View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20557_low_23 (Length: 216)

Name: NF20557_low_23
Description: NF20557
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20557_low_23
NF20557_low_23
[»] chr7 (40 HSPs)
chr7 (18-216)||(3807697-3807897)
chr7 (116-167)||(3810502-3810553)
chr7 (170-215)||(41054204-41054249)
chr7 (181-216)||(1614557-1614592)
chr7 (181-216)||(25988383-25988418)
chr7 (181-216)||(35838304-35838339)
chr7 (181-216)||(46759656-46759691)
chr7 (181-215)||(3975806-3975840)
chr7 (182-216)||(8144294-8144328)
chr7 (181-215)||(8144626-8144660)
chr7 (181-215)||(11767243-11767277)
chr7 (182-216)||(14543709-14543743)
chr7 (181-215)||(23399610-23399644)
chr7 (182-216)||(23399943-23399977)
chr7 (181-215)||(23676420-23676454)
chr7 (182-216)||(25092159-25092193)
chr7 (181-215)||(26878039-26878073)
chr7 (182-216)||(27458398-27458432)
chr7 (181-215)||(28262711-28262745)
chr7 (181-215)||(29198630-29198664)
chr7 (181-215)||(35470248-35470282)
chr7 (182-216)||(35837923-35837957)
chr7 (182-216)||(46828943-46828977)
chr7 (181-215)||(48192456-48192490)
chr7 (182-215)||(1614872-1614905)
chr7 (182-215)||(3975548-3975581)
chr7 (182-215)||(5233807-5233840)
chr7 (182-215)||(9659657-9659690)
chr7 (170-215)||(23816658-23816702)
chr7 (182-215)||(25092516-25092549)
chr7 (182-215)||(25988717-25988750)
chr7 (181-214)||(29198301-29198334)
chr7 (182-215)||(41053841-41053874)
chr7 (182-215)||(45228886-45228919)
chr7 (182-215)||(48852443-48852476)
chr7 (183-215)||(6589021-6589053)
chr7 (180-216)||(6892227-6892263)
chr7 (183-215)||(16853557-16853589)
chr7 (183-215)||(27037593-27037625)
chr7 (182-214)||(44568325-44568357)
[»] chr3 (46 HSPs)
chr3 (176-215)||(28552014-28552053)
chr3 (180-216)||(29490710-29490746)
chr3 (181-216)||(474375-474410)
chr3 (181-216)||(12740905-12740940)
chr3 (181-216)||(39132873-39132908)
chr3 (181-216)||(47336548-47336583)
chr3 (181-216)||(51550413-51550448)
chr3 (181-216)||(54608830-54608865)
chr3 (182-216)||(474043-474077)
chr3 (181-215)||(9262123-9262157)
chr3 (181-215)||(9603887-9603921)
chr3 (182-216)||(12741238-12741272)
chr3 (181-215)||(28552351-28552385)
chr3 (181-215)||(40545562-40545596)
chr3 (181-215)||(45002019-45002053)
chr3 (182-216)||(47005153-47005187)
chr3 (181-215)||(51550080-51550114)
chr3 (181-215)||(52342193-52342227)
chr3 (182-216)||(53113442-53113476)
chr3 (182-215)||(1721420-1721453)
chr3 (183-216)||(4034717-4034750)
chr3 (182-215)||(14772210-14772243)
chr3 (182-215)||(19844549-19844582)
chr3 (181-214)||(20405192-20405225)
chr3 (182-215)||(21553888-21553921)
chr3 (182-215)||(25615974-25616007)
chr3 (183-216)||(26090045-26090078)
chr3 (175-216)||(29446173-29446214)
chr3 (181-214)||(30106189-30106222)
chr3 (182-215)||(31480135-31480168)
chr3 (181-214)||(39820632-39820665)
chr3 (182-215)||(40277821-40277854)
chr3 (183-216)||(43441270-43441303)
chr3 (181-214)||(47005488-47005521)
chr3 (182-215)||(47336227-47336260)
chr3 (181-214)||(47433837-47433870)
chr3 (182-215)||(54608517-54608550)
chr3 (183-215)||(4035021-4035053)
chr3 (183-215)||(15979338-15979370)
chr3 (183-215)||(22008858-22008890)
chr3 (183-215)||(26089730-26089762)
chr3 (184-216)||(28418867-28418899)
chr3 (183-215)||(40370557-40370589)
chr3 (179-215)||(42446522-42446558)
chr3 (183-215)||(45313831-45313863)
chr3 (183-215)||(49323782-49323814)
[»] chr6 (29 HSPs)
chr6 (177-215)||(3414381-3414419)
chr6 (179-216)||(8170118-8170155)
chr6 (181-216)||(6412216-6412251)
chr6 (181-216)||(10910931-10910966)
chr6 (181-216)||(18024342-18024377)
chr6 (172-215)||(21147393-21147436)
chr6 (181-216)||(22543685-22543720)
chr6 (181-215)||(1007122-1007156)
chr6 (181-215)||(1007477-1007511)
chr6 (182-216)||(3276321-3276355)
chr6 (182-216)||(3968644-3968678)
chr6 (181-215)||(3968977-3969011)
chr6 (182-216)||(12757609-12757643)
chr6 (182-216)||(17765008-17765042)
chr6 (181-215)||(19321099-19321133)
chr6 (182-216)||(19690392-19690426)
chr6 (181-215)||(20467686-20467720)
chr6 (182-216)||(21385250-21385284)
chr6 (181-215)||(21994371-21994405)
chr6 (181-215)||(22543352-22543386)
chr6 (181-215)||(25137325-25137359)
chr6 (182-215)||(6412547-6412580)
chr6 (182-215)||(12299108-12299141)
chr6 (182-215)||(13268108-13268141)
chr6 (182-215)||(21385552-21385585)
chr6 (182-215)||(23502236-23502269)
chr6 (183-216)||(24901239-24901272)
chr6 (180-216)||(24692946-24692982)
chr6 (183-215)||(31198615-31198647)
[»] chr1 (46 HSPs)
chr1 (181-215)||(33045353-33045387)
chr1 (181-216)||(8140432-8140467)
chr1 (181-216)||(10887231-10887266)
chr1 (181-216)||(10887565-10887600)
chr1 (181-216)||(32035755-32035790)
chr1 (181-216)||(36912851-36912886)
chr1 (181-216)||(39747802-39747837)
chr1 (181-216)||(42482977-42483012)
chr1 (181-216)||(45380270-45380305)
chr1 (181-216)||(45638861-45638896)
chr1 (182-216)||(3247197-3247231)
chr1 (182-216)||(7867324-7867358)
chr1 (181-215)||(12360601-12360635)
chr1 (182-216)||(12360935-12360969)
chr1 (181-215)||(15516580-15516614)
chr1 (182-216)||(15526329-15526363)
chr1 (181-215)||(16026906-16026940)
chr1 (182-216)||(19720711-19720745)
chr1 (182-216)||(24654134-24654168)
chr1 (182-216)||(30322928-30322962)
chr1 (182-216)||(33000636-33000670)
chr1 (181-215)||(47819230-47819264)
chr1 (183-216)||(10631164-10631197)
chr1 (182-215)||(10631496-10631529)
chr1 (179-216)||(11822332-11822369)
chr1 (183-216)||(12322937-12322970)
chr1 (182-215)||(24507811-24507844)
chr1 (183-216)||(24977778-24977811)
chr1 (183-216)||(31060787-31060820)
chr1 (182-215)||(33045658-33045691)
chr1 (182-215)||(33234545-33234578)
chr1 (183-216)||(35056530-35056563)
chr1 (182-215)||(38164263-38164296)
chr1 (183-216)||(40718110-40718143)
chr1 (182-215)||(42483239-42483272)
chr1 (182-215)||(47819564-47819597)
chr1 (171-215)||(13770477-13770521)
chr1 (183-215)||(16060853-16060885)
chr1 (183-215)||(24510276-24510308)
chr1 (183-215)||(24653802-24653834)
chr1 (183-215)||(33000305-33000337)
chr1 (175-215)||(35056862-35056902)
chr1 (183-215)||(38151180-38151212)
chr1 (183-215)||(40718442-40718474)
chr1 (183-215)||(41738796-41738828)
chr1 (183-215)||(45638580-45638612)
[»] chr5 (32 HSPs)
chr5 (174-215)||(24443712-24443753)
chr5 (181-216)||(5917124-5917159)
chr5 (181-216)||(19685015-19685050)
chr5 (181-216)||(20690731-20690766)
chr5 (181-216)||(32108806-32108841)
chr5 (181-216)||(35877019-35877054)
chr5 (181-215)||(1104856-1104890)
chr5 (181-215)||(1105116-1105150)
chr5 (182-216)||(1381246-1381280)
chr5 (182-216)||(4736509-4736543)
chr5 (182-216)||(17070534-17070568)
chr5 (182-216)||(18258494-18258528)
chr5 (182-216)||(19565466-19565500)
chr5 (181-215)||(19565799-19565833)
chr5 (182-216)||(37271673-37271707)
chr5 (183-216)||(45138-45171)
chr5 (182-215)||(1381579-1381612)
chr5 (182-215)||(5917428-5917461)
chr5 (182-215)||(18258161-18258194)
chr5 (182-215)||(19685348-19685381)
chr5 (182-215)||(20660947-20660980)
chr5 (182-215)||(20986057-20986090)
chr5 (182-215)||(24443379-24443412)
chr5 (182-215)||(28213372-28213405)
chr5 (183-216)||(30888160-30888193)
chr5 (182-215)||(35876687-35876720)
chr5 (182-215)||(35928063-35928096)
chr5 (183-216)||(35928425-35928458)
chr5 (182-215)||(38170513-38170546)
chr5 (182-215)||(40764414-40764447)
chr5 (183-215)||(6912497-6912529)
chr5 (179-215)||(30800818-30800854)
[»] chr4 (46 HSPs)
chr4 (178-215)||(4211556-4211593)
chr4 (179-215)||(11692758-11692794)
chr4 (180-216)||(12152460-12152496)
chr4 (179-215)||(14487798-14487834)
chr4 (180-216)||(29420504-29420540)
chr4 (181-216)||(11693088-11693123)
chr4 (181-216)||(13631226-13631261)
chr4 (181-216)||(14488154-14488189)
chr4 (181-216)||(14594204-14594239)
chr4 (181-216)||(35464016-35464051)
chr4 (181-216)||(53916014-53916049)
chr4 (181-215)||(12152152-12152186)
chr4 (178-216)||(13073754-13073792)
chr4 (182-216)||(14791773-14791807)
chr4 (182-216)||(25423923-25423957)
chr4 (182-216)||(25424279-25424313)
chr4 (182-216)||(43231087-43231121)
chr4 (181-215)||(53915681-53915715)
chr4 (183-216)||(5827655-5827688)
chr4 (182-215)||(5827941-5827974)
chr4 (181-214)||(13074094-13074127)
chr4 (182-215)||(13530681-13530714)
chr4 (182-215)||(13631567-13631600)
chr4 (183-216)||(13764613-13764646)
chr4 (183-216)||(19321826-19321859)
chr4 (182-215)||(24774044-24774077)
chr4 (182-215)||(29499181-29499214)
chr4 (182-215)||(30046760-30046793)
chr4 (182-215)||(30061101-30061134)
chr4 (183-216)||(31560662-31560695)
chr4 (182-215)||(35119291-35119324)
chr4 (183-216)||(42824058-42824091)
chr4 (182-215)||(43231357-43231390)
chr4 (183-216)||(53308035-53308068)
chr4 (175-216)||(53716913-53716954)
chr4 (182-215)||(54903443-54903476)
chr4 (180-216)||(13479578-13479614)
chr4 (183-215)||(23245231-23245263)
chr4 (180-216)||(23245562-23245598)
chr4 (183-215)||(26412552-26412584)
chr4 (183-215)||(35464350-35464382)
chr4 (183-215)||(42848359-42848391)
chr4 (183-215)||(46115414-46115446)
chr4 (183-215)||(46128548-46128580)
chr4 (183-215)||(46292392-46292424)
chr4 (184-216)||(47136138-47136170)
[»] chr8 (44 HSPs)
chr8 (180-216)||(9496338-9496374)
chr8 (179-215)||(32726239-32726275)
chr8 (181-216)||(3512233-3512268)
chr8 (181-216)||(10337117-10337152)
chr8 (181-216)||(17073805-17073840)
chr8 (181-216)||(17574430-17574465)
chr8 (181-216)||(25600228-25600263)
chr8 (181-216)||(25702776-25702811)
chr8 (181-216)||(35097326-35097361)
chr8 (181-216)||(35346965-35347000)
chr8 (181-215)||(4710188-4710222)
chr8 (182-216)||(7420229-7420263)
chr8 (182-216)||(8298942-8298976)
chr8 (181-215)||(10337417-10337451)
chr8 (182-216)||(11019519-11019553)
chr8 (181-215)||(11019825-11019859)
chr8 (181-215)||(28346726-28346760)
chr8 (182-216)||(32725906-32725940)
chr8 (183-216)||(1778564-1778597)
chr8 (183-216)||(7185971-7186004)
chr8 (183-216)||(8298587-8298620)
chr8 (182-215)||(9496691-9496724)
chr8 (182-215)||(10540750-10540783)
chr8 (182-215)||(11976372-11976405)
chr8 (183-216)||(14489040-14489073)
chr8 (182-215)||(20277691-20277724)
chr8 (182-215)||(20984145-20984178)
chr8 (182-215)||(21064318-21064351)
chr8 (182-215)||(27117944-27117977)
chr8 (182-215)||(28346393-28346426)
chr8 (182-215)||(34963299-34963332)
chr8 (183-216)||(34963631-34963664)
chr8 (183-216)||(35346629-35346662)
chr8 (182-215)||(37536085-37536118)
chr8 (183-216)||(42132864-42132897)
chr8 (183-216)||(42133121-42133154)
chr8 (183-216)||(42430087-42430120)
chr8 (183-215)||(2728565-2728597)
chr8 (181-213)||(4473702-4473734)
chr8 (183-215)||(7326389-7326421)
chr8 (183-215)||(13232530-13232562)
chr8 (183-215)||(30969685-30969717)
chr8 (183-215)||(35097660-35097692)
chr8 (183-215)||(37536387-37536419)
[»] chr2 (37 HSPs)
chr2 (180-216)||(13215057-13215093)
chr2 (181-216)||(20131315-20131350)
chr2 (181-216)||(41451835-41451870)
chr2 (181-216)||(44559060-44559095)
chr2 (182-216)||(4424152-4424186)
chr2 (181-215)||(14003407-14003441)
chr2 (181-215)||(16523293-16523327)
chr2 (182-216)||(16673410-16673444)
chr2 (181-215)||(16673739-16673773)
chr2 (181-215)||(24358614-24358648)
chr2 (182-216)||(25705084-25705118)
chr2 (181-215)||(25705417-25705451)
chr2 (182-216)||(31644840-31644874)
chr2 (181-215)||(31909446-31909480)
chr2 (182-216)||(33576084-33576118)
chr2 (182-216)||(37228732-37228766)
chr2 (183-216)||(146657-146690)
chr2 (177-214)||(2412456-2412493)
chr2 (182-215)||(2481525-2481558)
chr2 (182-215)||(4423894-4423927)
chr2 (181-214)||(10671628-10671661)
chr2 (182-215)||(14003710-14003743)
chr2 (182-215)||(15842791-15842824)
chr2 (182-215)||(16522990-16523023)
chr2 (182-215)||(18113088-18113121)
chr2 (179-216)||(26239127-26239164)
chr2 (182-215)||(29859840-29859873)
chr2 (182-215)||(30215421-30215454)
chr2 (181-214)||(30215840-30215873)
chr2 (183-216)||(34964126-34964159)
chr2 (182-215)||(37911088-37911121)
chr2 (183-216)||(42695868-42695901)
chr2 (183-215)||(5334751-5334783)
chr2 (183-215)||(5335008-5335040)
chr2 (183-215)||(20131649-20131681)
chr2 (184-216)||(20939292-20939324)
chr2 (183-215)||(40124966-40124998)
[»] scaffold0160 (2 HSPs)
scaffold0160 (181-216)||(26998-27033)
scaffold0160 (181-216)||(27331-27366)
[»] scaffold0005 (2 HSPs)
scaffold0005 (181-216)||(223139-223174)
scaffold0005 (182-216)||(47924-47958)
[»] scaffold0684 (1 HSPs)
scaffold0684 (181-215)||(2628-2662)
[»] scaffold0078 (1 HSPs)
scaffold0078 (181-215)||(3750-3784)
[»] scaffold0026 (1 HSPs)
scaffold0026 (181-215)||(82674-82708)
[»] scaffold0024 (1 HSPs)
scaffold0024 (181-215)||(75732-75766)
[»] scaffold0106 (1 HSPs)
scaffold0106 (181-214)||(30935-30968)
[»] scaffold0007 (1 HSPs)
scaffold0007 (183-216)||(2850-2883)
[»] scaffold0001 (1 HSPs)
scaffold0001 (183-216)||(148249-148282)


Alignment Details
Target: chr7 (Bit Score: 142; Significance: 1e-74; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 216
Target Start/End: Original strand, 3807697 - 3807897
Alignment:
Q  18 ctcttgagatactttttagctcatgttaggataactttattctactgcctttagnnnnnnnn--ccctcttttcttgttgccattgtagtcgtcccattg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||||||||||||||    
T  3807697 ctcttgagatactttttagctcatgttaggataactttattctactgtctttagttttttttttccctcttttcttgttgccattgtagtcgtcccattg 3807796  T
Q  116 ataaaaataacacatgtttagtttttcttttacaaatacaaacatatgcattgaatttttatatctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||| ||||||||||||    
T  3807797 ataaaaataacacatgtttaggttttcttttacaaatacaaacatatgcattgcatttttatatctaggctaaaatatagttttggttcctgcaaatatg 3807896  T
Q  216 t 216  Q
    |    
T  3807897 t 3807897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 3810502 - 3810553
Alignment:
Q  116 ataaaaataacacatgtttagtttttcttttacaaatacaaacatatgcatt 167  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||||||||||    
T  3810502 ataaaaataacacatgtttattttttattttccaaatacaaacatatgcatt 3810553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 41054249 - 41054204
Alignment:
Q  170 atttttatatctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||| | ||||||||||| |||||||||||||||||||||||    
T  41054249 atttttatttttaggctaaaatatggttttggtccctgcaaatatg 41054204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 1614557 - 1614592
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1614557 taggctaaaatatggttttggtccctgcaaatatgt 1614592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 25988383 - 25988418
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25988383 taggctaaaatatggttttggtccctgcaaatatgt 25988418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 35838339 - 35838304
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35838339 taggctaaaatatggttttggtccctgcaaatatgt 35838304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 46759656 - 46759691
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  46759656 taggctaaaatatggttttggtccctgcaaatatgt 46759691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 3975840 - 3975806
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  3975840 taggctaaaatatggttttggtccctgcaaatatg 3975806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 8144294 - 8144328
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  8144294 aggctaaaatatggttttggtccctgcaaatatgt 8144328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 8144660 - 8144626
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  8144660 taggctaaaatatggttttggtccctgcaaatatg 8144626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 11767277 - 11767243
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  11767277 taggctaaaatatggttttggtccctgcaaatatg 11767243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 14543709 - 14543743
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  14543709 aggctaaaatatggttttggtccctgcaaatatgt 14543743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 23399610 - 23399644
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  23399610 taggctaaaatatggttttggtccctgcaaatatg 23399644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 23399977 - 23399943
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  23399977 aggctaaaatatggttttggtccctgcaaatatgt 23399943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 23676454 - 23676420
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  23676454 taggctaaaatatggttttggtccctgcaaatatg 23676420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 25092159 - 25092193
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  25092159 aggctaaaatatggttttggtccctgcaaatatgt 25092193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 26878073 - 26878039
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  26878073 taggctaaaatatggttttggtccctgcaaatatg 26878039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 27458398 - 27458432
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  27458398 aggctaaaatatggttttggtccctgcaaatatgt 27458432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 28262711 - 28262745
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  28262711 taggctaaaatatggttttggtccctgcaaatatg 28262745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 29198664 - 29198630
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  29198664 taggctaaaatatggttttggtccctgcaaatatg 29198630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 35470282 - 35470248
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||||||||||||| ||||||||||||||    
T  35470282 taggctaaaatttggttttgatccctgcaaatatg 35470248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 35837923 - 35837957
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  35837923 aggctaaaatatggttttggtccctgcaaatatgt 35837957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 46828943 - 46828977
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  46828943 aggctaaaatatggttttggtccctgcaaatatgt 46828977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 48192490 - 48192456
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  48192490 taggctaaaatatggttttggtccctgcaaatatg 48192456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 1614905 - 1614872
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  1614905 aggctaaaatatggttttggtccctgcaaatatg 1614872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 3975548 - 3975581
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  3975548 aggctaaaatatggttttggtccctgcaaatatg 3975581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 5233807 - 5233840
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  5233807 aggctaaaatatggttttggtccctgcaaatatg 5233840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 9659690 - 9659657
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  9659690 aggctaaaatatggttttggtccctgcaaatatg 9659657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 23816658 - 23816702
Alignment:
Q  170 atttttatatctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| ||||||||||| ||||||| |||||||||||||||    
T  23816658 atttttatat-taggctaaaatatggttttagtccctgcaaatatg 23816702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 25092549 - 25092516
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  25092549 aggctaaaatatggttttggtccctgcaaatatg 25092516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 25988750 - 25988717
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  25988750 aggctaaaatatggttttggtccctgcaaatatg 25988717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 29198301 - 29198334
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatat 214  Q
    ||||||||||| ||||||||||||||||||||||    
T  29198301 taggctaaaatatggttttggtccctgcaaatat 29198334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 41053841 - 41053874
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  41053841 aggctaaaatatggttttggtccctgcaaatatg 41053874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 45228919 - 45228886
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  45228919 aggctaaaatatggttttggtccctgcaaatatg 45228886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 48852443 - 48852476
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  48852443 aggctaaaatatggttttggtccctgcaaatatg 48852476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 6589021 - 6589053
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  6589021 ggctaaaatatggttttggtccctgcaaatatg 6589053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 6892263 - 6892227
Alignment:
Q  180 ctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  6892263 ctaggctaaaatatggttttggtccctgcaaaaatgt 6892227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 16853589 - 16853557
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  16853589 ggctaaaatatggttttggtccctgcaaatatg 16853557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 27037593 - 27037625
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  27037593 ggctaaaatatggttttggtccctgcaaatatg 27037625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 44568325 - 44568357
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatat 214  Q
    |||||||||| ||||||||||||||||||||||    
T  44568325 aggctaaaatatggttttggtccctgcaaatat 44568357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 215
Target Start/End: Original strand, 28552014 - 28552053
Alignment:
Q  176 atatctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  28552014 atatctaggctaaaatatggttttggtccctgcaaatatg 28552053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 29490746 - 29490710
Alignment:
Q  180 ctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||||| ||||||||||||||||||||||||    
T  29490746 ctaggctaaaatatggttttggtccctgcaaatatgt 29490710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 474410 - 474375
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  474410 taggctaaaatatggttttggtccctgcaaatatgt 474375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 12740905 - 12740940
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  12740905 taggctaaaatatggttttggtccctgcaaatatgt 12740940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 39132908 - 39132873
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39132908 taggctaaaatatggttttggtccctgcaaatatgt 39132873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 47336583 - 47336548
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  47336583 taggctaaaatatggttttggtccctgcaaatatgt 47336548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 51550448 - 51550413
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  51550448 taggctaaaatatggttttggtccctgcaaatatgt 51550413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 54608865 - 54608830
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  54608865 taggctaaaatatggttttggtccctgcaaatatgt 54608830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 474043 - 474077
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  474043 aggctaaaatatggttttggtccctgcaaatatgt 474077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 9262157 - 9262123
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  9262157 taggctaaaatatggttttggtccctgcaaatatg 9262123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 9603921 - 9603887
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  9603921 taggctaaaatatggttttggtccctgcaaatatg 9603887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 12741272 - 12741238
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  12741272 aggctaaaatatggttttggtccctgcaaatatgt 12741238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 28552385 - 28552351
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  28552385 taggctaaaatatggttttggtccctgcaaatatg 28552351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 40545562 - 40545596
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  40545562 taggctaaaatatggttttggtccctgcaaatatg 40545596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 45002019 - 45002053
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  45002019 taggctaaaatatggttttggtccctgcaaatatg 45002053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 47005153 - 47005187
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  47005153 aggctaaaatatggttttggtccctgcaaatatgt 47005187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 51550080 - 51550114
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  51550080 taggctaaaatatggttttggtccctgcaaatatg 51550114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 52342193 - 52342227
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  52342193 taggctaaaatatggttttggtccctgcaaatatg 52342227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 53113442 - 53113476
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  53113442 aggctaaaatatggttttggtccctgcaaatatgt 53113476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 1721453 - 1721420
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  1721453 aggctaaaatatggttttggtccctgcaaatatg 1721420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 4034717 - 4034750
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  4034717 ggctaaaatatggttttggtccctgcaaatatgt 4034750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 14772210 - 14772243
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  14772210 aggctaaaatatggttttggtccctgcaaatatg 14772243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 19844582 - 19844549
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  19844582 aggctaaaatatggttttggtccctgcaaatatg 19844549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 20405225 - 20405192
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatat 214  Q
    ||||||||||| ||||||||||||||||||||||    
T  20405225 taggctaaaatatggttttggtccctgcaaatat 20405192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 21553888 - 21553921
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  21553888 aggctaaaatatggttttggtccctgcaaatatg 21553921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 25615974 - 25616007
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  25615974 aggctaaaatatggttttggtccctgcaaatatg 25616007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 26090078 - 26090045
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  26090078 ggctaaaatatggttttggtccctgcaaatatgt 26090045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 29446214 - 29446173
Alignment:
Q  175 tatatctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||    
T  29446214 tatatataggctaaaatatggttttagtccctgcaaatatgt 29446173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 30106222 - 30106189
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatat 214  Q
    ||||||||||| ||||||||||||||||||||||    
T  30106222 taggctaaaatatggttttggtccctgcaaatat 30106189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 31480135 - 31480168
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  31480135 aggctaaaatatggttttggtccctgcaaatatg 31480168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 39820665 - 39820632
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatat 214  Q
    ||||||||||| ||||||||||||||||||||||    
T  39820665 taggctaaaatatggttttggtccctgcaaatat 39820632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 40277821 - 40277854
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  40277821 aggctaaaatgtggttttggtccctgcaaatatg 40277854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 43441270 - 43441303
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  43441270 ggctaaaatatggttttggtccctgcaaatatgt 43441303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 47005521 - 47005488
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatat 214  Q
    ||||||||||| ||||||||||||||||||||||    
T  47005521 taggctaaaatatggttttggtccctgcaaatat 47005488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 47336227 - 47336260
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  47336227 aggctaaaatatggttttggtccctgcaaatatg 47336260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 47433870 - 47433837
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatat 214  Q
    ||||||||||| ||||||||||||||||||||||    
T  47433870 taggctaaaatatggttttggtccctgcaaatat 47433837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 54608517 - 54608550
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  54608517 aggctaaaatatggttttggtccctgcaaatatg 54608550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 4035053 - 4035021
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  4035053 ggctaaaatatggttttggtccctgcaaatatg 4035021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 15979338 - 15979370
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  15979338 ggctaaaatatggttttggtccctgcaaatatg 15979370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 22008890 - 22008858
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  22008890 ggctaaaatatggttttggtccctgcaaatatg 22008858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 26089730 - 26089762
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  26089730 ggctaaaatatggttttggtccctgcaaatatg 26089762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 28418899 - 28418867
Alignment:
Q  184 gctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||| ||||||||||||||||||||||||    
T  28418899 gctaaaatatggttttggtccctgcaaatatgt 28418867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 40370589 - 40370557
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  40370589 ggctaaaatatggttttggtccctgcaaatatg 40370557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 42446522 - 42446558
Alignment:
Q  179 tctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||||| || ||||||||||||||||||||    
T  42446522 tctaggctaaaatatgcttttggtccctgcaaatatg 42446558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 45313863 - 45313831
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  45313863 ggctaaaatatggttttggtccctgcaaatatg 45313831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 49323782 - 49323814
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  49323782 ggctaaaatatggttttggtccctgcaaatatg 49323814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 3414381 - 3414419
Alignment:
Q  177 tatctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  3414381 tatctaggctaaaatatggttttggtccctgcaaatatg 3414419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 8170155 - 8170118
Alignment:
Q  179 tctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  8170155 tctaggctaaaatatggttttggtccctgcaaatatgt 8170118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 6412216 - 6412251
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  6412216 taggctaaaatatggttttggtccctgcaaatatgt 6412251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 10910966 - 10910931
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  10910966 taggctaaaatatggttttggtccctgcaaatatgt 10910931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 18024377 - 18024342
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  18024377 taggctaaaatatggttttggtccctgcaaatatgt 18024342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 21147393 - 21147436
Alignment:
Q  172 ttttatatctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||| || ||||||||||| |||||||||||||||||||||||    
T  21147393 ttttaaatataggctaaaatatggttttggtccctgcaaatatg 21147436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 22543720 - 22543685
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  22543720 taggctaaaatatggttttggtccctgcaaatatgt 22543685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 1007122 - 1007156
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  1007122 taggctaaaatatggttttggtccctgcaaatatg 1007156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 1007511 - 1007477
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  1007511 taggctaaaatatggttttggtccctgcaaatatg 1007477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 3276355 - 3276321
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  3276355 aggctaaaatatggttttggtccctgcaaatatgt 3276321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 3968644 - 3968678
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  3968644 aggctaaaatatggttttggtccctgcaaatatgt 3968678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 3969011 - 3968977
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  3969011 taggctaaaatatggttttggtccctgcaaatatg 3968977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 12757609 - 12757643
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  12757609 aggctaaaatatggttttggtccctgcaaatatgt 12757643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 17765008 - 17765042
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  17765008 aggctaaaatatggttttggtccctgcaaatatgt 17765042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 19321133 - 19321099
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  19321133 taggctaaaatatggttttggtccctgcaaatatg 19321099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 19690392 - 19690426
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  19690392 aggctaaaatatggttttggtccctgcaaatatgt 19690426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 20467720 - 20467686
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  20467720 taggctaaaatatggttttggtccctgcaaatatg 20467686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 21385250 - 21385284
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  21385250 aggctaaaatatggttttggtccctgcaaatatgt 21385284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 21994405 - 21994371
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  21994405 taggctaaaatatggttttggtccctgcaaatatg 21994371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 22543352 - 22543386
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  22543352 taggctaaaatatggttttggtccctgcaaatatg 22543386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 25137359 - 25137325
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  25137359 taggctaaaatatggttttggtccctgcaaatatg 25137325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 6412580 - 6412547
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  6412580 aggctaaaatatggttttggtccctgcaaatatg 6412547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 12299141 - 12299108
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  12299141 aggctaaaatatggttttggtccctgcaaatatg 12299108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 13268108 - 13268141
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  13268108 aggctaaaatatggttttggtccctgcaaatatg 13268141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 21385585 - 21385552
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  21385585 aggctaaaatatggttttggtccctgcaaatatg 21385552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 23502236 - 23502269
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  23502236 aggctaaaatatggttttggtccctgcaaatatg 23502269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 24901239 - 24901272
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  24901239 ggctaaaatatggttttggtccctgcaaatatgt 24901272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 24692982 - 24692946
Alignment:
Q  180 ctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  24692982 ctaggctaaaatatggttttagtccctgcaaatatgt 24692946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 31198615 - 31198647
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  31198615 ggctaaaatatggttttggtccctgcaaatatg 31198647  T

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Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 33045353 - 33045387
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||||||||||||||||||||||||||||    
T  33045353 taggctaaaatttggttttggtccctgcaaatatg 33045387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 8140432 - 8140467
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  8140432 taggctaaaatatggttttggtccctgcaaatatgt 8140467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 10887231 - 10887266
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  10887231 taggctaaaatatggttttggtccctgcaaatatgt 10887266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 10887600 - 10887565
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  10887600 taggctaaaatatggttttggtccctgcaaatatgt 10887565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 32035790 - 32035755
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  32035790 taggctaaaatatggttttggtccctgcaaatatgt 32035755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 36912851 - 36912886
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  36912851 taggctaaaatatggttttggtccctgcaaatatgt 36912886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 39747837 - 39747802
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39747837 taggctaaaatatggttttggtccctgcaaatatgt 39747802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 42482977 - 42483012
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  42482977 taggctaaaatatggttttggtccctgcaaatatgt 42483012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 45380270 - 45380305
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  45380270 taggctaaaatatggttttggtccctgcaaatatgt 45380305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 45638896 - 45638861
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  45638896 taggctaaaatatggttttggtccctgcaaatatgt 45638861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 3247197 - 3247231
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  3247197 aggctaaaatatggttttggtccctgcaaatatgt 3247231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 7867358 - 7867324
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  7867358 aggctaaaatatggttttggtccctgcaaatatgt 7867324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 12360601 - 12360635
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  12360601 taggctaaaatatggttttggtccctgcaaatatg 12360635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 12360969 - 12360935
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  12360969 aggctaaaatatggttttggtccctgcaaatatgt 12360935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 15516580 - 15516614
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  15516580 taggctaaaatatggttttggtccctgcaaatatg 15516614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 15526363 - 15526329
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  15526363 aggctaaaatatggttttggtccctgcaaatatgt 15526329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 16026940 - 16026906
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  16026940 taggctaaaatatggttttggtccctgcaaatatg 16026906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 19720711 - 19720745
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  19720711 aggctaaaatatggttttggtccctgcaaatatgt 19720745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 24654168 - 24654134
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  24654168 aggctaaaatatggttttggtccctgcaaatatgt 24654134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 30322928 - 30322962
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  30322928 aggctaaaatatggttttggtccctgcaaatatgt 30322962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 33000670 - 33000636
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  33000670 aggctaaaatatggttttggtccctgcaaatatgt 33000636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 47819230 - 47819264
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  47819230 taggctaaaatatggttttggtccctgcaaatatg 47819264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 10631164 - 10631197
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  10631164 ggctaaaatatggttttggtccctgcaaatatgt 10631197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 10631529 - 10631496
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  10631529 aggctaaaatatggttttggtccctgcaaatatg 10631496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 11822369 - 11822332
Alignment:
Q  179 tctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  11822369 tctaggctaaaatatggttttagtccctgcaaatatgt 11822332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 12322970 - 12322937
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  12322970 ggctaaaatatggttttggtccctgcaaatatgt 12322937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 24507844 - 24507811
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  24507844 aggctaaaatatggttttggtccctgcaaatatg 24507811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 24977778 - 24977811
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  24977778 ggctaaaatatggttttggtccctgcaaatatgt 24977811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 31060787 - 31060820
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  31060787 ggctaaaatatggttttggtccctgcaaatatgt 31060820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 33045691 - 33045658
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  33045691 aggctaaaatatggttttggtccctgcaaatatg 33045658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 33234545 - 33234578
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  33234545 aggctaaaatatggttttggtccctgcaaatatg 33234578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 35056530 - 35056563
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  35056530 ggctaaaatatggttttggtccctgcaaatatgt 35056563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 38164296 - 38164263
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  38164296 aggctaaaatatggttttggtccctgcaaatatg 38164263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 40718110 - 40718143
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  40718110 ggctaaaatatggttttggtccctgcaaatatgt 40718143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 42483272 - 42483239
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  42483272 aggctaaaatatggttttggtccctgcaaatatg 42483239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 47819597 - 47819564
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  47819597 aggctaaaatatggttttggtccctgcaaatatg 47819564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 215
Target Start/End: Original strand, 13770477 - 13770521
Alignment:
Q  171 tttttatatctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||| |||| ||||||||||| ||||||| |||||||||||||||    
T  13770477 ttttaatatataggctaaaatatggttttagtccctgcaaatatg 13770521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 16060885 - 16060853
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  16060885 ggctaaaatatggttttggtccctgcaaatatg 16060853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 24510308 - 24510276
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  24510308 ggctaaaatatggttttggtccctgcaaatatg 24510276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 24653802 - 24653834
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  24653802 ggctaaaatatggttttggtccctgcaaatatg 24653834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 33000305 - 33000337
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  33000305 ggctaaaatatggttttggtccctgcaaatatg 33000337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Complemental strand, 35056902 - 35056862
Alignment:
Q  175 tatatctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||| ||||||||||| || ||||||||||||||||||||    
T  35056902 tatatataggctaaaatatgattttggtccctgcaaatatg 35056862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 38151212 - 38151180
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  38151212 ggctaaaatatggttttggtccctgcaaatatg 38151180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 40718474 - 40718442
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  40718474 ggctaaaatatggttttggtccctgcaaatatg 40718442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 41738796 - 41738828
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  41738796 ggctaaaatatggttttggtccctgcaaatatg 41738828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 45638580 - 45638612
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  45638580 ggctaaaatatggttttggtccctgcaaatatg 45638612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 24443753 - 24443712
Alignment:
Q  174 ttatatctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  24443753 ttatatataggctaaaatatggttttggtccctgcaaatatg 24443712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 5917124 - 5917159
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  5917124 taggctaaaatatggttttggtccctgcaaatatgt 5917159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 19685015 - 19685050
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19685015 taggctaaaatatggttttggtccctgcaaatatgt 19685050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 20690731 - 20690766
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  20690731 taggctaaaatatggttttggtccctgcaaatatgt 20690766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 32108806 - 32108841
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  32108806 taggctaaaatatggttttggtccctgcaaatatgt 32108841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 35877054 - 35877019
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35877054 taggctaaaatatggttttggtccctgcaaatatgt 35877019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 1104856 - 1104890
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  1104856 taggctaaaatatggttttggtccctgcaaatatg 1104890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 1105150 - 1105116
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  1105150 taggctaaaatatggttttggtccctgcaaatatg 1105116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 1381246 - 1381280
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  1381246 aggctaaaatatggttttggtccctgcaaatatgt 1381280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 4736543 - 4736509
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  4736543 aggctaaaatatggttttggtccctgcaaatatgt 4736509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 17070534 - 17070568
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  17070534 aggctaaaatatggttttggtccctgcaaatatgt 17070568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 18258528 - 18258494
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  18258528 aggctaaaatatggttttggtccctgcaaatatgt 18258494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 19565466 - 19565500
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  19565466 aggctaaaatatggttttggtccctgcaaatatgt 19565500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 19565833 - 19565799
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  19565833 taggctaaaatatggttttggtccctgcaaatatg 19565799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 37271707 - 37271673
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  37271707 aggctaaaatatggttttggtccctgcaaatatgt 37271673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 45138 - 45171
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  45138 ggctaaaatatggttttggtccctgcaaatatgt 45171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 1381612 - 1381579
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  1381612 aggctaaaatatggttttggtccctgcaaatatg 1381579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 5917461 - 5917428
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  5917461 aggctaaaatatggttttggtccctgcaaatatg 5917428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 18258161 - 18258194
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  18258161 aggctaaaatatggttttggtccctgcaaatatg 18258194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 19685381 - 19685348
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  19685381 aggctaaaatatggttttggtccctgcaaatatg 19685348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 20660947 - 20660980
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  20660947 aggctaaaatatggttttggtccctgcaaatatg 20660980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 20986090 - 20986057
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  20986090 aggctaaaatatggttttggtccctgcaaatatg 20986057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 24443379 - 24443412
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  24443379 aggctaaaatatggttttggtccctgcaaatatg 24443412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 28213372 - 28213405
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  28213372 aggctaaaatatggttttggtccctgcaaatatg 28213405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 30888160 - 30888193
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  30888160 ggctaaaatatggttttggtccctgcaaatatgt 30888193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 35876687 - 35876720
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  35876687 aggctaaaatatggttttggtccctgcaaatatg 35876720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 35928063 - 35928096
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  35928063 aggctaaaatatggttttggtccctgcaaatatg 35928096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 35928458 - 35928425
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  35928458 ggctaaaatatggttttggtccctgcaaatatgt 35928425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 38170513 - 38170546
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  38170513 aggctaaaatatggttttggtccctgcaaatatg 38170546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 40764414 - 40764447
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  40764414 aggctaaaatatggttttggtccctgcaaatatg 40764447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 6912497 - 6912529
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  6912497 ggctaaaatatggttttggtccctgcaaatatg 6912529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 30800854 - 30800818
Alignment:
Q  179 tctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  30800854 tctaggctaaaatatggttttagtccctgcaaatatg 30800818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000003; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 4211556 - 4211593
Alignment:
Q  178 atctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||||||| |||||||||||||||||||||||    
T  4211556 atctaggctaaaatatggttttggtccctgcaaatatg 4211593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 11692758 - 11692794
Alignment:
Q  179 tctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||||| |||||||||||||||||||||||    
T  11692758 tctaggctaaaatgtggttttggtccctgcaaatatg 11692794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 12152496 - 12152460
Alignment:
Q  180 ctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||||| ||||||||||||||||||||||||    
T  12152496 ctaggctaaaatatggttttggtccctgcaaatatgt 12152460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 14487798 - 14487834
Alignment:
Q  179 tctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||||| |||||||||||||||||||||||    
T  14487798 tctaggctaaaatatggttttggtccctgcaaatatg 14487834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 29420540 - 29420504
Alignment:
Q  180 ctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||||| ||||||||||||||||||||||||    
T  29420540 ctaggctaaaatatggttttggtccctgcaaatatgt 29420504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 11693123 - 11693088
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  11693123 taggctaaaatatggttttggtccctgcaaatatgt 11693088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 13631226 - 13631261
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  13631226 taggctaaaatatggttttggtccctgcaaatatgt 13631261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 14488189 - 14488154
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  14488189 taggctaaaatatggttttggtccctgcaaatatgt 14488154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 14594204 - 14594239
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  14594204 taggctaaaatatggttttggtccctgcaaatatgt 14594239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 35464016 - 35464051
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35464016 taggctaaaatatggttttggtccctgcaaatatgt 35464051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 53916049 - 53916014
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  53916049 taggctaaaatatggttttggtccctgcaaatatgt 53916014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 12152152 - 12152186
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  12152152 taggctaaaatatggttttggtccctgcaaatatg 12152186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Original strand, 13073754 - 13073792
Alignment:
Q  178 atctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||| ||||||||| ||||||||||||||||||||||||    
T  13073754 atcttggctaaaatatggttttggtccctgcaaatatgt 13073792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 14791807 - 14791773
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  14791807 aggctaaaatatggttttggtccctgcaaatatgt 14791773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 25423923 - 25423957
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  25423923 aggctaaaatatggttttggtccctgcaaatatgt 25423957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 25424313 - 25424279
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  25424313 aggctaaaatatggttttggtccctgcaaatatgt 25424279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 43231087 - 43231121
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  43231087 aggctaaaatatggttttggtccctgcaaatatgt 43231121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 53915681 - 53915715
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  53915681 taggctaaaatatggttttggtccctgcaaatatg 53915715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 5827655 - 5827688
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  5827655 ggctaaaatatggttttggtccctgcaaatatgt 5827688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 5827974 - 5827941
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  5827974 aggctaaaatatggttttggtccctgcaaatatg 5827941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 13074127 - 13074094
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatat 214  Q
    ||||||||||| ||||||||||||||||||||||    
T  13074127 taggctaaaatatggttttggtccctgcaaatat 13074094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 13530714 - 13530681
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  13530714 aggctaaaatatggttttggtccctgcaaatatg 13530681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 13631600 - 13631567
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  13631600 aggctaaaatatggttttggtccctgcaaatatg 13631567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 13764613 - 13764646
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  13764613 ggctaaaatatggttttggtccctgcaaatatgt 13764646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 19321859 - 19321826
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  19321859 ggctaaaatatggttttggtccctgcaaatatgt 19321826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 24774044 - 24774077
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  24774044 aggctaaaatatggttttggtccctgcaaatatg 24774077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 29499181 - 29499214
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  29499181 aggctaaaatatggttttggtccctgcaaatatg 29499214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 30046793 - 30046760
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  30046793 aggctaaaatatggttttggtccctgcaaatatg 30046760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 30061134 - 30061101
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  30061134 aggctaaaatatggttttggtccctgcaaatatg 30061101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 31560695 - 31560662
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  31560695 ggctaaaatatggttttggtccctgcaaatatgt 31560662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 35119291 - 35119324
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  35119291 aggctaaaatatggttttggtccctgcaaatatg 35119324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 42824091 - 42824058
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  42824091 ggctaaaatatggttttggtccctgcaaatatgt 42824058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 43231390 - 43231357
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  43231390 aggctaaaatatggttttggtccctgcaaatatg 43231357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 53308068 - 53308035
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  53308068 ggctaaaatatggttttggtccctgcaaatatgt 53308035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 53716913 - 53716954
Alignment:
Q  175 tatatctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||    
T  53716913 tatatataggctaaaatatggttttagtccctgcaaatatgt 53716954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 54903476 - 54903443
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  54903476 aggctaaaatatggttttggtccctgcaaatatg 54903443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 13479614 - 13479578
Alignment:
Q  180 ctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  13479614 ctaggctaaaatatggttttagtccctgcaaatatgt 13479578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 23245231 - 23245263
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  23245231 ggctaaaatatggttttggtccctgcaaatatg 23245263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 23245598 - 23245562
Alignment:
Q  180 ctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||||| |||||||| |||||||||||||||    
T  23245598 ctaggctaaaatatggttttgatccctgcaaatatgt 23245562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 26412584 - 26412552
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  26412584 ggctaaaatatggttttggtccctgcaaatatg 26412552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 35464382 - 35464350
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  35464382 ggctaaaatatggttttggtccctgcaaatatg 35464350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 42848391 - 42848359
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  42848391 ggctaaaatatggttttggtccctgcaaatatg 42848359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 46115414 - 46115446
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  46115414 ggctaaaatatggttttggtccctgcaaatatg 46115446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 46128548 - 46128580
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  46128548 ggctaaaatatggttttggtccctgcaaatatg 46128580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 46292392 - 46292424
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  46292392 ggctaaaatatggttttggtccctgcaaatatg 46292424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 47136170 - 47136138
Alignment:
Q  184 gctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||| ||||||||||||||||||||||||    
T  47136170 gctaaaatatggttttggtccctgcaaatatgt 47136138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 9496338 - 9496374
Alignment:
Q  180 ctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||||| ||||||||||||||||||||||||    
T  9496338 ctaggctaaaatatggttttggtccctgcaaatatgt 9496374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 32726275 - 32726239
Alignment:
Q  179 tctaggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||||| |||||||||||||||||||||||    
T  32726275 tctaggctaaaatatggttttggtccctgcaaatatg 32726239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 3512268 - 3512233
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  3512268 taggctaaaatatggttttggtccctgcaaatatgt 3512233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 10337117 - 10337152
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  10337117 taggctaaaatatggttttggtccctgcaaatatgt 10337152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 17073805 - 17073840
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  17073805 taggctaaaatatggttttggtccctgcaaatatgt 17073840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 17574465 - 17574430
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  17574465 taggctaaaatatggttttggtccctgcaaatatgt 17574430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 25600228 - 25600263
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25600228 taggctaaaatatggttttggtccctgcaaatatgt 25600263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 25702811 - 25702776
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25702811 taggctaaaatatggttttggtccctgcaaatatgt 25702776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 35097326 - 35097361
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35097326 taggctaaaatatggttttggtccctgcaaatatgt 35097361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 35347000 - 35346965
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  35347000 taggctaaaatatggttttggtccctgcaaatatgt 35346965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 4710222 - 4710188
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  4710222 taggctaaaatatggttttggtccctgcaaatatg 4710188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 7420229 - 7420263
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  7420229 aggctaaaatatggttttggtccctgcaaatatgt 7420263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 8298976 - 8298942
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  8298976 aggctaaaatatggttttggtccctgcaaatatgt 8298942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 10337451 - 10337417
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  10337451 taggctaaaatatggttttggtccctgcaaatatg 10337417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 11019519 - 11019553
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  11019519 aggctaaaatatggttttggtccctgcaaatatgt 11019553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 11019859 - 11019825
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  11019859 taggctaaaatatggttttggtccctgcaaatatg 11019825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 28346760 - 28346726
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  28346760 taggctaaaatatggttttggtccctgcaaatatg 28346726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 32725906 - 32725940
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  32725906 aggctaaaatatggttttggtccctgcaaatatgt 32725940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 1778564 - 1778597
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  1778564 ggctaaaatatggttttggtccctgcaaatatgt 1778597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 7186004 - 7185971
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  7186004 ggctaaaatatggttttggtccctgcaaatatgt 7185971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 8298587 - 8298620
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  8298587 ggctaaaatatggttttggtccctgcaaatatgt 8298620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 9496724 - 9496691
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  9496724 aggctaaaatatggttttggtccctgcaaatatg 9496691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 10540783 - 10540750
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  10540783 aggctaaaatatggttttggtccctgcaaatatg 10540750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 11976372 - 11976405
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  11976372 aggctaaaatatggttttggtccctgcaaatatg 11976405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 14489073 - 14489040
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  14489073 ggctaaaatatggttttggtccctgcaaatatgt 14489040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 20277691 - 20277724
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  20277691 aggctaaaatatggttttggtccctgcaaatatg 20277724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 20984145 - 20984178
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  20984145 aggctaaaatatggttttggtccctgcaaatatg 20984178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 21064318 - 21064351
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  21064318 aggctaaaatatggttttggtccctgcaaatatg 21064351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 27117977 - 27117944
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  27117977 aggctaaaatatggttttggtccctgcaaatatg 27117944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 28346393 - 28346426
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  28346393 aggctaaaatatggttttggtccctgcaaatatg 28346426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 34963299 - 34963332
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  34963299 aggctaaaatatggttttggtccctgcaaatatg 34963332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 34963664 - 34963631
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  34963664 ggctaaaatatggttttggtccctgcaaatatgt 34963631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 35346629 - 35346662
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  35346629 ggctaaaatatggttttggtccctgcaaatatgt 35346662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 37536085 - 37536118
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  37536085 aggctaaaatatggttttggtccctgcaaatatg 37536118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 42132864 - 42132897
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  42132864 ggctaaaatatggttttggtccctgcaaatatgt 42132897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 42133154 - 42133121
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  42133154 ggctaaaatatggttttggtccctgcaaatatgt 42133121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 42430120 - 42430087
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  42430120 ggctaaaatatggttttggtccctgcaaatatgt 42430087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 2728597 - 2728565
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  2728597 ggctaaaatatggttttggtccctgcaaatatg 2728565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 4473702 - 4473734
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaata 213  Q
    ||||||||||| |||||||||||||||||||||    
T  4473702 taggctaaaatatggttttggtccctgcaaata 4473734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 7326421 - 7326389
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  7326421 ggctaaaatatggttttggtccctgcaaatatg 7326389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 13232562 - 13232530
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  13232562 ggctaaaatatggttttggtccctgcaaatatg 13232530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 30969717 - 30969685
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  30969717 ggctaaaatatggttttggtccctgcaaatatg 30969685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 35097692 - 35097660
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  35097692 ggctaaaatatggttttggtccctgcaaatatg 35097660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 37536419 - 37536387
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  37536419 ggctaaaatatggttttggtccctgcaaatatg 37536387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 13215057 - 13215093
Alignment:
Q  180 ctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||||| ||||||||||||||||||||||||    
T  13215057 ctaggctaaaatatggttttggtccctgcaaatatgt 13215093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 20131315 - 20131350
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  20131315 taggctaaaatatggttttggtccctgcaaatatgt 20131350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 41451835 - 41451870
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  41451835 taggctaaaatatggttttggtccctgcaaatatgt 41451870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 44559060 - 44559095
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  44559060 taggctaaaatatggttttggtccctgcaaatatgt 44559095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 4424186 - 4424152
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  4424186 aggctaaaatatggttttggtccctgcaaatatgt 4424152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 14003407 - 14003441
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  14003407 taggctaaaatatggttttggtccctgcaaatatg 14003441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 16523327 - 16523293
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  16523327 taggctaaaatatggttttggtccctgcaaatatg 16523293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 16673410 - 16673444
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  16673410 aggctaaaatatggttttggtccctgcaaatatgt 16673444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 16673773 - 16673739
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  16673773 taggctaaaatatggttttggtccctgcaaatatg 16673739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 24358614 - 24358648
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  24358614 taggctaaaatatggttttggtccctgcaaatatg 24358648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 25705084 - 25705118
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  25705084 aggctaaaatatggttttggtccctgcaaatatgt 25705118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 25705451 - 25705417
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  25705451 taggctaaaatatggttttggtccctgcaaatatg 25705417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 31644840 - 31644874
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  31644840 aggctaaaatatggttttggtccctgcaaatatgt 31644874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 31909480 - 31909446
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  31909480 taggctaaaatatggttttggtccctgcaaatatg 31909446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Complemental strand, 33576118 - 33576084
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  33576118 aggctaaaatatggttttggtccctgcaaatatgt 33576084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 37228732 - 37228766
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  37228732 aggctaaaatatggttttggtccctgcaaatatgt 37228766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 146690 - 146657
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  146690 ggctaaaatatggttttggtccctgcaaatatgt 146657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 2412493 - 2412456
Alignment:
Q  177 tatctaggctaaaatttggttttggtccctgcaaatat 214  Q
    ||||||||||||||| || |||||||||||||||||||    
T  2412493 tatctaggctaaaatatgtttttggtccctgcaaatat 2412456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 2481558 - 2481525
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  2481558 aggctaaaatatggttttggtccctgcaaatatg 2481525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 4423894 - 4423927
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  4423894 aggctaaaatatggttttggtccctgcaaatatg 4423927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 214
Target Start/End: Original strand, 10671628 - 10671661
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatat 214  Q
    ||||||||||| ||||||||||||||||||||||    
T  10671628 taggctaaaatatggttttggtccctgcaaatat 10671661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 14003743 - 14003710
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  14003743 aggctaaaatatggttttggtccctgcaaatatg 14003710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 15842824 - 15842791
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  15842824 aggctaaaatatggttttggtccctgcaaatatg 15842791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 16522990 - 16523023
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  16522990 aggctaaaatatggttttggtccctgcaaatatg 16523023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 18113088 - 18113121
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  18113088 aggctaaaatatggttttggtccctgcaaatatg 18113121  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 26239164 - 26239127
Alignment:
Q  179 tctaggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  26239164 tctaggctaaaatatggttttagtccctgcaaatatgt 26239127  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 29859873 - 29859840
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  29859873 aggctaaaatatggttttggtccctgcaaatatg 29859840  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Original strand, 30215421 - 30215454
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  30215421 aggctaaaatatggttttggtccctgcaaatatg 30215454  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 30215873 - 30215840
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatat 214  Q
    ||||||||||| ||||||||||||||||||||||    
T  30215873 taggctaaaatatggttttggtccctgcaaatat 30215840  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 34964159 - 34964126
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  34964159 ggctaaaatatggttttggtccctgcaaatatgt 34964126  T

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Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 182 - 215
Target Start/End: Complemental strand, 37911121 - 37911088
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatg 215  Q
    |||||||||| |||||||||||||||||||||||    
T  37911121 aggctaaaatatggttttggtccctgcaaatatg 37911088  T

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Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Original strand, 42695868 - 42695901
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  42695868 ggctaaaatatggttttggtccctgcaaatatgt 42695901  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 5334751 - 5334783
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  5334751 ggctaaaatatggttttggtccctgcaaatatg 5334783  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 5335040 - 5335008
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  5335040 ggctaaaatatggttttggtccctgcaaatatg 5335008  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Complemental strand, 20131681 - 20131649
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  20131681 ggctaaaatatggttttggtccctgcaaatatg 20131649  T

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Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 216
Target Start/End: Complemental strand, 20939324 - 20939292
Alignment:
Q  184 gctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||| ||||||||||||||||||||||||    
T  20939324 gctaaaatatggttttggtccctgcaaatatgt 20939292  T

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Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 215
Target Start/End: Original strand, 40124966 - 40124998
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||| |||||||||||||||||||||||    
T  40124966 ggctaaaatatggttttggtccctgcaaatatg 40124998  T

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Target: scaffold0160 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 26998 - 27033
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||| |||||||||||||||||||||||||||||    
T  26998 taggctcaaatttggttttggtccctgcaaatatgt 27033  T

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Target: scaffold0160; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 27366 - 27331
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  27366 taggctaaaatatggttttggtccctgcaaatatgt 27331  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 223174 - 223139
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||||| ||||||||||||||||||||||||    
T  223174 taggctaaaatatggttttggtccctgcaaatatgt 223139  T

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Target: scaffold0005; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 216
Target Start/End: Original strand, 47924 - 47958
Alignment:
Q  182 aggctaaaatttggttttggtccctgcaaatatgt 216  Q
    |||||||||| ||||||||||||||||||||||||    
T  47924 aggctaaaatatggttttggtccctgcaaatatgt 47958  T

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Target: scaffold0684 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 2662 - 2628
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  2662 taggctaaaatatggttttggtccctgcaaatatg 2628  T

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Target: scaffold0078 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Original strand, 3750 - 3784
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  3750 taggctaaaatatggttttggtccctgcaaatatg 3784  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 82708 - 82674
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  82708 taggctaaaatatggttttggtccctgcaaatatg 82674  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 215
Target Start/End: Complemental strand, 75766 - 75732
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatatg 215  Q
    ||||||||||| |||||||||||||||||||||||    
T  75766 taggctaaaatatggttttggtccctgcaaatatg 75732  T

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Target: scaffold0106 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 30968 - 30935
Alignment:
Q  181 taggctaaaatttggttttggtccctgcaaatat 214  Q
    ||||||||||| ||||||||||||||||||||||    
T  30968 taggctaaaatatggttttggtccctgcaaatat 30935  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 2883 - 2850
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  2883 ggctaaaatatggttttggtccctgcaaatatgt 2850  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 183 - 216
Target Start/End: Complemental strand, 148282 - 148249
Alignment:
Q  183 ggctaaaatttggttttggtccctgcaaatatgt 216  Q
    ||||||||| ||||||||||||||||||||||||    
T  148282 ggctaaaatatggttttggtccctgcaaatatgt 148249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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