View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20553_low_25 (Length: 376)

Name: NF20553_low_25
Description: NF20553
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20553_low_25
NF20553_low_25
[»] chr2 (23 HSPs)
chr2 (197-357)||(17420932-17421092)
chr2 (197-357)||(28469006-28469166)
chr2 (197-357)||(21998555-21998715)
chr2 (197-357)||(45428956-45429116)
chr2 (197-357)||(39947965-39948126)
chr2 (197-357)||(32955905-32956062)
chr2 (234-353)||(25965189-25965308)
chr2 (206-336)||(29401160-29401291)
chr2 (219-336)||(20938282-20938399)
chr2 (219-336)||(45284558-45284675)
chr2 (219-336)||(45291921-45292038)
chr2 (206-336)||(10828581-10828712)
chr2 (206-336)||(25515366-25515496)
chr2 (206-336)||(36655906-36656037)
chr2 (219-336)||(3940299-3940416)
chr2 (219-336)||(5352351-5352468)
chr2 (276-357)||(7185394-7185475)
chr2 (219-336)||(15831514-15831631)
chr2 (219-336)||(30496517-30496634)
chr2 (219-336)||(43978906-43979023)
chr2 (219-336)||(43539308-43539425)
chr2 (238-313)||(45136881-45136956)
chr2 (197-253)||(22686849-22686904)
[»] chr5 (18 HSPs)
chr5 (197-357)||(28877008-28877168)
chr5 (197-357)||(8580053-8580213)
chr5 (197-357)||(28241347-28241507)
chr5 (197-357)||(7757689-7757850)
chr5 (206-357)||(14246-14397)
chr5 (197-358)||(8701771-8701933)
chr5 (197-354)||(17658690-17658848)
chr5 (197-357)||(19228219-19228380)
chr5 (197-357)||(42537514-42537675)
chr5 (197-357)||(42942034-42942194)
chr5 (197-357)||(38968462-38968624)
chr5 (197-357)||(512319-512480)
chr5 (219-336)||(19040687-19040804)
chr5 (219-336)||(40624484-40624601)
chr5 (206-336)||(5197359-5197490)
chr5 (220-336)||(27673224-27673340)
chr5 (219-336)||(30705522-30705639)
chr5 (209-336)||(20422335-20422463)
[»] chr4 (36 HSPs)
chr4 (197-357)||(21022436-21022596)
chr4 (197-357)||(40357828-40357988)
chr4 (197-357)||(30726289-30726449)
chr4 (197-357)||(1089132-1089292)
chr4 (197-357)||(1308662-1308822)
chr4 (197-357)||(50275099-50275260)
chr4 (197-357)||(37021630-37021791)
chr4 (197-357)||(51683567-51683728)
chr4 (197-357)||(48256118-48256279)
chr4 (197-357)||(50901845-50902005)
chr4 (197-357)||(55407334-55407495)
chr4 (219-357)||(67956-68094)
chr4 (219-357)||(46436609-46436747)
chr4 (222-336)||(41798568-41798682)
chr4 (206-336)||(50023099-50023230)
chr4 (219-336)||(9892838-9892955)
chr4 (206-336)||(11050079-11050210)
chr4 (206-336)||(21538008-21538139)
chr4 (206-336)||(50030217-50030348)
chr4 (219-336)||(6181360-6181477)
chr4 (219-336)||(49090806-49090923)
chr4 (219-336)||(49165419-49165536)
chr4 (206-336)||(10752983-10753114)
chr4 (206-336)||(10966752-10966883)
chr4 (219-336)||(50193864-50193982)
chr4 (219-326)||(30704419-30704526)
chr4 (197-334)||(14315772-14315910)
chr4 (219-336)||(31422083-31422201)
chr4 (219-336)||(44679645-44679762)
chr4 (221-336)||(3184342-3184457)
chr4 (221-336)||(3185456-3185571)
chr4 (221-336)||(3185664-3185779)
chr4 (200-334)||(14297523-14297658)
chr4 (206-334)||(41933179-41933308)
chr4 (206-334)||(11083562-11083691)
chr4 (220-326)||(4719949-4720055)
[»] chr8 (28 HSPs)
chr8 (200-357)||(15036279-15036436)
chr8 (197-357)||(39602080-39602241)
chr8 (197-357)||(42485086-42485246)
chr8 (197-357)||(39846533-39846694)
chr8 (197-357)||(489177-489337)
chr8 (197-357)||(39938763-39938924)
chr8 (197-357)||(43211870-43212031)
chr8 (206-357)||(39252376-39252528)
chr8 (197-357)||(5303768-5303929)
chr8 (197-357)||(43188414-43188575)
chr8 (219-357)||(40076820-40076958)
chr8 (197-357)||(45064606-45064756)
chr8 (219-342)||(37327163-37327286)
chr8 (197-357)||(34822564-34822725)
chr8 (206-336)||(35552051-35552182)
chr8 (206-336)||(24249868-24249999)
chr8 (197-336)||(2984508-2984648)
chr8 (197-357)||(41249636-41249781)
chr8 (206-336)||(20857671-20857802)
chr8 (219-336)||(25097-25214)
chr8 (219-336)||(1052910-1053027)
chr8 (219-336)||(23021891-23022008)
chr8 (219-336)||(26659832-26659949)
chr8 (206-306)||(34371450-34371551)
chr8 (211-336)||(45128135-45128261)
chr8 (206-336)||(5677456-5677587)
chr8 (318-357)||(25864609-25864648)
chr8 (220-334)||(22495305-22495419)
[»] chr7 (28 HSPs)
chr7 (197-357)||(15073776-15073936)
chr7 (197-357)||(42507575-42507735)
chr7 (197-357)||(10517345-10517506)
chr7 (197-357)||(17835441-17835602)
chr7 (197-357)||(47776699-47776860)
chr7 (197-353)||(27453166-27453323)
chr7 (197-357)||(39460893-39461054)
chr7 (197-357)||(47672632-47672793)
chr7 (199-357)||(37340669-37340828)
chr7 (197-353)||(34738735-34738892)
chr7 (197-357)||(9494343-9494503)
chr7 (197-357)||(36977963-36978124)
chr7 (197-357)||(14689605-14689766)
chr7 (219-336)||(41880876-41880993)
chr7 (219-336)||(35609986-35610103)
chr7 (219-336)||(48403743-48403860)
chr7 (220-336)||(556217-556333)
chr7 (206-336)||(5541096-5541227)
chr7 (219-336)||(45257374-45257490)
chr7 (219-336)||(46740117-46740234)
chr7 (206-322)||(16675186-16675303)
chr7 (206-322)||(17649554-17649671)
chr7 (220-336)||(17741019-17741135)
chr7 (219-336)||(9370960-9371073)
chr7 (256-336)||(17465328-17465408)
chr7 (256-336)||(17587806-17587886)
chr7 (219-254)||(17462864-17462899)
chr7 (219-254)||(17590315-17590350)
[»] chr1 (25 HSPs)
chr1 (197-357)||(19925107-19925267)
chr1 (197-357)||(30890426-30890586)
chr1 (197-357)||(31783275-31783436)
chr1 (197-357)||(35258420-35258581)
chr1 (224-357)||(47502680-47502813)
chr1 (197-357)||(45825241-45825403)
chr1 (197-357)||(19527090-19527251)
chr1 (197-357)||(51321079-51321240)
chr1 (197-357)||(52802496-52802657)
chr1 (197-357)||(23275650-23275812)
chr1 (197-357)||(49857493-49857651)
chr1 (206-336)||(47656256-47656386)
chr1 (206-336)||(21141413-21141544)
chr1 (219-336)||(2365622-2365739)
chr1 (219-336)||(19156401-19156518)
chr1 (206-336)||(50343525-50343656)
chr1 (219-336)||(3731951-3732068)
chr1 (219-336)||(13639593-13639710)
chr1 (219-336)||(26876043-26876160)
chr1 (206-336)||(97504-97635)
chr1 (219-336)||(22524521-22524636)
chr1 (206-336)||(2424924-2425053)
chr1 (220-336)||(17514267-17514383)
chr1 (219-295)||(38127052-38127128)
chr1 (248-336)||(8474171-8474259)
[»] chr3 (37 HSPs)
chr3 (205-357)||(4007878-4008031)
chr3 (205-357)||(3976071-3976224)
chr3 (197-357)||(42165527-42165688)
chr3 (197-357)||(47073754-47073915)
chr3 (197-357)||(44230078-44230239)
chr3 (197-357)||(50216425-50216586)
chr3 (197-357)||(20917564-20917725)
chr3 (197-357)||(20926526-20926687)
chr3 (197-357)||(50963319-50963480)
chr3 (234-357)||(3501477-3501600)
chr3 (197-357)||(30255549-30255710)
chr3 (197-357)||(42805809-42805970)
chr3 (197-357)||(49195994-49196155)
chr3 (197-357)||(42756518-42756677)
chr3 (197-348)||(48563301-48563453)
chr3 (219-357)||(597123-597261)
chr3 (206-357)||(48889108-48889260)
chr3 (206-336)||(16611463-16611594)
chr3 (206-336)||(22047659-22047790)
chr3 (219-336)||(52390966-52391083)
chr3 (205-336)||(17567619-17567751)
chr3 (217-336)||(41612753-41612872)
chr3 (219-336)||(2274484-2274601)
chr3 (219-336)||(29009245-29009362)
chr3 (219-336)||(36127822-36127939)
chr3 (219-336)||(42903760-42903877)
chr3 (219-336)||(46389347-46389464)
chr3 (219-336)||(50480354-50480471)
chr3 (219-336)||(54386509-54386626)
chr3 (206-336)||(20351030-20351161)
chr3 (219-336)||(49144033-49144149)
chr3 (278-357)||(51807334-51807413)
chr3 (219-336)||(34045762-34045878)
chr3 (219-336)||(46701595-46701712)
chr3 (220-326)||(4178199-4178305)
chr3 (220-326)||(4172201-4172307)
chr3 (220-334)||(31045165-31045279)
[»] scaffold0293 (1 HSPs)
scaffold0293 (197-357)||(276-436)
[»] scaffold0180 (1 HSPs)
scaffold0180 (197-356)||(15170-15330)
[»] chr6 (13 HSPs)
chr6 (197-357)||(31769070-31769231)
chr6 (197-357)||(6320110-6320271)
chr6 (197-357)||(24088329-24088490)
chr6 (206-335)||(26423384-26423514)
chr6 (219-336)||(6201534-6201651)
chr6 (219-336)||(11688501-11688618)
chr6 (219-336)||(22301566-22301683)
chr6 (219-336)||(30829222-30829339)
chr6 (220-336)||(21600990-21601106)
chr6 (206-336)||(3501555-3501686)
chr6 (206-336)||(24722314-24722445)
chr6 (219-336)||(27617101-27617218)
chr6 (248-324)||(3381182-3381258)
[»] scaffold0634 (1 HSPs)
scaffold0634 (219-357)||(7783-7921)
[»] scaffold0238 (1 HSPs)
scaffold0238 (206-335)||(18489-18619)
[»] scaffold0155 (1 HSPs)
scaffold0155 (219-315)||(10761-10857)
[»] scaffold0877 (1 HSPs)
scaffold0877 (219-336)||(4224-4341)
[»] scaffold0007 (2 HSPs)
scaffold0007 (221-334)||(251048-251161)
scaffold0007 (248-296)||(246180-246228)


Alignment Details
Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 17421092 - 17420932
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17421092 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 17420993  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17420992 tcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 17420932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 28469166 - 28469006
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  28469166 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatat 28469067  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  28469066 tcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 28469006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 21998715 - 21998555
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  21998715 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatat 21998616  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  21998615 tcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaac 21998555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 45429116 - 45428956
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  45429116 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatat 45429017  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| || ||||||||    
T  45429016 tcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacgtaggcaac 45428956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 39948126 - 39947965
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  39948126 atcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacata 39948027  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||    
T  39948026 ttcaaattgtgttcttttgccaccattcaaagccacattatgatttaaacaacataggcaac 39947965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 32955905 - 32956062
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    |||||||||||| |||||||||||||||||   |||||||||||||||||||    
T  32955905 atcatttctatcatttccataacctaaactaactaaataatcaa----attgtcattgaggcattttatcaaacactttgcgtgcaaagtataaaacata 32956000  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  32956001 ttcaaattgtgttcatttgccaccattcaaagccacattataatttaaacaacataggcaac 32956062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 234 - 353
Target Start/End: Complemental strand, 25965308 - 25965189
Alignment:
Q  234 aatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccaccattcaaacccacat 333  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  25965308 aatcaataaaattatcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaacattcaaagccacat 25965209  T
Q  334 tatgatttaaacaacatagg 353  Q
    ||||||||||||||||||||    
T  25965208 tatgatttaaacaacatagg 25965189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 29401160 - 29401291
Alignment:
Q  206 atcatttccataa-ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||| ||||| ||    
T  29401160 atcatatccataagctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 29401259  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||||||||||||||| |||||||||    
T  29401260 tgttcttttgccaccattcaaaaccacattat 29401291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 20938399 - 20938282
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| || ||||||||    
T  20938399 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 20938300  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  20938299 cattcaaaaccacattat 20938282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 45284675 - 45284558
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||| | ||| |||| || ||||||||    
T  45284675 ctaaactaactaaataatcaataaaattgtcattgagccattttatcaaacactttgtgtgcaaagtatcaaacatacttaaaatgtgttcttttgccac 45284576  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  45284575 cattcaaaaccacattat 45284558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 45292038 - 45291921
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||| | ||| |||| || ||||||||    
T  45292038 ctaaactaactaaataatcaataaaattgtcattgagccattttatcaaacactttgtgtgcaaagtatcaaacatacttaaaatgtgttcttttgccac 45291939  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  45291938 cattcaaaaccacattat 45291921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 10828581 - 10828712
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| ||||||| ||||| ||    
T  10828581 atcatatccataacctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtccaaagtatcaaacatactcaaaatg 10828680  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
     | || |||||||| ||||||| |||||||||    
T  10828681 cgttcttttgccacaattcaaaaccacattat 10828712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 25515366 - 25515496
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    |||||||||||||| |||||||||| ||||||||||| |||| |||||||| |||||||||||||||||  |||||||||||| ||||||| |||||| |    
T  25515366 atcatttccataacctaaactaactcaataatcaatataattctcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaatcg 25515465  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    ||||| |||||||||||||||| |||||||||    
T  25515466 tgctc-tttgccaccattcaaaaccacattat 25515496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 36655906 - 36656037
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||| ||||||| ||||| ||    
T  36655906 atcatatccataacctaaactaactaaataatcaataaaatgttcattgagacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 36656005  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||||||||||| ||| |||||||||    
T  36656006 tgttcttttgccaccattgaaaaccacattat 36656037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 3940299 - 3940416
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  3940299 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 3940398  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  3940399 caatcaaaaccacattat 3940416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 5352468 - 5352351
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  5352468 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 5352369  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  5352368 caatcaaaaccacattat 5352351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 276 - 357
Target Start/End: Complemental strand, 7185475 - 7185394
Alignment:
Q  276 tgtgcaaagtataaaacatattcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7185475 tgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 7185394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 15831631 - 15831514
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  15831631 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaagactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 15831532  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  15831531 cattcaaaaccacattat 15831514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 30496517 - 30496634
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  30496517 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 30496616  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  30496617 caatcaaaaccacattat 30496634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 43979023 - 43978906
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  43979023 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 43978924  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  43978923 caatcaaaaccacattat 43978906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 43539308 - 43539425
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| || |  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  43539308 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaaaacattgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 43539407  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| ||| |||||    
T  43539408 caatcaaaaccatattat 43539425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 238 - 313
Target Start/End: Original strand, 45136881 - 45136956
Alignment:
Q  238 aataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcattt 313  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||||||| ||||| |||||||| ||||||    
T  45136881 aataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaatatatttaaattgtgttcattt 45136956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 22686904 - 22686849
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattg 253  Q
    |||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||    
T  22686904 atcatttctaccatttccataactaaactaactaaataatcact-aaattgtcattg 22686849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 28877168 - 28877008
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28877168 atcatttctatcatttccataaccaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttggtgtgcaaagtataaaacatat 28877069  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28877068 tcaaattgtgttcatttgccaccattcaaacccacattatgatttaaacaatataggcaac 28877008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 8580053 - 8580213
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  8580053 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatat 8580152  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  8580153 tcaaattgtgttcatttgccaccattcaaagctacattatgatttaaacaacataggcaac 8580213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 28241347 - 28241507
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  28241347 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcgaacactttgtgtgcaaagtataaaacatat 28241446  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  28241447 tcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaac 28241507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 7757850 - 7757689
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||     
T  7757850 atcatttctatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatg 7757751  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  7757750 ttcaaattgtgttcatttgccaccattcaaaaccacattataatttaaacaacataggcaac 7757689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 206 - 357
Target Start/End: Original strand, 14246 - 14397
Alignment:
Q  206 atcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgt 305  Q
    |||||||| |||  ||||||||||||||||||||||||||| |||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  14246 atcatttctatacataaactaactaaataatcaataaaattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgt 14345  T
Q  306 gctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  14346 gttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 14397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 197 - 358
Target Start/End: Original strand, 8701771 - 8701933
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| |||| |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  8701771 atcatttctatcatttccataacctaaacaaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 8701870  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaact 358  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  8701871 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatatgcaact 8701933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 197 - 354
Target Start/End: Complemental strand, 17658848 - 17658690
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  17658848 atcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtatgcaaagtataaaacata 17658749  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggc 354  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  17658748 ttcaaattgtgttcatttgccaccattcaaaaccacattatgatttaaacaacataggc 17658690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 19228219 - 19228380
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||| |||||||| |||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  19228219 atcatttttatcattttcataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 19228318  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19228319 ttcaaattatgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 19228380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 42537675 - 42537514
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || | |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  42537675 atcatttctatcatttccataacctaaactaactaaataatcaatataaatttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 42537576  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||| || ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  42537575 ttcaaattatgttcatttgccaccattcaaagccacattatgattttaacaacataggcaac 42537514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 42942034 - 42942194
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  42942034 atcatttctatcatttccataacctaaactaactaaa-aatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacata 42942132  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||| || ||||||||||| ||||||| ||| ||||||||||||||| ||||||||||    
T  42942133 ttcaaattatgttcatttgccacaattcaaagccatattatgatttaaacagcataggcaac 42942194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 38968624 - 38968462
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  38968624 atcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 38968525  T
Q  296 ttcaaattgtgctcatttgccaccattca-aacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||| ||  ||||||||||||| |||||||||||||||    
T  38968524 ttcaaattgtgttcatttgccaccattcataagtcacattatgattttaacaacataggcaac 38968462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 512319 - 512480
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||| |||| |||||| |||||||||||||||| ||||| |||| ||||||||  |||| |||||||||||   |||||||||||||||||||    
T  512319 atcatttctataattttcataacctaaactaactaaataagcaatataattttcattgaggtatttgatcaaacactttgggtgcaaagtataaaacata 512418  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  512419 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaac 512480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 19040687 - 19040804
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  19040687 ctaaactaactaaataatcaataaatttgtcattgacacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 19040786  T
Q  319 cattcaaacccacattat 336  Q
    ||||||||||||||||||    
T  19040787 cattcaaacccacattat 19040804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 40624484 - 40624601
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||| ||| || |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||| |||    
T  40624484 ctaaactaactaaataatcaataaaattgttattaaggcattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgtcac 40624583  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  40624584 cattcaaaaccacattat 40624601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 5197490 - 5197359
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||| ||||| ||    
T  5197490 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 5197391  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||||||||||||||| |||||||||    
T  5197390 tgttcttttgccaccattcaaaaccacattat 5197359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 220 - 336
Target Start/End: Original strand, 27673224 - 27673340
Alignment:
Q  220 taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacc 319  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||| ||||||| ||||| |||| || |||||||||    
T  27673224 taaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaaatatcaaacatactcaaaatgtgttcttttgccacc 27673323  T
Q  320 attcaaacccacattat 336  Q
    ||||||| |||||||||    
T  27673324 attcaaaaccacattat 27673340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 30705639 - 30705522
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||| ||||||| | ||| |||| || ||||||||    
T  30705639 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaaatatcaaacatactaaaaatgtgttcttttgccac 30705540  T
Q  319 cattcaaacccacattat 336  Q
    |||| ||| |||||||||    
T  30705539 cattgaaaaccacattat 30705522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 336
Target Start/End: Complemental strand, 20422463 - 20422335
Alignment:
Q  209 atttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgc 307  Q
    ||||||||||| |||||||||||||||||||| | ||||||||||| | |||||||||||||||||  |||| ||||||| ||||||||||||| ||||     
T  20422463 atttccataacctaaactaactaaataatcaaaataattgtcattggggcattttatcaaacactttgtgtgaaaagtatcaaacatattcaaaatgtgt 20422364  T
Q  308 tcatttgccaccattcaaacccacattat 336  Q
    ||||||| ||||||| ||| | |||||||    
T  20422363 tcatttggcaccatttaaaactacattat 20422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 3e-76; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 21022436 - 21022596
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  21022436 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatat 21022535  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21022536 tcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 21022596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 40357828 - 40357988
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40357828 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttggtgtgcaaagtataaaacatat 40357927  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40357928 tcaaactgtgttcatttgccaccattcaaatccacattatgatttaaacaacataggcaac 40357988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 30726289 - 30726449
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  30726289 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatat 30726388  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  30726389 tcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaac 30726449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 1089132 - 1089292
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  1089132 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatat 1089231  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||| ||||| |||||    
T  1089232 tcaaattgtgttcatttgccaccattcaaagccacattattatttaaactacatatgcaac 1089292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 1308662 - 1308822
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  1308662 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcgaacactttgtgtgcaaagtataaaacatat 1308761  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||| ||||| |||||    
T  1308762 tcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacatatgcaac 1308822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 50275260 - 50275099
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||  ||||||||| ||||||||||    
T  50275260 atcatttctatcatttccataacctaaactaactacataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagcataaaacata 50275161  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  50275160 ttcaaattgtgttcatttgccaccattcaaagccacattctgatttaaacaacataggcaac 50275099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 37021630 - 37021791
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||  |||||||||||||||| |||    
T  37021630 atcatttctatcattttcataacctaaactaactaaataatcaataaaattgtcattgaagcattttatcaaacactttgtgtgcaaagtataaaagata 37021729  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  37021730 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatatgcaac 37021791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 51683728 - 51683567
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  51683728 atcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 51683629  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  51683628 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaac 51683567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 48256118 - 48256279
Alignment:
Q  197 atcatttctatcatttccataact-aaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  48256118 atcatttctatcatttccataacttaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 48256217  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  48256218 ttcaaattgttttcatttgccaccattcaaagccacattatgatttaaactacataggcaac 48256279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 50902005 - 50901845
Alignment:
Q  197 atcatttctatcatttccataact-aaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||| |||||||||||    
T  50902005 atcatttctatcatttccataacttaaactaactaaa-aatcaataaaattgtcattgaaacattttatcaaacactttgtgtgcaaaatataaaacata 50901907  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||  ||||||||||| ||||||||||| ||||||||||||| ||||    
T  50901906 ttcaaattgtgttcatttaacaccattcaaagccacattatgaattaaacaacatagacaac 50901845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 55407334 - 55407495
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| ||| |||| ||||  |||||||| ||  ||||||||||||||||||||    
T  55407334 atcatttctatcatttccataacctaaactaactaaataatcaatataattttcaatgaggcattcgatcaaacattttgtgtgcaaagtataaaacata 55407433  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  55407434 ttcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaac 55407495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 219 - 357
Target Start/End: Complemental strand, 68094 - 67956
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    ||||||||||||||||||||||| |||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||    
T  68094 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttatgtgcaaagtataaaacatattcaaattgtgttcatttgctac 67995  T
Q  319 cattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||| ||||||||| ||||||||||||||||||||    
T  67994 cattcaaagccacattatcatttaaacaacataggcaac 67956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 219 - 357
Target Start/End: Complemental strand, 46436747 - 46436609
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  46436747 ctaaactaactaaataatcaataaaattgccattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 46436648  T
Q  319 cattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||| | ||||| ||| ||||||||| |||| |||||    
T  46436647 cattcagaaccacaatatcatttaaacagcataagcaac 46436609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 222 - 336
Target Start/End: Original strand, 41798568 - 41798682
Alignment:
Q  222 aactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccaccat 321  Q
    |||||||||||||||||||||| ||||| |||| ||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||    
T  41798568 aactaactaaataatcaataaatttgtcgttgacacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgctaccat 41798667  T
Q  322 tcaaacccacattat 336  Q
    |||||||||||||||    
T  41798668 tcaaacccacattat 41798682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 50023099 - 50023230
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||| ||||| ||    
T  50023099 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 50023198  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||||||||||||||| |||||||||    
T  50023199 tgttcttttgccaccattcaaaaccacattat 50023230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 9892838 - 9892955
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| || ||||||||    
T  9892838 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 9892937  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  9892938 cattcaaaaccacattat 9892955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 11050079 - 11050210
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||||  |||||||||||| ||||  |||||||||||| ||||||||||||||||    
T  11050079 atcatttccataacctaaactaactaaataatcaatataattttcattgatgcattttatcaaatactttgtgtgcaaagtatcaaacatattcaaattg 11050178  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || ||||||| ||||||||||| |||||||||    
T  11050179 tgttcatttggcaccattcaaaaccacattat 11050210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 21538008 - 21538139
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||||| |||||||||||||||||  |||||||||||| ||||| ||||||||||    
T  21538008 atcatttccataacctaaactaactaaataatcaatataattatcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacagattcaaattg 21538107  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || ||||||| || |||||||| |||||||||    
T  21538108 tgttcatttggcatcattcaaaaccacattat 21538139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 50030217 - 50030348
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||||||||  |||||||||||||||||  |||||||||||| ||||||| ||||| ||    
T  50030217 atcatatccataacctaaactaactaaataatcagtaaaattgtcattgatgcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 50030316  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||||||||||||||| |||||||||    
T  50030317 tgttcttttgccaccattcaaaaccacattat 50030348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 6181360 - 6181477
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  6181360 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 6181459  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  6181460 caatcaaaaccacattat 6181477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 49090923 - 49090806
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  49090923 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 49090824  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  49090823 caatcaaaaccacattat 49090806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 49165536 - 49165419
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||| ||||||| ||||| |||| |  ||||||||    
T  49165536 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaactatcaaacatactcaaaatgtgttattttgccac 49165437  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  49165436 cattcaaaaccacattat 49165419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 10752983 - 10753114
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    |||||||| ||||| |||||||| ||||||||||||| |||| |||||||| |||||||||||||||||  |||||||||||||||||||||| |||  |    
T  10752983 atcatttcaataacctaaactaattaaataatcaatataattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatatttaaagag 10753082  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    ||  |||||||||||||||||| |||||||||    
T  10753083 tgtccatttgccaccattcaaaaccacattat 10753114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 10966752 - 10966883
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    |||||||| ||||| |||||||| ||||||||||||| |||| |||||||| |||||||||||||||||  |||||||||||||||||||||| |||  |    
T  10966752 atcatttcaataacctaaactaattaaataatcaatataattatcattgaggcattttatcaaacactttgtgtgcaaagtataaaacatatttaaagag 10966851  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    ||  |||||||||||||||||| |||||||||    
T  10966852 tgtccatttgccaccattcaaaaccacattat 10966883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 50193982 - 50193864
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtg-ctcatttgcca 317  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||| ||||  |  |||||||    
T  50193982 ctaaactaagtaaataatcaataaaattgtcattgagacattttatcaaacactttatgtgcaaagtatcaaacatactcaaaatgtgttttttttgcca 50193883  T
Q  318 ccattcaaacccacattat 336  Q
    | ||||||| |||||||||    
T  50193882 ctattcaaaaccacattat 50193864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 219 - 326
Target Start/End: Complemental strand, 30704526 - 30704419
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||| ||||||| | ||| |||| || ||| ||||    
T  30704526 ctaaactaactaaataatcaataaaattgtcattgagatattttatcaaacactttgtgtgcaaagtatcaaacatactaaaaatgtgttcttttcccac 30704427  T
Q  319 cattcaaa 326  Q
    ||||||||    
T  30704426 cattcaaa 30704419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 197 - 334
Target Start/End: Complemental strand, 14315910 - 14315772
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||| |||| |||||  | |||||| ||||||||||   |||||||||||||||||||    
T  14315910 atcatttcaatcatttccataacctaaactaactcaataatcaatacaattttcatttgggcattttgtcaaacactttgcgtgcaaagtataaaacata 14315811  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacatt 334  Q
     ||||| |||| ||||||| ||||||||||| |||||||    
T  14315810 ctcaaaatgtgttcatttggcaccattcaaaaccacatt 14315772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 31422201 - 31422083
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacatttta-tcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgcca 317  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||  |||||||||||| ||||||| ||||| |||| |  |||||||    
T  31422201 ctaaactaactaaataatcaataaaattgtcattgacacattttattcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgcca 31422102  T
Q  318 ccattcaaacccacattat 336  Q
    ||| ||||| |||||||||    
T  31422101 ccaatcaaaaccacattat 31422083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 44679645 - 44679762
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||  |||||||| ||| ||||||| ||||| |||| || ||||||||    
T  44679645 ctaaactaactaaataatcaatgaaatggtcattgaaacattttatcaaacactttgtgtgcaaaatatcaaacatactcaaaatgtgttcttttgccac 44679744  T
Q  319 cattcaaacccacattat 336  Q
    ||||||||  ||||||||    
T  44679745 cattcaaaatcacattat 44679762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 221 - 336
Target Start/End: Complemental strand, 3184457 - 3184342
Alignment:
Q  221 aaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacca 320  Q
    |||||||||||||||  |||||||||||||||||| |||||| ||||||||||   ||||||||||| ||||||| ||||| |||| || ||||||||||    
T  3184457 aaactaactaaataaaaaataaaattgtcattgaggcattttctcaaacactttgggtgcaaagtatcaaacatactcaaaatgtgatcttttgccacca 3184358  T
Q  321 ttcaaacccacattat 336  Q
    |||||| |||||||||    
T  3184357 ttcaaaaccacattat 3184342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 221 - 336
Target Start/End: Original strand, 3185456 - 3185571
Alignment:
Q  221 aaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacca 320  Q
    |||||||||||||||  |||||||||||||||||| |||||| ||||||||||   ||||||||||| ||||||| ||||| |||| || ||||||||||    
T  3185456 aaactaactaaataaaaaataaaattgtcattgaggcattttctcaaacactttgggtgcaaagtatcaaacatactcaaaatgtgatcttttgccacca 3185555  T
Q  321 ttcaaacccacattat 336  Q
    |||||| |||||||||    
T  3185556 ttcaaaaccacattat 3185571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 221 - 336
Target Start/End: Original strand, 3185664 - 3185779
Alignment:
Q  221 aaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacca 320  Q
    |||||||||||||||  |||||||||||||||||| |||||| ||||||||||   ||||||||||| ||||||| ||||| |||| || ||||||||||    
T  3185664 aaactaactaaataaaaaataaaattgtcattgaggcattttctcaaacactttgggtgcaaagtatcaaacatactcaaaatgtgatcttttgccacca 3185763  T
Q  321 ttcaaacccacattat 336  Q
    |||||| |||||||||    
T  3185764 ttcaaaaccacattat 3185779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 200 - 334
Target Start/End: Complemental strand, 14297658 - 14297523
Alignment:
Q  200 atttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattc 298  Q
    ||||| |||||||||||||| |||||||||| ||||||||||| |||| |||||  | |||||| ||||||||||   ||||||||||||||||||| ||    
T  14297658 atttcaatcatttccataacctaaactaactcaataatcaatacaattttcatttgggcattttgtcaaacactttgcgtgcaaagtataaaacatactc 14297559  T
Q  299 aaattgtgctcatttgccaccattcaaacccacatt 334  Q
    ||| |||| ||||||| ||||||||||| |||||||    
T  14297558 aaaatgtgttcatttggcaccattcaaaaccacatt 14297523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 206 - 334
Target Start/End: Original strand, 41933179 - 41933308
Alignment:
Q  206 atcatttccataa-ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||||||||||| ||||||||||| ||||||||||| |||| |||||| | | |||||||||||||||  |||||||||||| ||||||||||||||      
T  41933179 atcatttccataatctaaactaactcaataatcaatataattttcattggggctttttatcaaacactttgtgtgcaaagtatcaaacatattcaaataa 41933278  T
Q  305 tgctcatttgccaccattcaaacccacatt 334  Q
    |  ||||||| ||||||||||| |||||||    
T  41933279 tcttcatttgacaccattcaaaaccacatt 41933308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 206 - 334
Target Start/End: Original strand, 11083562 - 11083691
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||||| |||||| |||||||||| |||||||| || |||| |||||  | |||||| ||||||||||  ||||||||| || ||||||| ||||| ||    
T  11083562 atcattttcataacctaaactaactcaataatcagtacaattttcatttgggcattttgtcaaacactttgtgtgcaaagcatcaaacatactcaaaatg 11083661  T
Q  305 tgctcatttgccaccattcaaacccacatt 334  Q
    || ||||||| ||||||||||| |||||||    
T  11083662 tgttcatttgacaccattcaaaaccacatt 11083691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 326
Target Start/End: Original strand, 4719949 - 4720055
Alignment:
Q  220 taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacc 319  Q
    |||||||| ||||||||||||  |||| |||||  | |||||| ||||||||||  |||||||||||| ||||||||||  |||||| | ||||| ||||    
T  4719949 taaactaagtaaataatcaatgcaattttcatttgggcattttgtcaaacactttgtgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 4720048  T
Q  320 attcaaa 326  Q
    |||||||    
T  4720049 attcaaa 4720055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 2e-74; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 200 - 357
Target Start/End: Original strand, 15036279 - 15036436
Alignment:
Q  200 atttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattca 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  15036279 atttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattca 15036378  T
Q  300 aattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15036379 aattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 15036436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 39602241 - 39602080
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  39602241 atcatttctatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacata 39602142  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39602141 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 39602080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 42485086 - 42485246
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  42485086 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcgaacactttgtgtgcaaagtataaaacatat 42485185  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  42485186 tcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaac 42485246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 39846533 - 39846694
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||  ||| ||||||||||||||||    
T  39846533 atcatttctatcatttccataacctaaactaactaaataatcaataaaattgtcatggagacagtttatcaaacactttgtgtacaaagtataaaacata 39846632  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39846633 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 39846694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 489177 - 489337
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  489177 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcgaacactttgtgtgcaaagtataaaacatat 489276  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    | |||||||| |||||||| |||||||||| ||||||||| |||||||| |||||||||||    
T  489277 ttaaattgtgttcatttgcaaccattcaaagccacattataatttaaactacataggcaac 489337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 39938763 - 39938924
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||    
T  39938763 atcatttctatcatttccataacctaaactaactacataatcaataaaattgtcattgagacattttatcaaatactttgtgtgcaaagtataaaactta 39938862  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||    
T  39938863 ttcaaattgtgttcatttgccaccattcaaagccccattatgatttaaacaacataggcaac 39938924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 43212031 - 43211870
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  43212031 atcatttatatcatttccttaacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacata 43211932  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  43211931 ttcaaattgtgttcatttcccaccattcaaagccacattatgatttaaacaacataggcaac 43211870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 206 - 357
Target Start/End: Complemental strand, 39252528 - 39252376
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  39252528 atcatttccataacctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattg 39252429  T
Q  305 tgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |  ||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  39252428 tattcatttgccaccattcaaagccacattatgatttaaacaacatatgcaac 39252376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 5303768 - 5303929
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  5303768 atcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 5303867  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  5303868 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaac 5303929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 43188575 - 43188414
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||  | ||||||||||||||||||    
T  43188575 atcatttatatcatttccataacataaactaactaaataatcaataaaattgtcattgaaacattttatcaaacactttgtatgcaaagtataaaacata 43188476  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  43188475 ttcaaatcgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaac 43188414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 219 - 357
Target Start/End: Original strand, 40076820 - 40076958
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    ||||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  |||||||| |||||||||||||||||||||| |||||||||||    
T  40076820 ctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaattataaaacatattcaaattgtgttcatttgccac 40076919  T
Q  319 cattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  40076920 cattcaaagccacattatgatttaaacaacataggcaac 40076958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 45064756 - 45064606
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||          | ||    
T  45064756 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaa----------aaat 45064667  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  45064666 tcaaattgtgttcatttgccaccattcaaagccacattaagatttaaacaacataggcaac 45064606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 219 - 342
Target Start/End: Complemental strand, 37327286 - 37327163
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  37327286 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccac 37327187  T
Q  319 cattcaaacccacattatgattta 342  Q
    ||||||||  |||||||| |||||    
T  37327186 cattcaaaatcacattatcattta 37327163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 34822564 - 34822725
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  |||||| |||||||||||||    
T  34822564 atcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcagagtataaaacata 34822663  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    || |||||||| ||||||||   |||||||| |||||||||||||||| |||||||||||||    
T  34822664 tttaaattgtgttcatttgcagtcattcaaagccacattatgatttaaccaacataggcaac 34822725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 35552182 - 35552051
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||| ||||| ||    
T  35552182 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 35552083  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||||||||||||||| |||||||||    
T  35552082 tgttcttttgccaccattcaaaaccacattat 35552051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 24249999 - 24249868
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    |||||||||||||| |||||| ||||||||||||||| |||| |||||| | |||||||||||| |||| ||||||||||||| ||||||||||||| ||    
T  24249999 atcatttccataacctaaactgactaaataatcaatataattctcattggggcattttatcaaatactttatgtgcaaagtatcaaacatattcaaaatg 24249900  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    |||||||||| ||||||||||| |||||||||    
T  24249899 tgctcatttgacaccattcaaaaccacattat 24249868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 2984648 - 2984508
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    |||||||  |||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||||||||||||||  |||||||||||| |||| ||    
T  2984648 atcattttcatcatttccataacctaaactaactaaataatcaatataattgtcgttgaggcattttatcaaacactttgtgtgcaaagtatgaaactta 2984549  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattat 336  Q
    ||||||||||| | ||||| || |||||||| |||||||||    
T  2984548 ttcaaattgtgtttatttggcatcattcaaaaccacattat 2984508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 41249636 - 41249781
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| | ||                |||||||||||||||| ||||    
T  41249636 atcatttctatcatttccataacctaaactaactacataatcaataaaattgtcattgcggca----------------atgtgcaaagtataaagcata 41249719  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  41249720 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 41249781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 20857802 - 20857671
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||| ||||||| ||||| ||    
T  20857802 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacaatttgtgtgcaaagtatcaaacatactcaaaatg 20857703  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || ||||| |||||||||| |||||||||    
T  20857702 tgttcttttgcaaccattcaaaaccacattat 20857671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 25097 - 25214
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  25097 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 25196  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  25197 caatcaaaaccacattat 25214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 1053027 - 1052910
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  1053027 ctaaactaactaaataatcaataaaattgtcattgatacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 1052928  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  1052927 caatcaaaaccacattat 1052910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 23021891 - 23022008
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  23021891 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 23021990  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  23021991 caatcaaaaccacattat 23022008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 26659949 - 26659832
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  26659949 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 26659850  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  26659849 caatcaaaaccacattat 26659832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 34371450 - 34371551
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| ||    
T  34371450 atcatatccataacctaaactaactaaataatcaaaaaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 34371549  T
Q  305 tg 306  Q
    ||    
T  34371550 tg 34371551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 211 - 336
Target Start/End: Complemental strand, 45128261 - 45128135
Alignment:
Q  211 ttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctc 309  Q
    ||||||||| |||||||||| ||||||||||| ||||  ||||| | |||||||||||||||||  |||||||||||| ||||||| |||||  ||| ||    
T  45128261 ttccataacctaaactaactcaataatcaatacaattcacattggggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaacgtgttc 45128162  T
Q  310 atttgccaccattcaaacccacattat 336  Q
     |||||||||||||||| |||||||||    
T  45128161 ttttgccaccattcaaaaccacattat 45128135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 5677587 - 5677456
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    |||||||||||||| |||||| |||  |||||||||| |||| |||||| | |||||||||||||||||  ||||||||  || ||||||| ||||| ||    
T  5677587 atcatttccataacctaaacttactcgataatcaatataattttcattggggcattttatcaaacactttctgtgcaaaacatcaaacatactcaaaatg 5677488  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    |  || ||||| |||||||||| |||||||||    
T  5677487 tattcttttgctaccattcaaaaccacattat 5677456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 25864609 - 25864648
Alignment:
Q  318 ccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  25864609 ccattcaaagccacattatgatttaaacaacataggcaac 25864648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 334
Target Start/End: Complemental strand, 22495419 - 22495305
Alignment:
Q  220 taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacc 319  Q
    |||||||| ||||||||||||  |||| |||||  | |||||||||||| |     |||||||||||| ||||||||||  |||||| | ||||| ||||    
T  22495419 taaactaagtaaataatcaatgcaattttcatttgggcattttatcaaaaaacatttgtgcaaagtatcaaacatattctcattgtgttaatttgacacc 22495320  T
Q  320 attcaaacccacatt 334  Q
    ||||||| |||||||    
T  22495319 attcaaaaccacatt 22495305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 8e-74; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 15073776 - 15073936
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  15073776 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatat 15073875  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  15073876 tcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaac 15073936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 42507575 - 42507735
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  42507575 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatat 42507674  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  42507675 tcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaac 42507735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 10517506 - 10517345
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  10517506 atcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacata 10517407  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10517406 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 10517345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 17835602 - 17835441
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  17835602 atcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacata 17835503  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17835502 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 17835441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 47776860 - 47776699
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  47776860 atcatttctatcatttccataacctaaactaactaaataatcaataaatttgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacata 47776761  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  47776760 ttcaaattgtgttcatttgtcaccattcaaagccacattatgatttaaacaacataggcaac 47776699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 197 - 353
Target Start/End: Original strand, 27453166 - 27453323
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||    
T  27453166 atcatttctatcatttccataacctaaactgactaaataatcaataaaattgtcaatgagacattttatcaaacactttgtgtgcaaagtataaaacata 27453265  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacatagg 353  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  27453266 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagg 27453323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 39461054 - 39460893
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    |||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  39461054 atcatttctaccatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacata 39460955  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  39460954 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaaaataggcaac 39460893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 47672632 - 47672793
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  47672632 atcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 47672731  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47672732 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 47672793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 199 - 357
Target Start/End: Complemental strand, 37340828 - 37340669
Alignment:
Q  199 catttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatatt 297  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  ||||||||||||||||||||||    
T  37340828 catttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacatatt 37340729  T
Q  298 caaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37340728 caaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 37340669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 197 - 353
Target Start/End: Complemental strand, 34738892 - 34738735
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||  || |||||| ||||||||||    
T  34738892 atcatttctatcatttccataacctaaactaactacataatcaataaaattgtcatcgagacattttatcaaacactttgtgagcaaagcataaaacata 34738793  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacatagg 353  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  34738792 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagg 34738735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 9494343 - 9494503
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| |||| |||||||  ||||| |||||||||||  ||||||||||||||||||||    
T  9494343 atcatttctatcatt-ccataacctaaactaactaaataatcaatataattttcattgacgcatttgatcaaacactttgtgtgcaaagtataaaacata 9494441  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  9494442 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 9494503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 36978124 - 36977963
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  36978124 atcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 36978025  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||| || |||||| ||||||||||||  |||||||||||||||||||||||||||||    
T  36978024 ttcaaattatgttcatttaccaccattcaaagtcacattatgatttaaacaacataggcaac 36977963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 14689605 - 14689766
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  | |||||||||||||| |||    
T  14689605 atcatttttatcatttccataacataaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtatgcaaagtataaaagata 14689704  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| | ||||||||| ||||||| | ||||||| ||||||||||||||| ||||    
T  14689705 ttcaaattgtgtttatttgccactattcaaagctacattatcatttaaacaacatagacaac 14689766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 41880993 - 41880876
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  41880993 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 41880894  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  41880893 cattcaaaaccacattat 41880876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 35609986 - 35610103
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  35609986 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 35610085  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  35610086 caatcaaaaccacattat 35610103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 48403860 - 48403743
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  48403860 ctaaactaactaaataatcaataaaattatcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 48403761  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  48403760 cattcaaaaccacattat 48403743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 220 - 336
Target Start/End: Original strand, 556217 - 556333
Alignment:
Q  220 taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacc 319  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||  | |||||||||| ||||||| ||||| | || ||||||||||||    
T  556217 taaactaactaaataataaataaaattgtcattgaggcattttatcaaacactttgtatgcaaagtatcaaacatactcaaaatatgttcatttgccacc 556316  T
Q  320 attcaaacccacattat 336  Q
    ||||||| |||||||||    
T  556317 attcaaaaccacattat 556333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 5541096 - 5541227
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||| ||||||| ||||| |     
T  5541096 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacaatttgtgtgcaaagtatcaaacatactcaaaata 5541195  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||||||||||||||| |||| ||||    
T  5541196 tgatcttttgccaccattcaaaaccacgttat 5541227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 45257490 - 45257374
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||| ||||    
T  45257490 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtg-ttttttaccac 45257392  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  45257391 cattcaaaaccacattat 45257374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 46740117 - 46740234
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||| |||||  |||||||||||| ||||||| ||||| |||| || ||||||||    
T  46740117 ctaaactaattaaataatcaataaaattgtcattgacacattttatcaatcactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 46740216  T
Q  319 cattcaaacccacattat 336  Q
    ||||||||  ||||||||    
T  46740217 cattcaaaatcacattat 46740234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 322
Target Start/End: Complemental strand, 16675303 - 16675186
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||| ||||| ||    
T  16675303 atcatatccataacctaaactaacaaaataatcaataaaattgtcattgagacattttattaaacactttgtgtgcaaagtatcaaacatactcaaaatg 16675204  T
Q  305 tgctcatttgccaccatt 322  Q
    |  || ||||||||||||    
T  16675203 tattcttttgccaccatt 16675186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 322
Target Start/End: Complemental strand, 17649671 - 17649554
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||| ||||| ||    
T  17649671 atcatatccataacctaaactaacaaaataatcaataaaattgtcattgagacattttattaaacactttgtgtgcaaagtatcaaacatactcaaaatg 17649572  T
Q  305 tgctcatttgccaccatt 322  Q
    |  || ||||||||||||    
T  17649571 tattcttttgccaccatt 17649554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 220 - 336
Target Start/End: Original strand, 17741019 - 17741135
Alignment:
Q  220 taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacc 319  Q
    |||||||||||||||||||||| |||| |||||  |  ||||||||||||||||  |||||||||||| |||||||||||||||||| |||| || ||||    
T  17741019 taaactaactaaataatcaatataattctcatttgggaattttatcaaacactttgtgtgcaaagtatcaaacatattcaaattgtgttcatatggcacc 17741118  T
Q  320 attcaaacccacattat 336  Q
    ||||||| |||||||||    
T  17741119 attcaaaaccacattat 17741135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 9370960 - 9371073
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||    |||| ||||| |||| |  ||||||||    
T  9370960 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtat----catactcaaaatgtgttattttgccac 9371055  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  9371056 caatcaaaaccacattat 9371073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 17465328 - 17465408
Alignment:
Q  256 acattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccaccattcaaacccacattat 336  Q
    ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  |||||||||||||||| |||||||||    
T  17465328 acattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccaccattcaaaaccacattat 17465408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 17587886 - 17587806
Alignment:
Q  256 acattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccaccattcaaacccacattat 336  Q
    ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  |||||||||||||||| |||||||||    
T  17587886 acattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccaccattcaaaaccacattat 17587806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 17462864 - 17462899
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattga 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  17462864 ctaaactaactaaataatcaataaaattgtcattga 17462899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 254
Target Start/End: Complemental strand, 17590350 - 17590315
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattga 254  Q
    ||||||||||||||||||||||||||||||||||||    
T  17590350 ctaaactaactaaataatcaataaaattgtcattga 17590315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 133; Significance: 4e-69; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 19925267 - 19925107
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  19925267 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcgaacactttgtgtgcaaagtataaaacatat 19925168  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  19925167 tcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaac 19925107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 30890586 - 30890426
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||    
T  30890586 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcgaacactttgtgtgcaaagtataaaacatat 30890487  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||| |||||||||||    
T  30890486 tcaaattgtgttcatttgccaccattcaaagccacattataatttaaactacataggcaac 30890426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 31783275 - 31783436
Alignment:
Q  197 atcatttctatcatttccataa-ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  31783275 atcatttatatcatttccataatctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacata 31783374  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  31783375 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaagaacataggcaac 31783436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 35258420 - 35258581
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  35258420 atcatttctatcatttctataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 35258519  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35258520 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 35258581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 224 - 357
Target Start/End: Complemental strand, 47502813 - 47502680
Alignment:
Q  224 ctaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccaccattc 323  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  47502813 ctaactaaataatcaataaaattgtcattgaggcattttaccaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattc 47502714  T
Q  324 aaacccacattatgatttaaacaacataggcaac 357  Q
    ||| ||||||||||||||||||||||||||||||    
T  47502713 aaagccacattatgatttaaacaacataggcaac 47502680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 45825403 - 45825241
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaa-gtataaaacat 294  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||| |||| |||||||| ||||| |||||||||||  |||||||| |||||||||||    
T  45825403 atcatttctatcatttccataacctaaattaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaaagtataaaacat 45825304  T
Q  295 attcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  45825303 attcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaac 45825241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 19527090 - 19527251
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    |||||||||||||||| |||||| |||| |||||| ||||||||||||||||| |||||| |||||||||||||||||  ||||||||  ||||||||||    
T  19527090 atcatttctatcattttcataacctaaattaactacataatcaataaaattgttattgaggcattttatcaaacactttgtgtgcaaaacataaaacata 19527189  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19527190 ttcaaattgtgtccatttgccaccattcaaagccacattatgatttaaacaacataggcaac 19527251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 51321240 - 51321079
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  |||||||| |||||||||||    
T  51321240 atcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaaatataaaacata 51321141  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||| |||||||  ||||||||||||||||||| |||||||||    
T  51321140 ttcaaattgtgttcatttgccactattcaaagtcacattatgatttaaacaatataggcaac 51321079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 52802657 - 52802496
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||    
T  52802657 atcatttctatcatttccatagcctaaactaactaaacaatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaagata 52802558  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| |  ||||||||||||||||  |||||||||| |||||||||||| |||||    
T  52802557 ttcaaattgtgttattttgccaccattcaaaatcacattatgacttaaacaacataagcaac 52802496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 23275650 - 23275812
Alignment:
Q  197 atcatttctatcatttccataact-aaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  23275650 atcatttctatcatttccataacttaaactgactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 23275749  T
Q  296 ttcaaattgtgctcatttgcca-ccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||| || |||||||||  |||||||||||||||||||||||||||||    
T  23275750 ttcaaattgtgttcatttgtcacccattcaaagtcacattatgatttaaacaacataggcaac 23275812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 49857493 - 49857651
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |   |||| ||||| |||||||||||  ||||||||||||||||||||    
T  49857493 atcatttctatcatttccataacctaaactaactaaataatcaatataatttt---tgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 49857589  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||| | ||||||||||||||||||||    
T  49857590 ttcaaattgtgttcatttgccaccattcaaagccacattctcatttaaacaacataggcaac 49857651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 47656386 - 47656256
Alignment:
Q  206 atcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgt 305  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||| |||    
T  47656386 atcatatccataaccaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgt 47656287  T
Q  306 gctcatttgccaccattcaaacccacattat 336  Q
    | || ||||||||||||||||  ||||||||    
T  47656286 gttcttttgccaccattcaaaatcacattat 47656256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 21141544 - 21141413
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||| ||||| ||    
T  21141544 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 21141445  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||||||||||||||| |||||||||    
T  21141444 tgatcttttgccaccattcaaaaccacattat 21141413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 2365739 - 2365622
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| || ||||||||    
T  2365739 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 2365640  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  2365639 cattcaaaaccacattat 2365622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 19156518 - 19156401
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| || ||||||||    
T  19156518 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 19156419  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  19156418 cattcaaaaccacattat 19156401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 50343525 - 50343656
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||| ||||| ||    
T  50343525 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 50343624  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||||||||||||||| ||| |||||    
T  50343625 tgttcttttgccaccattcaaaaccatattat 50343656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 3731951 - 3732068
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  3731951 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 3732050  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  3732051 caatcaaaaccacattat 3732068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 13639593 - 13639710
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  13639593 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 13639692  T
Q  319 cattcaaacccacattat 336  Q
     ||||||| |||||||||    
T  13639693 aattcaaaaccacattat 13639710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 26876160 - 26876043
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  26876160 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 26876061  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  26876060 caatcaaaaccacattat 26876043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 97504 - 97635
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||| |||||||||| |||||||| |||||| ||||||||||  ||| |||||||| ||||||| ||||| ||    
T  97504 atcatatccataacctaaactaactaaataaacaataaaattatcattgaggcattttctcaaacactttgtgtacaaagtatcaaacatactcaaaatg 97603  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||||||||||||||| |||||||||    
T  97604 tgatcttttgccaccattcaaaaccacattat 97635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 22524636 - 22524521
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||  ||||||||| || | ||||| | |    
T  22524636 ctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaac--attcaaattatgtttatttggctc 22524539  T
Q  319 cattcaaacccacattat 336  Q
    ||||| || |||||||||    
T  22524538 cattccaaaccacattat 22524521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 2424924 - 2425053
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||| |||||||||||||||||||| |||||| |||||||||||||||||  |||||||||||||||||  ||||||||||    
T  2424924 atcatatccataacctaaactaaataaataatcaataaaattgttattgaggcattttatcaaacactttgtgtgcaaagtataaaac--attcaaattg 2425021  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || | ||||| | |||||| || |||||||||    
T  2425022 tgtttatttggctccattccaaaccacattat 2425053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 220 - 336
Target Start/End: Original strand, 17514267 - 17514383
Alignment:
Q  220 taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacc 319  Q
    |||| ||||||||||||||||| |||| | |||  | |||||||||||||||||  ||||||||| || |||||||||||||||||| ||||||| ||||    
T  17514267 taaattaactaaataatcaatataatttttatttgggcattttatcaaacactttgtgtgcaaagaatcaaacatattcaaattgtgttcatttggcacc 17514366  T
Q  320 attcaaacccacattat 336  Q
    ||||||| |||||||||    
T  17514367 attcaaaaccacattat 17514383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 38127052 - 38127128
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  |||||||||||| |||||||    
T  38127052 ctaaactaactaagtaatcaataaaattttcattgagacattttatcaaacactttgtgtgcaaagtatcaaacata 38127128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 336
Target Start/End: Complemental strand, 8474259 - 8474171
Alignment:
Q  248 tcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccaccattcaaacccacattat 336  Q
    ||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  |||||||||| ||||| |||||||||    
T  8474259 tcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccaccaatcaaaaccacattat 8474171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 3e-67; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 205 - 357
Target Start/End: Original strand, 4007878 - 4008031
Alignment:
Q  205 tatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaatt 303  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  4007878 tatcatttccataacctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaatt 4007977  T
Q  304 gtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4007978 gtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 4008031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 205 - 357
Target Start/End: Complemental strand, 3976224 - 3976071
Alignment:
Q  205 tatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaatt 303  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  3976224 tatcatttccataacctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaatt 3976125  T
Q  304 gtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  3976124 gtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaac 3976071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 42165688 - 42165527
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||| |||    
T  42165688 atcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaatata 42165589  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42165588 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 42165527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 47073754 - 47073915
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||| |||    
T  47073754 atcatttctatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaatata 47073853  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  47073854 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaatataggcaac 47073915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 44230239 - 44230078
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||| |  ||||||||||||||||||||    
T  44230239 atcatttctatcatttccataacctaaaccaactaaataatcaataaaattgtcattgaggcattttatcaaacacattgtgtgcaaagtataaaacata 44230140  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| |||||||||||| |||||| |||||||||| |||||||||||||||||||    
T  44230139 ttcaaattgtgttcatttgccaccgttcaaagccacattatgttttaaacaacataggcaac 44230078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 50216425 - 50216586
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||  |||||||||||||||||  ||||||||| ||||||||||    
T  50216425 atcatttctatcatttccataacctaaactaaccacataatcaataaaattgtcattgaagcattttatcaaacactttgtgtgcaaagcataaaacata 50216524  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  50216525 ttcaaattgtgttcatttgccaccattcaaaaccacattatgatttaaacaacataggcaac 50216586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 20917564 - 20917725
Alignment:
Q  197 atcatttctatcatttccataact-aaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  20917564 atcatttcaatcatttccataacttaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 20917663  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  20917664 ttcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaac 20917725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 20926526 - 20926687
Alignment:
Q  197 atcatttctatcatttccataact-aaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  20926526 atcatttcaatcatttccataacttaaactaactaaataatcaatataattttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 20926625  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  20926626 ttcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaac 20926687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 50963480 - 50963319
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||| ||||||||||||||| |||||||||||||||||  |||||||||||| |||| |||||||||||||||||  |||| |||||||||||||||    
T  50963480 atcatttatatcatttccataacctaaactaactaaataatttataaaattgtcactgaggcattttatcaaacactttgtgtgtaaagtataaaacata 50963381  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  50963380 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 50963319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 234 - 357
Target Start/End: Original strand, 3501477 - 3501600
Alignment:
Q  234 aatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccaccattcaaacccacat 333  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3501477 aatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaacccacat 3501576  T
Q  334 tatgatttaaacaacataggcaac 357  Q
    ||||||||||||||||||||||||    
T  3501577 tatgatttaaacaacataggcaac 3501600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 30255549 - 30255710
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    |||||||||||||||||| |||| | |||||||||||||||||||| || | |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  30255549 atcatttctatcatttccttaacctgaactaactaaataatcaatataaatttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 30255648  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30255649 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaac 30255710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 42805809 - 42805970
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||| ||  ||||||||||||||||||||    
T  42805809 atcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacattttgtgtgcaaagtataaaacata 42805908  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| ||||    
T  42805909 ttcaaattgtgttcatttgccaccattcaaagccacattatcatttaaacaacatagacaac 42805970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 49195994 - 49196155
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    |||||||||||||||| |||||| |||||||||||||||||||||| |||| |||||||  ||||| |||||||||||  ||||||||||||||||||||    
T  49195994 atcatttctatcattttcataacctaaactaactaaataatcaatataattttcattgaagcatttgatcaaacactttgtgtgcaaagtataaaacata 49196093  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  49196094 ttcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaac 49196155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 42756677 - 42756518
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  || |||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  42756677 atcatttctatcatttccataacctaaactaactaaataatcaataa--ttttcattgaggcatttgatcaaacactttgtgtgcaaagtataaaacata 42756580  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||| ||||    
T  42756579 ttcaaattgtgttcatttgccaccattcaaagcgacattatgatttaaacaacatagacaac 42756518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 197 - 348
Target Start/End: Complemental strand, 48563453 - 48563301
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| |||||||| ||  ||||||||||||||||||||    
T  48563453 atcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacattttgtgtgcaaagtataaaacata 48563354  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaac 348  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||||||||    
T  48563353 ttcaaattgtgttcatttgccaccattcaaagacacattatgatttaaacaac 48563301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 219 - 357
Target Start/End: Complemental strand, 597261 - 597123
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||| |||| || ||||||||    
T  597261 ctaagctaactaaataatcaataaaattgtcattgagacattttatcaaacactttgtgtgcaaagtatcaaacataatcaaaatgtgttcttttgccac 597162  T
Q  319 cattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  597161 cattcaaagccacattatgatttaaacaacatgggcaac 597123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 206 - 357
Target Start/End: Complemental strand, 48889260 - 48889108
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    |||||||||||||| |||||||||||||||||||||| |||| |||||||| | ||| |||||||||||  ||||||||||||||||||||||||||||     
T  48889260 atcatttccataacctaaactaactaaataatcaatataattttcattgaggcctttgatcaaacactttgtgtgcaaagtataaaacatattcaaatta 48889161  T
Q  305 tgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    || |||||| ||||||||||||  |||||||||||||||||||||||||||||    
T  48889160 tgttcatttaccaccattcaaagtcacattatgatttaaacaacataggcaac 48889108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 16611594 - 16611463
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||| ||||| ||    
T  16611594 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 16611495  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||||||||||||||| |||||||||    
T  16611494 tgttcttttgccaccattcaaaaccacattat 16611463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 206 - 336
Target Start/End: Original strand, 22047659 - 22047790
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||| ||||| ||    
T  22047659 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 22047758  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||||||||||||||| |||||||||    
T  22047759 tgttcttttgccaccattcaaaaccacattat 22047790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 52390966 - 52391083
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||  |||||||||||| |||||||||||||||||| |  ||||||||    
T  52390966 ctaaactaactaaataatcaataaatttgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatattcaaattgtgttattttgccac 52391065  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  52391066 cattcaaaaccacattat 52391083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 205 - 336
Target Start/End: Original strand, 17567619 - 17567751
Alignment:
Q  205 tatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaatt 303  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||| ||||| |    
T  17567619 tatcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaat 17567718  T
Q  304 gtgctcatttgccaccattcaaacccacattat 336  Q
    ||| || |||||||||||| ||| |||||||||    
T  17567719 gtgttcttttgccaccattgaaaaccacattat 17567751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 217 - 336
Target Start/End: Complemental strand, 41612872 - 41612753
Alignment:
Q  217 aactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgcc 316  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||| ||||| |||| || ||||||    
T  41612872 aactaaactaactagataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgcc 41612773  T
Q  317 accattcaaacccacattat 336  Q
    |||||||||| |||||||||    
T  41612772 accattcaaaaccacattat 41612753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 2274484 - 2274601
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| || ||| ||||    
T  2274484 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttcccac 2274583  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  2274584 cattcaaaaccacattat 2274601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 29009362 - 29009245
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  29009362 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 29009263  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  29009262 cattcaaaaccacattat 29009245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 36127939 - 36127822
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||| |||||||||| |||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| || ||||||||    
T  36127939 ctaaactaaccaaataatcaagaaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttcttttgccac 36127840  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| |||||||||    
T  36127839 cattcaaaaccacattat 36127822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 42903760 - 42903877
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  42903760 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 42903859  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  42903860 caatcaaaaccacattat 42903877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 46389464 - 46389347
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  46389464 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 46389365  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  46389364 caatcaaaaccacattat 46389347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 50480354 - 50480471
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  50480354 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 50480453  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  50480454 caatcaaaaccacattat 50480471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 54386626 - 54386509
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  54386626 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 54386527  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  54386526 caatcaaaaccacattat 54386509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 20351161 - 20351030
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacatttt-atcaaacacttgatgtgcaaagtataaaacatattcaaatt 303  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||| ||||||| ||||| |    
T  20351161 atcatatccataacctaaactaactaaataatcaataaaattgtcattgagacattttaatcaaacactttgtgtgcaaagtatcaaacatactcaaa-t 20351063  T
Q  304 gtgctcatttgccaccattcaaacccacattat 336  Q
    ||| || |||||||||||||||| ||| |||||    
T  20351062 gtgttcttttgccaccattcaaaaccaaattat 20351030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 49144033 - 49144149
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||| ||||||||| |||| |  ||||||||    
T  49144033 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaa-atattcaaaatgtgttattttgccac 49144131  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  49144132 caatcaaaaccacattat 49144149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 278 - 357
Target Start/End: Complemental strand, 51807413 - 51807334
Alignment:
Q  278 tgcaaagtataaaacatattcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  51807413 tgcaaagtataaaacatattcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacatagacaac 51807334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 34045878 - 34045762
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||| ||| ||||| |||| |  ||||||||    
T  34045878 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaa-atactcaaaatgtgttattttgccac 34045780  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  34045779 caatcaaaaccacattat 34045762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 46701595 - 46701712
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||  ||||| |||  |  ||||||||    
T  46701595 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatgctcaaaatgtcttattttgccac 46701694  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  46701695 caatcaaaaccacattat 46701712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 220 - 326
Target Start/End: Complemental strand, 4178305 - 4178199
Alignment:
Q  220 taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacc 319  Q
    ||||||||||||||||||||||||||| |||||  | |||||| ||||||||||  |||||||||||| |||  |||||||||| |  ||||||| ||||    
T  4178305 taaactaactaaataatcaataaaattttcatttgggcattttgtcaaacactttgtgtgcaaagtatcaaaagtattcaaattatcttcatttgacacc 4178206  T
Q  320 attcaaa 326  Q
    |||||||    
T  4178205 attcaaa 4178199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 220 - 326
Target Start/End: Complemental strand, 4172307 - 4172201
Alignment:
Q  220 taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacc 319  Q
    ||||||||||||||||||||||||||| |||||  | |||||| ||||||||||  |||||||||||| |||  |||||||||| |  ||||||  ||||    
T  4172307 taaactaactaaataatcaataaaattctcatttgggcattttgtcaaacactttttgtgcaaagtatcaaaagtattcaaattatcttcatttaacacc 4172208  T
Q  320 attcaaa 326  Q
    |||||||    
T  4172207 attcaaa 4172201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 220 - 334
Target Start/End: Original strand, 31045165 - 31045279
Alignment:
Q  220 taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacc 319  Q
    ||||||||||||||||| |||  |||| |||||  | |||||| ||||||||||  |||||||||||| ||||||||||| |||||| |  |||| ||||    
T  31045165 taaactaactaaataataaatgcaattctcattttggcattttgtcaaacactttgtgtgcaaagtatcaaacatattcacattgtgttattttgacacc 31045264  T
Q  320 attcaaacccacatt 334  Q
    ||||||| |||||||    
T  31045265 attcaaaaccacatt 31045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 276 - 436
Alignment:
Q  197 atcatttctatcatttccataactaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||    
T  276 atcatttctatcattttcataactaaactaactaaataattaataaaattgtcattgagacattttatcaaacacgttgtgtgcaaagtataaaacatat 375  T
Q  297 tcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  376 tcaaattgtgttcatttgccaccattcaaagccacattatgatttaaactacataggcaac 436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 129; Significance: 1e-66; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 197 - 356
Target Start/End: Original strand, 15170 - 15330
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  15170 atcatttatatcatttccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtataaaacata 15269  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaa 356  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15270 ttcaaattgtgttcatttgccaccattcaaagccacattatgatttaaacaacataggcaa 15330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 7e-65; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 197 - 357
Target Start/End: Complemental strand, 31769231 - 31769070
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  31769231 atcatttctatcatttccataacctaaactaactaaataatcaataaatttgtcattgagacattttatcaaacactttgtgtgcaaagtataaaacata 31769132  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| || |||||||||||||||| |||||||||||||||||||||||| |||||    
T  31769131 ttcaaattgtgttcttttgccaccattcaaaaccacattatgatttaaacaacataagcaac 31769070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 6320110 - 6320271
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| ||||| ||||||| |||  ||||||||||||||||||||    
T  6320110 atcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgaggcatttgatcaaacgctttgtgtgcaaagtataaaacata 6320209  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  6320210 ttcaaattgtgttcatttgccaccattcaaagccacattatgattttaacaacataggcaac 6320271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 197 - 357
Target Start/End: Original strand, 24088329 - 24088490
Alignment:
Q  197 atcatttctatcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacata 295  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||  ||| ||||||||||||||||    
T  24088329 atcatttctatcatttccataacctaaactaactaaataatcaatataattttcattgagacatttgatcaaacactttgtgtacaaagtataaaacata 24088428  T
Q  296 ttcaaattgtgctcatttgccaccattcaaacccacattatgatttaaacaacataggcaac 357  Q
    ||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||| ||||    
T  24088429 ttcaaattgtgttcatttgccaccattcaaagccacattatcatttaaacaacatagacaac 24088490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 206 - 335
Target Start/End: Complemental strand, 26423514 - 26423384
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||| ||||||| ||||| ||    
T  26423514 atcatatccataacataaactaactaaataaacaataaaattgtcattgaggcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 26423415  T
Q  305 tgctcatttgccaccattcaaacccacatta 335  Q
    || || |||||||||||||||| ||| ||||    
T  26423414 tgatcttttgccaccattcaaaaccatatta 26423384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 6201651 - 6201534
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  6201651 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 6201552  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  6201551 caatcaaaaccacattat 6201534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 11688618 - 11688501
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  11688618 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 11688519  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  11688518 caatcaaaaccacattat 11688501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 22301683 - 22301566
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  22301683 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 22301584  T
Q  319 cattcaaacccacattat 336  Q
     ||||||| |||||||||    
T  22301583 aattcaaaaccacattat 22301566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 30829222 - 30829339
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||| |  ||||||||    
T  30829222 ctaaactaactaaataatcaataaaattgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtgttattttgccac 30829321  T
Q  319 cattcaaacccacattat 336  Q
    || ||||| |||||||||    
T  30829322 caatcaaaaccacattat 30829339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 220 - 336
Target Start/End: Complemental strand, 21601106 - 21600990
Alignment:
Q  220 taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacc 319  Q
    |||||||||||||||||||||| |||| |||||  | |||||||||||||||||  |||||||||||| |||||||||||||||||| ||||||| ||||    
T  21601106 taaactaactaaataatcaatataattctcatttgggcattttatcaaacactttgtgtgcaaagtatcaaacatattcaaattgtgttcatttgtcacc 21601007  T
Q  320 attcaaacccacattat 336  Q
    ||||||| |||||||||    
T  21601006 attcaaaaccacattat 21600990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 3501686 - 3501555
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||| ||||| |||||| ||||||||||  |||||||||||| ||||||| ||||| ||    
T  3501686 atcatatccataacctaaactaactaaataaacaataaaattgtccttgaggcattttctcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 3501587  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||||||||||||||| |||||||||    
T  3501586 tgatcttttgccaccattcaaaaccacattat 3501555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 336
Target Start/End: Complemental strand, 24722445 - 24722314
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||  |||||||||||| ||||||| ||||| ||    
T  24722445 atcatatccataacctaaactaactaaataatcaataaaattgtcattgacgcattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatg 24722346  T
Q  305 tgctcatttgccaccattcaaacccacattat 336  Q
    || || |||| |||||||||||  ||||||||    
T  24722345 tgttcttttgacaccattcaaaaacacattat 24722314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 336
Target Start/End: Complemental strand, 27617218 - 27617101
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||  |||||||||||| ||||||| ||||| |||  || ||||||||    
T  27617218 ctaaactaactaaataatcaataaatttgtcattgacacattttatcaaacactttgtgtgcaaagtatcaaacatactcaaaatgtattcttttgccac 27617119  T
Q  319 cattcaaacccacattat 336  Q
    |||||||| ||| |||||    
T  27617118 cattcaaaaccatattat 27617101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 324
Target Start/End: Complemental strand, 3381258 - 3381182
Alignment:
Q  248 tcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccaccattca 324  Q
    |||||||| ||||||||||| |||||  |||||||  |||||||||||||||||||||| ||||||| |||||||||    
T  3381258 tcattgaggcattttatcaaccactttgtgtgcaatatataaaacatattcaaattgtgttcatttgacaccattca 3381182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 219 - 357
Target Start/End: Complemental strand, 7921 - 7783
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||||| ||||||||||     
T  7921 ctaaactaactaaaaaatcaataaaattgtcattgaggcattttatcaaatactttgtgtgcaaagtataaaacatattcaaattgtgttcatttgccat 7822  T
Q  319 cattcaaacccacattatgatttaaacaacataggcaac 357  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  7821 cattcaaagccacattatgatttaaacaacataggcaac 7783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 206 - 335
Target Start/End: Original strand, 18489 - 18619
Alignment:
Q  206 atcatttccataac-taaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattg 304  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||   ||||||||||| ||||||| ||||| ||    
T  18489 atcatatccataacctaaactaactaaataatcaataaaattgtcattgaggcattttatcaaacactttgcgtgcaaagtatcaaacatactcaaaatg 18588  T
Q  305 tgctcatttgccaccattcaaacccacatta 335  Q
    || || |||||||||||||||| ||||||||    
T  18589 tgttcttttgccaccattcaaaaccacatta 18619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 219 - 315
Target Start/End: Complemental strand, 10857 - 10761
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgc 315  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||  |||| |||||||||||||||||||||||||| ||||||||    
T  10857 ctaaactaactaaataatcaatataattgtcattgagacattttttcaaacactttgtgtgtaaagtataaaacatattcaaattgtgttcatttgc 10761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 219 - 336
Target Start/End: Original strand, 4224 - 4341
Alignment:
Q  219 ctaaactaactaaataatcaataaaattgtcattgagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccac 318  Q
    ||||||||||| ||||||||||| |||| |||||| | || ||||||||||||||  ||||||||  || ||||||| ||||| |||| || ||||||||    
T  4224 ctaaactaactcaataatcaatataattctcattggggcactttatcaaacactttgtgtgcaaaacatcaaacatactcaaaatgtgttcttttgccac 4323  T
Q  319 cattcaaacccacattat 336  Q
    |||| ||| |||||||||    
T  4324 cattaaaaaccacattat 4341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 334
Target Start/End: Original strand, 251048 - 251161
Alignment:
Q  221 aaactaactaaataatcaataaaattgtcatt-gagacattttatcaaacacttgatgtgcaaagtataaaacatattcaaattgtgctcatttgccacc 319  Q
    ||||||| ||||||||||||  |||| ||||| ||| |||||| |||| ||||| ||||| ||| ||| ||||||||||  |||||| | ||||| ||||    
T  251048 aaactaagtaaataatcaatgcaattttcatttgag-cattttgtcaatcactttatgtgtaaaatatcaaacatattcttattgtgttaatttgacacc 251146  T
Q  320 attcaaacccacatt 334  Q
    ||||||| |||||||    
T  251147 attcaaaaccacatt 251161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 246228 - 246180
Alignment:
Q  248 tcattgagacattttatcaaacacttgatgtgcaaagtataaaacatat 296  Q
    ||||| || |||||||||||||||||   ||||||||||||||||||||    
T  246228 tcatttaggcattttatcaaacactttgggtgcaaagtataaaacatat 246180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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