View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20553_high_43 (Length: 257)
Name: NF20553_high_43
Description: NF20553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20553_high_43 |
 |  |
|
| [»] chr7 (7 HSPs) |
 |  |
|
| [»] chr3 (5 HSPs) |
 |  |
|
| [»] scaffold0049 (1 HSPs) |
 |  |  |
|
| [»] chr2 (5 HSPs) |
 |  |
|
| [»] scaffold0007 (1 HSPs) |
 |  |
|
| [»] chr4 (11 HSPs) |
 |  |
|
| [»] scaffold0144 (1 HSPs) |
 |  |
|
| [»] scaffold0434 (1 HSPs) |
 |  |
|
| [»] chr6 (5 HSPs) |
 |  |
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| [»] chr1 (1 HSPs) |
 |  |
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| [»] scaffold0210 (2 HSPs) |
 |  |
|
| [»] chr8 (4 HSPs) |
 |  |
|
Alignment Details
Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 9954151 - 9953998
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
9954151 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttggccgcctttaaattgatttacggtttatattgtgatac |
9954052 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9954051 |
ggaagttgaatttataaacgctttgagataagaaattcttgcctttgtaatcta |
9953998 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 23409656 - 23409808
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||| ||||||||| ||||||||||||||| || |
|
|
| T |
23409656 |
attattgaagaagtttattgaatcatttttcttatctctgttcttaatgtttttattgcttggccgcctttcaattgatttacggtttatattgtgaaac |
23409755 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||| |||||||||||||||| |
|
|
| T |
23409756 |
agaagttgaatttataaacg-tttgagataagagattcttgcctttgtaatcta |
23409808 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 30758610 - 30758763
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||| | ||||||| |||||||| |||| | |||||||||||||| ||||||||||||||| || |
|
|
| T |
30758610 |
attattgatgaaacttattgaattgtttttcttatctccatgcttaatgcttttattgattgatcacctttaaattgatttacggtttatattgtgaaac |
30758709 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
30758710 |
ggaagttgaatttataaacgctttgagataagaaattcttgcctttgtaatcta |
30758763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 25137059 - 25137212
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||||| | ||||||| |||||||| |||| | |||||||||||||| ||||||||||||||| || |
|
|
| T |
25137059 |
attattgatgaaacttattgaattatttttcttatctccatgcttaatgcttttattgattgatcacctttaaattgatttacggtttatattgtgaaac |
25137158 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
25137159 |
ggaagttgaatttatatacgttttgagataagaaattcttgcctttgtaatcta |
25137212 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 104 - 254
Target Start/End: Original strand, 7747451 - 7747601
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||||||| || |||||| ||||||||||||| | ||||||| |||||||| || | | |||||||||||||| ||||||||||||||| || |
|
|
| T |
7747451 |
attattgatgaaacttcttgaattgtttttcttatctccatgcttaatgcttttattgattaatcacctttaaattgatttacggtttatattgtgaaac |
7747550 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaat |
254 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
7747551 |
ggaagttgaatttataaactctttgagataagaaattcttgcctttgtaat |
7747601 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 42779792 - 42779640
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||||||| ||||||||| |||| ||||||| | |||||| |||||||| |||| | |||||||||||||| ||||||||||||||| || |
|
|
| T |
42779792 |
attattgatgaaacttattgaattgttttaattatctccatgcttaatacttttattgattgatcacctttaaattgatttacggtttatattgtgaaac |
42779693 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
| |||| |||||||||||||| ||||||||||| || ||||||||| |||||| |
|
|
| T |
42779692 |
gaaagtggaatttataaacgc-ttgagataagagatccttgcctttgcaatcta |
42779640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 23688733 - 23688671
Alignment:
| Q |
195 |
ttgtgatacggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
23688733 |
ttgtgaaacggaagttgaatttataaatgctttgagataagaaattcttgcctttgtaatcta |
23688671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 130; Significance: 2e-67; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 11773725 - 11773572
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||||||||||| |
|
|
| T |
11773725 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgcttttattgcttggccgcctttaaattgatttacggtttatattgtgatac |
11773626 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
11773625 |
ggaagttgaatttataaacgctttgagataataaattcttgcctttgtaatcta |
11773572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 27088789 - 27088637
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||| |||| | |||||||||||||| ||||||||||||| | || |
|
|
| T |
27088789 |
attattgatgaagtttattaaatcatttttcttatctctgttcttaatacttttattgattgatcacctttaaattgatttacggtttatattgtaaaac |
27088690 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||| | |||||||||||| ||||||||||||| ||||| |
|
|
| T |
27088689 |
ggaagttgaatttataaacac-ttgagataagaagtttttgcctttgtgatcta |
27088637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 559700 - 559854
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttt-tcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgata |
202 |
Q |
| |
|
|||||||||||| ||||||||| |||| ||||||||| | ||||||| |||||||| |||| | |||||||||||||| | | ||||||||||| | |
|
|
| T |
559700 |
attattgatgaaacttattgaatttttttttcttatctccatgcttaatgcttttattgattgatcacctttaaattgatttacagattatattgtgaaa |
559799 |
T |
 |
| Q |
203 |
cggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||||||||||| ||| |||||| |||||||||||||||| |
|
|
| T |
559800 |
cggaagttgaatttataaacgctttgacatatgaaattcttgcctttgtaatcta |
559854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 257
Target Start/End: Original strand, 36529788 - 36529902
Alignment:
| Q |
144 |
ttcttaatg-tttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatacggaagttgaatttataaacgctttgagataagaaatttt |
242 |
Q |
| |
|
||||||||| ||||||||| |||| | |||||| ||||||| |||||||| |||||| |||||||| ||||||||||||||||||| |||||| || | |
|
|
| T |
36529788 |
ttcttaatgctttttattgattgatcacctttaatttgatttacggtttatcttgtgaaacggaagtggaatttataaacgctttgaaataagagatcat |
36529887 |
T |
 |
| Q |
243 |
tgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
36529888 |
tgcctttgtaatcta |
36529902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 257
Target Start/End: Original strand, 36533231 - 36533345
Alignment:
| Q |
144 |
ttcttaatg-tttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatacggaagttgaatttataaacgctttgagataagaaatttt |
242 |
Q |
| |
|
||||||||| ||||||||| |||| | |||||| ||||||| |||||||| |||||| |||||||| ||||||||||||||||||| |||||| || | |
|
|
| T |
36533231 |
ttcttaatgctttttattgattgatcacctttaatttgatttacggtttatcttgtgaaacggaagtggaatttataaacgctttgaaataagagatcct |
36533330 |
T |
 |
| Q |
243 |
tgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
36533331 |
tgcctttgtaatcta |
36533345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 104 - 254
Target Start/End: Complemental strand, 38748 - 38598
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||| |||||||||||||| ||||||||||||||| || |
|
|
| T |
38748 |
attattgatgaagtttattgaatcatttttcttatctctgttcttaaagcttttattgcttggccgcctttaaattgatttacggtttatattgtgaaac |
38649 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaat |
254 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
38648 |
ggaagttgaatttataaacgctttgagataagaaattcttgcctttgtaat |
38598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 114; Significance: 7e-58; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 41363025 - 41363178
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||| || |
|
|
| T |
41363025 |
attattgaagaagtttattgaatcatttttcttatatcttttcttaatgcttttattgcttgaccgcctttaaattgatttacggtttatattgtgaaac |
41363124 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
41363125 |
agaagttaaatttataaacgctttgagataagaaattcttgactttgtaatcta |
41363178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 44679968 - 44679818
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||| ||| ||| |||||||||||||| |||| |||||||| || |
|
|
| T |
44679968 |
attattgatgaagtttattgaatcatttttcttatctctgttcttaatgcttgtattgtttggccgcctttaaattgatttacggt---tattgtgaaac |
44679872 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || |||||||| |||| |
|
|
| T |
44679871 |
ggaagttgaatttataaacgctttgagataagaaattctttcctttgtagtcta |
44679818 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 118 - 257
Target Start/End: Original strand, 28633817 - 28633955
Alignment:
| Q |
118 |
ttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatacggaagttgaattta |
217 |
Q |
| |
|
||||| ||| |||||||||||| || ||||||||| |||||||||||| ||| |||||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
28633817 |
ttattaaattatttttcttatccctgttcttaatgcttttattgcttggccgcctttaaattgatttacggtttatattgtgaaacggaagttgaattta |
28633916 |
T |
 |
| Q |
218 |
taaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||| | ||| ||||||| ||| |||||||||||||||| |
|
|
| T |
28633917 |
taaacac-ttgggataagagattcttgcctttgtaatcta |
28633955 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 120 - 257
Target Start/End: Complemental strand, 11925824 - 11925687
Alignment:
| Q |
120 |
attgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatacggaagttgaatttata |
219 |
Q |
| |
|
||||||| ||||||||||||| | ||||||| |||||||| |||| | ||||||||||||| ||||||||||||||| || ||||||||||||||| |
|
|
| T |
11925824 |
attgaattgtttttcttatctccatgcttaatgcttttattgattgatcacatttaaattgatttacggtttatattgtgaaactgaagttgaatttata |
11925725 |
T |
 |
| Q |
220 |
aacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
11925724 |
aacgctttgatataagaaattcttgcctttgtaatcta |
11925687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 33398079 - 33397966
Alignment:
| Q |
105 |
ttattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatacg |
204 |
Q |
| |
|
|||||||||||| |||| |||| |||||| |||||| | | ||||||||||||||| |||| || ||||||| | |||| | || ||||||||| || |
|
|
| T |
33398079 |
ttattgatgaagcttatcgaattatttttattatctttatatttaatgtttttattgattgatcgcctttaaacttatttacaattcatattgtgaaaca |
33397980 |
T |
 |
| Q |
205 |
gaagttgaatttat |
218 |
Q |
| |
|
|| ||| ||||||| |
|
|
| T |
33397979 |
gacgttaaatttat |
33397966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 275624 - 275776
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||| ||||||||||||||| || |
|
|
| T |
275624 |
attattgaagaagtttattgaatcatttttcttatctctgttcttaatgcttttattgcttggccgcctttaaattgatttacggtttatattgtgaaac |
275723 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||| |||||||||||||||| |
|
|
| T |
275724 |
ggaagttgaatttataaacg-tttgagataagagattcttgcctttgtaatcta |
275776 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 53436997 - 53437150
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| || |||||| |||||||||||| ||| |||||||||||| | ||||||||||||||| || |
|
|
| T |
53436997 |
attattgaagaagtttattgaatcatttttcttatctctgttattaatgcttttattgcttggccgcctttaaattgatatacggtttatattgtgaaac |
53437096 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
53437097 |
ggaagttgaatttataaacgctttgaaataagaaattcttgcctttgtaatcta |
53437150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 53438430 - 53438583
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| || |||||| |||||||||||| ||| |||||||||||| | ||||||||||||||| || |
|
|
| T |
53438430 |
attattgaagaagtttattgaatcatttttcttatctctgttattaatgcttttattgcttggccgcctttaaattgatatacggtttatattgtgaaac |
53438529 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |||||||||||||||| |
|
|
| T |
53438530 |
ggaagttgaatttataaacgctttgaaataagaaattcttgcctttgtaatcta |
53438583 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 55585190 - 55585037
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||| ||| |||||||| |||| ||||||||| ||||| || |
|
|
| T |
55585190 |
attattgatgaagtttattgaatcatttttcttatctatgttcttaatgcttttattgcttggccgcctttaaatatatttacggtttatactgtgaaac |
55585091 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
55585090 |
ggaagttgaatttataaacgctttgagatgagaaattcttgcctttgtaatcta |
55585037 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 104 - 254
Target Start/End: Complemental strand, 46671381 - 46671232
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| | ||||||| |||||||||||| ||| |||||||||||||| ||||||||||||||| || |
|
|
| T |
46671381 |
attattgaataagtttattgaatcatttttcttatctctgtgcttaatgcttttattgcttggccgcctttaaattgatttacggtttatattgtgaaac |
46671282 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaat |
254 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| ||| ||||||||| |
|
|
| T |
46671281 |
ggaagttgaatttataaacgc-ttgagataagaaattcttgtctttgtaat |
46671232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 16420217 - 16420369
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| | ||||||||| | |||||||||||||| |||||||||||||| ||||||||||||||| || |
|
|
| T |
16420217 |
attattgaagaagtttattgaatcatttttcttatctttgttcttaatgctattattgcttgaccgcctttaaattgatttacggtttatattgtgaaac |
16420316 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||| ||||||||||||| || ||||||||||| ||| |||||||||||||||| |
|
|
| T |
16420317 |
ggaaattgaatttataaaggc-ttgagataagagattcttgcctttgtaatcta |
16420369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 3216307 - 3216154
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||||| | ||||||| |||||||| |||| | |||||||||||||| ||||||||||||||| || |
|
|
| T |
3216307 |
attattgatgaaacttattgaattatttttcttatctccatgcttaatgcttttattgattgatcacctttaaattgatttacggtttatattgtgaaac |
3216208 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
3216207 |
ggaagttgaatttataaatactttgagataagaaattcttgcctttgtaatcta |
3216154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 6673651 - 6673498
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||| | ||||||| |||||||| |||| | |||||||||||||| |||||||| |||||| || |
|
|
| T |
6673651 |
attattgatgaaacttattgaattgtttttcttatctccatgcttaatgcttttattgattgatcacctttaaattgatttacggtttattttgtgaaac |
6673552 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
6673551 |
ggaagttgaatttataaacgctttgagataagaaattcttgcctttgtaatcta |
6673498 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 9353223 - 9353070
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
||||||||| || ||||||||| ||||||||||||| | ||||||| |||||||| |||| | |||||||||||||| ||||||||||||||| || |
|
|
| T |
9353223 |
attattgattaaacttattgaattgtttttcttatctccatgcttaatgcttttattgattgatcacctttaaattgatttacggtttatattgtgaaac |
9353124 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9353123 |
ggaagttgaatttataaacgctttgagataagaaattcttgcctttgtaatcta |
9353070 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 245
Target Start/End: Original strand, 987486 - 987607
Alignment:
| Q |
124 |
aatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatacggaagttgaatttataaacg |
223 |
Q |
| |
|
|||||||||||||| |||| ||||||||| |||||||||||| | || ||||| ||||||| | |||||||||| | | |||||||||||||||||| | |
|
|
| T |
987486 |
aatcatttttcttaactctgttcttaatgcttttattgcttggctgtgtttaatttgatttatgatttatattgtaaaaaggaagttgaatttataaatg |
987585 |
T |
 |
| Q |
224 |
ctttgagataagaaatttttgc |
245 |
Q |
| |
|
|||| |||||||||||| |||| |
|
|
| T |
987586 |
ctttaagataagaaattcttgc |
987607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 205 - 257
Target Start/End: Complemental strand, 9342021 - 9341969
Alignment:
| Q |
205 |
gaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
9342021 |
gaagttgaatttataaacgctttgagataagaaattcttgcctttgtaatcta |
9341969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 236
Target Start/End: Complemental strand, 42515646 - 42515517
Alignment:
| Q |
108 |
ttgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttatt-gcttgaccgtctttaaattgatttgcggtttatattgtgatacgga |
206 |
Q |
| |
|
|||||||| ||| ||||| ||||||||||||| | ||||||| ||||||| |||||| | || | || |||||| ||||| ||||||||| || |
|
|
| T |
42515646 |
ttgatgaaacttactgaattatttttcttatcttcatgcttaatgcttttattcgcttgatcatcgattaactgatttacggttcatattgtgaaacaag |
42515547 |
T |
 |
| Q |
207 |
agttgaatttataaacgctttgagataaga |
236 |
Q |
| |
|
|||||||||||| || |||||||||||||| |
|
|
| T |
42515546 |
agttgaatttatgaatgctttgagataaga |
42515517 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0144
Description:
Target: scaffold0144; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 40263 - 40111
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||| | ||||||||||||| || |
|
|
| T |
40263 |
attattgaagaagtttattgaatcatttttcttatctctgttcttaatgcttttattgcttggccgcctttaaattgatttactgtttatattgtgaaac |
40164 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |||| ||||||||||| |
|
|
| T |
40163 |
ggaagttgaatttataaacgc-ttgagataagaaattcttgcttttgtaatcta |
40111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0434 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0434
Description:
Target: scaffold0434; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 11143 - 11296
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||| || ||||||||||| |||||||||||| || | |
|
|
| T |
11143 |
attattgatgaagtttattgaatcatttttcttatctctgctcttaatgcttttattgcttgcccgcctctaaattgatttacggtttatattgggaatc |
11242 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| || ||||||||||||| |
|
|
| T |
11243 |
ggaagttgaatttataaacactttgagataagaaattctttcctttgtaatcta |
11296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 102; Significance: 9e-51; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 35023710 - 35023862
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||| | ||||||||||||| || |
|
|
| T |
35023710 |
attattgaataagtttattgaatcatttttcttatctctgttcttaatgcttttattgcttggccgcctttaaattgatttacagtttatattgtgaaac |
35023809 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||||| |||||||||||||||| |
|
|
| T |
35023810 |
ggaagttgaatttataaatgc-ttgagataagaaattattgcctttgtaatcta |
35023862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 2879957 - 2880114
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||||||| | ||||||||||||||| || |
|
|
| T |
2879957 |
attattgaagaagtttattgaatcatttttcttatctctattcttaatgcttttattgcttggccgcctttaaattgatatacggtttatattgtgaaac |
2880056 |
T |
 |
| Q |
204 |
ggaagt----tgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||| |||||||||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
2880057 |
agaagttgaatgaatttataaacgctttcagataagaaattattgcctttgtaatcta |
2880114 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 28871703 - 28871856
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||| | ||||||| |||||||| |||| | |||||||||||||| ||||||||||||||| || |
|
|
| T |
28871703 |
attattgatgaaacttattgaattgtttttcttatctccatgcttaatgcttttattgattgatcacctttaaattgatttacggtttatattgtgaaac |
28871802 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
28871803 |
ggaagttgaatttataaacgctttgagataagaaattcttgcctttgtaatcta |
28871856 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 105 - 257
Target Start/End: Original strand, 33354022 - 33354174
Alignment:
| Q |
105 |
ttattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatacg |
204 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||| | ||||||| |||||||| |||| | |||||||||||||| ||||||||||||||| ||| |
|
|
| T |
33354022 |
ttattgatgaaacttattgaattatttttcttatctccatgcttaatgcttttattgattgatcacctttaaattgatttacggtttatattgtgaaacg |
33354121 |
T |
 |
| Q |
205 |
gaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
| || |||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
33354122 |
ggggtggaatttataaacgctttgagataagaaattcttgcctttgtaatcta |
33354174 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 252
Target Start/End: Original strand, 20025814 - 20025935
Alignment:
| Q |
132 |
ttcttatctcttttcttaatgtttttattgcttgaccgtcttta--aattgatttgcggtttatattgtgatacggaagttgaatttataaacgctttga |
229 |
Q |
| |
|
|||||||||| ||||||||| |||||| | |||||| | | || |||||||| |||||||||||||| | ||||| ||||||||||||||| || |
|
|
| T |
20025814 |
ttcttatctcagttcttaatgcttttatcgtttgaccatatatataaattgattcatggtttatattgtgaatcaaaagtttaatttataaacgctt-ga |
20025912 |
T |
 |
| Q |
230 |
gataagaaatttttgcctttgta |
252 |
Q |
| |
|
||||||||||| ||||||||||| |
|
|
| T |
20025913 |
gataagaaattattgcctttgta |
20025935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 36215737 - 36215890
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||| | ||||||| |||||||| |||| | |||||||||||||| ||||||||||||||| || |
|
|
| T |
36215737 |
attattgatgaaacttattgaattgtttttcttatctccatgcttaatgcttttattgattgatcacctttaaattgatttacggtttatattgtgaaac |
36215836 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
36215837 |
ggaagttgaatttataaacgctttgagataagaaattcttgcctttgtaatcta |
36215890 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0210 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0210
Description:
Target: scaffold0210; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 23459 - 23306
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||| | ||||||| |||||||| |||| | ||||||||||||||| |||||||| |||||| | |
|
|
| T |
23459 |
attattgatgaaacttattgaattgtttttcttatctccatgcttaatgcttttattgattgatcatctttaaattgatttacggtttattttgtgaaat |
23360 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
23359 |
tgaagttgaatttataaacgctttgagataagaaattcttgcctttgtaatcta |
23306 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0210; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 104 - 257
Target Start/End: Complemental strand, 24463 - 24310
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||| | ||||||| |||||||| |||| | ||||||||||||||| |||||||| |||||| | |
|
|
| T |
24463 |
attattgatgaaacttattgaattgtttttcttatctccatgcttaatgcttttattgattgatcatctttaaattgatttacggtttattttgtgaaat |
24364 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
24363 |
tgaagttgaatttataaacgctttgagataagaaattcttgcctttgtaatcta |
24310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 9330316 - 9330469
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
||||||| |||| ||||||||| ||||||||||||| | ||||||| |||||||| |||| | |||||||||||||| ||||||||||||||| || |
|
|
| T |
9330316 |
attattgctgaaacttattgaattgtttttcttatctccatgcttaatgcttttattgattgatcacctttaaattgatttacggtttatattgtgaaac |
9330415 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
9330416 |
ggaagttgaatttataaacgcttcgagataagaaattcttgcctttgtaatcta |
9330469 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 104 - 257
Target Start/End: Original strand, 10332880 - 10333032
Alignment:
| Q |
104 |
attattgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatac |
203 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||| | ||||||| |||||||| |||| |||||||||||||| ||||||||||||||| || |
|
|
| T |
10332880 |
attattgatgaaacttattgaatt-tttttcttatctccatgcttaatgcttttattgattgataacctttaaattgatttacggtttatattgtgaaac |
10332978 |
T |
 |
| Q |
204 |
ggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
10332979 |
agaagttgaatttataaacgctttgagataagaaattcttgcctttgtaatcta |
10333032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 227
Target Start/End: Original strand, 32233158 - 32233277
Alignment:
| Q |
108 |
ttgatgaagtttattgaatcatttttcttatctcttttcttaatgtttttattgcttgaccgtctttaaattgatttgcggtttatattgtgatacggaa |
207 |
Q |
| |
|
|||| |||| ||||||||| ||||||||||||||| || ||||| ||||||||||||||||||||||| ||||||| ||||||||| ||| || || |
|
|
| T |
32233158 |
ttgaagaagcttattgaatgatttttcttatctctgagctaaatgtatttattgcttgaccgtctttaaactgatttgtagtttatattatgaaacataa |
32233257 |
T |
 |
| Q |
208 |
gttgaatttataaacgcttt |
227 |
Q |
| |
|
||||||||||||||| |||| |
|
|
| T |
32233258 |
gttgaatttataaacacttt |
32233277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 40454967 - 40455048
Alignment:
| Q |
176 |
aattgatttgcggtttatattgtgatacggaagttgaatttataaacgctttgagataagaaatttttgcctttgtaatcta |
257 |
Q |
| |
|
||||||||| ||||||||||||| | || ||||||||||||| ||||||||||||||| ||||| ||||||||||| |||| |
|
|
| T |
40454967 |
aattgatttacggtttatattgttaaacataagttgaatttatgaacgctttgagataaaaaattattgcctttgtagtcta |
40455048 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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