View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20557_high_13 (Length: 276)
Name: NF20557_high_13
Description: NF20557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20557_high_13 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 4 - 276
Target Start/End: Complemental strand, 33600384 - 33600113
Alignment:
| Q |
4 |
tggaggatttagagcgcatgtgtacttgaattgtcgagaagtaagatattgtatatataattccttttaaattatgaatgaataaaacctatgcctatat |
103 |
Q |
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| T |
33600384 |
tggaggatttagagcgcatgtgtactcgaattgtcgagaagtaagatattgtatatataattccttttaaattatgaatgaataaaacctatgcctatat |
33600285 |
T |
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| Q |
104 |
ttgacnnnnnnnnngtttgttttaaaacttaattttggtcttggattgtttaagatctctaacgagaaccagcctgcttgacttattgataggttgataa |
203 |
Q |
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| T |
33600284 |
ttgactttttttt-gtttgttttaaaacttaattttggtcttggattgtttatgatctctaacgagaactagcctgcttgacttattgataggttgataa |
33600186 |
T |
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| Q |
204 |
ctacttgattttgcttgacttttgaatttaataattgatggccattttgtcaaacacatgcttatctgttcat |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33600185 |
ctacttgattttgcttgacttttgaatttaataattgatggccattttgtcaaacacatgcttatctgttcat |
33600113 |
T |
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