View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20551_high_4 (Length: 376)

Name: NF20551_high_4
Description: NF20551
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20551_high_4
NF20551_high_4
[»] chr7 (24 HSPs)
chr7 (68-355)||(18873133-18873420)
chr7 (73-355)||(15167948-15168230)
chr7 (77-355)||(10895795-10896073)
chr7 (69-355)||(14422758-14423043)
chr7 (62-346)||(12709833-12710117)
chr7 (62-346)||(13122904-13123188)
chr7 (73-355)||(16009351-16009631)
chr7 (62-346)||(13743492-13743774)
chr7 (62-281)||(12590633-12590850)
chr7 (62-355)||(13007207-13007497)
chr7 (75-269)||(16677152-16677348)
chr7 (75-269)||(17651388-17651584)
chr7 (62-128)||(21230949-21231015)
chr7 (73-128)||(11382871-11382926)
chr7 (73-128)||(11389348-11389403)
chr7 (62-128)||(20311039-20311107)
chr7 (73-192)||(13679428-13679548)
chr7 (72-127)||(2971254-2971309)
chr7 (72-127)||(20906461-20906516)
chr7 (73-127)||(11311059-11311113)
chr7 (67-108)||(831628-831669)
chr7 (67-108)||(1196808-1196849)
chr7 (67-108)||(34958578-34958619)
chr7 (73-129)||(46625961-46626017)
[»] chr5 (13 HSPs)
chr5 (68-355)||(22750914-22751201)
chr5 (61-348)||(38144525-38144810)
chr5 (73-355)||(28370055-28370335)
chr5 (73-355)||(19512160-19512441)
chr5 (68-281)||(23528479-23528690)
chr5 (73-137)||(18407944-18408008)
chr5 (62-128)||(22438736-22438803)
chr5 (73-137)||(23111200-23111264)
chr5 (72-127)||(19236900-19236955)
chr5 (61-187)||(34830024-34830150)
chr5 (61-128)||(42961566-42961633)
chr5 (72-125)||(22461158-22461211)
chr5 (72-125)||(22467782-22467835)
[»] chr3 (21 HSPs)
chr3 (73-355)||(14762758-14763040)
chr3 (75-355)||(38310802-38311082)
chr3 (75-355)||(20247791-20248063)
chr3 (75-355)||(24192728-24193009)
chr3 (73-355)||(9534102-9534382)
chr3 (72-355)||(23370505-23370787)
chr3 (75-357)||(55499104-55499385)
chr3 (72-355)||(24933828-24934109)
chr3 (62-281)||(41455087-41455304)
chr3 (62-241)||(16801457-16801635)
chr3 (73-134)||(18929239-18929300)
chr3 (73-137)||(17240513-17240577)
chr3 (72-332)||(10389443-10389702)
chr3 (72-127)||(13302240-13302295)
chr3 (72-127)||(13323787-13323842)
chr3 (72-186)||(10414532-10414646)
chr3 (72-186)||(10421202-10421316)
chr3 (72-127)||(12033444-12033499)
chr3 (72-127)||(13312896-13312951)
chr3 (72-127)||(17131732-17131787)
chr3 (72-127)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (62-355)||(11840-12133)
scaffold0026 (72-355)||(111460-111741)
[»] scaffold1773 (1 HSPs)
scaffold1773 (65-349)||(958-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (65-349)||(49959-50241)
[»] chr4 (12 HSPs)
chr4 (62-346)||(8045822-8046105)
chr4 (62-349)||(11847886-11848179)
chr4 (72-261)||(53483573-53483760)
chr4 (62-128)||(15408139-15408205)
chr4 (72-262)||(27906130-27906321)
chr4 (73-129)||(8834895-8834951)
chr4 (73-129)||(13888641-13888697)
chr4 (75-156)||(14486632-14486713)
chr4 (73-129)||(15245215-15245271)
chr4 (78-129)||(22724691-22724742)
chr4 (67-108)||(15747551-15747592)
chr4 (73-129)||(15308120-15308176)
[»] chr6 (23 HSPs)
chr6 (73-306)||(23057760-23057993)
chr6 (62-355)||(29614136-29614429)
chr6 (73-347)||(23838980-23839253)
chr6 (62-348)||(10986170-10986455)
chr6 (73-355)||(4477631-4477912)
chr6 (62-333)||(18800233-18800503)
chr6 (75-357)||(21565214-21565494)
chr6 (62-207)||(930085-930229)
chr6 (62-355)||(12168138-12168428)
chr6 (62-355)||(19287047-19287337)
chr6 (62-355)||(19785859-19786149)
chr6 (62-355)||(19878231-19878521)
chr6 (62-355)||(19884007-19884297)
chr6 (72-261)||(34639986-34640173)
chr6 (72-261)||(34646660-34646847)
chr6 (72-186)||(25469704-25469816)
chr6 (62-128)||(24512833-24512899)
chr6 (73-269)||(9187352-9187550)
chr6 (73-129)||(25397172-25397228)
chr6 (73-129)||(19471335-19471391)
chr6 (73-129)||(25348486-25348542)
chr6 (72-156)||(31252394-31252478)
chr6 (75-129)||(25598643-25598697)
[»] chr8 (15 HSPs)
chr8 (75-355)||(8727735-8728015)
chr8 (72-355)||(44477397-44477678)
chr8 (72-355)||(44492555-44492836)
chr8 (62-346)||(23866396-23866680)
chr8 (164-347)||(27940946-27941127)
chr8 (62-281)||(17054440-17054656)
chr8 (73-182)||(18614217-18614327)
chr8 (73-137)||(23482053-23482117)
chr8 (62-128)||(14056553-14056619)
chr8 (73-129)||(39364919-39364975)
chr8 (62-128)||(25111976-25112042)
chr8 (73-127)||(29643386-29643440)
chr8 (72-127)||(24320670-24320725)
chr8 (61-128)||(27940840-27940907)
chr8 (73-129)||(21931696-21931752)
[»] chr2 (17 HSPs)
chr2 (73-355)||(19661454-19661734)
chr2 (73-355)||(6483492-6483772)
chr2 (73-355)||(6486959-6487239)
chr2 (62-357)||(26583600-26583892)
chr2 (75-357)||(23089057-23089337)
chr2 (75-357)||(23878781-23879060)
chr2 (73-357)||(23101463-23101745)
chr2 (72-186)||(5706023-5706137)
chr2 (73-137)||(23265133-23265197)
chr2 (73-137)||(23280201-23280265)
chr2 (73-134)||(21908353-21908414)
chr2 (73-129)||(24661576-24661632)
chr2 (72-127)||(10577-10632)
chr2 (62-253)||(23168288-23168483)
chr2 (62-253)||(23579545-23579740)
chr2 (72-127)||(25180929-25180984)
chr2 (63-144)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (75-355)||(14398-14678)
[»] scaffold0924 (1 HSPs)
scaffold0924 (62-349)||(740-1027)
[»] scaffold0029 (1 HSPs)
scaffold0029 (62-355)||(111674-111948)
[»] chr1 (12 HSPs)
chr1 (73-355)||(20437024-20437305)
chr1 (62-281)||(41111884-41112100)
chr1 (73-137)||(32651563-32651627)
chr1 (73-128)||(19663517-19663572)
chr1 (73-137)||(18712790-18712854)
chr1 (73-129)||(20805320-20805376)
chr1 (73-128)||(11158093-11158148)
chr1 (75-129)||(10811785-10811839)
chr1 (72-127)||(20851132-20851187)
chr1 (72-127)||(20857759-20857814)
chr1 (72-127)||(21706276-21706331)
chr1 (72-127)||(21710818-21710873)
[»] scaffold0553 (1 HSPs)
scaffold0553 (72-355)||(10195-10477)
[»] scaffold0544 (1 HSPs)
scaffold0544 (72-355)||(1525-1807)
[»] scaffold0117 (2 HSPs)
scaffold0117 (62-355)||(1887-2179)
scaffold0117 (62-355)||(8564-8856)
[»] scaffold0247 (1 HSPs)
scaffold0247 (62-355)||(11116-11407)
[»] scaffold0058 (1 HSPs)
scaffold0058 (62-346)||(75-356)
[»] scaffold0090 (1 HSPs)
scaffold0090 (61-349)||(17948-18236)
[»] scaffold0476 (1 HSPs)
scaffold0476 (75-357)||(3295-3576)
[»] scaffold0154 (1 HSPs)
scaffold0154 (62-269)||(30715-30923)
[»] scaffold0077 (1 HSPs)
scaffold0077 (75-357)||(3624-3904)
[»] scaffold0634 (1 HSPs)
scaffold0634 (232-355)||(3435-3558)
[»] scaffold0796 (2 HSPs)
scaffold0796 (67-355)||(1727-2013)
scaffold0796 (67-263)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (68-155)||(904-991)
scaffold0456 (68-155)||(8049-8136)
scaffold0456 (216-312)||(806-901)
scaffold0456 (216-312)||(7951-8046)
[»] scaffold0129 (1 HSPs)
scaffold0129 (66-184)||(45268-45386)
[»] scaffold0107 (1 HSPs)
scaffold0107 (62-128)||(40521-40587)
[»] scaffold0222 (1 HSPs)
scaffold0222 (73-137)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (73-137)||(116887-116951)
[»] scaffold0310 (1 HSPs)
scaffold0310 (62-128)||(17643-17710)
[»] scaffold0124 (1 HSPs)
scaffold0124 (73-128)||(34276-34331)
[»] scaffold0019 (1 HSPs)
scaffold0019 (62-128)||(135473-135539)
[»] scaffold0461 (1 HSPs)
scaffold0461 (73-137)||(8-72)
[»] scaffold0235 (1 HSPs)
scaffold0235 (62-126)||(22582-22646)
[»] scaffold0146 (1 HSPs)
scaffold0146 (73-137)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (73-137)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (62-124)||(1453-1515)
[»] scaffold0261 (1 HSPs)
scaffold0261 (62-262)||(23559-23760)
[»] scaffold2054 (1 HSPs)
scaffold2054 (62-161)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (72-156)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (73-192)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (73-129)||(12296-12352)
[»] scaffold0790 (1 HSPs)
scaffold0790 (59-94)||(5487-5522)
[»] scaffold0139 (1 HSPs)
scaffold0139 (73-128)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (63-144)||(493019-493099)
[»] scaffold0096 (1 HSPs)
scaffold0096 (69-129)||(39503-39563)
[»] scaffold0034 (1 HSPs)
scaffold0034 (75-262)||(73149-73337)
[»] scaffold0348 (1 HSPs)
scaffold0348 (72-127)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (72-127)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (72-127)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (73-127)||(1913-1967)
[»] scaffold0453 (1 HSPs)
scaffold0453 (72-156)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (73-129)||(2628-2684)
[»] scaffold0003 (2 HSPs)
scaffold0003 (59-87)||(80293-80321)
scaffold0003 (59-87)||(100015-100043)


Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 68 - 355
Target Start/End: Complemental strand, 18873420 - 18873133
Alignment:
Q  68 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 167  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 18873321  T
Q  168 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 267  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  18873320 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 18873221  T
Q  268 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  18873220 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 18873133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 73 - 355
Target Start/End: Complemental strand, 15168230 - 15167948
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  15168130 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 15168031  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  15168030 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 15167948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 77 - 355
Target Start/End: Original strand, 10895795 - 10896073
Alignment:
Q  77 gtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttgat 175  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  176 gatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaatt 275  Q
    ||||||||||| ||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10895895 gatgattctgaggggaa-tgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 10895993  T
Q  276 gattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  10895994 gattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 10896073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 69 - 355
Target Start/End: Complemental strand, 14423043 - 14422758
Alignment:
Q  69 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttag 167  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  168 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 267  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  14422943 ggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  268 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| ||||||||| |||||    
T  14422844 cataaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgttgttgatg 14422758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 62 - 346
Target Start/End: Original strand, 12709833 - 12710117
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  12709833 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 12709931  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  12709932 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 12710030  T
Q  261 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 346  Q
    |||||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  12710031 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtgattgttg 12710117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 62 - 346
Target Start/End: Original strand, 13122904 - 13123188
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13122904 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13123002  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  13123003 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 13123101  T
Q  261 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 346  Q
    |||||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  13123102 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtgattgttg 13123188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 73 - 355
Target Start/End: Complemental strand, 16009631 - 16009351
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  16009531 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 16009433  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    | ||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||| |||||    
T  16009432 actgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 16009351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 62 - 346
Target Start/End: Complemental strand, 13743774 - 13743492
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13743774 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13743676  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| ||||    
T  13743675 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgc 13743576  T
Q  262 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 346  Q
    ||||||||||||||| |||| |||||||   | |||||| |||||||||||   ||||| |||||||| |||  ||| |||||||    
T  13743575 tgtgatcataaattggttga-aattatgcttggttggataaattgatgaataattgtataatggtggagtgatatgtgattgttg 13743492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 62 - 281
Target Start/End: Original strand, 12590633 - 12590850
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12590633 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaa 12590731  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| ||||||||| ||||||| ||||||||||    
T  12590732 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgc 12590829  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  12590830 tgtaatccattaattgattga 12590850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 62 - 355
Target Start/End: Complemental strand, 13007497 - 13007207
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  13007497 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 13007399  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  13007398 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 13007302  T
Q  262 tgtgat-cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgatgatg 355  Q
    ||| || ||| |||||||||| | ||  ||   |||| ||||||||||||| |  ||| ||||||||||||||  || |||||||||||| |||||    
T  13007301 tgtaatccatgaattgattga-attttggatgaattgtatgaattgatgaaatattgtgtgatggtggaatgattctataattgttgttgttgatg 13007207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 75 - 269
Target Start/End: Complemental strand, 16677348 - 16677152
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 172  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 269  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 16677152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 75 - 269
Target Start/End: Complemental strand, 17651584 - 17651388
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 172  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 269  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 17651388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 21230949 - 21231015
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  21230949 ttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 20311039 - 20311107
Alignment:
Q  62 ttctgcaaaa--ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  20311039 ttctgcaaaaatctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 13679548 - 13679428
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 171  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 13679449  T
Q  172 tgatgatgattctgaagggaa 192  Q
    ||||| ||||| |||| ||||    
T  13679448 tgatgctgattttgaaaggaa 13679428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 2971309 - 2971254
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  2971309 ctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 20906461 - 20906516
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20906461 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  67 caaaactaaggtaagggtgagactatctctcgataatcataa 108  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  67 caaaactaaggtaagggtgagactatctctcgataatcataa 108  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  67 caaaactaaggtaagggtgagactatctctcgataatcataa 108  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    |||| |||||||||||||| ||||| || || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 68 - 355
Target Start/End: Complemental strand, 22751201 - 22750914
Alignment:
Q  68 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 167  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 22751102  T
Q  168 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 267  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  22751101 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 22751002  T
Q  268 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  22751001 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 22750914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 61 - 348
Target Start/End: Original strand, 38144525 - 38144810
Alignment:
Q  61 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattga 160  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  38144525 attctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattga 38144624  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||||||||||| |||| |||||||| | |||||||||||||| ||||||| ||||||| ||||||||||||||||||||  |||||    
T  38144625 gggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttg 38144723  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 348  Q
     |||||||||||||||||||| ||||| ||  |||||||||||||||||||  | |||||||||||||| ||| ||||| ||||||||    
T  38144724 ttgtgatcataaattgattga-aattacgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgtt 38144810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 73 - 355
Target Start/End: Original strand, 28370055 - 28370335
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  28370155 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 28370253  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||||||||||| ||||| ||||||||| |||||    
T  28370254 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 28370335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 73 - 355
Target Start/End: Complemental strand, 19512441 - 19512160
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    ||||||||||| || |||| |||||||| | |||||||||||||| ||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  19512341 tgatgatgattttg-aggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 19512243  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||| |||||    
T  19512242 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 19512160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 68 - 281
Target Start/End: Complemental strand, 23528690 - 23528479
Alignment:
Q  68 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 167  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||  |||||    
T  23528690 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 23528592  T
Q  168 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 267  Q
    ||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||||| ||    
T  23528591 ggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaat 23528494  T
Q  268 -cataaattgattga 281  Q
     ||| ||||||||||    
T  23528493 ccatgaattgattga 23528479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 22438736 - 22438803
Alignment:
Q  62 ttctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22438736 ttctgcaaaatctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 23111200 - 23111264
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 19236955 - 19236900
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  19236955 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 34830150 - 34830024
Alignment:
Q  61 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattg 159  Q
    |||||||||  |||||||||||||| || ||||| || |||||  |||| ||||||||||||||||  | ||||| | |||||| | |||||| ||||||    
T  34830150 attctgcaattctaaggtaagggtgggattatctttcaataatt-taatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaattg 34830052  T
Q  160 agggttagggtttgatgatgattctgaa 187  Q
    ||  ||||||| ||||| ||||| ||||    
T  34830051 agaattagggtatgatgctgattttgaa 34830024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 42961633 - 42961566
Alignment:
Q  61 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  42961633 attctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 22461211 - 22461158
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 125  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22461211 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 22467835 - 22467782
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 125  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22467835 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 73 - 355
Target Start/End: Original strand, 14762758 - 14763040
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14762858 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 14762957  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||    
T  14762958 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggagtgatctgtaattgttgttgttgatg 14763040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 75 - 355
Target Start/End: Original strand, 38310802 - 38311082
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  175 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 274  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 38311001  T
Q  275 tgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||| ||||||||| |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  38311002 tgattgaaaattatgagtgattggatgaatggatgaatttgtgtatgaaggtggaatgatctgtaattgttgttgttgatg 38311082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 75 - 355
Target Start/End: Original strand, 20247791 - 20248063
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 174  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  175 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 274  Q
    ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 20247990  T
Q  275 tgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||| ||||||||| |||||        |||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  20247991 tgattgaaaattatgagtgattg--------gatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 20248063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 75 - 355
Target Start/End: Complemental strand, 24193009 - 24192728
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 173  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  174 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtg-atcataa 272  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaatcataa 24192810  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    | ||||||| || |||||  |||||||| ||||||||||| |  ||||||||||||||||| ||||| || |||||| |||||    
T  24192809 actgattga-aaatatgattgattggataaattgatgaatattggtatgatggtggaatgatctgtatttcttgttgttgatg 24192728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 73 - 355
Target Start/End: Complemental strand, 9534382 - 9534102
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    ||||||||||||| || | |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  |||||  ||||||||||    
T  9534282 gatgatgattctg-agtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtgatcataa 9534184  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||| |||||    
T  9534183 attgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 9534102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 72 - 355
Target Start/End: Original strand, 23370505 - 23370787
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 170  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 23370604  T
Q  171 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 270  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  23370605 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 23370703  T
Q  271 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| ||||||||| |||||    
T  23370704 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgttgttgatg 23370787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 75 - 357
Target Start/End: Original strand, 55499104 - 55499385
Alignment:
Q  75 aggtaagggtgagactatctctcgataatc-ataatctataatttctg-aaaattgacctaattgcatagttttggaagataaa-ttgagggttagggtt 171  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| | ||||||||||||| ||| ||   ||| | |||||| |||||||||||||||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttg-aggataaaattgagggttagggtt 55499202  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    ||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||   |||||||||||||||    
T  55499203 tgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatacagttgctgtgatcata 55499301  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatgtc 357  Q
    |||||||||| || ||| |  |||||||||||||||| || || |||||||||||||||||| |||| |||||||||| |||||||    
T  55499302 aattgattga-aaatataattgattggatgaattgatcaagttttgtatgatggtggaatgatctgt-attgttgttgttgatgtc 55499385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 72 - 355
Target Start/End: Original strand, 24933828 - 24934109
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||   ||||||||    
T  24933828 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 24933926  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat-cat 270  Q
    ||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||||||||||||  || |||    
T  24933927 tgatgatgattctgatgg--aatgagtaaagatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgttgttgctgcaatccat 24934024  T
Q  271 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgatgatg 355  Q
     |||||||||| | || |||   |||| |||||||||||||| | ||||||||||| ||||||  |||||||||||| || |||||    
T  24934025 taattgattga-atttttgatgtattgtatgaattgatgaatatttgtatgatggtagaatgattctgtaattgttgctgttgatg 24934109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 62 - 281
Target Start/End: Original strand, 41455087 - 41455304
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||   |||     
T  41455087 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataggatgaa 41455185  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
      |||||| |||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||  ||||||||| ||||||| || | |||||    
T  41455186 aattagggattgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttgaaatttaatgtcaagaatgaaatcttaatccatatggttgc 41455283  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  41455284 tgtaatccatgaattgattga 41455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 62 - 241
Target Start/End: Original strand, 16801457 - 16801635
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattga 160  Q
    |||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| ||||| ||| ||| |||||| |||||||    
T  16801457 ttctgcaaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattga 16801555  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaa 241  Q
     |||||||| |||||||||||| ||| | |||  | ||||| |||||||||| | || |||||| | ||||| ||||||||    
T  16801556 aggttaggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaa 16801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 134  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 332
Target Start/End: Original strand, 10389443 - 10389702
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10389443 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10389542  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgtta-attctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat-ca 269  Q
    ||||||||||||||| ||  |||||||||  || ||||||  || | | | ||| ||| ||| ||||||||| ||||| | ||||||||||||  || ||    
T  10389543 tgatgatgattctgatgg--aatgggtaaagatgatgttagtttttctcggaatttaacgttaagaatgaaagcttaacccatgttgttgctgcaatcca 10389640  T
Q  270 taaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatg 332  Q
    | |||||||||| | || |||   |||| |||||||||||||| | |||||| |||| |||||    
T  10389641 ttaattgattga-atttttgatgaattgtatgaattgatgaatatttgtatgttggtagaatg 10389702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 13302240 - 13302295
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13302240 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 13323787 - 13323842
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13323787 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 10414532 - 10414646
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10414532 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10414631  T
Q  172 tgatgatgattctga 186  Q
    |||||||||||||||    
T  10414632 tgatgatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 10421202 - 10421316
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10421202 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10421301  T
Q  172 tgatgatgattctga 186  Q
    |||||||||||||||    
T  10421302 tgatgatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 12033444 - 12033499
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  12033444 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 13312896 - 13312951
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||| ||||||||    
T  13312896 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 17131787 - 17131732
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  17131787 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 51301644 - 51301589
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  51301644 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 242; Significance: 1e-134; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 62 - 355
Target Start/End: Original strand, 11840 - 12133
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11840 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgag 11939  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||    
T  11940 agttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgc 12039  T
Q  262 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  12040 tgtgatcataagttgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 12133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 72 - 355
Target Start/End: Complemental strand, 111741 - 111460
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 111642  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    |||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  111641 tgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 111543  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||| |||||    
T  111542 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 111460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 65 - 349
Target Start/End: Complemental strand, 1240 - 958
Alignment:
Q  65 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 164  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  1240 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 1142  T
Q  165 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 264  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  1141 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 1043  T
Q  265 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttg 349  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1042 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttg 958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 65 - 349
Target Start/End: Complemental strand, 50241 - 49959
Alignment:
Q  65 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 164  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  50241 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 50143  T
Q  165 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 264  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  50142 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 50044  T
Q  265 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttg 349  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  50043 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttg 49959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 62 - 346
Target Start/End: Original strand, 8045822 - 8046105
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  8045822 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 8045920  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
    ||||||||||||| ||  |||||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  8045921 ggttagggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgc 8046020  T
Q  262 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 346  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8046021 tgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttg 8046105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 62 - 349
Target Start/End: Complemental strand, 11848179 - 11847886
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa----- 156  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || || ||         
T  11848179 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatca 11848080  T
Q  157 -ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgt 255  Q
     ||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||| || || ||||||||||||||||||||||||||||||| |||    
T  11848079 attgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgt 11847980  T
Q  256 tgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttg 349  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  11847979 tgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatgatggaatgatctgtaattgttgttg 11847886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 72 - 261
Target Start/End: Complemental strand, 53483760 - 53483573
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 170  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 53483662  T
Q  171 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
    |||||||||||||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  53483661 ttgatgatgattctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 53483573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 15408205 - 15408139
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||| | |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15408205 ttctgcagatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 262
Target Start/End: Complemental strand, 27906321 - 27906130
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggt 170  Q
    ||||| |||||||| || ||||| || || |||||||| ||||||||||||||||| |  |||| | |||||| | |||||| ||||||||  |||||||    
T  27906321 ctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaattgagaattagggt 27906222  T
Q  171 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 262  Q
     ||||| ||||| |||| | ||| | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  27906221 gtgatgttgattttgaaagaaaaggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 27906130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 14486713 - 14486632
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 156  Q
    |||||||||||||||||||  || || |||||||| ||||||||||||||||| | | ||||| || ||| | |||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaa 14486632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  78 taagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    |||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  67 caaaactaaggtaagggtgagactatctctcgataatcataa 108  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    |||| |||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 73 - 306
Target Start/End: Complemental strand, 23057993 - 23057760
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  23057893 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 23057794  T
Q  273 attgattgagaattatgagcgattggatgaattg 306  Q
    ||||||||| ||||||||| ||||||||||||||    
T  23057793 attgattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 62 - 355
Target Start/End: Original strand, 29614136 - 29614429
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaaga-taaattga 160  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||    
T  29614136 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattga 29614235  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||| |  |||||| |||||||||||||||||| ||||||||    
T  29614236 gggttagggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgtattg-aatgtttagaatgaaaacttaatctttgttgttg 29614334  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||||||| |||||||| | ||||||  ||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| |||||    
T  29614335 ctgtgatcataacttgattgaaatttatgaatgattggatgaattgatgaatttgtgtatgatggtggaataatctgtaagtgttgttgttgatg 29614429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 73 - 347
Target Start/End: Complemental strand, 23839253 - 23838980
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagt-tttggaagataaattgagggttagggtt 171  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    ||||||||||||| ||||| |||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  23839153 tgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 23839055  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 347  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| |||||||    
T  23839054 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgt 23838980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 62 - 348
Target Start/End: Original strand, 10986170 - 10986455
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattga 160  Q
    ||||||||  ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  10986170 ttctgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattga 10986269  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    |||||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||    
T  10986270 gggttagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttg 10986368  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgtt 348  Q
     |||||||||||||||||||| ||||| ||  |||||||||||||||||||  | |||||||||||||| ||| ||||| ||||||||    
T  10986369 ttgtgatcataaattgattga-aattacgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgtt 10986455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 73 - 355
Target Start/End: Complemental strand, 4477912 - 4477631
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    |||||||||||||| |||| |||||||| | |||||| ||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||    
T  4477812 tgatgatgattctg-aggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||||| ||||||||  |||||||||| ||||| ||  | |||||||||||||| ||| ||||| ||||||||| |||||    
T  4477713 aattgattga-aattatgattgattggatgatttgataaagatttgtatgatggtggagtgatctgtatttgttgttgttgatg 4477631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 62 - 333
Target Start/End: Complemental strand, 18800503 - 18800233
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagata-aattga 160  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  18800503 ttctgcaaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattga 18800404  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | ||||||| ||||||| |||||||||| ||||||    
T  18800403 gggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttg 18800305  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga 333  Q
     |||||||| ||||||||||| || ||| |  ||||||||||||||||||| ||  |||||||||||||||||    
T  18800304 ttgtgatcacaaattgattga-aaatataattgattggatgaattgatgaagtttggtatgatggtggaatga 18800233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 75 - 357
Target Start/End: Original strand, 21565214 - 21565494
Alignment:
Q  75 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 172  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 21565312  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  21565313 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 21565411  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatgtc 357  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||||||||||| |||| |||||||||| |||||||    
T  21565412 attgattga-aaatataattgattggatgaattgatgaagttctgtatgatggtggaatgatctgt-attgttgttgttgatgtc 21565494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 62 - 207
Target Start/End: Original strand, 930085 - 930229
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||    
T  930085 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgag 930184  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcat 207  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||    
T  930185 ggttagggtttgatgatgtttctgaaggg-aatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 62 - 355
Target Start/End: Complemental strand, 12168428 - 12168138
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12168428 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 12168330  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  12168329 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 12168233  T
Q  262 tgtgat-cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgatgatg 355  Q
    ||| || ||| |||||||||| | ||  ||   |||| ||||||||||||| |  ||| ||||||||||||||  || |||||||||||| |||||    
T  12168232 tgtaatccatgaattgattga-attttggatgaattgtatgaattgatgaaatattgtgtgatggtggaatgattctataattgttgttgttgatg 12168138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 62 - 355
Target Start/End: Complemental strand, 19287337 - 19287047
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19287337 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19287239  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19287238 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19287142  T
Q  262 tgtgat-cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgatgatg 355  Q
    ||| || ||| |||||||||| | ||  ||   |||| ||||||||||||| |  ||| ||||||||||||||  || |||||||||||| |||||    
T  19287141 tgtaatccatgaattgattga-attttggatgaattgtatgaattgatgaaatattgtgtgatggtggaatgattctataattgttgttgttgatg 19287047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 62 - 355
Target Start/End: Original strand, 19785859 - 19786149
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| |||     
T  19785859 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaa 19785957  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19785958 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19786054  T
Q  262 tgtgat-cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgatgatg 355  Q
    ||| || ||| |||||||||| | ||  ||   |||| ||||||||||||| |  ||| ||||||||||||||  || |||||||||||| |||||    
T  19786055 tgtaatccatgaattgattga-attttggatgaattgtatgaattgatgaaatattgtgtgatggtggaatgattctataattgttgttgttgatg 19786149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 62 - 355
Target Start/End: Complemental strand, 19878521 - 19878231
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19878521 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19878423  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19878422 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19878326  T
Q  262 tgtgat-cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgatgatg 355  Q
    ||| || ||| |||||||||| | ||  ||   |||| ||||||||||||| |  ||| ||||||||||||||  || |||||||||||| |||||    
T  19878325 tgtaatccatgaattgattga-attttggatgaattgtatgaattgatgaaatattgtgtgatggtggaatgattctataattgttgttgttgatg 19878231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 62 - 355
Target Start/End: Complemental strand, 19884297 - 19884007
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19884297 ttctgcaaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19884199  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19884198 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19884102  T
Q  262 tgtgat-cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgatgatg 355  Q
    ||| || ||| |||||||||| | ||  ||   |||| ||||||||||||| |  ||| ||||||||||||||  || |||||||||||| |||||    
T  19884101 tgtaatccatgaattgattga-attttggatgaattgtatgaattgatgaaatattgtgtgatggtggaatgattctataattgttgttgttgatg 19884007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 72 - 261
Target Start/End: Original strand, 34639986 - 34640173
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||   ||   ||||||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataataagaaaattagggtt 34640085  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34640086 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34640173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 72 - 261
Target Start/End: Original strand, 34646660 - 34646847
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||   ||   ||||||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataataagaaaattagggtt 34646759  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
    |||||||| |||||| ||  |||| ||||  || |||||| || | |   ||| ||| ||| ||||||||||||||||| ||||||||||    
T  34646760 tgatgatggttctgatgg--aatgagtaaagatgatgttagttttctctgaatttaacgttaagaatgaaaacttaatccatgttgttgc 34646847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 25469704 - 25469816
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  25469704 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtt 25469801  T
Q  172 tgatgatgattctga 186  Q
    ||||||| |||||||    
T  25469802 tgatgataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 24512833 - 24512899
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||| ||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  24512833 ttctgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 269
Target Start/End: Complemental strand, 9187550 - 9187352
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat--aaattgagggttaggg 169  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||| ||||| || ||||||| || ||| | ||| ||  |||||| |  ||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaaatagatctaattgaattgttcttgaatataaaaattgggaattaggg 9187451  T
Q  170 tttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 269  Q
     |||||| ||||| |||| ||||    |||| ||||||||| | | ||||||||| || ||||||||||||   ||||||||||  ||||| ||||||||    
T  9187450 -ttgatgctgattttgaaaggaatgatgtaagaatcatgtttaatgtgttgtaatttagtgttcagaatgatttcttaatctataatgttgttgtgatca 9187352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 31252478 - 31252394
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 156  Q
    ||||||||||||||||| ||||| |  || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  31252478 ctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 31252394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||||| ||||| || |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 75 - 355
Target Start/End: Original strand, 8727735 - 8728015
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 173  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  174 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 273  Q
    | ||||||||||| ||| | |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  8727835 acgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaa 8727933  T
Q  274 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  8727934 ttgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 8728015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 72 - 355
Target Start/End: Complemental strand, 44477678 - 44477397
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44477579  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44477578 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44477480  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||| |||||    
T  44477479 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 44477397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 72 - 355
Target Start/End: Complemental strand, 44492836 - 44492555
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44492737  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44492736 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44492638  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||| |||||    
T  44492637 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 44492555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 62 - 346
Target Start/End: Complemental strand, 23866680 - 23866396
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  23866680 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 23866582  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  ||||||||||| ||||||||    
T  23866581 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 23866483  T
Q  261 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 346  Q
    || ||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||||||||| | |||| |||||||    
T  23866482 ctctgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaataatctgtgattgttg 23866396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 164 - 347
Target Start/End: Original strand, 27940946 - 27941127
Alignment:
Q  164 ttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 263  Q
    ||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| |||||||||||||||||| |||||||||  ||||| |     
T  27940946 ttagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatctatactgttgtta 27941044  T
Q  264 tgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 347  Q
    |||||||||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| || || |||||||    
T  27941045 tgatcataaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctatatttgttgt 27941127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 17054656 - 17054440
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||     
T  17054656 ttctgcaaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaa 17054558  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  17054557 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 17054461  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  17054460 tgtaatccatgaattgattga 17054440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 18614327 - 18614217
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 171  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| | ||||| || ||| | |||||| ||||||||  ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattgagaattagggtt 18614228  T
Q  172 tgatgatgatt 182  Q
    | ||| |||||    
T  18614227 ttatgctgatt 18614217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 23482053 - 23482117
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 14056553 - 14056619
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  14056553 ttctgcaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 25112042 - 25111976
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    |||| |||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  25112042 ttctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 24320670 - 24320725
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  24320670 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 27940840 - 27940907
Alignment:
Q  61 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  27940840 attctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 27940907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 73 - 355
Target Start/End: Original strand, 19661454 - 19661734
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| |||||||||||    
T  19661554 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataa 19661652  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| ||||||||| |||||    
T  19661653 attgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgttgttgatg 19661734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 73 - 355
Target Start/End: Complemental strand, 6483772 - 6483492
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6483672 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6483574  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||||||||||| ||||| ||||||||| |||||    
T  6483573 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 6483492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 73 - 355
Target Start/End: Complemental strand, 6487239 - 6486959
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6487139 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6487041  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||||||||||| ||||| ||||||||| |||||    
T  6487040 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 6486959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 62 - 357
Target Start/End: Complemental strand, 26583892 - 26583600
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  26583892 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 26583794  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
    |||||||| |||||||||||||||| |||||| ||||||| |||||||||| | ||||||||  | ||||||||||||||  | ||||||||  ||||||    
T  26583793 ggttagggcttgatgatgattctgaggggaaa-gggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgc 26583695  T
Q  262 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatgtc 357  Q
    |||||||| || |||| |   |||||  |  | |||||||||||| |||| || |||||||||||||||||| |||| |||||||||| |||||||    
T  26583694 tgtgatcacaatttgaattgtaattagaattggttggatgaattggtgaaattttgtatgatggtggaatgatctgt-attgttgttgttgatgtc 26583600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 75 - 357
Target Start/End: Original strand, 23089057 - 23089337
Alignment:
Q  75 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 172  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 23089155  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  23089156 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 23089254  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatgtc 357  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||||||||||| |||| |||||||||| |||||||    
T  23089255 attgattga-aaatataattgattggatgaattgatgaagttctgtatgatggtggaatgatctgt-attgttgttgttgatgtc 23089337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 75 - 357
Target Start/End: Complemental strand, 23879060 - 23878781
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 173  Q
    |||||||||||||||||||||||  |||| || || |||||||||  ||||||||||||||||| ||   ||| | ||| |||||||||||||||||| |    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttg-aggattaaattgagggttagggtt-g 23878963  T
Q  174 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 273  Q
     |||||||||||| |||||  ||||||| |||||||||||| ||||||||| | ||||||||||||||| ||||||||||  ||||| ||||||||||||    
T  23878962 ttgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgttgtgatcataaa 23878863  T
Q  274 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatgtc 357  Q
    |||||||| || ||  |  ||||||||||||||||||| || |||||||||||||||||| |||| |||||||||| |||||||    
T  23878862 ttgattga-aaatagaattgattggatgaattgatgaagttttgtatgatggtggaatgatctgt-attgttgttgttgatgtc 23878781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 73 - 357
Target Start/End: Original strand, 23101463 - 23101745
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggt 170  Q
    |||||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||  ||   ||| | |||||| ||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttg-aggataaaattgagggttagggt 23101561  T
Q  171 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 270  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | | |||| |||||||| ||||||||||  ||||| |||||||||    
T  23101562 ttgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgttgtgatcat 23101660  T
Q  271 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatgtc 357  Q
    ||||||||||| || ||| |  ||||||||||||| ||||| || |||||||||||||||||| | || |||||||||| |||||||    
T  23101661 aaattgattga-aaatataattgattggatgaattcatgaagttctgtatgatggtggaatgatcagt-attgttgttgttgatgtc 23101745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 5706023 - 5706137
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 170  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 5706121  T
Q  171 ttgatgatgattctga 186  Q
    ||||||||||||||||    
T  5706122 ttgatgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 134  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 10632 - 10577
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  10632 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 253
Target Start/End: Original strand, 23168288 - 23168483
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 156  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23168288 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23168386  T
Q  157 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 253  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23168387 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23168483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 62 - 253
Target Start/End: Original strand, 23579545 - 23579740
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 156  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23579545 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23579643  T
Q  157 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctat 253  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||   ||||||||||    
T  23579644 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctat 23579740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 25180929 - 25180984
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  25180929 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 26885246 - 26885166
Alignment:
Q  63 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 144  Q
    |||||||  |||||||||||||| || ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  26885246 tctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 26885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 75 - 355
Target Start/End: Original strand, 14398 - 14678
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 173  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  174 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 273  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| |||||||||||||||||||| ||||||||||||||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcataaa 14597  T
Q  274 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
     ||||||| || |||||  |||||||| ||||||||||| |  ||||||||||||||||| ||||| ||||||||| |||||    
T  14598 ctgattga-aaatatgattgattggataaattgatgaatattggtatgatggtggaatgatctgtatttgttgttgttgatg 14678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 62 - 349
Target Start/End: Original strand, 740 - 1027
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattga 160  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  740 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattga 839  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||| |||| || |||||||||||||||||| || |||||||||||| ||||||||    
T  840 gggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatct-tgttgttg 938  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttg 349  Q
     |||||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||||||||||||| ||  ||| ||||||||||    
T  939 atgtgatcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaaagatttgtgattgttgttg 1027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 62 - 355
Target Start/End: Complemental strand, 111948 - 111674
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 160  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  111948 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattga 111849  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||    
T  111848 gggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctg 111749  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||||||||||||||||                    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  111748 ctgtgatcataaattgattga--------------------aattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 111674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 73 - 355
Target Start/End: Original strand, 20437024 - 20437305
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    |||||||||||||| |||| |||||||| | |||||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  20437124 tgatgatgattctg-aggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 20437222  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||||||| ||||| ||||||||| |||||    
T  20437223 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 20437305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 41112100 - 41111884
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||  |||     
T  41112100 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaa 41112002  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  |   ||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  41112001 agttagggtttgatgatgattctgatgg--aatgagtaaagacggtgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 41111905  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  41111904 tgtaatccatgaattgattga 41111884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 20851132 - 20851187
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20851132 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 20857759 - 20857814
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20857759 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 21706331 - 21706276
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21706331 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 21710873 - 21710818
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21710873 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 181; Significance: 1e-97; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 72 - 355
Target Start/End: Original strand, 10195 - 10477
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 170  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 10294  T
Q  171 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 270  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  10295 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 10393  T
Q  271 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| ||||||||| |||||    
T  10394 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgttgttgatg 10477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 181; Significance: 1e-97; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 72 - 355
Target Start/End: Original strand, 1525 - 1807
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 170  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 1624  T
Q  171 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 270  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  1625 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 1723  T
Q  271 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||||||| ||| ||||| ||||||||| |||||    
T  1724 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgttgttgatg 1807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 176; Significance: 1e-94; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 62 - 355
Target Start/End: Original strand, 1887 - 2179
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 160  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  1887 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 1986  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  1987 gggttagggtttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttg 2084  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||||||| |||||||| | | ||||| ||||| ||||||||||||||||||||| ||||||||||| | |||||| |||||||| |||||    
T  2085 ctgtgatcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgtacgatggtggaataatctgtaaatgttgttgttgatg 2179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 62 - 355
Target Start/End: Original strand, 8564 - 8856
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 160  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  8564 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 8663  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| |||||||||||||||  ||||||||    
T  8664 gggttagggtttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttg 8761  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    |||||||||||| |||||||| | | || || ||||| ||||||||||||||||||||| ||||||||||| | |||||| |||||||| |||||    
T  8762 ctgtgatcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgtacgatggtggaataatctgtaaatgttgttgttgatg 8856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 171; Significance: 9e-92; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 62 - 355
Target Start/End: Complemental strand, 11407 - 11116
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagata-aattga 160  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  11407 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattga 11308  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||||||||||| |||| |||| ||||| |||||||||||||||||||||| | ||||||| ||||||| ||||||| ||  |||||    
T  11307 gggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactgttg 11209  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatg 355  Q
    ||||||||| ||||||||||| || ||| |  ||||||||||||||||||| || |||||||||||||| ||| |||| |||||||||| |||||    
T  11208 ctgtgatcacaaattgattga-aaatataattgattggatgaattgatgaagttttgtatgatggtggattgatctgt-attgttgttgttgatg 11116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 62 - 346
Target Start/End: Complemental strand, 356 - 75
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  356 ttctgcaaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 258  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
    |||||||||||||||||||||||| |||| |||||||||| |||||||||||| | ||||| |||  |||||||| |||| |||||||||||||| |||     
T  257 ggttagggtttgatgatgattctg-aggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattga 159  T
Q  262 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 346  Q
    ||||||||||||||| |||| ||||||||  | |||||| |||||||||||   ||||| |||||||| ||| ||||| ||||||    
T  158 tgtgatcataaattggttga-aattatgattggttggataaattgatgaataattgtataatggtggagtgatctgtatttgttg 75  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 61 - 349
Target Start/End: Complemental strand, 18236 - 17948
Alignment:
Q  61 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattg 159  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||| ||| |||| ||||||||    
T  18236 attctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattg 18137  T
Q  160 agggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctg-ttgtaatataatgttcagaatgaaaacttaatctatgttgt 258  Q
    ||||||| ||||| ||||||||||| | ||||||| ||||||  |||||||||||||| ||||||| | |||| |||||||||||||||| |||||||||    
T  18136 agggttaaggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctatgttgt 18038  T
Q  259 tgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttg 349  Q
    |||||||||||| |||||||||| ||||  ||  |||||||| ||||||||||| | ||||||||||||  |||| |||||||||||||||    
T  18037 tgctgtgatcatgaattgattga-aatttggattgattggataaattgatgaatatttgtatgatggtgtgatgatctgtaattgttgttg 17948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 122; Significance: 2e-62; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 75 - 357
Target Start/End: Original strand, 3295 - 3576
Alignment:
Q  75 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 172  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||||  |||||| ||||||||||||||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggg-gataaaattgagggttagggttt 3393  T
Q  173 gatgatgattctgaagggaaatgggtaat-aatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    |||||||||||||| ||||| |||||||| ||||||||||||| ||||||||| | ||||||||||||||| ||||||||||  |||||||||||||| |    
T  3394 gatgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatcaca 3492  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatgtc 357  Q
    |||||||||| || ||| |  ||||||||||||||||||| || |||||||||||||||||| |||| |||||||||| |||||||    
T  3493 aattgattga-aaatataattgattggatgaattgatgaagttttgtatgatggtggaatgatctgt-attgttgttgttgatgtc 3576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 62 - 269
Target Start/End: Complemental strand, 30923 - 30715
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattga 160  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  30923 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattga 30824  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    || ||||||||||||||||||| ||| |||||  | ||||  |||||||||| | ||||||||  | |||| |||||||||  | ||||||||  |||||    
T  30823 ggattagggtttgatgatgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgcagaatgaattcctaatctataatgttg 30724  T
Q  261 ctgtgatca 269  Q
     ||||||||    
T  30723 atgtgatca 30715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 113; Significance: 4e-57; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 75 - 357
Target Start/End: Original strand, 3624 - 3904
Alignment:
Q  75 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 172  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 3722  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    |||||||||||||| ||| | |||||||| |||||||||||| ||||||||| | |||||| |||||||| ||||||||||  ||||| |||||||||||    
T  3723 gatgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactgttgttgtgatcataa 3821  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgatgatgtc 357  Q
    ||||||||| || ||| |  ||||||||||||||||||| || ||||||||||||||||||  ||| |||||||||| |||||||    
T  3822 attgattga-aaatataattgattggatgaattgatgaagttttgtatgatggtggaatgatttgt-attgttgttgttgatgtc 3904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 232 - 355
Target Start/End: Complemental strand, 3558 - 3435
Alignment:
Q  232 tcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaat 331  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| | |||||||||||||||||||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgtatgatggtggaat 3459  T
Q  332 gagctgtaattgttgttgatgatg 355  Q
    || ||||||||||||||| |||||    
T  3458 gatctgtaattgttgttgttgatg 3435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 67 - 355
Target Start/End: Original strand, 1727 - 2013
Alignment:
Q  67 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 166  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  1727 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 1825  T
Q  167 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtga 266  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||  |    
T  1826 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctgcaa 1923  T
Q  267 t-cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgatgatg 355  Q
    | ||| || ||||||| | || |||   |||| |||||||||||||| |  | |||||||| ||||||  ||||||||||||||| |||||    
T  1924 tccattaactgattga-atttgtgatgaattgtatgaattgatgaatattgggatgatggtagaatgattctgtaattgttgttgttgatg 2013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 67 - 263
Target Start/End: Original strand, 5750 - 5943
Alignment:
Q  67 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 166  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  5750 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 5848  T
Q  167 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 263  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  5849 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 5e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 991 - 904
Alignment:
Q  68 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 155  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 8136 - 8049
Alignment:
Q  68 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 155  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 216 - 312
Target Start/End: Complemental strand, 901 - 806
Alignment:
Q  216 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 312  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  901 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 216 - 312
Target Start/End: Complemental strand, 8046 - 7951
Alignment:
Q  216 tgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 312  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  8046 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 7951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 45268 - 45386
Alignment:
Q  66 gcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggt 164  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |    
T  45268 gcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaat 45366  T
Q  165 tagggtttgatgatgattct 184  Q
    ||||||||||||||||||||    
T  45367 tagggtttgatgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 40521 - 40587
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  40521 ttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 116951 - 116887
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 17710 - 17643
Alignment:
Q  62 ttctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    |||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  17710 ttctgcaaaatctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

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Target: scaffold0019 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 135539 - 135473
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  135539 ttctgaaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

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Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 8 - 72
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

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Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 22582 - 22646
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaat 126  Q
    ||||||||| | |||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  22582 ttctgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

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Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

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Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

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Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 1515 - 1453
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 124  Q
    |||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||    
T  1515 ttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

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Target: scaffold0261 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 262
Target Start/End: Original strand, 23559 - 23760
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaaga-taaattga 160  Q
    ||||||||  |||||||||||||| || ||||| |  || |||||||| ||||||||||||||||| | ||||  | |||||| | |||||  |||||||    
T  23559 ttctgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaaaagaatagttcttgaagacaaaattga 23658  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    |  ||||||| ||||| ||||| |||| | |||   |||| ||||||||| | | ||||||||| | |||||||| ||||   ||||||||||  |||||    
T  23659 gaattagggtgtgatgctgattttgaaagaaaagatgtaagaatcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctataatgttg 23758  T
Q  261 ct 262  Q
    ||    
T  23759 ct 23760  T

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Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 780 - 680
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagataaattga 160  Q
    |||||||||||||||||||||||| || ||||| || || ||| |||| ||||||||||| |||||| ||||||  | |||||| | ||| |||||||||    
T  780 ttctgcaaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattga 681  T
Q  161 g 161  Q
    |    
T  680 g 680  T

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Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 5857 - 5941
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 156  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  5857 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 5941  T

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Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 1441 - 1321
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 171  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 1342  T
Q  172 tgatgatgattctgaagggaa 192  Q
    ||||| ||||| |||| ||||    
T  1341 tgatgctgattttgaaaggaa 1321  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

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Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 59 - 94
Target Start/End: Complemental strand, 5522 - 5487
Alignment:
Q  59 ttattctgcaaaactaaggtaagggtgagactatct 94  Q
    ||||||||||||||||||||||||||||||||||||    
T  5522 ttattctgcaaaactaaggtaagggtgagactatct 5487  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 493019 - 493099
Alignment:
Q  63 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 144  Q
    |||||||  ||||||||||||||||| ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  493019 tctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 39503 - 39563
Alignment:
Q  69 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    |||| |||||||||||||| ||| ||||| || |||||||| ||||||||| |||||||||    
T  39503 aaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 262
Target Start/End: Complemental strand, 73337 - 73149
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 173  Q
    ||||||||||| || ||||| || || |||||||| |||||||| |||||||| | ||||| | |||| | | |||||| ||||||||  ||||||| ||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaattgagaattagggtgtg 73238  T
Q  174 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctatgttgttgct 262  Q
    ||| ||||| |||| | ||  | |||| ||||||||| | | ||||||||| | |||||| | ||||   ||||||||||  |||||||    
T  73237 atgttgattttgaaagaaacggtgtaagaatcatgtttaatgtgttgtaatttgatgttccgtatgatttcttaatctataatgttgct 73149  T

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Target: scaffold0348 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 9391 - 9336
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  9391 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 10294 - 10239
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  10294 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 135493 - 135438
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||| |||||| ||||| || ||| ||||||| |||||||||||||||||    
T  135493 ctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 10550 - 10634
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 156  Q
    |||||||||| ||| || ||||| || || ||| |||| ||||||||||||||||| | ||||| | |||||| | |||||||||    
T  10550 ctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaatagaatagttcttgaagataaa 10634  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 80293 - 80321
Alignment:
Q  59 ttattctgcaaaactaaggtaagggtgag 87  Q
    |||||||||||||||||||||||||||||    
T  80293 ttattctgcaaaactaaggtaagggtgag 80321  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 87
Target Start/End: Original strand, 100015 - 100043
Alignment:
Q  59 ttattctgcaaaactaaggtaagggtgag 87  Q
    |||||||||||||||||||||||||||||    
T  100015 ttattctgcaaaactaaggtaagggtgag 100043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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