522870)
chr3 (23-230)||(15600884-15601091)
chr3 (23-230)||(15607429-15607636)
chr3 (23-227)||(13211305-13211509)
chr3 (23-230)||(13248607-13248814)
chr3 (23-224)||(19089745-19089946)
chr3 (23-230)||(8490488-8490702)
chr3 (23-230)||(15357586-15357793)
chr3 (23-224)||(10579355-10579556)
chr3 (23-228)||(13516813-13517018)
chr3 (23-228)||(18519980-18520182)
chr3 (23-228)||(17200184-17200389)
chr3 (23-224)||(32056900-32057101)
chr3 (23-211)||(15342219-15342407)
chr3 (23-224)||(1647521-1647726)
chr3 (69-230)||(18640792-18640953)
chr3 (38-230)||(29924971-29925163)
chr3 (38-230)||(29974124-29974316)
chr3 (42-228)||(16200128-16200313)
chr3 (42-228)||(16200434-16200619)
chr3 (23-223)||(24253388-24253589)
chr3 (23-124)||(17136465-17136566)
chr3 (167-228)||(18534758-18534819)
chr3 (266-322)||(6109972-6110028)
chr3 (266-322)||(8490396-8490452)
chr3 (266-322)||(13248515-13248571)
chr3 (266-322)||(13211211-13211267)
chr3 (266-322)||(18640989-18641045)
chr3 (273-322)||(10579604-10579653)
chr3 (183-228)||(18510924-18510969)
chr3 (266-322)||(17136137-17136193)
chr3 (273-322)||(10572841-10572890)
chr3 (266-322)||(15607672-15607729)
chr3 (273-322)||(17200434-17200483)
chr3 (266-322)||(15351237-15351293)
chr3 (266-322)||(15357829-15357885)
chr3 (266-322)||(16482727-16482782)
chr3 (266-322)||(18519885-18519941)
chr3 (266-323)||(1647768-1647825)
chr3 (266-322)||(15601127-15601184)
chr3 (266-322)||(13516719-13516775)
chr3 (278-322)||(17781370-17781414)
chr3 (278-322)||(19089997-19090041)
chr3 (266-322)||(32057144-32057200)
chr3 (266-322)||(18510829-18510885)
chr3 (266-322)||(18522570-18522626)
chr3 (266-314)||(18534671-18534719)
chr3 (266-322)||(29924879-29924935)
chr3 (266-322)||(29974032-29974088)
[»] chr6 (29 HSPs)
chr6 (23-228)||(16566320-16566525)
chr6 (23-230)||(29308890-29309097)
chr6 (23-230)||(29315850-29316057)
chr6 (23-230)||(17691440-17691647)
chr6 (23-230)||(27381252-27381459)
chr6 (23-230)||(27471635-27471842)
chr6 (23-228)||(188977-189182)
chr6 (23-228)||(17684469-17684674)
chr6 (23-228)||(11651725-11651930)
chr6 (23-228)||(25537159-25537364)
chr6 (23-228)||(13359269-13359474)
chr6 (23-207)||(27925772-27925961)
chr6 (38-211)||(8509941-8510115)
chr6 (23-191)||(20553587-20553755)
chr6 (266-320)||(17691683-17691737)
chr6 (273-322)||(27381502-27381551)
chr6 (273-322)||(27471885-27471934)
chr6 (266-322)||(29308798-29308854)
chr6 (266-322)||(29315758-29315814)
chr6 (23-192)||(17850495-17850663)
chr6 (266-322)||(17684712-17684768)
chr6 (268-322)||(11651630-11651684)
chr6 (24-192)||(20736604-20736773)
chr6 (266-322)||(25537405-25537461)
chr6 (168-223)||(31258065-31258120)
chr6 (266-314)||(13359512-13359560)
chr6 (266-314)||(16566563-16566611)
chr6 (266-324)||(189221-189282)
chr6 (115-192)||(28605854-28605931)
[»] scaffold0657 (2 HSPs)
scaffold0657 (23-230)||(993-1200)
scaffold0657 (266-323)||(900-957)
[»] scaffold0390 (4 HSPs)
scaffold0390 (23-230)||(6934-7141)
scaffold0390 (23-230)||(13950-14157)
scaffold0390 (266-322)||(7177-7233)
scaffold0390 (266-322)||(14193-14249)
[»] chr8 (18 HSPs)
chr8 (23-230)||(21940665-21940872)
chr8 (23-228)||(22171491-22171694)
chr8 (29-228)||(28554885-28555084)
chr8 (23-224)||(6094129-6094330)
chr8 (23-224)||(24642655-24642856)
chr8 (97-224)||(24636860-24636987)
chr8 (26-218)||(38232380-38232570)
chr8 (39-200)||(32872857-32873019)
chr8 (266-323)||(22070107-22070164)
chr8 (266-322)||(21940573-21940629)
chr8 (273-322)||(24642556-24642605)
chr8 (266-322)||(6094031-6094087)
chr8 (266-322)||(22171396-22171452)
chr8 (266-322)||(28554791-28554847)
chr8 (26-209)||(2375027-2375208)
chr8 (129-192)||(10920234-10920297)
chr8 (23-108)||(14983920-14984004)
chr8 (285-322)||(24636605-24636642)
[»] chr2 (13 HSPs)
chr2 (23-230)||(21330248-21330455)
chr2 (23-230)||(18796506-18796713)
chr2 (23-228)||(18619807-18620011)
chr2 (85-224)||(19692598-19692737)
chr2 (38-166)||(20977956-20978084)
chr2 (23-196)||(36270199-36270373)
chr2 (266-323)||(21330493-21330550)
chr2 (23-196)||(18822115-18822290)
chr2 (23-110)||(18852059-18852146)
chr2 (23-93)||(22183483-22183553)
chr2 (23-59)||(12098618-12098654)
chr2 (266-322)||(19692773-19692829)
chr2 (39-194)||(36802664-36802820)
[»] scaffold0220 (2 HSPs)
scaffold0220 (23-230)||(18288-18495)
scaffold0220 (266-322)||(18196-18252)
[»] scaffold0186 (2 HSPs)
scaffold0186 (23-230)||(25990-26197)
scaffold0186 (267-322)||(26231-26286)
[»] scaffold0063 (2 HSPs)
scaffold0063 (23-228)||(5531-5736)
scaffold0063 (266-314)||(5444-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (47-228)||(230365-230545)
scaffold0008 (266-322)||(230584-230640)
[»] scaffold0176 (2 HSPs)
scaffold0176 (167-230)||(8447-8510)
scaffold0176 (266-322)||(8546-8602)
[»] scaffold0203 (1 HSPs)
scaffold0203 (266-322)||(23769-23825)
[»] scaffold0326 (2 HSPs)
scaffold0326 (274-322)||(16523-16571)
scaffold0326 (197-230)||(16615-16648)
[»] scaffold0705 (1 HSPs)
scaffold0705 (266-322)||(41-97)
[»] scaffold0637 (1 HSPs)
scaffold0637 (266-322)||(8944-9000)
[»] scaffold0767 (1 HSPs)
scaffold0767 (286-327)||(1-42)
[»] scaffold0565 (2 HSPs)
scaffold0565 (266-320)||(10202-10256)
scaffold0565 (180-211)||(10127-10158)
[»] scaffold0170 (1 HSPs)
scaffold0170 (273-322)||(5878-5927)
[»] scaffold0032 (1 HSPs)
scaffold0032 (129-201)||(92194-92267)


Alignment Details
Target: scaffold0433 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 7314 - 7107
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7314 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatacttttagaatagtttcattatgttt 7215  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7214 aatggggtctcacaattaagttatacttaatgttctattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 7115  T
Q  223 tgccttgt 230  Q
    | ||||||    
T  7114 taccttgt 7107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 7071 - 7015
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7071 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 7015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 192; Significance: 1e-104; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 2321 - 2528
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  2321 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 2420  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2421 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 2520  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  2521 tgccttgt 2528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 11212 - 11419
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  11212 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 11311  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11312 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 11411  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  11412 tgccttgt 11419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 2564 - 2620
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2564 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 2620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 11455 - 11511
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11455 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 11511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 29327991 - 29327784
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  29327991 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 29327892  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327891 aatggggtctcacaattaagttatacttaatgttccattaaactgactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 29327792  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  29327791 tgccttgt 29327784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 11536062 - 11536269
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||    
T  11536062 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgttt 11536161  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536162 aatggggtctcacaattaagttgtacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 11536261  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  11536262 tgccttgt 11536269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 11542980 - 11543187
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||    
T  11542980 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgttt 11543079  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543080 aatggggtctgacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 11543179  T
Q  223 tgccttgt 230  Q
    ||| ||||    
T  11543180 tgcattgt 11543187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 18561214 - 18561009
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | ||||||    
T  18561214 atcatcagtctacccacataatagtctctatgctttaatgatatcccacctctcaataaagcttgactacagatactttaagaatagtttcctaatgttt 18561115  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18561114 aacggggtctcacagttaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18561015  T
Q  223 tgcctt 228  Q
    ||||||    
T  18561014 tgcctt 18561009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 15148349 - 15148144
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  15148349 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaagaatagtttccttatgttt 15148250  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||| || |||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  15148249 aacggggtctcacaattaagttatacttaatgttcaatcaaacggactaactattctaggaactttattattttgaaacaaaacaaactcaataaagaaa 15148150  T
Q  223 tgcctt 228  Q
    ||||||    
T  15148149 tgcctt 15148144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 15152650 - 15152445
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||  |||||||    
T  15152650 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccgtatgttt 15152551  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  15152550 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggaactttattattttgaaacaaaacaaactcaataaagaaa 15152451  T
Q  223 tgcctt 228  Q
    ||||||    
T  15152450 tgcctt 15152445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 12751033 - 12750828
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  12751033 atcatcagtctatccacataatagtctctatgctttaatgatatccaacttctcaataaagcttgactacggatactttaagaatagtttctttatgttt 12750934  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || | ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12750933 aacgaggtctcacaattaagttatacttaatgtttcattaaacggactaactattctagggactttattactttgaaacaaaacaaaatcaataaagaaa 12750834  T
Q  223 tgcctt 228  Q
    ||||||    
T  12750833 tgcctt 12750828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 27 - 224
Target Start/End: Complemental strand, 12738739 - 12738542
Alignment:
Q  27 tcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatg 126  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||      
T  12738739 tcagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaagaatagtttccttatgtttaaca 12738640  T
Q  127 gggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 224  Q
     |||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12738639 aggtctcacaattaagttataattaatgtttcattaaacaaactaactattctagggactttattattttgaaacaaaataaaatcaataaagaaatg 12738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 18257842 - 18258047
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||| |||| | |||||||||||| ||||| ||| || ||||| ||||  ||| ||| ||||||||| |||||||| |||||| | || || |||||    
T  18257842 atcatcaatctatccacataatagtctttatgcattattgttatcctacttaacaaaaaaacttgactacggatactttaagaataatgtccttgtgttt 18257941  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18257942 aatggggtctcacaattaagtcatacttaatgttccattaaacagactaattattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18258041  T
Q  223 tgcctt 228  Q
    ||||||    
T  18258042 tgcctt 18258047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 42 - 224
Target Start/End: Complemental strand, 13392338 - 13392157
Alignment:
Q  42 aatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaattaa 141  Q
    ||||||||||||| ||||||| ||||||  ||| |||||||| |||||||  |||||||| |||||| | || ||   ||||||||| |||||| |||||    
T  13392338 aatagtctctatgttttaatgttatcccttttcacaataaagtttgactattgatactttaagaataatgtcctttcatttaatggg-tctcacgattaa 13392240  T
Q  142 gttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 224  Q
    || | |||||||| |||||||| |||||||| | ||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  13392239 gtcacacttaatgctccattaagcagactaattgttctaggaactttattattttgaaacaaaacaaagtcaacaaagaaatg 13392157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 23 - 208
Target Start/End: Complemental strand, 2365101 - 2364917
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||| ||| |||| |||||||||||| ||||||| |||| || ||| |||||| | ||||||||  ||| ||| |||||| | |||||  ||||    
T  2365101 atcatcagtcgacccacatgatagtctctatgttttaatgttatctcatttcacaataagg-ttgactacgaatattttaagaataatgtcatttagttt 2365003  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaa 208  Q
    |||||| |||||| ||||||  | |||||||||||||||| | ||||||| |||||||| |||||||||||||||||||| |||||    
T  2365002 aatgggttctcacgattaagccacacttaatgttccattagaaagactaattattctagagactttattattttgaaacataacaa 2364917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 2653275 - 2653332
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacat 323  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2653275 catgatacaaagccaatcccaatcaatatagattggctattagggcttattccaacat 2653332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 12738499 - 12738442
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacat 323  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12738499 catgatacaaagccaaacccaatcaatatagattggctattagggcttactccaacat 12738442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 38 - 197
Target Start/End: Complemental strand, 7396381 - 7396221
Alignment:
Q  38 acataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaa 137  Q
    ||||||||||||||||||||||||   |||  | ||| || ||| ||||||||||| ||  ||| |||||| |||  ||||||||||| ||||||||  |    
T  7396381 acataatagtctctatgctttaatatcatcgtatttcacactaaggcttgactacatatgttttaagaataattttcttatgtttaatagggtctcaaga 7396282  T
Q  138 ttaagttatacttaatgttcca-ttaaacagactaactattctagggactttattattttg 197  Q
    |||||| ||||||||||||||| |||||   |||||||||||||| ||| || ||||||||    
T  7396281 ttaagtcatacttaatgttccatttaaatgaactaactattctagcgacatttttattttg 7396221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 11543223 - 11543279
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11543223 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 11543279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 224
Target Start/End: Complemental strand, 39111905 - 39111819
Alignment:
Q  137 attaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 224  Q
    |||||||  ||||||||||| |||||||| ||||  ||||||||||||||||||| |||||||| |||||||||| ||||||||||||    
T  39111905 attaagtcgtacttaatgtttcattaaacggactcgctattctagggactttatt-ttttgaaataaaacaaaattaataaagaaatg 39111819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 11536305 - 11536361
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  11536305 catgatacaaagccaaaaccaatcaatatagagtggctattagggcttattccaaca 11536361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 12750789 - 12750733
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  12750789 catgatacaaagccaaacccaatcaatatagattagctattagggcttactccaaca 12750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 15152406 - 15152350
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  15152406 catgatacaaaaccaaacccaatcaatatagattggctattagggcttactccaaca 15152350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 29327745 - 29327690
Alignment:
Q  267 atgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  29327745 atgatacaaaaccaaacccaatcaatatagattggctattagggcttactccaaca 29327690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 15148105 - 15148049
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||||||| |||||||    
T  15148105 catgatacaaaaccaaacccaattaatatagattggctattagggcttactccaaca 15148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 156
Target Start/End: Complemental strand, 3132789 - 3132748
Alignment:
Q  115 ttatgtttaatggggtctcacaattaagttatacttaatgtt 156  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  3132789 ttatgtttaatggggtctcacaattaagttacacttaatgtt 3132748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 180
Target Start/End: Complemental strand, 10234278 - 10234179
Alignment:
Q  81 aagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattcta 180  Q
    |||||||||||||  || ||| | | |||| || |||||||||||||  |||||  ||||||||||| |||||| | |||||||| ||||||||||||||    
T  10234278 aagcttgactacatttattttaatattagtgtctttatgtttaatggaatctcatgattaagttatatttaatggttcattaaacggactaactattcta 10234179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 13392085 - 13392030
Alignment:
Q  267 atgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    ||||| ||||| ||||| ||||||||||||||||| |||||||||||| |||||||    
T  13392085 atgatacaaagtcaaacacaatcaatatagattggatattagggcttactccaaca 13392030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 2653207 - 2653239
Alignment:
Q  198 aaacaaaacaaaatcaataaagaaatgccttgt 230  Q
    |||||||||||||||||||||||||||||||||    
T  2653207 aaacaaaacaaaatcaataaagaaatgccttgt 2653239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 18258087 - 18258143
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||| |||||| ||||||||| |||||||||||| |||||||| |||||||    
T  18258087 catgatacaaggccaaaaccaatcaatctagattggctatcagggcttactccaaca 18258143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 29983045 - 29982995
Alignment:
Q  151 aatgttccattaaacagactaactattctagggactttattattttgaaac 201  Q
    |||||||||||||||||| ||||| |||||  |||||||||| ||||||||    
T  29983045 aatgttccattaaacagattaactgttctaaagactttattactttgaaac 29982995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 24695466 - 24695673
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24695466 atcatcagtctacctacataatagtctctatgctttattgatatctcacttctcaataaagcttgactacggatacttttagaatagtttcattatgttt 24695565  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695566 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 24695665  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  24695666 tgccttgt 24695673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 18569863 - 18570070
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||    
T  18569863 atcatcagtctaccaacataatagtctttatgctttaatgatattccacttctcaataaagcttgactacggatactttaagagtagtttccttatgttt 18569962  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18569963 aacggggtctcacaattaagttatacttaatgttcaattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18570062  T
Q  223 tgccttgt 230  Q
    || |||||    
T  18570063 tgtcttgt 18570070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 19714498 - 19714703
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||| ||||||| ||| ||||||||    
T  19714498 atcatcagtctacccacataatagtctctatgctttaatgatatcctacttctcaataaagcttgacttcggatattttaagaatagattccttatgttt 19714597  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  19714598 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattactttgaaataaaacaaaatcaataaagaaa 19714697  T
Q  223 tgcctt 228  Q
    ||||||    
T  19714698 tgcctt 19714703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 19707218 - 19707419
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||| ||||||| ||| ||||||||    
T  19707218 atcatcagtctacccacataatagtctctatgctttaatgatatcctacttctcaataaagcttgacttcggatattttaagaatagattccttatgttt 19707317  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  19707318 aacggggtctcacaattaagttatacttaatgttccattaaactgactaactattctagggactttattactttgaaataaaacaaaatcaataaagaaa 19707417  T
Q  223 tg 224  Q
    ||    
T  19707418 tg 19707419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 42 - 225
Target Start/End: Original strand, 27347497 - 27347679
Alignment:
Q  42 aatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaattaa 141  Q
    ||||||||||||||||||||| ||||||  ||| |||||||||||||||||| ||||||| |||||| | || ||  |||||||||| |||||| |||||    
T  27347497 aatagtctctatgctttaatgttatcccttttcacaataaagcttgactacatatactttaagaataatgtcctttcgtttaatggg-tctcacgattaa 27347595  T
Q  142 gttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgc 225  Q
    || | |||||||| ||||||||||||| ||| ||||||| |||||||||||||||||| |||||||||||||| ||||||||||    
T  27347596 gtcacacttaatgctccattaaacagattaattattctaaggactttattattttgaatcaaaacaaaatcaacaaagaaatgc 27347679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 22547016 - 22547217
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||| ||||| | ||||||||||||||||  ||||||| |||| |||||| |||||||| |||||| |  ||||||| | |||| | ||  ||| |||    
T  22547016 atcatcggtctatccacataatagtctctatattttaatgttatctcacttcacaataaagtttgactgcgaatactttaaaaataatgtccatatattt 22547115  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||| | |||||| ||||||||||||||||||||||||||||| ||||||||||| ||| |  ||||||||||| ||| |||||||||| |||||| |||    
T  22547116 aatgagatctcacgattaagttatacttaatgttccattaaaccgactaactattatagcggttttattattttaaaataaaacaaaatgaataaataaa 22547215  T
Q  223 tg 224  Q
    ||    
T  22547216 tg 22547217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 45 - 226
Target Start/End: Original strand, 17285754 - 17285935
Alignment:
Q  45 agtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaattaagtt 144  Q
    ||||| |||||||||||  ||||||| ||| |||||||| | |||||   ||||||| |||||| | |||||  ||||| | |||| |||| |||||||     
T  17285754 agtctatatgctttaatactatcccaattcacaataaagatcgactatgaatactttaagaataatgtcatttagtttactagggtttcacgattaagtc 17285853  T
Q  145 atacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcc 226  Q
    | |||||||||||||||||||||||||||||||||  |||  |||||||||||||||| ||||||||||||||| |||||||    
T  17285854 acacttaatgttccattaaacagactaactattctctggagattattattttgaaacataacaaaatcaataaataaatgcc 17285935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 39538071 - 39537962
Alignment:
Q  121 ttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 220  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  || |||||||||| |||||| |  |||||||||||||||||||||| ||||||    
T  39538071 ttaatgaggtctcacaattaagttatacttaatgttccattaaacgaaccaactattctaaggacttaaccattttgaaacaaaacaaaatcattaaaga 39537972  T
Q  221 aatgccttgt 230  Q
    |||| |||||    
T  39537971 aatggcttgt 39537962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 18807034 - 18807175
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagt-ttcattatgtt 121  Q
    ||||||||||||||  ||||||||||||||||||||| || ||||  ||||| |||||| ||||||||| ||||||||| |||||| | | |||||| ||    
T  18807034 atcatcagtctacccgcataatagtctctatgctttattgttatcttacttcacaataacgcttgactatagatactttaagaataatgtccattat-tt 18807132  T
Q  122 taatggggtctcacaattaagttatacttaatgttccattaaa 164  Q
    |||||| ||||||| ||||||| | ||||||||||||||||||    
T  18807133 taatggtgtctcacgattaagtcacacttaatgttccattaaa 18807175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 45 - 226
Target Start/End: Original strand, 17298907 - 17299088
Alignment:
Q  45 agtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaattaagtt 144  Q
    ||||| |||||||||||  ||||||||||  |||||||| | |||||   ||||||| |||||| | |||||  ||||| | |||| |||| |||||||     
T  17298907 agtctatatgctttaatactatcccacttaacaataaagatcgactatgaatactttaagaataatgtcatttagtttactagggtttcacgattaagtc 17299006  T
Q  145 atacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcc 226  Q
      ||||||||||||||||| | |||||||||||||  |||  |||||||||  ||||| ||||||||||||||| |||||||    
T  17299007 gcacttaatgttccattaatcggactaactattctctggatattattatttataaacataacaaaatcaataaataaatgcc 17299088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 24695709 - 24695765
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695709 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 24695765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 121 - 224
Target Start/End: Complemental strand, 31886640 - 31886537
Alignment:
Q  121 ttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 220  Q
    ||||||| ||||||| |||||||  ||||| |||||| ||||||   ||||| ||||||| ||||||||||| |||||||||||||||||||| ||||||    
T  31886640 ttaatggagtctcacgattaagtcgtacttgatgttcaattaaatgaactaattattctaaggactttattaatttgaaacaaaacaaaatcactaaaga 31886541  T
Q  221 aatg 224  Q
    ||||    
T  31886540 aatg 31886537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 110
Target Start/End: Complemental strand, 39538793 - 39538708
Alignment:
Q  25 catcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagt 110  Q
    |||||||||||| ||||||||||||  ||||||||||||||||||||||| ||||||||||| ||||  |||| ||| ||||||||    
T  39538793 catcagtctacccacataatagtcttcatgctttaatgatatcccacttcacaataaagcttaactatggatattttaagaatagt 39538708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 19714742 - 19714798
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  19714742 catgatacaaagccaaacccaatcaatatagattggctattagggcttactccaaca 19714798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 19707462 - 19707518
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  19707462 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 19707518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 27347722 - 27347778
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27347722 catgatacaaagccaaacgcaatcaatatagattggctattagggcttactccaaca 27347778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 115 - 204
Target Start/End: Original strand, 33477390 - 33477479
Alignment:
Q  115 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaa 204  Q
    ||||| |||||| |||||||| ||||  | | |||||||| |||||||| ||| ||||||||| || |||||||||||||||||||||||    
T  33477390 ttatgattaatgaggtctcacgattagatcacacttaatgatccattaatcagcctaactattgtaaggactttattattttgaaacaaa 33477479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 18570108 - 18570156
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggctta 314  Q
    |||||| |||||||||||||||| |||||||||| |||||||| |||||    
T  18570108 catgatacaaagccaaacccaattaatatagattagctattagagctta 18570156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 39537925 - 39537870
Alignment:
Q  267 atgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    ||||| |||||| |||| || |||| |||||||||||||||||||||| |||||||    
T  39537925 atgatacaaagctaaactcagtcaacatagattggctattagggcttaatccaaca 39537870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 11479486 - 11479420
Alignment:
Q  115 ttatgtttaatg-gggtctcacaattaagttatacttaatgttccattaaacagactaactattcta 180  Q
    |||||||||||| |||||||||||| |||| | ||||||| || ||||||||| ||||| |||||||    
T  11479486 ttatgtttaatgagggtctcacaatcaagtcacacttaatatttcattaaacacactaattattcta 11479420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 19926760 - 19926967
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  19926760 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 19926859  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926860 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 19926959  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  19926960 tgccttgt 19926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 10621333 - 10621540
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  10621333 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttgagaatagtttccttatgttt 10621432  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10621433 aatgggctctcacaattaagttatacttaatgttccattaaacggactaactattccagggactttattattttgaaacaaaacaaaatcaataaagaaa 10621532  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  10621533 tgccttgt 10621540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 26970670 - 26970463
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  26970670 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaatcttgactacggatactttgagaatagtttccttatgttt 26970571  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970570 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 26970471  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  26970470 tgccttgt 26970463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 55612890 - 55612683
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||    
T  55612890 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagagtagtttccttatgttt 55612791  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612790 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 55612691  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  55612690 tgccttgt 55612683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 5707527 - 5707320
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  5707527 atcatcagtctacctacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 5707428  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5707427 aatggggtctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 5707328  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  5707327 tgccttgt 5707320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 10628412 - 10628619
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  10628412 atcatcagtctacctacataatagtctctatgctttaataatatcccacttctcaataaagcttgactacagatactttgagaatagtttccttatgttt 10628511  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10628512 aatgggctctcacaattaagttatacttaatgttccattaaacggactaactattccagggactttattattttgaaacaaaacaaaatcaataaagaaa 10628611  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  10628612 tgccttgt 10628619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 26963847 - 26963640
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  26963847 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaatcttgactacggatactttgagaatagtttccttatgttt 26963748  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963747 aatggggtctcacaattaagttatatttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 26963648  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  26963647 tgccttgt 26963640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 28393134 - 28393339
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  28393134 atcatcagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaagaatagtttccttatgttt 28393233  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  28393234 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattttagggactttattattttgaaacaaatcaaaatcaataaagaaa 28393333  T
Q  223 tgcctt 228  Q
    ||||||    
T  28393334 tgcctt 28393339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 5714155 - 5713948
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  5714155 atcatcagtctacctacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 5714056  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5714055 aatggggtctcacaattaagttatacttaatgttccattaaatgggctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 5713956  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  5713955 tgccttgt 5713948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 868804 - 868597
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||    
T  868804 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 868705  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  868704 aacggggtctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 868605  T
Q  223 tgccttgt 230  Q
    || |||||    
T  868604 tgtcttgt 868597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 18262419 - 18262214
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||| ||||||||||| ||||||||    
T  18262419 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgactacggatactttgagaatagtttccttatgttt 18262320  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18262319 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacgaaacaaaatcaataaagaaa 18262220  T
Q  223 tgcctt 228  Q
    ||||||    
T  18262219 tgcctt 18262214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 4426604 - 4426808
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| | ||||||||    
T  4426604 atcatcagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagttcc-ttatgttt 4426702  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4426703 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaa 4426802  T
Q  223 tgcctt 228  Q
    ||||||    
T  4426803 tgcctt 4426808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 18269280 - 18269070
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||| ||||||||||| ||||||||    
T  18269280 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgactacggatactttgagaatagtttccttatgttt 18269181  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaac-----aaaatcaataa 217  Q
    || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     |||||||||||    
T  18269180 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaacaaaatcaataa 18269081  T
Q  218 agaaatgcctt 228  Q
    |||||||||||    
T  18269080 agaaatgcctt 18269070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 23 - 218
Target Start/End: Complemental strand, 8845410 - 8845215
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  8845410 atcatcagcctacccacataatagtctctatgctttaatgatatccgacttctcaataaagcttgactacggatactttaagaatagtttccttatgttt 8845311  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 218  Q
    || ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8845310 aacgggatctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 8845215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 23 - 218
Target Start/End: Complemental strand, 8858374 - 8858179
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  8858374 atcatcagcctacccacataatagtctctatgctttaatgatatccgacttctcaataaagcttgactacggatactttaagaatagtttccttatgttt 8858275  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 218  Q
    || ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8858274 aacgggatctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 8858179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 222
Target Start/End: Complemental strand, 20311499 - 20311299
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||| |||||| ||| |||||||||||||||||||||||||| |||||| |||||||||||||| ||| ||||||| | || ||| || ||||||||    
T  20311499 atcatcaatctacccacaaaatagtctctatgctttaatgatatctcacttcacaataaagcttgacaacaaatactttaaaaacagtgtccttatgttt 20311400  T
Q  123 aatggggtctcacaattaagttata-cttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaa 221  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||| | |||||||| || | ||||||||||||| ||||||||||||||||||||||||    
T  20311399 aatggggtctcacaattaagttataccttaatgctccattgaacatattaactattataagtactttattattttaaaacaaaacaaaatcaataaagaa 20311300  T
Q  222 a 222  Q
    |    
T  20311299 a 20311299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 115 - 230
Target Start/End: Complemental strand, 12357251 - 12357136
Alignment:
Q  115 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaa 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357251 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaa 12357152  T
Q  215 taaagaaatgccttgt 230  Q
    ||||||||||||||||    
T  12357151 taaagaaatgccttgt 12357136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 10677555 - 10677753
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| |||||||||||| ||| |||||||| |||| || ||| |  |||||||||||||| |||||||| |||||| | |||||  ||||    
T  10677555 atcatcagtctacccacataatagtctatatactttaatgttatctcatttcac--taaagcttgactacggatactttaagaataatatcatttcgttt 10677652  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||||| |||| | ||||||| |||||||||| ||||||| ||||||||| |||| ||||| ||||||| | ||||||||||| |||||||||||| |||    
T  10677653 aatggg-tctcgcgattaagtcatacttaatgctccattatacagactaattattttaggggctttattttattgaaacaaaagaaaatcaataaaaaaa 10677751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 10891195 - 10891393
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| |||||||||||| ||| |||||||| |||| || ||| |  |||||||||||||| |||||||| |||||| | |||||  ||||    
T  10891195 atcatcagtctacccacataatagtctatatactttaatgttatctcatttcac--taaagcttgactacggatactttaagaataatatcatttcgttt 10891292  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||||| |||| | ||||||| |||||||||| ||||||| ||||||||| |||| ||||| ||||||| | ||||||||||| |||||||||||| |||    
T  10891293 aatggg-tctcgcgattaagtcatacttaatgctccattatacagactaattattttaggggctttattttattgaaacaaaagaaaatcaataaaaaaa 10891391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 5668125 - 5668327
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagata--cttttagaatagtttcattatgt 120  Q
    |||||| ||||| | ||||||||||||||||| ||||||| |||| |  ||| |||||||||||||||||| |||  |||| |||||| | || ||   |    
T  5668125 atcatcggtctatccacataatagtctctatgatttaatgttatctcttttcacaataaagcttgactacaaatatactttaagaataatgtcctttcat 5668224  T
Q  121 ttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaaga 220  Q
    |||||||| |||||| ||||| | | |||||||| ||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||| |||||    
T  5668225 ttaatggg-tctcacgattaaatcacacttaatgctccattaaatagactaattattctagagactttattattttgaaacaaaacaaaatcaacaaaga 5668323  T
Q  221 aatg 224  Q
    ||||    
T  5668324 aatg 5668327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 24 - 228
Target Start/End: Complemental strand, 5616421 - 5616215
Alignment:
Q  24 tcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagc--ttgactacagatacttttagaatagtttcattatgtt 121  Q
    |||||| ||||| |||||||||||||| |||||||| | |||||||| |||  |||||| |  ||||| || |||||||| |||||| | || |   |||    
T  5616421 tcatcaatctacatacataatagtctcaatgctttattaatatcccaattcataataaaacctttgacaacggatactttaagaataatgtcctctagtt 5616322  T
Q  122 taatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaa 221  Q
    ||| ||| |||||  ||| ||| | |||||||||||||  ||| ||||||| |||| |||| |||||||||||||||||||||||||||| |||||||||    
T  5616321 taacgggatctcatgatttagtcagacttaatgttccaagaaatagactaattattttaggaactttattattttgaaacaaaacaaaatgaataaagaa 5616222  T
Q  222 atgcctt 228  Q
    |||||||    
T  5616221 atgcctt 5616215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 35223767 - 35223576
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||| ||||||| |||||||||||| |||||||||||| |||||   ||  |||||||||||||||||  ||||||| |||||| | || ||  ||||    
T  35223767 atcatccgtctacccacataatagtctatatgctttaatgttatccttttttacaataaagcttgactacgaatactttaagaataatgtcctttcgttt 35223668  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
     | |          ||||||| | |||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  35223667 tacg----------attaagtcacacttaatgctccattaaacagactaattattctagggactttattattttaaaacaaaacaaaatcaacaaagaaa 35223578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 204
Target Start/End: Original strand, 21454137 - 21454319
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||| |||||  |||||||| ||| ||||| ||| || |||| || ||| |||||||| ||||||| ||||| ||| | |||| | |||||||  ||    
T  21454137 atcatcaatctactcacataataatctttatgcattattgttatctcatttcacaataaagtttgactatagatattttaaaaataatgtcattataatt 21454236  T
Q  123 aatggggtctcacaattaagttatactt-aatgttccattaaacagactaactattctagggactttattattttgaaacaaa 204  Q
    ||||||||||||  ||||||| | | || ||||||||||||| || ||||||||||||| | ||||||||| |||||||||||    
T  21454237 aatggggtctcaatattaagtcacattttaatgttccattaatcaaactaactattctaagaactttattactttgaaacaaa 21454319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 19927003 - 19927060
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacat 323  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19927003 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 19927060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 5713912 - 5713856
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5713912 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 5713856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 26963604 - 26963548
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963604 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 26963548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 26970427 - 26970371
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970427 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 26970371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 5707284 - 5707228
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5707284 catgatacaaagccaaacacaatcaatatagattggctattagggcttattccaaca 5707228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 10621576 - 10621632
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10621576 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 10621632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 12357100 - 12357044
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  12357100 catgatacaaagccaaatccaatcaatatagattggctattagggcttattccaaca 12357044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 868561 - 868507
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaa 320  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  868561 catgatacaaagccaaacccaatcaatatagattggctattagggtttattccaa 868507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 17142372 - 17142429
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacat 323  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  17142372 catgatacaaagtcaaacccaatcaatatagattggctattagggctttttccaacat 17142429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 10628655 - 10628711
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  10628655 catgatacaaagtcaaaaccaatcaatatagattggctattagggcttattccaaca 10628711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 55612650 - 55612594
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  55612650 catgatacaaagccaaacccaatcaatatagattggttattagggcttattctaaca 55612594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 4426847 - 4426905
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacatt 324  Q
    |||||| || |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  4426847 catgatacagagccaaacccaatcaatatagattggctattaggacttactccaacatt 4426905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 268 - 322
Target Start/End: Original strand, 28393380 - 28393434
Alignment:
Q  268 tgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  28393380 tgatacaaagtcaaacccaatcaatatagattggctattagggcttactccaaca 28393434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 18269032 - 18268976
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  18269032 catgatacaaagccaaacccattcaacatagattggctatttgggcttattccaaca 18268976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 192
Target Start/End: Complemental strand, 56516255 - 56516094
Alignment:
Q  31 tctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagt-ttcattatgtttaatgggg 129  Q
    |||||||||||||||||||||||| ||||||  ||||    ||| |||||||||||||||| ||||||||  |||||| | |||  |||| ||||||  |    
T  56516255 tctacctacataatagtctctatgttttaatactatcgttattcacaataaagcttgactatagatacttcaagaataatgttctatatg-ttaatgaag 56516157  T
Q  130 tctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttatta 192  Q
    |||||||||||||| | | |||||||| |||||  |  || | |||||||| |||||||||||    
T  56516156 tctcacaattaagtcacaattaatgtttcattactctaaccatctattctaaggactttatta 56516094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 181
Target Start/End: Original strand, 39074279 - 39074346
Alignment:
Q  115 ttatgtttaatggggtctcacaattaagttatacttaatgttcca-ttaaacagactaactattctag 181  Q
    ||||||||||||||||||||  ||||||| ||||||||||||| | |||||| |||||| ||||||||    
T  39074279 ttatgtttaatggggtctcatgattaagtcatacttaatgttcaatttaaacggactaattattctag 39074346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 315
Target Start/End: Complemental strand, 55992729 - 55992680
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttat 315  Q
    |||||| ||||| ||||||||||||||| | |||||||||||||||||||    
T  55992729 catgatacaaagtcaaacccaatcaatacaaattggctattagggcttat 55992680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 11161913 - 11161972
Alignment:
Q  121 ttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattcta 180  Q
    ||||||| ||||||||||||||| | ||||  ||||||||||||| || |||||||||||    
T  11161913 ttaatggagtctcacaattaagtcacactttgtgttccattaaactgattaactattcta 11161972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 39074218 - 39074269
Alignment:
Q  41 taatagtctctatgctttaatgatatcccacttctcaataaagcttgactac 92  Q
    |||||||||| |||||||||||||||| |||||| ||||||||  |||||||    
T  39074218 taatagtctccatgctttaatgatatctcacttcacaataaagtatgactac 39074269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 192
Target Start/End: Original strand, 30040750 - 30040919
Alignment:
Q  24 tcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatac-ttttagaatagt-ttcattatgtt 121  Q
    |||||||||||  |||||||||||||| |||||||| |  ||||||| |||  | ||| ||||||||| |||||| ||| |||||||| ||| ||||| |    
T  30040750 tcatcagtctatatacataatagtctcgatgctttattattatcccaattcatattaacgcttgactatagatacatttaagaatagtgttctttatg-t 30040848  T
Q  122 taatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttatta 192  Q
    |||||   |||||  ||||||| | ||||||| | | |||| ||  |||| |||||||||| |||||||||    
T  30040849 taatgtaatctcatgattaagtcacacttaatatactattacacgaactatctattctaggaactttatta 30040919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 5668371 - 5668412
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctatta 307  Q
    |||||| |||| |||||| |||||||||||||||||||||||    
T  5668371 catgatacaaaaccaaacacaatcaatatagattggctatta 5668412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 8845166 - 8845118
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggctta 314  Q
    |||||| ||||| ||||| ||||||| ||||||||||||||||| ||||    
T  8845166 catgatacaaagtcaaactcaatcaacatagattggctattaggactta 8845118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 8858130 - 8858082
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggctta 314  Q
    |||||| ||||| ||||| ||||||| ||||||||||||||||| ||||    
T  8858130 catgatacaaagtcaaactcaatcaacatagattggctattaggactta 8858082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 18262176 - 18262136
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctatt 306  Q
    |||||| |||||||||||||| |||| ||||||||||||||    
T  18262176 catgatacaaagccaaacccattcaacatagattggctatt 18262136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 18252237 - 18252030
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  18252237 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 18252138  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252137 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18252038  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  18252037 tgccttgt 18252030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 27131409 - 27131616
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  27131409 atcatcagtctacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacaaatactttgagaatagtttccttatgttt 27131508  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131509 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 27131608  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  27131609 tgccttgt 27131616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 18532514 - 18532721
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||    
T  18532514 atcatcagtctatctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 18532613  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532614 aatggggtctcacaattaagttatacttaatgttccattaaacgaactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18532713  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  18532714 tgccttgt 18532721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 16359035 - 16359240
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||  | |||||| ||||||||||| ||||||||    
T  16359035 atcatcagtctacccacataatagtctctatgctttaatgatattccatttctcaataaagcttgactagggttactttaagaatagtttccttatgttt 16359134  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16359135 aacggggtctcacaattaagttattcttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 16359234  T
Q  223 tgcctt 228  Q
    ||||||    
T  16359235 tgcctt 16359240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 27310577 - 27310782
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| |||||||     
T  27310577 atcatcagtctacccacataatagtctctatgctttaatgatattccacttctcaataaagcttgactactgatactttaagaatagtttccttatgttc 27310676  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || | |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27310677 aacgtggtctcacaattaagttatacttaatgttccattaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaa 27310776  T
Q  223 tgcctt 228  Q
    ||||||    
T  27310777 tgcctt 27310782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 21171233 - 21171438
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||     
T  21171233 atcatcagtctacccacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgttc 21171332  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||| |||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21171333 aacggggtctcacaattaagttatatttaatgttccatgaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaa 21171432  T
Q  223 tgcctt 228  Q
    ||||||    
T  21171433 tgcctt 21171438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 36816633 - 36816834
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||| |||||| | || ||||||||    
T  36816633 atcatcagtctatccacataatagtctctatgctttaatggtatcccacttctcaataaagcttgactatggatactttaagaataatgtccttatgttt 36816732  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || || ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36816733 aacggagtctcacaattaatttatacttaatgttccattaaacagacgaactattctagggacttcattattttgaaacaaaacaaaatcaataaagaaa 36816832  T
Q  223 tg 224  Q
    ||    
T  36816833 tg 36816834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 3855919 - 3856126
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| || |||||||||| |||||||||| |||||||||||| |||||||| ||||||||| ||| ||| |||||| | || ||||||||    
T  3855919 atcatcagtctacccacgtaatagtctccatgctttaataatatcccacttcacaataaagtttgactacaaatattttaagaataatgtccttatgttt 3856018  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||| || |||||||    
T  3856019 aatggggtctcacaattaagttatacttaatgttccattaaacgggctaactattctagggactttgttattttgaaacaaaacaaaataaacaaagaaa 3856118  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  3856119 tgccttgt 3856126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 22657221 - 22657429
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||| | |||| ||||||||||||||||||||||||| || |||  ||||||||||||||| ||| ||||| ||||| || || ||||||||    
T  22657221 atcatcagtctatccacatgatagtctctatgctttaatgatatctcatttcagaataaagcttgactagagacactttaagaattgtgtccttatgttt 22657320  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaac-aaaatcaataaagaa 221  Q
    || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  22657321 aaaggggtctcacaattaagttatatttaatgttccattaaacagactaactattctaggaactttattattttgaaacaaaacaaaaatcaataaagaa 22657420  T
Q  222 atgccttgt 230  Q
    ||| |||||    
T  22657421 atgtcttgt 22657429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 27277557 - 27277756
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||| ||||||| ||||||||||||||||||||||||| ||||||  ||| ||||||||| ||||||| |||||||| |||||| | |||||  | ||    
T  27277557 atcatcggtctacccacataatagtctctatgctttaatgttatcccttttcacaataaagcctgactacggatactttaagaataatgtcatttcggtt 27277656  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||   |||||| | ||||||| | || ||||| ||| |||||  |||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||    
T  27277657 aa-aaggtctcgcgattaagtcacac-taatgctccgttaaatggactaattattctagggacgttattattttgaaacaaaacaaaaacaacaaagaaa 27277754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 12006539 - 12006712
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||   |||||| | |||||| | ||||||| |||||| |||| || ||| ||||||||||  ||  ||| | |||| | || ||||||||    
T  12006539 atcatcagtctatgcacataacaatctctaagttttaatgttatccctcttcacactaaggcttgactacgaatgttttaataataatgtccttatgttt 12006638  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattatttt 196  Q
     |||||||||||| ||||||  | ||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  12006639 catggggtctcacgattaaggcacacttaatattccattaaatagactaactattctagggactttattatttt 12006712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 12014284 - 12014457
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||| |||||| ||||||| |||| || ||||||||  |||||| |||| || |||||||| ||||| |||  ||| ||||||   |||||||||||    
T  12014284 atcatcattctacccacataatggtctttacgctttaatcgtatccctcttcacactaaagcttaactacggatgttttaagaataacatcattatgttt 12014383  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattatttt 196  Q
    |||||| ||| || ||||| ||| ||||||| ||||||||||| |||||  |||||||| ||||||||||||||    
T  12014384 aatgggatctaacgattaatttacacttaatattccattaaacggactatgtattctagtgactttattatttt 12014457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 23 - 218
Target Start/End: Original strand, 9917918 - 9918106
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||  ||||| ||||| || ||||||||||| |||| ||||||||||  ||||||||||| |||| ||||| ||| |||||| | || |||| |||    
T  9917918 atcatcaacctaccgacatagtattctctatgcttcaatgctatcccacttaacaataaagcttaactatagatattttaagaataatgtccttatattt 9918017  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 218  Q
    |||||  ||||   || |||||||||||||||||| |||||||| |||||       || ||||||||||||||| ||||||||||||||||||||    
T  9918018 aatgga-tctcgtgatcaagttatacttaatgttcgattaaacaaactaa------aagtgactttattattttgtaacaaaacaaaatcaataaa 9918106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 18251992 - 18251935
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacat 323  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18251992 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 18251935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 18532757 - 18532814
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacat 323  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532757 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 18532814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 27310821 - 27310877
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  27310821 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 27310877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 16359280 - 16359336
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||| || |||||||||||||||||||||||||||||||||| |||||||    
T  16359280 catgatacaaatcctaacccaatcaatatagattggctattagggcttactccaaca 16359336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 3403325 - 3403248
Alignment:
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaa 200  Q
    |||| ||||||||| |||||| | ||||||| ||||||||| ||||||||||||| ||  |||||||||| |||||||    
T  3403325 aatgtggtctcacatttaagtcacacttaatattccattaatcagactaactattttatagactttattactttgaaa 3403248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 123 - 200
Target Start/End: Original strand, 3443494 - 3443571
Alignment:
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaa 200  Q
    |||| ||||||||| |||||| | ||||||| ||||||||| ||||||||||||| ||  |||||||||| |||||||    
T  3443494 aatgtggtctcacatttaagtcacacttaatattccattaatcagactaactattttatagactttattactttgaaa 3443571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 21171479 - 21171535
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||| ||||| |||||||||||||||||| ||||| |||||||    
T  21171479 catgatacaaagccaaactcaatccatatagattggctattagagcttactccaaca 21171535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 22657472 - 22657521
Alignment:
Q  273 caaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    ||||||||||| ||||||||||| ||||||||||| |||||| |||||||    
T  22657472 caaagccaaactcaatcaatatatattggctattaaggcttactccaaca 22657521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 155 - 224
Target Start/End: Original strand, 30720625 - 30720694
Alignment:
Q  155 ttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatg 224  Q
    |||||||||||  ||||| ||||| ||| ||||||||||||| |||||||| |||| ||||||| |||||    
T  30720625 ttccattaaacgaactaattattccaggaactttattattttaaaacaaaataaaaccaataaaaaaatg 30720694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 36816885 - 36816926
Alignment:
Q  273 caaagccaaacccaatcaatatagattggctattagggctta 314  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  36816885 caaagccaaacccaatcaatatagattgaatattagggctta 36816926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 3856164 - 3856220
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||| ||||||||||||| || |||||||||||||||| || |||||||    
T  3856164 catgatacaaagtcaaacccaatcaagatggattggctattagggcctactccaaca 3856220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 27131652 - 27131704
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||||||||     ||||||||||||||||||||||||||||||    
T  27131652 catgatacaaagccaaacccaac----atagattggctattagggcttattccaaca 27131704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 27277800 - 27277856
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||| |||||  ||| || |||||||||||||||||||||| |||||||    
T  27277800 catgatacaaagtcaaacataattaacatagattggctattagggcttactccaaca 27277856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 188; Significance: 1e-102; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 6110271 - 6110064
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||    
T  6110271 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 6110172  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110171 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 6110072  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  6110071 tgccttgt 6110064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 10572592 - 10572799
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||    
T  10572592 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 10572691  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572692 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 10572791  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  10572792 tgccttgt 10572799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 16482483 - 16482688
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||||||    
T  16482483 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagagtagtttccttatgttt 16482582  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482583 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 16482682  T
Q  223 tgcctt 228  Q
    ||||||    
T  16482683 tgcctt 16482688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 17781118 - 17781319
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  17781118 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 17781217  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781218 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 17781317  T
Q  223 tg 224  Q
    ||    
T  17781318 tg 17781319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 18522870 - 18522665
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  18522870 atcatcagtctacctacataatagtctctatgcttaaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgttt 18522771  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522770 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18522671  T
Q  223 tgcctt 228  Q
    ||||||    
T  18522670 tgcctt 18522665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 15600884 - 15601091
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||    
T  15600884 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 15600983  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600984 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 15601083  T
Q  223 tgccttgt 230  Q
    || |||||    
T  15601084 tgtcttgt 15601091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 15607429 - 15607636
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||    
T  15607429 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 15607528  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607529 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 15607628  T
Q  223 tgccttgt 230  Q
    || |||||    
T  15607629 tgtcttgt 15607636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 181; E-Value: 9e-98
Query Start/End: Original strand, 23 - 227
Target Start/End: Complemental strand, 13211509 - 13211305
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||    
T  13211509 atcatcagtctacctacataatagtctctatgctttaatgatatctcacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 13211410  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211409 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 13211310  T
Q  223 tgcct 227  Q
    |||||    
T  13211309 tgcct 13211305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 13248814 - 13248607
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||  ||||||| ||||||||||| ||||||||    
T  13248814 atcatcagtctacctacataatagtctctatgctttaatgttatcccacttctcaacaaagcttgactacgaatactttgagaatagtttccttatgttt 13248715  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248714 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 13248615  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  13248614 tgccttgt 13248607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 19089745 - 19089946
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  19089745 atcatcagtctacctacataatagtctctatgatttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttcattatgttt 19089844  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19089845 aaaggggtctcacaattaagttatacttaatgttccattaaacggactaactaatctagggactttattattttgaaacaaaacaaaatcaataaagaaa 19089944  T
Q  223 tg 224  Q
    ||    
T  19089945 tg 19089946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 8490702 - 8490488
Alignment:
Q  23 atcatcagtctacctacataat-------agtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcat 115  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |    
T  8490702 atcatcagtctacctacataatcgtctgtagtctctatgctttaatgatatcccacttctcaacaaagcttgactacagatactttgagaatagtttcct 8490603  T
Q  116 tatgtttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaat 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490602 tatgtttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaat 8490503  T
Q  216 aaagaaatgccttgt 230  Q
    |||||||||||||||    
T  8490502 aaagaaatgccttgt 8490488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 15357586 - 15357793
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||    
T  15357586 atcatcagtctacctacataatagtctctatgttttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgttt 15357685  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15357686 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactaatctagggactttattattttgaaacaaaacaaaatcaataaagaaa 15357785  T
Q  223 tgccttgt 230  Q
    || |||||    
T  15357786 tgtcttgt 15357793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 10579355 - 10579556
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||    
T  10579355 atcatcagtctacctacataatagtctctatgctttaatgatatctcacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 10579454  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10579455 aatggggtctcacaattaagttatacttaatgttccatttaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 10579554  T
Q  223 tg 224  Q
    ||    
T  10579555 tg 10579556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 13517018 - 13516813
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||    
T  13517018 atcatcagtctacccacataatagtctctgtgctttaatgatatcctacttctcaataaagcttgactacagatactttaagaatcgtttccttatgttt 13516919  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13516918 aacggggtctcacaattaagttatacttaatgttccatgaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 13516819  T
Q  223 tgcctt 228  Q
    ||||||    
T  13516818 tgcctt 13516813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 18520182 - 18519980
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||   || ||||||||||| ||||||||    
T  18520182 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggat---ttaagaatagtttccttatgttt 18520086  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520085 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18519986  T
Q  223 tgcctt 228  Q
    ||||||    
T  18519985 tgcctt 18519980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 17200184 - 17200389
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||    
T  17200184 atcatcagtctacccacataatagtctctatgctttaatgatatcacacatctcaataaagcttaactacggatactttaagaatagtttcattatgttt 17200283  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17200284 aaaggggtatcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 17200383  T
Q  223 tgcctt 228  Q
    ||||||    
T  17200384 tgcctt 17200389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 32056900 - 32057101
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||||||| ||||||||    
T  32056900 atcattagtctacccacataatagtctctatgctttaatgatatcccacttctcaataaagtttgactacggacactttaagaatagtttctttatgttt 32056999  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || ||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32057000 aacggggtcttacaataaagttatacttgatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 32057099  T
Q  223 tg 224  Q
    ||    
T  32057100 tg 32057101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 23 - 211
Target Start/End: Original strand, 15342219 - 15342407
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||    
T  15342219 atcatcagtctacctacataatagtctctatgttttaatgatatcccacttctcaataaagcttgactacggatactttgagaataggttccttatgttt 15342318  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaat 211  Q
    |||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||    
T  15342319 aatggggtctcacaattaagttatacttaatgttccattaaacgaacaaactattctagggactttattattttgaaacaaaacaaaat 15342407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 23 - 224
Target Start/End: Original strand, 1647521 - 1647726
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||| | |||||||||||||||||||||||| |||||||  ||||||||||||||||| ||| |||||||| | ||||||||| ||||||||    
T  1647521 atcatcagtctatccacataatagtctctatgctttaattatatcccttttctcaataaagcttgattacggatactttaaaaatagtttccttatgttt 1647620  T
Q  123 aatggggtctcacaattaagtta----tacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 218  Q
    || ||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1647621 aacggggtctcacaattaagttaattatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 1647720  T
Q  219 gaaatg 224  Q
    ||||||    
T  1647721 gaaatg 1647726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 69 - 230
Target Start/End: Original strand, 18640792 - 18640953
Alignment:
Q  69 cacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaattaagttatacttaatgttccattaaacaga 168  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  18640792 cacttctcaataaagcttgactacggatactttgagaatagtttccttatgtttaatggggtctcacaattaagttatacttaatgttccattaaatgga 18640891  T
Q  169 ctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18640892 ctaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 18640953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 38 - 230
Target Start/End: Complemental strand, 29925163 - 29924971
Alignment:
Q  38 acataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaa 137  Q
    ||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||| |||||| | || |||| ||||||||||||||||||    
T  29925163 acataatagcctccatgctttaatgatatctcacttcacaataaagcttgactacatatattttaagaataatgtccttatatttaatggggtctcacaa 29925064  T
Q  138 ttaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 230  Q
    |||| |||||||||||  |||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  29925063 ttaaattatacttaataatccattaaacggactaactattttaggggctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 29924971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 38 - 230
Target Start/End: Complemental strand, 29974316 - 29974124
Alignment:
Q  38 acataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaa 137  Q
    ||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||| ||| ||| |||||| | || |||| ||||||||||||||||||    
T  29974316 acataatagcctccatgctttaatgatatctcacttcacaataaagcttgactacatatattttaagaataatgtccttatatttaatggggtctcacaa 29974217  T
Q  138 ttaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 230  Q
    |||| |||||||||||  |||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  29974216 ttaaattatacttaataatccattaaacggactaactattttaggggctttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 29974124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 42 - 228
Target Start/End: Complemental strand, 16200313 - 16200128
Alignment:
Q  42 aatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaattaa 141  Q
    ||||||||| ||||||||||||||||||||||| ||||||| |||||||||  ||||||| |||||| | || |||||||||||||||||||||||||||    
T  16200313 aatagtctccatgctttaatgatatcccacttcacaataaatcttgactacgaatactttaagaataatgtccttatgtttaatggggtctcacaattaa 16200214  T
Q  142 gttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 228  Q
    ||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||| |||  ||||||||||||    
T  16200213 gttatacataatgttccattaaacgaactaactattctaaggactttattattttgaaacaaaataaaa-caacgaagaaatgcctt 16200128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 42 - 228
Target Start/End: Complemental strand, 16200619 - 16200434
Alignment:
Q  42 aatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaattaa 141  Q
    ||||||||  |||||||||||| |||||||||| ||||||| |||||||||  ||||||| |||||| | || ||||||||| ||| |||||||||||||    
T  16200619 aatagtcttcatgctttaatgacatcccacttcacaataaatcttgactacgaatactttaagaataatgtccttatgtttattggagtctcacaattaa 16200520  T
Q  142 gttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 228  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||| |||  ||||||||||||    
T  16200519 gttatacataatgttccattaaacggactaactattctaaggactttattattttgaaacaaaataaaa-caacgaagaaatgcctt 16200434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 23 - 223
Target Start/End: Original strand, 24253388 - 24253589
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||| |||||||| ||||||||||||||||||||||||| || | |||||  |||||||  ||||| ||| ||||||| |||||||| || ||||||||    
T  24253388 atcattagtctaccgacataatagtctctatgctttaatgttacctcactttacaataaattttgaccacatatactttaagaatagtgtccttatgttt 24253487  T
Q  123 aatgggg-tctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaa 221  Q
     |||||| |||||| ||||||| |||||||||||||||| ||||  || | |||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  24253488 gatggggatctcacgattaagtcatacttaatgttccatcaaacgaacgagctattctaaggactttattattttgaagtaaaacaaaatcaataaagaa 24253587  T
Q  222 at 223  Q
    ||    
T  24253588 at 24253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 17136566 - 17136465
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  17136566 atcatcagtctacccacataatagtctctatgttttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgttt 17136467  T
Q  123 aa 124  Q
    ||    
T  17136466 aa 17136465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 18534819 - 18534758
Alignment:
Q  167 gactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 228  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18534819 gactaactattctatggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18534758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 6110028 - 6109972
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110028 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 6109972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 8490452 - 8490396
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8490452 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 8490396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 13248571 - 13248515
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248571 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 13248515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 13211267 - 13211211
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  13211267 catgatacaaaaccaaacccaatcaatatagattggctattagggcttattccaaca 13211211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 18640989 - 18641045
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18640989 catgatacaaagccaaacacaatcaatatagattggctattagggcttattccaaca 18641045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 10579604 - 10579653
Alignment:
Q  273 caaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10579604 caaagtcaaacccaatcaatatagattggctattagggcttattccaaca 10579653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 228
Target Start/End: Complemental strand, 18510969 - 18510924
Alignment:
Q  183 gactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510969 gactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 18510924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 17136193 - 17136137
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  17136193 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 17136137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 10572841 - 10572890
Alignment:
Q  273 caaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  10572841 caaagtcaaacccaatcaatataggttggctattagggcttattccaaca 10572890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 15607672 - 15607729
Alignment:
Q  266 catgatgcaaagccaaacccaatcaa-tatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||||||||| || |||||||||||||||||||||||||||||||    
T  15607672 catgatacaaagccaaacccaataaaatatagattggctattagggcttattccaaca 15607729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 17200434 - 17200483
Alignment:
Q  273 caaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  17200434 caaagccaaacccaatcaacatagattggctattagggcttactccaaca 17200483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 15351237 - 15351293
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  15351237 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaaca 15351293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 15357829 - 15357885
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  15357829 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaaca 15357885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 16482727 - 16482782
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  16482727 catgatacaaagccaaacccaatcaatatagattgg-tattagggcttattctaaca 16482782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 18519941 - 18519885
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||| |||||||||||||||||||||||||||||||| |||| |||||||    
T  18519941 catgatacaaaaccaaacccaatcaatatagattggctattaggacttactccaaca 18519885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 1647768 - 1647825
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacat 323  Q
    |||||| |||||||||||||||||||||||||   |||||||||||||| ||||||||    
T  1647768 catgatacaaagccaaacccaatcaatatagaccagctattagggcttactccaacat 1647825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 15601127 - 15601184
Alignment:
Q  266 catgatgcaaagccaaacccaatcaa-tatagattggctattagggcttattccaaca 322  Q
    |||||| |||| ||||||||||| || |||||||||||||||||||||||||||||||    
T  15601127 catgatacaaatccaaacccaataaaatatagattggctattagggcttattccaaca 15601184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 13516775 - 13516719
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| || |||||||| ||||||| |||||||||||||||||||||| |||||||    
T  13516775 catgatacacagccaaactcaatcaacatagattggctattagggcttactccaaca 13516719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 17781370 - 17781414
Alignment:
Q  278 ccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||||||||||||||||||||||| |||||||    
T  17781370 ccaaactcaatcaatatagattggctattagggcttactccaaca 17781414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 19089997 - 19090041
Alignment:
Q  278 ccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||||||||||||||||||||||| |||||||    
T  19089997 ccaaactcaatcaatatagattggctattagggcttactccaaca 19090041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 32057144 - 32057200
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||| ||||||||||||| |||||||||||||||| ||||| |||||||    
T  32057144 catgatacaaagtcaaacccaatcaacatagattggctattagagcttactccaaca 32057200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 18510885 - 18510829
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||  ||||| ||||||||||||||||| |||||||||||| |||||||    
T  18510885 catgatacaaaatcaaactcaatcaatatagattggatattagggcttactccaaca 18510829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 18522626 - 18522570
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||  ||||| ||||||||||||||||| |||||||||||| |||||||    
T  18522626 catgatacaaaatcaaactcaatcaatatagattggatattagggcttactccaaca 18522570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 18534719 - 18534671
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggctta 314  Q
    |||||| |||| |||||| |||||||||||||||| |||||||||||||    
T  18534719 catgatacaaaaccaaactcaatcaatatagattgactattagggctta 18534671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 29924935 - 29924879
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||| | ||||| |||||||||||||| | ||||||||||||| |||||||    
T  29924935 catgatacaatgtcaaactcaatcaatatagatcgactattagggcttactccaaca 29924879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 29974088 - 29974032
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||| | ||||| |||||||||||||| | ||||||||||||| |||||||    
T  29974088 catgatacaatgtcaaactcaatcaatatagatcgactattagggcttactccaaca 29974032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-100; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 16566320 - 16566525
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  16566320 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttaagaatagtttccttatgttt 16566419  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566420 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 16566519  T
Q  223 tgcctt 228  Q
    ||||||    
T  16566520 tgcctt 16566525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 29309097 - 29308890
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  29309097 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 29308998  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308997 aatgggctctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 29308898  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  29308897 tgccttgt 29308890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 29316057 - 29315850
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  29316057 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 29315958  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315957 aatgggctctcacaattaagttatacttaatgttccattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 29315858  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  29315857 tgccttgt 29315850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 17691440 - 17691647
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||    
T  17691440 atcatcagtctacctacataatagtctttatgctttaatgatatcccacttctcactaaagcttgactacggatactttaagaatagtttccttatgttt 17691539  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17691540 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaagaaaacaaaatcaataaagaaa 17691639  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  17691640 tgccttgt 17691647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 27381252 - 27381459
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||| |||||||||||  |||||||    
T  27381252 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactatggatactttgagaatagtttccatatgttt 27381351  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381352 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 27381451  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  27381452 tgccttgt 27381459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 27471635 - 27471842
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||| |||||||||||  |||||||    
T  27471635 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactatggatactttgagaatagtttccatatgttt 27471734  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471735 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 27471834  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  27471835 tgccttgt 27471842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 188977 - 189182
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  188977 atcatcagtctacccacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactacaaatactttaagaatagtttccttatgttt 189076  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  189077 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaa 189176  T
Q  223 tgcctt 228  Q
    ||||||    
T  189177 tgcctt 189182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 178; E-Value: 6e-96
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 17684469 - 17684674
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||| ||||||||||| ||||||||    
T  17684469 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcatcaaagcttgactacggatactttgagaatagtttccttatgttt 17684568  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684569 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 17684668  T
Q  223 tgcctt 228  Q
    ||||||    
T  17684669 tgcctt 17684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 11651930 - 11651725
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||| |||    
T  11651930 atcatcagtctacccacataatagtctctatgctttaatgatatctcacttctcaataaagcttgactactgatacttttagaatagtttccttattttt 11651831  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  11651830 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattttagggactttattattttgaaacaaatcaaaatcaataaagaaa 11651731  T
Q  223 tgcctt 228  Q
    ||||||    
T  11651730 tgcctt 11651725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 25537159 - 25537364
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||    
T  25537159 atcatcagtctacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacgaatactttaagaatagtttccttatgttt 25537258  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || ||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25537259 aacggggtctcacaataaagttatacttaatgttccattaaacggactaattattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 25537358  T
Q  223 tgcctt 228  Q
    ||||||    
T  25537359 tgcctt 25537364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 23 - 228
Target Start/End: Original strand, 13359269 - 13359474
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||| | | ||||||||||||| ||||||||| | ||||| ||| |||||||| |||||||| |||||||| | |||| | |  ||||||||    
T  13359269 atcatcagtctatccatataatagtctctacgctttaatgttgtcccatttcacaataaaggttgactacggatactttaaaaataatgtttttatgttt 13359368  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||| || |||| |||||||||||||||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  13359369 aatggagtttcacgattaagttatacttaatgctccattaagcgaactaactattctagggactttattattttgaaacaaaacaaaataaataaataaa 13359468  T
Q  223 tgcctt 228  Q
    ||||||    
T  13359469 tgcctt 13359474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 23 - 207
Target Start/End: Complemental strand, 27925961 - 27925772
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||| || | |||||||||||| | ||||| |||| ||| |||||||  ||||||| ||||||| ||||||||| |||||| |||  ||  ||||    
T  27925961 atcatcagtttatccacataatagtctttgtgcttcaatgctataccacttccaaataaagtttgactagagatactttaagaataattttctttagttt 27925862  T
Q  123 aatggggtctcacaattaagt--tatactta---atgttccattaaacagactaactattctagggactttattattttgaaacaaaaca 207  Q
    ||||| ||||||| |||||||   | |||||   ||||||| ||||||| ||||  ||||||| ||||||||||||||||||||||||||    
T  27925861 aatggagtctcacgattaagtcacacacttaattatgttccgttaaacatactagttattctaaggactttattattttgaaacaaaaca 27925772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 211
Target Start/End: Complemental strand, 8510115 - 8509941
Alignment:
Q  38 acataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatgggg-tctcaca 136  Q
    |||||||||||| |||| ||||||| |||| || |||  |||||||||| |||||| ||||||| | ||||   || | || |||||||||| ||||| |    
T  8510115 acataatagtctttatgttttaatgctatctcatttcataataaagcttaactacatatactttaataatatcatcctcatatttaatgggggtctcata 8510016  T
Q  137 attaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaat 211  Q
    |||||||  ||| ||||||||||| ||| ||||||| |||||||  |||||||||||||| |||||||| |||||    
T  8510015 attaagtcgtacataatgttccatcaaatagactaattattctatagactttattattttaaaacaaaataaaat 8509941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 191
Target Start/End: Original strand, 20553587 - 20553755
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| |||||| | ||| |||||||||||  |||| |||||| |||||||  || ||||| ||| |||| |||||| | |  |||| |||    
T  20553587 atcatcagtctaccaacataaaaatctttatgctttaattttatctcacttcacaataaaaattcactacggatgctttaagaataatattcttatattt 20553686  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttatt 191  Q
    |||||| |||||| |||||||  |||||||| || |||||||| ||||| |||| |||| |||||||||    
T  20553687 aatgggatctcacgattaagtcgtacttaatatttcattaaacggactagctatcctagagactttatt 20553755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 17691683 - 17691737
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaa 320  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691683 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaa 17691737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 27381502 - 27381551
Alignment:
Q  273 caaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381502 caaagccaaacccaatcaatatagattggctattagggcttattccaaca 27381551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 273 - 322
Target Start/End: Original strand, 27471885 - 27471934
Alignment:
Q  273 caaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471885 caaagccaaacccaatcaatatagattggctattagggcttattccaaca 27471934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 29308854 - 29308798
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29308854 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 29308798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 29315814 - 29315758
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29315814 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 29315758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 17850495 - 17850663
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| | |||||||||| ||| ||| |||| |||   ||||| ||| ||||||||||||  |||| ||| |||||||| || || | |||    
T  17850495 atcatcagtctacccatataatagtctatatacttgaatgttatttgacttcacaa-aaagcttgactatggataatttaagaatagtgtccttgttttt 17850593  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttatta 192  Q
    ||| || | ||||||||||||  ||| ||||||||||  ||||| |||| ||||| ||||||||||||||    
T  17850594 aattggatatcacaattaagtcttacataatgttccaacaaacaaactagctattatagggactttatta 17850663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 17684712 - 17684768
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  17684712 catgatacaaagccaaacccattcaacatagattggctattagggcttattccaaca 17684768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 268 - 322
Target Start/End: Complemental strand, 11651684 - 11651630
Alignment:
Q  268 tgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  11651684 tgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 11651630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 192
Target Start/End: Original strand, 20736604 - 20736773
Alignment:
Q  24 tcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatac-ttttagaatagt-ttcattatgtt 121  Q
    |||||||||||| |||||||||||||| | |||||| |  ||||||| |||| | |||||||||||||||||||| ||| |||||| | ||| ||||| |    
T  20736604 tcatcagtctacatacataatagtctcgacgctttattattatcccagttcttattaaagcttgactacagatacatttaagaataatgttctttatg-t 20736702  T
Q  122 taatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttatta 192  Q
    |||||   |||||  ||||||| | ||||||| | |||||| ||  |||| |||||||||| |||||||||    
T  20736703 taatgtaatctcatgattaagtcaaacttaatataccattacacgaactatctattctaggaactttatta 20736773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 25537405 - 25537461
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||| || ||||||||||||||||||||||||||| |||||||    
T  25537405 catgatacaaagccaaactcagtcaatatagattggctattagggcttaatccaaca 25537461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 31258065 - 31258120
Alignment:
Q  168 actaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaat 223  Q
    ||||| |||| ||| |||||||||||||||||||||||||||| ||||||||||||    
T  31258065 actaattattttagagactttattattttgaaacaaaacaaaagcaataaagaaat 31258120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 13359512 - 13359560
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggctta 314  Q
    |||||| ||||| |||||||||| |||||||||||||||||||| ||||    
T  13359512 catgatacaaagtcaaacccaatgaatatagattggctattaggactta 13359560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 16566563 - 16566611
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggctta 314  Q
    |||||| ||||| ||||| ||||||| ||||||||||||||||||||||    
T  16566563 catgatacaaagtcaaactcaatcaacatagattggctattagggctta 16566611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 189221 - 189282
Alignment:
Q  266 catgatgcaaagccaaacccaatcaata---tagattggctattagggcttattccaacatt 324  Q
    |||||| |||||||||||||||||||||   |||||||  |||||||||||| |||||||||    
T  189221 catgatacaaagccaaacccaatcaatatactagattgattattagggcttactccaacatt 189282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 28605931 - 28605854
Alignment:
Q  115 ttatgtttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttatta 192  Q
    |||| ||||| | |||||||||||| ||| | |||||| || |||||||||| | ||||||||||||  |||||||||    
T  28605931 ttatctttaacgaggtctcacaatttagtcacacttaaagtcccattaaacaaaataactattctagatactttatta 28605854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 184; Significance: 2e-99; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 1200 - 993
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  1200 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttgagaatagtttctttatgttt 1101  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1100 aatggggtctcacaattaagttatacttaatgtttcattaaacggactaactattttagggactttattattttgaaacaaaacaaaatcaataaagaaa 1001  T
Q  223 tgccttgt 230  Q
    || |||||    
T  1000 tgtcttgt 993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 957 - 900
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacat 323  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  957 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 184; Significance: 2e-99; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 6934 - 7141
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  6934 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 7033  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7034 aatagggtctcacagttaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 7133  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  7134 tgccttgt 7141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 13950 - 14157
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  13950 atcatcagtctacctacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacagatactttgagaatagtttccttatgttt 14049  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14050 aatggggtctcacagttaagttatacttaatgttccattaaacggactaactattgtagggactttattattttgaaacaaaacaaaatcaataaagaaa 14149  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  14150 tgccttgt 14157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 7177 - 7233
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  7177 catgatacaaaaccaaactcaatcaatatagattggctattagggcttattccaaca 7233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 14193 - 14249
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  14193 catgatacaaaaccaaactcaatcaatatagattggctattagggcttattccaaca 14249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 184; Significance: 2e-99; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 21940872 - 21940665
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  21940872 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 21940773  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21940772 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctaggaactttattattttgaaacaaaacaaaatcaataaagaaa 21940673  T
Q  223 tgccttgt 230  Q
    ||| ||||    
T  21940672 tgcattgt 21940665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 22171694 - 22171491
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||  |||||||    
T  22171694 atcatcagtctacctacataatagtctctatgctttaatgatattccacttctcaataaagcttgactacggatactttgagaatagtttc--tatgttt 22171597  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  22171596 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaataaaacaaaatcaataaggaaa 22171497  T
Q  223 tgcctt 228  Q
    ||||||    
T  22171496 tgcctt 22171491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 29 - 228
Target Start/End: Complemental strand, 28555084 - 28554885
Alignment:
Q  29 agtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggg 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28555084 agtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatacttttagaatagtttcattatgtttaatggg 28554985  T
Q  129 gtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 228  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| | |||||||||||||||| ||||||||||||||||||||||||||    
T  28554984 gtctcacaattaagttatacttaatgttccattaaacggactaactattttaggtattttattattttgaaactaaacaaaatcaataaagaaatgcctt 28554885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 6094330 - 6094129
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||    
T  6094330 atcatcactctacccatataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatactttaaaaatagtttccttatgttt 6094231  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6094230 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 6094131  T
Q  223 tg 224  Q
    ||    
T  6094130 tg 6094129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 23 - 224
Target Start/End: Complemental strand, 24642856 - 24642655
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  ||||||| ||||||||||| ||||||||    
T  24642856 atcatcagtctacccacataatagtctctatactttaatgatatctcacttctcaataaagcttgactacgaatactttaagaatagtttccttatgttt 24642757  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  24642756 aacggggtctcacaattaagttatacttaatgttccattaaacggactaacaattctagggactttatgattttgaaacaaaacaaaatcaataaagaaa 24642657  T
Q  223 tg 224  Q
    ||    
T  24642656 tg 24642655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 97 - 224
Target Start/End: Complemental strand, 24636987 - 24636860
Alignment:
Q  97 acttttagaatagtttcattatgtttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattatttt 196  Q
    ||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  24636987 actttaagaatagtttccttatgtttaacggggtctcacaattaagttatacttaatgttccattaaaaggactaactattctagggactttattatttt 24636888  T
Q  197 gaaacaaaacaaaatcaataaagaaatg 224  Q
    |||||||||||||||||| |||||||||    
T  24636887 gaaacaaaacaaaatcaagaaagaaatg 24636860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 26 - 218
Target Start/End: Original strand, 38232380 - 38232570
Alignment:
Q  26 atcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaat 125  Q
    ||||||||||| ||| |||||| | ||||||||||   |||| |||||  |||||||| ||||||||| ||||||| |||||| | |  ||| |||||||    
T  38232380 atcagtctacccacaaaatagtttttatgctttaagactatctcactttacaataaagtttgactacaaatactttaagaatactat-tttacgtttaat 38232478  T
Q  126 ggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaa 218  Q
    || || |||  |||||||||||| |||   |  ||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||    
T  38232479 ggagtgtcatgattaagttatacctaaaaatttattaaacagactaactattctagaga-tttattattttgaaataaaacaaaatcaataaa 38232570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 39 - 200
Target Start/End: Original strand, 32872857 - 32873019
Alignment:
Q  39 cataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaat 138  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||| ||| |||||| ||| ||| | | || | ||| | | || |||| | |||||||||    
T  32872857 cataatagtctctatgctttgatgttatcccacttcacaataaatcttaactacaaatattttaatagtattgtcactcttttcaatgagatctcacaat 32872956  T
Q  139 taagttatacttaatgttccat-taaacagactaactattctagggactttattattttgaaa 200  Q
    ||||| ||||||||||||| || ||||  ||  ||||||| || |||||||||||||||||||    
T  32872957 taagtcatacttaatgttctatataaatggatgaactattataaggactttattattttgaaa 32873019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 266 - 323
Target Start/End: Complemental strand, 22070164 - 22070107
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacat 323  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22070164 catgatacaaaaccaaacccaatcaatatagattggctattagggcttattccaacat 22070107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 21940629 - 21940573
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21940629 catgatacaaagccaaaaccaatcaatatagattggctattagggcttattccaaca 21940573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 24642605 - 24642556
Alignment:
Q  273 caaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24642605 caaagccaaacccaatcaatatagattggctattagggcttactccaaca 24642556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 6094087 - 6094031
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  6094087 catgatacaaagccaaactcaatcaatatagattggctattagggcttactccaaca 6094031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 22171452 - 22171396
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  22171452 catgatacaaaatcaaacccaatcaatatagattggctattagggcttattccaaca 22171396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 28554847 - 28554791
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||| | |||||||||||||||||||| |||||||    
T  28554847 catgatacaaagccaaacccaatcaacaaagattggctattagggcttactccaaca 28554791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 2375208 - 2375027
Alignment:
Q  26 atcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaat 125  Q
    |||| |||||| || |||||||   ||| |||||||| |||| |||| | ||||||| | |||||||| ||||||| | |||| | |   ||||||||||    
T  2375208 atcaatctacccacttaatagttcatatactttaatgttatctcact-cgcaataaatcgtgactacatatactttaaaaataatattcgtatgtttaat 2375110  T
Q  126 ggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaa 209  Q
    ||| | |||  ||||||| ||  | ||||||||||||||  |||||| |||| |||||| ||||||||||||||||||||||||    
T  2375109 gggtt-tcatgattaagtcatcataaatgttccattaaattgactaattattatagggagtttattattttgaaacaaaacaaa 2375027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 10920297 - 10920234
Alignment:
Q  129 gtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttatta 192  Q
    ||||||| ||||| | |||||||||||||||||||||||||||| ||||||||| | |||||||    
T  10920297 gtctcacgattaactcatacttaatgttccattaaacagactaattattctaggaattttatta 10920234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 108
Target Start/End: Original strand, 14983920 - 14984004
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaata 108  Q
    ||||| |||||||| ||||||||||| |||| ||| |||| ||||||||||| |||||||  |||| || ||||||||| ||||||    
T  14983920 atcattagtctacccacataatagtccctattctt-aatgttatcccacttcacaataaattttgattatagatactttaagaata 14984004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 285 - 322
Target Start/End: Complemental strand, 24636642 - 24636605
Alignment:
Q  285 caatcaatatagattggctattagggcttattccaaca 322  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  24636642 caatcaatatagattggctattatggcttactccaaca 24636605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 184; Significance: 2e-99; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 21330248 - 21330455
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  21330248 atcatcagtccacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacggatactttgagaatagtttccttatgttt 21330347  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330348 aatggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 21330447  T
Q  223 tgccttgt 230  Q
    || |||||    
T  21330448 tgtcttgt 21330455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 18796713 - 18796506
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| ||| |||||| | || |||||||     
T  18796713 atcatcagtctacccacataatagtctcaatgctttaatgatataccacttcacaataaagcttgactacagataatttaagaataatatccttatgtta 18796614  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| || ||| |||    
T  18796613 aaagaggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttgttattttgaaacaaaacaaaataaacaaataaa 18796514  T
Q  223 tgccttgt 230  Q
    | ||||||    
T  18796513 ttccttgt 18796506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 18620011 - 18619807
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||| | ||||| |||||||||||| |||||||||||  ||||||  ||| |||||||| ||||| ||||||||||| |||||| | || || |||||    
T  18620011 atcatcggcctacccacataatagtctatatgctttaatattatcccttttcacaataaagtttgaccacagatactttaagaataatatccttttgttt 18619912  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    |||||| ||||| |||||||| | |||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||    
T  18619911 aatggg-tctcataattaagtcacacttaatgctccattaaacagactaattattatagggactttattattttgaaacaaaacaaaatcaacaaagaaa 18619813  T
Q  223 tgcctt 228  Q
    | ||||    
T  18619812 ttcctt 18619807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 85 - 224
Target Start/End: Original strand, 19692598 - 19692737
Alignment:
Q  85 ttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctaggga 184  Q
    |||||||  |||||||| |||||| |||| ||  |||||||| | |||||  ||||||| |  ||||||||||||||||||||||||| |||||||||||    
T  19692598 ttgactaaggatactttaagaataatttcctttagtttaatgagatctcatgattaagtcaggcttaatgttccattaaacagactaattattctaggga 19692697  T
Q  185 ctttattattttgaaacaaaacaaaatcaataaagaaatg 224  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  19692698 cttcattattttgaaacaaaacaaaatcaataaagaaatg 19692737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 38 - 166
Target Start/End: Complemental strand, 20978084 - 20977956
Alignment:
Q  38 acataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaa 137  Q
    |||||||||||||||||||||| ||||||| |||||| || |||||||||||||| |||  ||| |||||| |||| |||| ||||||||| |||||  |    
T  20978084 acataatagtctctatgctttagtgatatctcacttcacattaaagcttgactacggatgttttaagaataatttccttatttttaatgggatctcatga 20977985  T
Q  138 ttaagttatacttaatgttccattaaaca 166  Q
    |||| |||| |||||||||||||||||||    
T  20977984 ttaaattattcttaatgttccattaaaca 20977956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 36270373 - 36270199
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| ||| |||||||| ||| |||||||| |||||| |||| || |||||||||| ||| |||  ||| |||||||| ||||| |||||    
T  36270373 atcatcagtctacccacacaatagtctttatactttaatgttatccctcttcacactaaagcttgattacggatgttttaagaatagtgtcattgtgttt 36270274  T
Q  123 aatggggtctcacaattaagttatacttaatgttcca-ttaaacagactaactattctagggactttattatttt 196  Q
    ||||  ||||||| ||||||| | ||||||  || || ||||  | |||||||||||||||||||||||||||||    
T  36270273 aatgatgtctcacgattaagtcacacttaacatttcatttaagtaaactaactattctagggactttattatttt 36270199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 266 - 323
Target Start/End: Original strand, 21330493 - 21330550
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaacat 323  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330493 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaacat 21330550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 18822290 - 18822115
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    ||||||||||||   |||||||| ||| | ||||||||||||||||||||||  | |||||||||| |||| ||  ||| |||||||| || || |||||    
T  18822290 atcatcagtctattgacataataatctatctgctttaatgatatcccacttcaaactaaagcttgattacatatgttttaagaatagtgtccttgtgttt 18822191  T
Q  123 aatggggtctcacaattaagttatacttaa-tgttcca-ttaaacagactaactattctagggactttattatttt 196  Q
    ||||| ||||||| ||||||  | |||||| | ||||| ||||||  |||||| ||||||  ||||||||||||||    
T  18822190 aatggtgtctcacgattaagccacacttaatttttccatttaaacgaactaacaattctatagactttattatttt 18822115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Original strand, 18852059 - 18852146
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagt 110  Q
    ||||| |||||||| |||||||||||| ||   ||||||| ||||| ||||| |||||||| | ||||||| ||||||| ||||||||    
T  18852059 atcattagtctaccgacataatagtctatacaatttaatgttatcctacttcacaataaagttggactacatatactttaagaatagt 18852146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 22183483 - 22183553
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactaca 93  Q
    ||||||| |||||| || ||||||||||||| |||||||| |||||   ||| || |||||||||||||||    
T  22183483 atcatcaatctacccacgtaatagtctctatactttaatgttatccattttcacactaaagcttgactaca 22183553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 12098618 - 12098654
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgcttta 59  Q
    ||||||||||||| |||||||||||||||||| ||||    
T  12098618 atcatcagtctacatacataatagtctctatgtttta 12098654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 19692773 - 19692829
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||| ||||||| ||| |||| ||||||||||||| |||||| |||||||    
T  19692773 catgatacaaaaccaaacctaataaatacagattggctattaaggcttactccaaca 19692829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 194
Target Start/End: Original strand, 36802664 - 36802820
Alignment:
Q  39 cataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaat 138  Q
    ||||||| ||| |||||||||||| ||||||||||  || | || ||||| ||| |||  ||| |||||| | ||||| |||||||||   |||  ||||    
T  36802664 cataataatctatatgctttaatgttatcccactttacactgaatcttgattacggatgttttaagaataatgtcattgtgtttaatgatatcttgcaat 36802763  T
Q  139 taagttatacttaatgttcca-ttaaacagactaactattctagggactttattatt 194  Q
    ||||| | | ||||| ||||| ||||||  | ||||||||| | |||||||||||||    
T  36802764 taagtaacatttaatattccatttaaacgaattaactattcaaaggactttattatt 36802820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 180; Significance: 4e-97; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 23 - 230
Target Start/End: Complemental strand, 18495 - 18288
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||    
T  18495 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaacaaagcttgactacggatactttgagaatagtttccttatgttt 18396  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18395 aatggggtctcacaattaagttatacttaatgttcaattaaatggactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 18296  T
Q  223 tgccttgt 230  Q
    ||||||||    
T  18295 tgccttgt 18288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 18252 - 18196
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 18196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 168; Significance: 5e-90; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 25990 - 26197
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  25990 atcatcagtctacctacataatagtcgctatgctttaatgatatcccacttttcaataaagcttgactacggatactttgagaatagtttccttatgttt 26089  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26090 aatggggtctcacaattaagttatatttaatgttccattaaatggactaactattctaaggactttattattttgaaacaaaacaaaatcaataaagaaa 26189  T
Q  223 tgccttgt 230  Q
    || |||||    
T  26190 tgtcttgt 26197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 26231 - 26286
Alignment:
Q  267 atgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26231 atgatacaaagccaaacccaatcaatatagattgactattagggcttattccaaca 26286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 166; Significance: 8e-89; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 23 - 228
Target Start/End: Complemental strand, 5736 - 5531
Alignment:
Q  23 atcatcagtctacctacataatagtctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgttt 122  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||||    
T  5736 atcatcagtctacccacataatagtctttatgctttaatgatatcccacttctcaataaagcttgactacatatactttaagaataatttccttatgttt 5637  T
Q  123 aatggggtctcacaattaagttatacttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaa 222  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  5636 aacggggtctcacaattaagttatacttaatgttccattaaacggactaactattctagggactttattattttgaaacaaaaataaatcaataaagaaa 5537  T
Q  223 tgcctt 228  Q
    ||||||    
T  5536 tgcctt 5531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 5492 - 5444
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggctta 314  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  5492 catgatacaaagccaaacccaaacaatatagattggctattagggctta 5444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 47 - 228
Target Start/End: Original strand, 230365 - 230545
Alignment:
Q  47 tctctatgctttaatgatatcccacttctcaataaagcttgactacagatacttttagaatagtttcattatgtttaatggggtctcacaattaagttat 146  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||| |||||||||| |||||||||||||||||||||    
T  230365 tctctatgctttaatgatatcccacttctcaataaatcttgactacaaatactttaagaatggtttccttatgtttaa-ggggtctcacaattaagttat 230463  T
Q  147 acttaatgttccattaaacagactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 228  Q
    ||||||||||||||||||| ||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||    
T  230464 acttaatgttccattaaacggactaactattataagaactttattattttgaaacaaaacaaaatcaataaagaaatgcctt 230545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 230584 - 230640
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  230584 catgatacaaagccaaacccaatcaatatagattggctattattgcttactccaaca 230640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 167 - 230
Target Start/End: Original strand, 8447 - 8510
Alignment:
Q  167 gactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgccttgt 230  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8447 gactaactattctagggactttattattttgaaacaaaacaaaatcaataaagaaatgtcttgt 8510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 8546 - 8602
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8546 catgatacaaagccgaacccaatcaatatagattggctattagggcttattccaaca 8602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 23769 - 23825
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23769 catgatacaaagccaaacccaatcaatatagattggctattagggcttattccaaca 23825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 274 - 322
Target Start/End: Complemental strand, 16571 - 16523
Alignment:
Q  274 aaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16571 aaagccaaacccaatcaatatagattggctattagggcttattccaaca 16523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 230
Target Start/End: Complemental strand, 16648 - 16615
Alignment:
Q  197 gaaacaaaacaaaatcaataaagaaatgccttgt 230  Q
    ||| ||||||||||||||||||||||||||||||    
T  16648 gaancaaaacaaaatcaataaagaaatgccttgt 16615  T

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Target: scaffold0705 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 322
Target Start/End: Original strand, 41 - 97
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| ||||||||||  |||||| |||||||||||||||||||||||||||||||    
T  41 catgatacaaagccaaaatcaatcattatagattggctattagggcttattccaaca 97  T

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Target: scaffold0637 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 9000 - 8944
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    |||||| |||||||||||||| |||| |||||||||||||| |||||||||||||||    
T  9000 catgatacaaagccaaacccattcaacatagattggctatttgggcttattccaaca 8944  T

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Target: scaffold0767 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 286 - 327
Target Start/End: Original strand, 1 - 42
Alignment:
Q  286 aatcaatatagattggctattagggcttattccaacattggt 327  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  1 aatcaatatagattggctattagggcttattccaacagtggt 42  T

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Target: scaffold0565 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 10202 - 10256
Alignment:
Q  266 catgatgcaaagccaaacccaatcaatatagattggctattagggcttattccaa 320  Q
    |||||| ||||| ||||| |||||||||||||||||||||||| ||||| |||||    
T  10202 catgatacaaagtcaaactcaatcaatatagattggctattagagcttactccaa 10256  T

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Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 211
Target Start/End: Original strand, 10127 - 10158
Alignment:
Q  180 agggactttattattttgaaacaaaacaaaat 211  Q
    ||||||||||||||||||||||||||||||||    
T  10127 agggactttattattttgaaacaaaacaaaat 10158  T

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Target: scaffold0170 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 5927 - 5878
Alignment:
Q  273 caaagccaaacccaatcaatatagattggctattagggcttattccaaca 322  Q
    ||||| ||||| ||||||||||||||||||||||| | |||| |||||||    
T  5927 caaagtcaaactcaatcaatatagattggctattatgacttactccaaca 5878  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 92267 - 92194
Alignment:
Q  129 gtctcacaattaagttatacttaatgttcca-ttaaacagactaactattctagggactttattattttgaaac 201  Q
    ||||||| ||||||||||||||||||||||| |||||   ||||  |||||||| |||||||||| ||| ||||    
T  92267 gtctcacgattaagttatacttaatgttccatttaaaataactagatattctagagactttattactttaaaac 92194  T

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