View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20559_high_26 (Length: 261)
Name: NF20559_high_26
Description: NF20559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20559_high_26 |
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Alignment Details
Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 13 - 247
Target Start/End: Complemental strand, 14526954 - 14526720
Alignment:
| Q |
13 |
aaaattcggaacaaagatgcttgtgttatgctctacttgatggccacatgttatcataactgtctctgctcttggttctgctattatagtttctgatagt |
112 |
Q |
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| T |
14526954 |
aaaattcggaacaaagatgcttgtgttatgctctacttgatggccacatgttatcataactgtctttgctcttggttctgctattatagtttctgatagt |
14526855 |
T |
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| Q |
113 |
agtacaaacttgattagaagtagtttgaggcattgagaaaatatgagagggactggtttcttcattttctggatggtccaatctgaatcactttctttgg |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14526854 |
agtacaaacttgattagaagtagtttgaggcattgagaaaatatgagagggactggtttcttcattttctggatggtccaatctgaatcactttctttgg |
14526755 |
T |
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| Q |
213 |
ttgattatattgtttacaatatttatgatcttagt |
247 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
14526754 |
ttgattatattgtttacaatatttatgatcttagt |
14526720 |
T |
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