View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20556_low_6 (Length: 701)

Name: NF20556_low_6
Description: NF20556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20556_low_6
NF20556_low_6
[»] chr2 (5 HSPs)
chr2 (16-683)||(41880680-41881344)
chr2 (464-519)||(3409243-3409298)
chr2 (464-519)||(9963789-9963844)
chr2 (464-519)||(44740538-44740593)
chr2 (629-665)||(9174845-9174881)
[»] chr7 (5 HSPs)
chr7 (462-519)||(48634482-48634539)
chr7 (464-519)||(33124730-33124785)
chr7 (470-498)||(3942232-3942260)
chr7 (470-498)||(7447932-7447960)
chr7 (629-665)||(44917510-44917546)
[»] chr3 (7 HSPs)
chr3 (464-519)||(9505176-9505231)
chr3 (473-519)||(1674659-1674705)
chr3 (464-498)||(52934863-52934897)
chr3 (473-519)||(25253732-25253778)
chr3 (629-662)||(44284087-44284120)
chr3 (462-498)||(30743623-30743659)
chr3 (470-498)||(39135405-39135433)
[»] chr4 (5 HSPs)
chr4 (464-498)||(11055281-11055315)
chr4 (464-519)||(52813631-52813686)
chr4 (464-498)||(36644039-36644073)
chr4 (464-498)||(38791743-38791777)
chr4 (470-498)||(40797881-40797909)
[»] chr5 (4 HSPs)
chr5 (464-519)||(1840742-1840797)
chr5 (464-519)||(19282169-19282224)
chr5 (470-498)||(3801425-3801453)
chr5 (470-498)||(36523806-36523834)
[»] chr1 (4 HSPs)
chr1 (464-519)||(51432258-51432313)
chr1 (464-498)||(12224630-12224664)
chr1 (464-498)||(15306544-15306578)
chr1 (464-496)||(20904004-20904036)
[»] chr8 (3 HSPs)
chr8 (464-498)||(32740690-32740724)
chr8 (629-665)||(33714240-33714276)
chr8 (629-661)||(35220731-35220763)
[»] scaffold0223 (1 HSPs)
scaffold0223 (470-507)||(14468-14505)
[»] chr6 (2 HSPs)
chr6 (629-665)||(7148696-7148732)
chr6 (628-664)||(29296300-29296336)


Alignment Details
Target: chr2 (Bit Score: 626; Significance: 0; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 626; E-Value: 0
Query Start/End: Original strand, 16 - 683
Target Start/End: Complemental strand, 41881344 - 41880680
Alignment:
Q  16 atcacctggatagggtgcaatccaagcctgcagcttccaagtccctcgactgtaatcacatgcatcccttcaacagaatatagaggtgctaagcaagcat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41881344 atcacctggatagggtgcaatccaagcctgcagcttccaagtccctcgactgtaatcacatgcatcccttcaacagaatatagaggtgctaagcaagcat 41881245  T
Q  116 tgatagcatagtgtctgaaagaatattttcaaactaaaatcgtaagccttatgttaggatacaagaacgaatcatttcaaaagtagtaggagcgcacagt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  41881244 tgatagcatagtgtctgaaagaatattttcaaactaaaatcgtaagccttatgttaggatacaagaacaaatcatttcaaaagtagtaggagcacacagt 41881145  T
Q  216 atgagaaagaaaaactcacaaggttttcctcaaatttgtatcataatgagaaaccataacagtacaagctccacaaccaccttcaccgcagcctagttta 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41881144 atgagaaagaaaaactcacaaggttttcctcaaatttgtatcataatgagaaaccataacagtacaagctccacaaccaccttcaccgcagcctagttta 41881045  T
Q  316 gtcccagtcagacctatatcttttataccaaatagagtggaaaactataatcagtttagcttcacaaaggaaaccatttaaatcgacaaaccaaaattaa 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41881044 gtcccagtcagacctatatcttttataccaaatagagtggaaaactataatcagtttagcttcacaaaggaaaccatttaaatcgacaaatcaaaattaa 41880945  T
Q  416 gtgcacaagaaaaaacaaaatttcaattaaatcgtgaagtgcttacagattaactcattgaacttggttcatgaaccaaatgactttaacttaagctaaa 515  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  41880944 gtacacaagaaaaaacaaaatttcaattaaatcgtgaagtgcttacagattaactcgctgaacttggttcatgaaccaaatgactttaacttaagctaaa 41880845  T
Q  516 aattggtcttattaagcacatatagcataagtgcttatgtatcaattatttctacaacaatataaaataataataatttgtcatcttactagctatgaac 615  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||    
T  41880844 aattggtcttattaagcacatatagcataagtgcttatgtatcaattatttctacaacaatataaaataataataatttgtcatcttacta---atgaac 41880748  T
Q  616 tgttttaacagctagcttataaaaataagctgaaaatagcttatggacaaagtcctgtttggataaac 683  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41880747 tgttttaacagctagcttataaaaataagctgaaaatagcttatggacatagtcctgtttggataaac 41880680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 3409243 - 3409298
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatgactttaacttaagctaaaaatt 519  Q
    |||||||| ||||||||||||||||||||||||||  | ||||| |||| ||||||    
T  3409243 attaactcgttgaacttggttcatgaaccaaatgaactgaacttgagctgaaaatt 3409298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Complemental strand, 9963844 - 9963789
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatgactttaacttaagctaaaaatt 519  Q
    |||||||| ||||||| ||||||||||||||||||  | |||||||| ||||||||    
T  9963844 attaactcgttgaactgggttcatgaaccaaatgagctgaacttaagttaaaaatt 9963789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 44740538 - 44740593
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatgactttaacttaagctaaaaatt 519  Q
    |||||||| ||||||||||||||||||||||| ||  | ||||| |||||||||||    
T  44740538 attaactcgttgaacttggttcatgaaccaaacgagctgaacttgagctaaaaatt 44740593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 629 - 665
Target Start/End: Original strand, 9174845 - 9174881
Alignment:
Q  629 agcttataaaaataagctgaaaatagcttatggacaa 665  Q
    ||||||| |||||||||||||||||||||||| ||||    
T  9174845 agcttatgaaaataagctgaaaatagcttatgaacaa 9174881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 519
Target Start/End: Complemental strand, 48634539 - 48634482
Alignment:
Q  462 agattaactcattgaacttggttcatgaaccaaatgactttaacttaagctaaaaatt 519  Q
    |||||||||| |||||||||||||||||||||||||| || ||||| |||||||||||    
T  48634539 agattaactcgttgaacttggttcatgaaccaaatgagttgaacttgagctaaaaatt 48634482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Complemental strand, 33124785 - 33124730
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatgactttaacttaagctaaaaatt 519  Q
    |||||||| |||||||||||| ||||||||||||| || ||||| |||| ||||||    
T  33124785 attaactcgttgaacttggtttatgaaccaaatgaattgaacttgagctgaaaatt 33124730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 470 - 498
Target Start/End: Complemental strand, 3942260 - 3942232
Alignment:
Q  470 tcattgaacttggttcatgaaccaaatga 498  Q
    |||||||||||||||||||||||||||||    
T  3942260 tcattgaacttggttcatgaaccaaatga 3942232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 470 - 498
Target Start/End: Complemental strand, 7447960 - 7447932
Alignment:
Q  470 tcattgaacttggttcatgaaccaaatga 498  Q
    |||||||||||||||||||||||||||||    
T  7447960 tcattgaacttggttcatgaaccaaatga 7447932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 629 - 665
Target Start/End: Complemental strand, 44917546 - 44917510
Alignment:
Q  629 agcttataaaaataagctgaaaatagcttatggacaa 665  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  44917546 agcttatacaaataagctgaaaatagcttatgaacaa 44917510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000007; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 9505176 - 9505231
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatgactttaacttaagctaaaaatt 519  Q
    |||||||| |||||||||||||||||||||||||| || ||||| |||| ||||||    
T  9505176 attaactcgttgaacttggttcatgaaccaaatgagttgaacttgagctgaaaatt 9505231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 519
Target Start/End: Complemental strand, 1674705 - 1674659
Alignment:
Q  473 ttgaacttggttcatgaaccaaatgactttaacttaagctaaaaatt 519  Q
    |||||||||||||||||||||||||| || |||||||||| ||||||    
T  1674705 ttgaacttggttcatgaaccaaatgagttgaacttaagctgaaaatt 1674659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 52934897 - 52934863
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatga 498  Q
    |||||||||||||||||||||||||||||||||||    
T  52934897 attaactcattgaacttggttcatgaaccaaatga 52934863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 473 - 519
Target Start/End: Complemental strand, 25253778 - 25253732
Alignment:
Q  473 ttgaacttggttcatgaaccaaatgactttaacttaagctaaaaatt 519  Q
    ||||||||||||||||||||||||||  | ||||| |||||||||||    
T  25253778 ttgaacttggttcatgaaccaaatgagctgaacttgagctaaaaatt 25253732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 629 - 662
Target Start/End: Complemental strand, 44284120 - 44284087
Alignment:
Q  629 agcttataaaaataagctgaaaatagcttatgga 662  Q
    |||||||| |||||||||||||||||||||||||    
T  44284120 agcttatagaaataagctgaaaatagcttatgga 44284087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 462 - 498
Target Start/End: Complemental strand, 30743659 - 30743623
Alignment:
Q  462 agattaactcattgaacttggttcatgaaccaaatga 498  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  30743659 agatgaactcgttgaacttggttcatgaaccaaatga 30743623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 470 - 498
Target Start/End: Complemental strand, 39135433 - 39135405
Alignment:
Q  470 tcattgaacttggttcatgaaccaaatga 498  Q
    |||||||||||||||||||||||||||||    
T  39135433 tcattgaacttggttcatgaaccaaatga 39135405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.0000000003; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 11055281 - 11055315
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatga 498  Q
    |||||||||||||||||||||||||||||||||||    
T  11055281 attaactcattgaacttggttcatgaaccaaatga 11055315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Complemental strand, 52813686 - 52813631
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatgactttaacttaagctaaaaatt 519  Q
    |||||||| ||||||||||||||||||||||| ||  | |||||||||| ||||||    
T  52813686 attaactcgttgaacttggttcatgaaccaaacgagctgaacttaagctgaaaatt 52813631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 36644039 - 36644073
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatga 498  Q
    ||||||||||||||||| |||||||||||||||||    
T  36644039 attaactcattgaactttgttcatgaaccaaatga 36644073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 38791777 - 38791743
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatga 498  Q
    |||||||| ||||||||||||||||||||||||||    
T  38791777 attaactcgttgaacttggttcatgaaccaaatga 38791743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 470 - 498
Target Start/End: Complemental strand, 40797909 - 40797881
Alignment:
Q  470 tcattgaacttggttcatgaaccaaatga 498  Q
    |||||||||||||||||||||||||||||    
T  40797909 tcattgaacttggttcatgaaccaaatga 40797881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.00000002; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 1840742 - 1840797
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatgactttaacttaagctaaaaatt 519  Q
    |||||||| ||||||||||||||||||||||||||  | ||||| |||| ||||||    
T  1840742 attaactcgttgaacttggttcatgaaccaaatgagctgaacttgagctgaaaatt 1840797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 19282169 - 19282224
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatgactttaacttaagctaaaaatt 519  Q
    |||||||| ||||||||||||||||||||||||||  | ||||| |||| ||||||    
T  19282169 attaactcgttgaacttggttcatgaaccaaatgagctgaacttgagctgaaaatt 19282224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 470 - 498
Target Start/End: Original strand, 3801425 - 3801453
Alignment:
Q  470 tcattgaacttggttcatgaaccaaatga 498  Q
    |||||||||||||||||||||||||||||    
T  3801425 tcattgaacttggttcatgaaccaaatga 3801453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 470 - 498
Target Start/End: Complemental strand, 36523834 - 36523806
Alignment:
Q  470 tcattgaacttggttcatgaaccaaatga 498  Q
    |||||||||||||||||||||||||||||    
T  36523834 tcattgaacttggttcatgaaccaaatga 36523806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.00000002; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 519
Target Start/End: Original strand, 51432258 - 51432313
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatgactttaacttaagctaaaaatt 519  Q
    |||||||| ||| |||||||||||||||||||||| || || ||||||| ||||||    
T  51432258 attaactcgttgtacttggttcatgaaccaaatgagttgaaattaagctgaaaatt 51432313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 498
Target Start/End: Original strand, 12224630 - 12224664
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatga 498  Q
    |||||||| ||||||||||||||||||||||||||    
T  12224630 attaactcgttgaacttggttcatgaaccaaatga 12224664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 15306578 - 15306544
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatga 498  Q
    ||||| |||||||||||||||||||||||||||||    
T  15306578 attaattcattgaacttggttcatgaaccaaatga 15306544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 464 - 496
Target Start/End: Original strand, 20904004 - 20904036
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaat 496  Q
    |||||||| ||||||||||||||||||||||||    
T  20904004 attaactcgttgaacttggttcatgaaccaaat 20904036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000006; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 464 - 498
Target Start/End: Complemental strand, 32740724 - 32740690
Alignment:
Q  464 attaactcattgaacttggttcatgaaccaaatga 498  Q
    |||||||||||||| ||||||||||||||||||||    
T  32740724 attaactcattgaatttggttcatgaaccaaatga 32740690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 629 - 665
Target Start/End: Complemental strand, 33714276 - 33714240
Alignment:
Q  629 agcttataaaaataagctgaaaatagcttatggacaa 665  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  33714276 agcttataaaaataagctgaaaacagcttatgaacaa 33714240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 629 - 661
Target Start/End: Complemental strand, 35220763 - 35220731
Alignment:
Q  629 agcttataaaaataagctgaaaatagcttatgg 661  Q
    |||||||||||||||||| ||||||||||||||    
T  35220763 agcttataaaaataagctaaaaatagcttatgg 35220731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 507
Target Start/End: Complemental strand, 14505 - 14468
Alignment:
Q  470 tcattgaacttggttcatgaaccaaatgactttaactt 507  Q
    ||||||||||||||||||||||||||||| || |||||    
T  14505 tcattgaacttggttcatgaaccaaatgatttgaactt 14468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 29; Significance: 0.000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 629 - 665
Target Start/End: Original strand, 7148696 - 7148732
Alignment:
Q  629 agcttataaaaataagctgaaaatagcttatggacaa 665  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  7148696 agcttatgaaaataagttgaaaatagcttatggacaa 7148732  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 628 - 664
Target Start/End: Complemental strand, 29296336 - 29296300
Alignment:
Q  628 tagcttataaaaataagctgaaaatagcttatggaca 664  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  29296336 tagcttatgaaaataagctgaaaataacttatggaca 29296300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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