View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20554_high_9 (Length: 331)
Name: NF20554_high_9
Description: NF20554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20554_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 52 - 325
Target Start/End: Original strand, 45791141 - 45791414
Alignment:
| Q |
52 |
attttatacctgaagcttatatcaattttggttaccatttgcagatgatacagaactgtttgatgttcccgcagtttctaatattaggcaggatttaact |
151 |
Q |
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| T |
45791141 |
attttatacctgaagcttatatcaattttggttaccatttgcagatgatacagaactgtttgatgttcccgcagtttctaatattaggcaggatttaact |
45791240 |
T |
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| Q |
152 |
gagtggcaggaaaaacatgccaatcttgttctttctactgtcaaggttgcatctatttttaatttatttaagattccaaaggatttatttacacacataa |
251 |
Q |
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| T |
45791241 |
gagtggcaggaaaaacatgccaatcttgttctttctactgtcaaggttgcatctatttttaatttatttaagattccaaaggatttatttacacacataa |
45791340 |
T |
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| Q |
252 |
tcaaaacacagtgcgtcttgaggattaaatttcccccactattaatacctgtatttgtgaatcagaataatcta |
325 |
Q |
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| T |
45791341 |
tcaaaacacagtgcgtcttgaggattaaatttcccccactattaatacctgtatttgtgaatcagaataatcta |
45791414 |
T |
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