View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20551_high_16 (Length: 321)
Name: NF20551_high_16
Description: NF20551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20551_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 25 - 311
Target Start/End: Original strand, 6468229 - 6468515
Alignment:
| Q |
25 |
catcaatcctgtgatgtggaaagacaactggacagttgtaacagaagatggaagtctttcagctcagtttgaacacaccattttgataacgcctgatggg |
124 |
Q |
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| T |
6468229 |
catcaatcctgtgatgtggaaagacaactggacagttgtaacagaagatggaagtctttcagctcagtttgaacacaccattttgataacacctgatggg |
6468328 |
T |
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| Q |
125 |
gctgagattatgactcaatgctgacaaatgcatacattcaatatctttgcatagctcgcacgaagaaacttattattaagatgttattgatttaattact |
224 |
Q |
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| T |
6468329 |
gctgagattatgactcaatgctgacaaatgcatacattcaatatctttgcatagctcgcacgaagaaacttattattgagatgttattgatttaattact |
6468428 |
T |
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| Q |
225 |
tccagtttcagatcaaagttcttgctggaaattacccaagttatacgaagcatgtgccaaatgagtcagtgttgtattgtttctgtg |
311 |
Q |
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| T |
6468429 |
tccagtttcagatcaaagttcttgctggaaattacccaagttatacgaagcatgtgccaaatgagtcagtgttgtattctttctgtg |
6468515 |
T |
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