View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20562_high_28 (Length: 214)

Name: NF20562_high_28
Description: NF20562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20562_high_28
NF20562_high_28
[»] chr5 (32 HSPs)
chr5 (19-102)||(40563446-40563529)
chr5 (18-102)||(28318675-28318759)
chr5 (19-101)||(36339172-36339254)
chr5 (25-98)||(33210372-33210445)
chr5 (19-100)||(33678155-33678236)
chr5 (19-102)||(25929558-25929641)
chr5 (19-100)||(480000-480081)
chr5 (19-100)||(9910368-9910449)
chr5 (17-100)||(4616700-4616783)
chr5 (25-100)||(29959879-29959954)
chr5 (19-97)||(3024488-3024566)
chr5 (19-97)||(8258395-8258473)
chr5 (25-98)||(701943-702016)
chr5 (19-100)||(9629906-9629987)
chr5 (19-100)||(13118801-13118882)
chr5 (19-100)||(40803319-40803400)
chr5 (17-100)||(38293623-38293706)
chr5 (19-101)||(9604758-9604840)
chr5 (19-100)||(42597802-42597882)
chr5 (19-99)||(27979014-27979094)
chr5 (25-100)||(30753783-30753858)
chr5 (25-103)||(13126977-13127055)
chr5 (19-97)||(36428233-36428311)
chr5 (52-100)||(32993685-32993733)
chr5 (19-98)||(6560828-6560906)
chr5 (19-98)||(21605650-21605728)
chr5 (19-102)||(43237679-43237761)
chr5 (19-97)||(9913504-9913582)
chr5 (54-96)||(39041687-39041729)
chr5 (19-97)||(42486931-42487009)
chr5 (19-88)||(2851702-2851771)
chr5 (19-100)||(34302646-34302726)
[»] chr4 (45 HSPs)
chr4 (19-100)||(48647347-48647428)
chr4 (19-100)||(50607684-50607765)
chr4 (19-101)||(50383655-50383737)
chr4 (17-97)||(23059093-23059173)
chr4 (17-100)||(56104725-56104808)
chr4 (19-97)||(8256465-8256543)
chr4 (19-97)||(8269883-8269961)
chr4 (19-101)||(42177666-42177748)
chr4 (19-101)||(53936838-53936920)
chr4 (19-100)||(582768-582849)
chr4 (19-98)||(26117748-26117827)
chr4 (19-100)||(126582-126663)
chr4 (25-98)||(30348496-30348568)
chr4 (19-100)||(43363327-43363408)
chr4 (19-100)||(45692950-45693031)
chr4 (19-106)||(9356708-9356795)
chr4 (19-98)||(24980267-24980346)
chr4 (19-101)||(1856800-1856882)
chr4 (19-97)||(54996100-54996178)
chr4 (19-100)||(4720488-4720569)
chr4 (19-100)||(24535811-24535892)
chr4 (19-100)||(27990865-27990946)
chr4 (19-100)||(32845979-32846060)
chr4 (19-100)||(33491487-33491568)
chr4 (19-79)||(36631360-36631420)
chr4 (19-91)||(38008162-38008234)
chr4 (25-100)||(3763115-3763190)
chr4 (19-101)||(54506198-54506280)
chr4 (45-98)||(12356765-12356818)
chr4 (19-100)||(27761726-27761807)
chr4 (30-100)||(31998726-31998798)
chr4 (19-80)||(43147512-43147573)
chr4 (19-100)||(56302833-56302914)
chr4 (30-98)||(32289242-32289310)
chr4 (19-102)||(3716323-3716405)
chr4 (19-101)||(30342824-30342905)
chr4 (26-100)||(43734860-43734934)
chr4 (26-100)||(43735131-43735205)
chr4 (19-100)||(14802712-14802792)
chr4 (19-100)||(29581967-29582047)
chr4 (19-100)||(34828722-34828803)
chr4 (63-100)||(49286979-49287015)
chr4 (19-100)||(50732861-50732942)
chr4 (19-100)||(50775774-50775855)
chr4 (19-100)||(53389173-53389253)
[»] chr8 (32 HSPs)
chr8 (101-166)||(33414590-33414656)
chr8 (17-100)||(2749630-2749713)
chr8 (19-100)||(29454535-29454616)
chr8 (19-101)||(2261028-2261110)
chr8 (19-100)||(117809-117890)
chr8 (19-100)||(26522292-26522373)
chr8 (19-100)||(36667233-36667314)
chr8 (19-100)||(37676263-37676344)
chr8 (19-100)||(44542139-44542220)
chr8 (19-98)||(1043060-1043139)
chr8 (19-98)||(34633865-34633944)
chr8 (19-100)||(4214821-4214902)
chr8 (19-100)||(39300414-39300495)
chr8 (19-98)||(40267479-40267558)
chr8 (19-101)||(9497537-9497619)
chr8 (19-97)||(29265921-29265999)
chr8 (19-100)||(6631231-6631312)
chr8 (25-98)||(26988719-26988792)
chr8 (19-100)||(36162190-36162271)
chr8 (17-80)||(38329773-38329836)
chr8 (19-97)||(27847512-27847590)
chr8 (19-97)||(40578696-40578774)
chr8 (19-97)||(40776944-40777022)
chr8 (19-97)||(41720250-41720328)
chr8 (28-101)||(43842178-43842251)
chr8 (54-98)||(5328451-5328495)
chr8 (19-102)||(28090190-28090272)
chr8 (64-101)||(5215692-5215728)
chr8 (63-100)||(23870630-23870666)
chr8 (19-104)||(26439849-26439934)
chr8 (19-100)||(34166236-34166317)
chr8 (19-100)||(37511088-37511168)
[»] chr1 (51 HSPs)
chr1 (19-100)||(25702783-25702864)
chr1 (19-100)||(17554143-17554224)
chr1 (19-101)||(48977202-48977284)
chr1 (19-100)||(477760-477841)
chr1 (19-100)||(14153008-14153089)
chr1 (19-100)||(24381316-24381397)
chr1 (19-100)||(35874264-35874345)
chr1 (19-102)||(6526754-6526837)
chr1 (19-100)||(34038490-34038571)
chr1 (19-100)||(38717754-38717835)
chr1 (19-100)||(44263646-44263727)
chr1 (25-97)||(46234831-46234903)
chr1 (19-102)||(2249892-2249975)
chr1 (19-102)||(31075936-31076019)
chr1 (19-99)||(31530637-31530719)
chr1 (19-102)||(51787794-51787877)
chr1 (19-101)||(12105485-12105567)
chr1 (19-97)||(52345927-52346005)
chr1 (19-100)||(6965932-6966013)
chr1 (19-100)||(32710070-32710151)
chr1 (19-100)||(45622810-45622891)
chr1 (19-100)||(47544295-47544376)
chr1 (19-100)||(51056197-51056277)
chr1 (19-99)||(42275662-42275742)
chr1 (19-102)||(52861623-52861706)
chr1 (19-97)||(6329571-6329648)
chr1 (32-98)||(46362359-46362425)
chr1 (19-100)||(8396357-8396438)
chr1 (19-100)||(38260802-38260883)
chr1 (19-100)||(47693206-47693287)
chr1 (27-100)||(48760125-48760198)
chr1 (19-100)||(52180234-52180315)
chr1 (19-98)||(30263908-30263987)
chr1 (19-101)||(18641887-18641968)
chr1 (19-101)||(30321217-30321299)
chr1 (17-86)||(7489246-7489315)
chr1 (19-100)||(10348352-10348432)
chr1 (19-100)||(24003746-24003827)
chr1 (19-100)||(27295058-27295138)
chr1 (63-103)||(44382386-44382426)
chr1 (17-101)||(48616771-48616854)
chr1 (19-98)||(51984936-51985014)
chr1 (19-97)||(51781430-51781507)
chr1 (19-100)||(922168-922248)
chr1 (63-100)||(7489319-7489356)
chr1 (19-100)||(12907279-12907360)
chr1 (19-100)||(13203243-13203324)
chr1 (19-100)||(16482576-16482656)
chr1 (17-97)||(32805735-32805816)
chr1 (19-100)||(3399148-3399231)
chr1 (19-80)||(7227882-7227947)
[»] chr7 (31 HSPs)
chr7 (19-102)||(30891276-30891359)
chr7 (17-100)||(5583187-5583270)
chr7 (19-102)||(24812077-24812160)
chr7 (19-100)||(6791763-6791844)
chr7 (19-100)||(35357701-35357782)
chr7 (19-100)||(41968748-41968829)
chr7 (19-101)||(30076658-30076740)
chr7 (19-100)||(24953254-24953335)
chr7 (19-100)||(28265079-28265160)
chr7 (19-100)||(35291652-35291733)
chr7 (19-100)||(47642497-47642578)
chr7 (19-97)||(1806484-1806562)
chr7 (19-101)||(18519913-18519995)
chr7 (19-97)||(23110756-23110834)
chr7 (17-91)||(45232373-45232447)
chr7 (19-97)||(46291425-46291503)
chr7 (19-100)||(11750747-11750828)
chr7 (19-100)||(15715904-15715985)
chr7 (19-100)||(47369545-47369626)
chr7 (17-100)||(17306923-17307006)
chr7 (19-101)||(26605380-26605462)
chr7 (19-98)||(40941877-40941955)
chr7 (54-100)||(41771769-41771815)
chr7 (45-98)||(36533399-36533452)
chr7 (19-102)||(3909926-3910008)
chr7 (19-98)||(15954133-15954212)
chr7 (19-77)||(38665911-38665969)
chr7 (63-100)||(6855137-6855174)
chr7 (19-100)||(15584865-15584945)
chr7 (19-100)||(23608317-23608398)
chr7 (19-100)||(30624049-30624129)
[»] chr6 (19 HSPs)
chr6 (19-102)||(8549880-8549963)
chr6 (19-102)||(4509428-4509511)
chr6 (25-100)||(9686776-9686851)
chr6 (19-101)||(9661751-9661833)
chr6 (19-98)||(14778911-14778993)
chr6 (19-100)||(1244815-1244896)
chr6 (19-99)||(529122-529202)
chr6 (19-99)||(4576386-4576466)
chr6 (19-102)||(33574496-33574579)
chr6 (19-101)||(23416493-23416575)
chr6 (19-100)||(243212-243293)
chr6 (19-100)||(3141365-3141446)
chr6 (17-98)||(8310190-8310271)
chr6 (19-100)||(22755241-22755322)
chr6 (19-98)||(2258905-2258983)
chr6 (19-101)||(33573998-33574079)
chr6 (19-100)||(1096221-1096301)
chr6 (64-101)||(2564764-2564801)
chr6 (19-99)||(13719112-13719192)
[»] chr3 (62 HSPs)
chr3 (19-100)||(42622175-42622256)
chr3 (19-100)||(44522023-44522104)
chr3 (19-101)||(46671336-46671418)
chr3 (19-100)||(29491663-29491744)
chr3 (19-98)||(36098875-36098952)
chr3 (17-101)||(40021078-40021162)
chr3 (19-98)||(40477759-40477838)
chr3 (19-98)||(53289558-53289637)
chr3 (19-100)||(32636626-32636707)
chr3 (19-100)||(40727674-40727755)
chr3 (19-100)||(43745673-43745754)
chr3 (19-99)||(46507678-46507758)
chr3 (19-102)||(1129454-1129537)
chr3 (19-102)||(33006297-33006380)
chr3 (20-119)||(50247205-50247304)
chr3 (19-102)||(50412398-50412481)
chr3 (17-100)||(51756415-51756497)
chr3 (19-100)||(1020975-1021056)
chr3 (19-100)||(26457281-26457362)
chr3 (19-100)||(26885297-26885378)
chr3 (19-100)||(29389023-29389104)
chr3 (19-100)||(54428495-54428576)
chr3 (19-91)||(47745836-47745908)
chr3 (19-101)||(26849923-26850005)
chr3 (19-97)||(50257802-50257880)
chr3 (19-100)||(7352493-7352574)
chr3 (19-99)||(26012527-26012608)
chr3 (19-100)||(30349006-30349087)
chr3 (19-100)||(35137435-35137516)
chr3 (19-100)||(35500791-35500872)
chr3 (19-100)||(51350958-51351039)
chr3 (29-97)||(34825285-34825353)
chr3 (23-79)||(36375720-36375776)
chr3 (19-98)||(13756636-13756715)
chr3 (19-102)||(38785408-38785490)
chr3 (23-102)||(40473832-40473911)
chr3 (25-100)||(54788356-54788431)
chr3 (19-97)||(42478690-42478768)
chr3 (19-100)||(7862151-7862232)
chr3 (19-100)||(11140247-11140327)
chr3 (19-100)||(14654108-14654189)
chr3 (19-100)||(23456454-23456535)
chr3 (19-100)||(44653175-44653256)
chr3 (17-100)||(4817333-4817417)
chr3 (39-99)||(24169956-24170016)
chr3 (25-101)||(37521759-37521835)
chr3 (19-98)||(35389608-35389687)
chr3 (19-98)||(41282860-41282939)
chr3 (63-102)||(41982755-41982793)
chr3 (19-86)||(51344388-51344455)
chr3 (30-100)||(16136959-16137029)
chr3 (19-97)||(29347586-29347663)
chr3 (63-100)||(9251858-9251895)
chr3 (19-100)||(9506903-9506984)
chr3 (19-100)||(9514878-9514959)
chr3 (19-100)||(25482569-25482650)
chr3 (19-100)||(27082672-27082752)
chr3 (19-100)||(42067579-42067659)
chr3 (19-100)||(42364253-42364333)
chr3 (19-75)||(10279325-10279381)
chr3 (19-99)||(15996821-15996901)
chr3 (19-79)||(41982004-41982064)
[»] chr2 (25 HSPs)
chr2 (19-101)||(9589112-9589194)
chr2 (19-101)||(45157529-45157611)
chr2 (19-100)||(1580567-1580648)
chr2 (19-98)||(4298227-4298306)
chr2 (19-102)||(4740225-4740308)
chr2 (19-100)||(35896738-35896819)
chr2 (19-100)||(39620191-39620272)
chr2 (19-100)||(40947089-40947170)
chr2 (17-97)||(3260965-3261045)
chr2 (19-99)||(34091696-34091776)
chr2 (19-98)||(30980882-30980961)
chr2 (19-101)||(17451610-17451692)
chr2 (17-98)||(38064660-38064742)
chr2 (19-101)||(4049286-4049368)
chr2 (19-97)||(18999045-18999123)
chr2 (19-100)||(6945340-6945421)
chr2 (25-98)||(7673631-7673704)
chr2 (19-100)||(21404524-21404605)
chr2 (19-100)||(42849653-42849734)
chr2 (19-98)||(9122482-9122561)
chr2 (19-101)||(40495464-40495546)
chr2 (45-98)||(27400727-27400780)
chr2 (19-100)||(32602629-32602710)
chr2 (45-100)||(14839806-14839861)
chr2 (19-100)||(11598114-11598195)
[»] scaffold0184 (1 HSPs)
scaffold0184 (27-101)||(16916-16990)
[»] scaffold0078 (1 HSPs)
scaffold0078 (27-101)||(55854-55928)
[»] scaffold0432 (1 HSPs)
scaffold0432 (19-100)||(3355-3436)
[»] scaffold0308 (1 HSPs)
scaffold0308 (19-99)||(7211-7291)
[»] scaffold0005 (1 HSPs)
scaffold0005 (19-100)||(36935-37015)


Alignment Details
Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 40563446 - 40563529
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||||||||||||||| |||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  40563446 aaaaataactcatttaactattattctaaagagtgagtgtaccagtgcactcaaatatattgagtgtaccataaaatttgccaa 40563529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 28318675 - 28318759
Alignment:
Q  18 caaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||| || ||||||||| || ||| |||||||||||||||| |||||||||||||||| || |||||||||||||||||||||    
T  28318675 caaaaacaattcatttaactatgaatttaaagagtgagtgtaccagtacactcaaatatagtgggtgtaccataaaatttgccaa 28318759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 36339172 - 36339254
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| |||||| |||||| |||||||||  |||||||||||||||||| |||||||||| |||||||||    
T  36339172 aaaaacaactcatttaaccattaatttaaagaatgagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcca 36339254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 33210445 - 33210372
Alignment:
Q  25 aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||||||| |||||| ||||||||||||||||  |||||||||||||||||| |||||||||| ||||||    
T  33210445 aactcatttaaccattaatttaaagagtgagtgtaccggtacactcaaatatattgggtgtaccatagaatttg 33210372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 33678236 - 33678155
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| || ||| ||||||||||||||||  ||||||||||||||| || |||||||||| ||||||||    
T  33678236 aaaaataactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcc 33678155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 25929641 - 25929558
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||||||| ||||||| |||||| ||||||||| || |||  |||||||||||||||||| |||||||||| ||||||||||    
T  25929641 aaaaataacttatttaactattaatttaaagagtgggtatacccgtacactcaaatatattgggtgtaccatagaatttgccaa 25929558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 480000 - 480081
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| ||||||||||||||||   |||||||||||||| ||  ||||||||||||||||||    
T  480000 aaaaacaactcatttaactattaatttaaagagtgagtgtaccgatacactcaaatatactggatgtaccataaaatttgcc 480081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 9910368 - 9910449
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| ||||||||||||||||  ||||||||||||||| || |||||||||| ||||||||    
T  9910368 aaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcc 9910449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 4616783 - 4616700
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||| ||||||||| |||||| |||||| |||||||||  |||||||||||||||||   ||||||||| ||||||||    
T  4616783 tcaaaaataattcatttaactattaatttaaagaatgagtgtaccggtacactcaaatatattagatgtaccatataatttgcc 4616700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 29959954 - 29959879
Alignment:
Q  25 aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||| |||||| ||||||||||||||||   ||||||||||||||||  |||||||||| ||||||||    
T  29959954 aactcatttaaccattaatttaaagagtgagtgtactgatacactcaaatatattaggtgtaccatagaatttgcc 29959879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 3024488 - 3024566
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||||||||||| || ||| |||||||||| ||||| |||||||||||||||| ||  |||||||||||||||    
T  3024488 aaaaacaactcatttaactataaatttaaagagtgaatgtactagtacactcaaatatagtggatgtaccataaaattt 3024566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 8258473 - 8258395
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    |||||||||||||||||| || ||| ||||||||| ||||||  ||||||||||||||| || |||||||||| |||||    
T  8258473 aaaaataactcatttaactatgaatttaaagagtgcgtgtaccggtacactcaaatatagtgggtgtaccatagaattt 8258395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 702016 - 701943
Alignment:
Q  25 aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||||||| |||||| |||||||||||||||| ||| |||||| |||||||  |||||||||| ||||||    
T  702016 aactcatttaactattaatttaaagagtgagtgtacgagtgcactcatatatattaggtgtaccatagaatttg 701943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 9629987 - 9629906
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||| ||||||||  |||||| |||||||| ||||||   ||||||||||||||||| ||||||||||| ||||||||    
T  9629987 aaaaataattcatttaattattaatttaaagagttagtgtaacggtacactcaaatatattaagtgtaccatagaatttgcc 9629906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 13118882 - 13118801
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||| ||||||| |||||| ||||||||||||||||  ||||||| |||||||||   ||||||||| ||||||||    
T  13118882 aaaaataacttatttaactattaatttaaagagtgagtgtaccggtacacttaaatatattagatgtaccatagaatttgcc 13118801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 40803400 - 40803319
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| || ||| |||| ||||||||||   ||||||||||||||| ||| ||||||||| ||||||||    
T  40803400 aaaaataactcatttaactatgaatttaaaaagtgagtgtatcggtacactcaaatatagtgaatgtaccatagaatttgcc 40803319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 38293706 - 38293623
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||| |||||||||||| |||||| |||||||||||||||     ||||||||||||||||  ||||||||| ||||||||    
T  38293706 tcaaaaacaactcatttaactattaatttaaagagtgagtgtattgacacactcaaatatattggatgtaccatagaatttgcc 38293623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 9604758 - 9604840
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| || ||||||||| || ||| ||||||||||||||||  ||||||||||||||| || ||||| |||| |||||||||    
T  9604758 aaaaacaattcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtatcatagaatttgcca 9604840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 42597802 - 42597882
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| || ||| |||||| |||||||||  ||||||||||||||  ||| ||||||||| ||||||||    
T  42597802 aaaaataactcatttaactatgaatttaaagaatgagtgtaccggtacactcaaatatgatga-tgtaccatagaatttgcc 42597882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 27979094 - 27979014
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgc 99  Q
    ||||| |||||||||||| |||||| |||||||| |||||||   |||||||||||||||||  |||| |||| |||||||    
T  27979094 aaaaacaactcatttaaccattaatttaaagagtaagtgtaccgatacactcaaatatattggatgtatcatagaatttgc 27979014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Original strand, 30753783 - 30753858
Alignment:
Q  25 aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||| |||||| |||||||||||||||   || |||  ||||||||||  ||||||||||||||||||    
T  30753783 aactcatttaactattaatttaaagagtgagtgtattggtgcacctaaatatattggatgtaccataaaatttgcc 30753858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 25 - 103
Target Start/End: Complemental strand, 13127055 - 13126977
Alignment:
Q  25 aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaag 103  Q
    |||||||||||| |||||| |||||||| ||| |||  ||||||| |||||||||   ||||||||| |||||||||||    
T  13127055 aactcatttaaccattaatttaaagagtaagtataccggtacacttaaatatattagatgtaccatagaatttgccaag 13126977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 36428233 - 36428311
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||||||||||| |||| | |||||||||  |||||  ||||||||||||||||||  ||||||||| |||||    
T  36428233 aaaaacaactcatttaactattagtttaaagagtggatgtaccggtacactcaaatatattggatgtaccatagaattt 36428311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 32993685 - 32993733
Alignment:
Q  52 tgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||  |||||||||||||||||| |||||||||| ||||||||    
T  32993685 tgagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 32993733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 6560906 - 6560828
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||||||||||||| |||||| ||| || |  |||||| | ||||||||||| ||||| |||||||||| ||||||    
T  6560906 aaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaat-tattgggtgtaccatagaatttg 6560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 21605728 - 21605650
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||||||||||||| |||||| |||||| |  |||||| | ||||||||||| | ||| |||||||||| ||||||    
T  21605728 aaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaat-tgttgggtgtaccatagaatttg 21605650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 43237679 - 43237761
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||||||||||||||| |||||| |||  | |  |||||| | ||||||||||| ||||| |||||||||| ||||||||||    
T  43237679 aaaaataactcatttaactattaatttaagaatttggtgtaccaatacactcaaat-tattgggtgtaccatagaatttgccaa 43237761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 9913504 - 9913582
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||||||||||| || | | |||||||||||||||   ||||||||||||||| || |||||| ||| |||||    
T  9913504 aaaaacaactcatttaactatgagtttaaagagtgagtgtatcggtacactcaaatataatgggtgtactatagaattt 9913582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 39041687 - 39041729
Alignment:
Q  54 agtgtacaagtacactcaaatatattgagtgtaccataaaatt 96  Q
    ||||||| | |||||||||||||||||||||||| ||||||||    
T  39041687 agtgtaccaatacactcaaatatattgagtgtactataaaatt 39041729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 42486931 - 42487009
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    |||||||||| ||||||| |||||| |||| |||| |||||   |||||||||||||||||   ||||||||| |||||    
T  42486931 aaaaataacttatttaactattaatttaaaaagtgggtgtagcggtacactcaaatatattagttgtaccatagaattt 42487009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 2851771 - 2851702
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtacc 88  Q
    ||||| |||||||||||| || ||| |||| ||||||||||   ||||||||||||||| || |||||||    
T  2851771 aaaaacaactcatttaactatgaatttaaaaagtgagtgtatcggtacactcaaatatagtgggtgtacc 2851702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 34302726 - 34302646
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| ||| || |   ||||| | ||||||||||| ||||| |||||||||| ||||||||    
T  34302726 aaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaat-tattgggtgtaccatagaatttgcc 34302646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 6e-27; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 48647347 - 48647428
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||    
T  48647347 aaaaataactcatttaactattaatctaaagagtgagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 48647428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 50607765 - 50607684
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| ||||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  50607765 aaaaacaactcatttaaccattaatttaaagagtgcgtgtaccggtacactcaaatatattgggtgtaccataaaatttgcc 50607684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 50383655 - 50383737
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| |||||| ||||||||||||||||  ||||||||||||||||||  ||||||||| |||||||||    
T  50383655 aaaaacaactcatttaactattaatttaaagagtgagtgtaccggtacactcaaatatattggatgtaccatataatttgcca 50383737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 23059093 - 23059173
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||   ||||||||||||||||| |||||||||| |||||    
T  23059093 tcaaaaacaactcatttaacgattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaattt 23059173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 56104725 - 56104808
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||  ||||||| ||||||||||  ||||||||| ||||||||    
T  56104725 tcaaaaacaactcatttaactattaatttaaagagtgagtgtaccggtacacttaaatatattggatgtaccatagaatttgcc 56104808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 8256543 - 8256465
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||||||||||| || ||| |||||||| ||||||| |||||||||||||||| ||||||||||||| |||||    
T  8256543 aaaaacaactcatttaactatgaatttaaagagttagtgtactagtacactcaaatatagtgagtgtaccatagaattt 8256465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 8269961 - 8269883
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||||||||||| || ||| |||||||| ||||||| |||||||||||||||| ||||||||||||| |||||    
T  8269961 aaaaacaactcatttaactatgaatttaaagagttagtgtactagtacactcaaatatagtgagtgtaccatagaattt 8269883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 42177666 - 42177748
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| |||||| |||||||||||| |||  | |||||||||||||||| |||||||||| |||||||||    
T  42177666 aaaaacaactcatttaaccattaatttaaagagtgagtataccggaacactcaaatatattgggtgtaccatagaatttgcca 42177748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 53936838 - 53936920
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| |||||| |||||| || ||||||  |||||||||||||||||| |||||||||| |||||||||    
T  53936838 aaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcca 53936920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 582849 - 582768
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| ||| ||||||||||||  ||||||||||||||| || |||||||||||||||||||    
T  582849 aaaaacaactcatttaactatgaatttaatgagtgagtgtaccggtacactcaaatatagtgggtgtaccataaaatttgcc 582768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 26117827 - 26117748
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||| |||||||||||| |||||| |||||| |||||||||   |||||||||||||||||  ||||||||||||||||    
T  26117827 aaaaacaactcatttaactattaatttaaagaatgagtgtactgatacactcaaatatattggatgtaccataaaatttg 26117748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 126663 - 126582
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| |||||||||| |||||  ||||||||||||||| |||||||||| || ||||||||    
T  126663 aaaaagaactcatttaactatgaatttaaagagtgaatgtaccggtacactcaaatatagtgagtgtaccgtagaatttgcc 126582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 30348496 - 30348568
Alignment:
Q  25 aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||||||| |||||| ||||||||||||||||  |||||||||||||||||  ||||| |||||||||||    
T  30348496 aactcatttaaccattaatttaaagagtgagtgtac-cgtacactcaaatatattaggtgtatcataaaatttg 30348568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 43363408 - 43363327
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| ||||||| || | ||| | ||||||||||||||||  |||||||||||||||||||    
T  43363408 aaaaacaactcatttaactattaatttaaagagcgaatataccaatacactcaaatatattaggtgtaccataaaatttgcc 43363327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 45692950 - 45693031
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||  ||||||||||||||||  ||||||||||||||| || |||||||||| ||||||||    
T  45692950 aaaaacaactcatttaactatgaagttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcc 45693031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 106
Target Start/End: Original strand, 9356708 - 9356795
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaagttt 106  Q
    ||||| |||||||||||| |||||| |||||| ||| | ||| | |||||| |||||||||| |||||||||| |||||||| |||||    
T  9356708 aaaaacaactcatttaactattaatttaaagactgaatttaccaatacactaaaatatattgggtgtaccatagaatttgcctagttt 9356795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 24980267 - 24980346
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||| ||||| |||||| |||||| ||||||||| |||||   |||||||||||||||||| |||||||||| ||||||    
T  24980267 aaaaacaactcttttaactattaatttaaagagtgggtgtatcggtacactcaaatatattgggtgtaccatagaatttg 24980346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 1856882 - 1856800
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| || ||| ||||| ||||||||||  ||||||||||||| | || |||||||||| |||||||||    
T  1856882 aaaaacaactcatttaactatgaatttaaagcgtgagtgtaccggtacactcaaatacagtgggtgtaccatagaatttgcca 1856800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 54996178 - 54996100
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||||||||||  |||||| |||||||||| | ||| ||||||||||||||||||  |||||||||| |||||    
T  54996178 aaaaacaactcatttaattattaatttaaagagtgaatataccagtacactcaaatatattaggtgtaccatagaattt 54996100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 4720569 - 4720488
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| || ||| ||||||||| || |||  ||||||||||||||  || |||||||||| ||||||||    
T  4720569 aaaaataactcatttaactatgaatttaaagagtgggtctaccggtacactcaaatatcgtgggtgtaccatagaatttgcc 4720488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 24535811 - 24535892
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| |||||||||||  |||  ||||||||||||||| || |||||||||| ||||||||    
T  24535811 aaaaacaactcatttaactatgaatttaaagagtgaggctaccggtacactcaaatatagtgggtgtaccatataatttgcc 24535892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 27990865 - 27990946
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| |||||| |||||||||  ||||||||||||||| |  |||||||||| ||||||||    
T  27990865 aaaaacaactcatttaactatgaatttaaagaatgagtgtaccggtacactcaaatatagtaggtgtaccatagaatttgcc 27990946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 32845979 - 32846060
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| ||||||||||   |||||| |||||| |||||| || |||||||||||||||||||  ||||||||| ||||||||    
T  32845979 aaaaacaactcatttatttattaatttaaagaatgagtggaccagtacactcaaatatattggatgtaccatagaatttgcc 32846060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 33491487 - 33491568
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||| |||||| ||||||| | ||||||  ||||||||||||||||||  ||||||||| ||||||||    
T  33491487 aaaaacaacttatttaactattaatttaaagagcgggtgtaccggtacactcaaatatattggatgtaccatagaatttgcc 33491568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 36631360 - 36631420
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatatt 79  Q
    ||||| |||||||||||| |||||| ||||||| |||||||  ||||||||||||||||||    
T  36631360 aaaaacaactcatttaaccattaatttaaagagcgagtgtaacagtacactcaaatatatt 36631420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 38008234 - 38008162
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccata 91  Q
    |||||||||||||||||| ||| || |||| |||||||||||  ||||| |||||||||| | ||||||||||    
T  38008234 aaaaataactcatttaaccattgatttaaaaagtgagtgtaccggtacattcaaatatatcgggtgtaccata 38008162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 3763190 - 3763115
Alignment:
Q  25 aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||| |||||| |||| |||||||||||   ||||||||||||||||   ||||||||| ||||||||    
T  3763190 aactcatttaaccattaatttaaaaagtgagtgtaccgatacactcaaatatattagatgtaccatagaatttgcc 3763115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 54506198 - 54506280
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| || ||| |||||| |||||||||  ||||||||||||||| ||  |||||| || |||||||||    
T  54506198 aaaaacaactcatttaactatgaatttaaagaatgagtgtaccggtacactcaaatatagtggatgtaccgtagaatttgcca 54506280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 12356765 - 12356818
Alignment:
Q  45 taaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||||||||||||||  ||||||||||||||| || |||||||||| ||||||    
T  12356765 taaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaatttg 12356818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 27761726 - 27761807
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||   ||||| |||||| | |||||||  |||||||||||||||||  |||||||||| ||||||||    
T  27761726 aaaaacaactcatttaattgttaatttaaagaataagtgtaccggtacactcaaatatattaggtgtaccatagaatttgcc 27761807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 31998798 - 31998726
Alignment:
Q  30 atttaacaattaatctaaagagtgagtgt--acaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||| |||||| ||||||||| ||||  ||  ||||||||||||||||||| ||||||||| ||||||||    
T  31998798 atttaactattaatttaaagagtgggtgtgtaccggtacactcaaatatattgattgtaccatagaatttgcc 31998726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 43147573 - 43147512
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattg 80  Q
    ||||| |||||||||||| |||||| |||||| || ||||||  ||||||||||||||||||    
T  43147573 aaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattg 43147512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 56302914 - 56302833
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||| ||||||| |||||| ||||  ||| ||||||  || || |||||||||||| |||||||||| ||||||||    
T  56302914 aaaaataacttatttaactattaatttaaatggtgggtgtaccggtgcattcaaatatattgggtgtaccatagaatttgcc 56302833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 32289242 - 32289310
Alignment:
Q  30 atttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||||| |||||| |||||||||||||||| | || |||||||||||||  ||||| |||| ||||||    
T  32289242 atttaactattaatttaaagagtgagtgtaccaataaactcaaatatattaggtgtatcatagaatttg 32289310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 3716405 - 3716323
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||||||||||||||| |||||| ||| || |  |||||| | ||||||||||| |||||  ||||||||| ||||||||||    
T  3716405 aaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaat-tattggatgtaccatagaatttgccaa 3716323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 30342905 - 30342824
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    |||||||||||||||||| |||||| |||||| |  |||||| | |||||||||||   ||| |||||||||| |||||||||    
T  30342905 aaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaat-ggttgggtgtaccatataatttgcca 30342824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 43734934 - 43734860
Alignment:
Q  26 actcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||||||| |||||| |||| | ||  |||||  ||| ||||||||||||||| ||||||||| ||||||||    
T  43734934 actcatttaactattaatttaaataatggatgtaccggtaaactcaaatatattgaatgtaccatataatttgcc 43734860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 100
Target Start/End: Complemental strand, 43735205 - 43735131
Alignment:
Q  26 actcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||||||| |||||| |||| | ||  |||||  ||| ||||||||||||||| ||||||||| ||||||||    
T  43735205 actcatttaactattaatttaaataatggatgtaccggtaaactcaaatatattgaatgtaccatataatttgcc 43735131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 14802792 - 14802712
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| ||| || |  |||||  | ||||||||||| | |||||||||||||| ||||||||    
T  14802792 aaaaataactcatttaactattaatttaaggatttggtgtatcaatacactcaaat-tgttgagtgtaccatagaatttgcc 14802712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 29582047 - 29581967
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| ||||||||||   |||||| ||||||  ||||||||  ||||||||||||||||||  ||||||||| ||||||||    
T  29582047 aaaaacaactcatttagttattaatttaaagaaggagtgtacc-gtacactcaaatatattggatgtaccatagaatttgcc 29581967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 34828803 - 34828722
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| ||||||||||||  ||||| |||||| || || |||  || ||||||||||||||| ||||| |||| ||||||||    
T  34828803 aaaaacaactcatttaactgttaatttaaagaatgggtataccggtgcactcaaatatattgggtgtatcatagaatttgcc 34828722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 49286979 - 49287015
Alignment:
Q  63 gtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||| |||||||||||||||||||||||||    
T  49286979 gtacactcaaat-tattgagtgtaccataaaatttgcc 49287015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 50732942 - 50732861
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| | || |||||||||||   |||||||||||||| ||  ||||||||| ||||||||    
T  50732942 aaaaacaactcatttaactatgaatttcaaaagtgagtgtaccgatacactcaaatatagtggatgtaccatagaatttgcc 50732861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 50775855 - 50775774
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| |||||| ||| |||||  |||||| ||||||||||  ||||| |||  ||||||||    
T  50775855 aaaaacaactcatttaaccattaatttaaagaatgaatgtaccggtacacccaaatatattatgtgtatcatggaatttgcc 50775774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 53389173 - 53389253
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| |||||| | |||||||   |||||||||||   |||| ||||||||| ||||||||    
T  53389173 aaaaataactcatttaactattaatttaaagatttagtgtaccgatacactcaaattgtttga-tgtaccatagaatttgcc 53389253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 101 - 166
Target Start/End: Original strand, 33414590 - 33414656
Alignment:
Q  101 aagtttttatccttctatttaattagatttctt-aagttatcaatgttagatactttcgtgtcttaa 166  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  33414590 aagtttttatccttctatttaattagatttcttaaagttatcaatgttagatactttcgtgtcttaa 33414656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 2749630 - 2749713
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||| |||||||||||| |||||| |||||||||  |||||| |||||||||||||||||| |||||||||| ||||||||    
T  2749630 tcaaaaacaactcatttaaccattaatttaaagagtggatgtacaggtacactcaaatatattgggtgtaccatagaatttgcc 2749713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 29454535 - 29454616
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||| ||||||| |||||| ||||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  29454535 aaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 29454616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 2261110 - 2261028
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||| ||||||  |||||| ||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||||    
T  2261110 aaaaacaacttatttaattattaatttaaagagtgggtgtaccggtacactcaaatatattgagtgtaccatagaatttgcca 2261028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 117890 - 117809
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| ||||||||||||||||  ||||||||||||||| || |||||||||| ||||||||    
T  117890 aaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcc 117809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 26522292 - 26522373
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| ||||||||||||||||  ||||||||||||||| || |||||||||| ||||||||    
T  26522292 aaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatataatttgcc 26522373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 36667314 - 36667233
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| || ||| ||||||||||||||||  ||||||||||||||| ||  ||||||||| ||||||||    
T  36667314 aaaaataactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatataatggatgtaccatataatttgcc 36667233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 37676263 - 37676344
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| ||||||||||||||||  ||||||||||||||| || |||||||||| ||||||||    
T  37676263 aaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcc 37676344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 44542139 - 44542220
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| || ||||||||| |||||| |||||||||||| ||  | |||||||||||||||||| ||||||||||||||||||    
T  44542139 aaaaacaattcatttaactattaatttaaagagtgagtatatcaatacactcaaatatattgaatgtaccataaaatttgcc 44542220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 1043139 - 1043060
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||||| ||||||| |||||| ||||||||| ||||||   ||||||||||||||||| |||||||||| ||||||    
T  1043139 aaaaataacttatttaactattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccatagaatttg 1043060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 34633944 - 34633865
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||| |||||||||||| |||||| ||||||||||||||||   ||||||||||||||||| ||||| |||| ||||||    
T  34633944 aaaaacaactcatttaactattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtatcatagaatttg 34633865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 4214821 - 4214902
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||| | ||||||| |||||| ||||||||| || |||  |||||||||||||||||| |||||||||| ||||||||    
T  4214821 aaaaataatttatttaactattaatttaaagagtgggtataccggtacactcaaatatattgggtgtaccatagaatttgcc 4214902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 39300414 - 39300495
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| |||||||||  ||||  |||||| |||||||||||| |||||||||| ||||||||    
T  39300414 aaaaacaactcatttaactattaatttaaagagtggatgtagcagtacattcaaatatattgggtgtaccatagaatttgcc 39300495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 40267558 - 40267479
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||| |||||||||||| || ||| ||||||||| ||||||  ||||||||||||||| || |||||||||| ||||||    
T  40267558 aaaaacaactcatttaactatgaatttaaagagtgggtgtaccggtacactcaaatatagtgggtgtaccatagaatttg 40267479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 9497619 - 9497537
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| ||| |||||||| |||||| |||||| ||| |||||  ||||| ||||||||||||| ||||||||| |||||||||    
T  9497619 aaaaacaacccatttaactattaatttaaagaatgaatgtaccggtacattcaaatatattgaatgtaccatagaatttgcca 9497537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 29265921 - 29265999
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||||||| |||||||| |||||| ||||||||| || |||   ||||||||||||||||| |||||||||| |||||    
T  29265921 aaaaataacacatttaactattaatttaaagagtgggtatactgatacactcaaatatattgggtgtaccatataattt 29265999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 6631231 - 6631312
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||| |||||| |||||| || || |||  |||||||||||||||||| |||||||||| ||||||||    
T  6631231 aaaaacaactaatttaactattaatttaaagaatgggtataccggtacactcaaatatattgggtgtaccatagaatttgcc 6631312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 26988719 - 26988792
Alignment:
Q  25 aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||| ||||||| |||||| |||||| |||||||||   ||||||||||||||||| |||||||||| ||||||    
T  26988719 aacttatttaactattaatttaaagaatgagtgtaccgatacactcaaatatattgggtgtaccatataatttg 26988792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 36162271 - 36162190
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| ||| |||||||| |||||| |||||||||  |||||  |||||||||||||||||| |||||| ||| ||||||||    
T  36162271 aaaaacaacacatttaactattaatttaaagagtggatgtactggtacactcaaatatattgggtgtactatagaatttgcc 36162190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 38329773 - 38329836
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattg 80  Q
    ||||||| |||||||||||| |||||| |||||||| | |||||  ||||||||||||||||||    
T  38329773 tcaaaaacaactcatttaactattaatttaaagagtaaatgtaccggtacactcaaatatattg 38329836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 27847590 - 27847512
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||||||||||| || ||| |||||||||||||||   ||||||||||||||| |  |||||||||| |||||    
T  27847590 aaaaacaactcatttaactatgaatttaaagagtgagtgtatcggtacactcaaatatagtaggtgtaccatagaattt 27847512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 40578774 - 40578696
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    |||||||||||||||||| || ||| |||||||||||| ||| | |||||| ||||||| ||  ||||||||| |||||    
T  40578774 aaaaataactcatttaactatgaatttaaagagtgagtataccaatacacttaaatatagtggatgtaccatagaattt 40578696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 40776944 - 40777022
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||| ||||||| |||||| |||| ||||| ||||| | ||||||||||||| ||| |||||||||| |||||    
T  40776944 aaaaacaacttatttaactattaatttaaaaagtgaatgtacgaatacactcaaatattttgggtgtaccatagaattt 40777022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 41720328 - 41720250
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||||||||||| || ||| ||||||||| ||||||   |||||||||||||| || |||||||||| |||||    
T  41720328 aaaaacaactcatttaactatgaatttaaagagtgggtgtaccgatacactcaaatatagtgggtgtaccatagaattt 41720250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 43842178 - 43842251
Alignment:
Q  28 tcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    |||||||| ||||||| |||||| ||||||||   |||||||||||||||||   ||||||||| |||||||||    
T  43842178 tcatttaataattaatttaaagaatgagtgtaacggtacactcaaatatattagatgtaccatataatttgcca 43842251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 98
Target Start/End: Complemental strand, 5328495 - 5328451
Alignment:
Q  54 agtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||||| |||||||||||||||| ||||||||||||| ||||||    
T  5328495 agtgtactagtacactcaaatatagtgagtgtaccatataatttg 5328451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 28090272 - 28090190
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||||||||||||||| |||||| ||| || |  |||||| | || |||||||| ||||| |||||||||| ||||||||||    
T  28090272 aaaaataactcatttaactattaatttaaggatttggtgtaccaatatactcaaat-tattgggtgtaccatagaatttgccaa 28090190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 101
Target Start/End: Original strand, 5215692 - 5215728
Alignment:
Q  64 tacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    |||||||||| |||||||||||||||||||||||||||    
T  5215692 tacactcaaa-atattgagtgtaccataaaatttgcca 5215728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 23870630 - 23870666
Alignment:
Q  63 gtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||| |||||||||||||||||||||||    
T  23870630 gtacactcaaatat-ttgagtgtaccataaaatttgcc 23870666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 26439849 - 26439934
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaagt 104  Q
    ||||||||| |||||||| |||||| |   || || |||||| | | ||||||||| | |||||||||||||| ||||||||||||    
T  26439849 aaaaataacacatttaactattaatttgttgattgggtgtaccaatgcactcaaattttttgagtgtaccatagaatttgccaagt 26439934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 34166236 - 34166317
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtac--cataaaatttgcc 100  Q
    ||||| |||||||||||  |||||| ||||||||  |||||| | ||||||||||||||| || |||||  |||||||||||||    
T  34166236 aaaaacaactcatttaattattaatttaaagagt--gtgtaccaatacactcaaatatatcgaatgtactacataaaatttgcc 34166317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 37511168 - 37511088
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| |||||| |  |||||| | ||||||||||| | ||| |||||||||  ||||||||    
T  37511168 aaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaat-tgttgggtgtaccatcgaatttgcc 37511088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 1e-24; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 25702783 - 25702864
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||| ||||| ||| ||||||||    
T  25702783 aaaaataactcatttaactattaatctaaagagtgagtgtaccggtacactcaaatatattgaatgtactatagaatttgcc 25702864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 17554143 - 17554224
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| ||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||    
T  17554143 aaaaacaactcatttaaccattaatttaaagagtgagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 17554224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 48977202 - 48977284
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||| ||||||| |||||| ||||||||| ||||||  ||||||||||||||||||||||||||||| |||||||||    
T  48977202 aaaaacaacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgagtgtaccatagaatttgcca 48977284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 477760 - 477841
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| ||||||||||||||||   ||||||||||||||||| |||||||||| ||||||||    
T  477760 aaaaacaactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 477841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 14153008 - 14153089
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| ||||| |||||| |||||| |||| |||| ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  14153008 aaaaacaactcttttaactattaatttaaaaagtgggtgtacatgtacactcaaatatattgagtgtaccatagaatttgcc 14153089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 24381397 - 24381316
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||  |||||||||||| ||||  |||||||||| ||||||||    
T  24381397 aaaaataactcatttaactattaatttaaagagtgagtgtaccggtacactcaaatctattaggtgtaccatagaatttgcc 24381316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 35874264 - 35874345
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||| |||||| |||||||||||||||| | ||||||||||||||||| |||||||||| ||||||||    
T  35874264 aaaaacaacttatttaactattaatttaaagagtgagtgtaccaatacactcaaatatattgggtgtaccatagaatttgcc 35874345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 6526754 - 6526837
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    ||||| |||||||||||| |||||| ||| |||||||||||   |||||||||||||||||| |||||||||| ||||||||||    
T  6526754 aaaaacaactcatttaactattaatttaaggagtgagtgtatcggtacactcaaatatattgggtgtaccatagaatttgccaa 6526837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 34038490 - 34038571
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| |||| ||||||||||| | |||||||||||||||||  ||||||||| ||||||||    
T  34038490 aaaaacaactcatttaactattaatttaaaaagtgagtgtaccaatacactcaaatatattggatgtaccatagaatttgcc 34038571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 38717835 - 38717754
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| |||||||| ||||||| |||||||||||||||| || |||||||||| ||||||||    
T  38717835 aaaaacaactcatttaactatgaatttaaagagttagtgtactagtacactcaaatatagtgggtgtaccatagaatttgcc 38717754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 44263727 - 44263646
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| ||||||| |||||||  | ||||||||||||||||| |||||||||| ||||||||    
T  44263727 aaaaacaactcatttaactattaatttaaagagcgagtgtatcaatacactcaaatatattgggtgtaccatagaatttgcc 44263646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 46234903 - 46234831
Alignment:
Q  25 aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    |||||||||||| |||||| |||||||||||||||   |||||||||||||||||| |||||||||| |||||    
T  46234903 aactcatttaaccattaatttaaagagtgagtgtatcggtacactcaaatatattgggtgtaccatagaattt 46234831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 2249892 - 2249975
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||||||||||||||| || ||| |||||||||||| ||| | |||||||||||||| ||  ||||||||| ||||||||||    
T  2249892 aaaaataactcatttaactatgaatttaaagagtgagtataccaatacactcaaatatagtggatgtaccatagaatttgccaa 2249975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 31075936 - 31076019
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||||||||||||||  |||||| ||| || || ||||||  |||||||||||||||||| |||||||||| ||||||||||    
T  31075936 aaaaataactcatttaattattaatttaatgaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgccaa 31076019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 31530637 - 31530719
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatata--ttgagtgtaccataaaatttgc 99  Q
    ||||||||||| |||||| |||||| ||||||||||||||||   ||||||||||||||  ||| ||||||||||||||||||    
T  31530637 aaaaataactcttttaactattaatttaaagagtgagtgtaccgttacactcaaatatattttgggtgtaccataaaatttgc 31530719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 51787794 - 51787877
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    ||||| |||||||||||| |||||| |||||| || ||||||  ||||||||||||||||||  ||||||||| ||||||||||    
T  51787794 aaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattggatgtaccatagaatttgccaa 51787877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 12105485 - 12105567
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| ||||| |||||| |||||| ||||||||| |||||   |||||||||||||||||| |||||||||| |||||||||    
T  12105485 aaaaacaactcttttaactattaatttaaagagtgggtgtattggtacactcaaatatattgggtgtaccatagaatttgcca 12105567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 52345927 - 52346005
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||||||||||| |||||| ||||||||| ||||||  |||||||||||||||||| |||||| ||| |||||    
T  52345927 aaaaacaactcatttaactattaatttaaagagtgggtgtactggtacactcaaatatattgggtgtacaatagaattt 52346005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 6966013 - 6965932
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||  |||||||| ||||||| |||||||||||||||| || |||||||||| ||||||||    
T  6966013 aaaaacaactcatttaactatgaaattaaagagttagtgtactagtacactcaaatatagtgggtgtaccatagaatttgcc 6965932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 32710070 - 32710151
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| ||| || |||| |||||||||||  ||||||||||||||||||  ||||||||| ||||||||    
T  32710070 aaaaacaactcatttaaccattgatttaaaaagtgagtgtaccggtacactcaaatatattggatgtaccatagaatttgcc 32710151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 45622810 - 45622891
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||| ||||||| || ||| ||||||||||||||||  ||||||||||||||| ||  ||||||||| ||||||||    
T  45622810 aaaaataacttatttaactatgaatttaaagagtgagtgtactggtacactcaaatatagtggatgtaccatagaatttgcc 45622891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 47544376 - 47544295
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| ||||||||||||||||   |||||||||||||| || |||||||||| ||||||||    
T  47544376 aaaaacaactcatttaactatgaatttaaagagtgagtgtaccgttacactcaaatatagtgggtgtaccatagaatttgcc 47544295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 51056277 - 51056197
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||| ||||||| |||||| ||||||||| ||||||  |||||||||||||||||  |||||||||| ||||||||    
T  51056277 aaaaataacttatttaactattaatttaaagagtg-gtgtaccggtacactcaaatatattaggtgtaccatagaatttgcc 51056197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 42275662 - 42275742
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgc 99  Q
    ||||| |||||||||||| |||||| |||| | ||||| ||| | |||||||||||||||||  |||||||||||||||||    
T  42275662 aaaaacaactcatttaactattaatttaaaaaatgagtataccaatacactcaaatatattggatgtaccataaaatttgc 42275742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 52861623 - 52861706
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    ||||| || ||||||||| || ||| ||||||||||||||||  ||||||||||||||| || ||||||||||  |||||||||    
T  52861623 aaaaacaattcatttaactataaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccataggatttgccaa 52861706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 6329571 - 6329648
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||||||||||| || ||| |||||||||| ||||| |||||||||||||||||||  |||||| ||||||||    
T  6329571 aaaaacaactcatttaactat-aatttaaagagtgaatgtactagtacactcaaatatattggatgtaccctaaaattt 6329648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 32 - 98
Target Start/End: Original strand, 46362359 - 46362425
Alignment:
Q  32 ttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||| |||||| |||||| || |||||| |||||||||||||||||||  ||||||||||||||||    
T  46362359 ttaaccattaatttaaagaatgggtgtactagtacactcaaatatattggatgtaccataaaatttg 46362425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 8396438 - 8396357
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| |||||||||| |||||  ||||||||||||||| |||||||||  || ||||||||    
T  8396438 aaaaagaactcatttaactatgaatttaaagagtgaatgtaccggtacactcaaatatagtgagtgtactgtagaatttgcc 8396357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 38260883 - 38260802
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||| |||||| ||||||||| ||||||  |||||||||||||||||   ||||||||| ||||||||    
T  38260883 aaaaacaacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattagatgtaccatagaatttgcc 38260802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 47693287 - 47693206
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| ||||| |||||| |||||| |||||||||  ||||   |||||||||||||||||| |||||||||| ||||||||    
T  47693287 aaaaacaactcttttaactattaatttaaagagtggatgtatcggtacactcaaatatattgggtgtaccatagaatttgcc 47693206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 100
Target Start/End: Complemental strand, 48760198 - 48760125
Alignment:
Q  27 ctcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||| || ||| |||||||| ||||||| | |||||||||||||| || |||||||||| ||||||||    
T  48760198 ctcatttaactatgaatttaaagagttagtgtactaatacactcaaatatagtgggtgtaccatagaatttgcc 48760125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 52180315 - 52180234
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||| |||||| |||| |||| ||||||  |||||||||||||||||   ||||||||||||||||||    
T  52180315 aaaaacaacttatttaactattaatttaaatagtgggtgtaccggtacactcaaatatattagatgtaccataaaatttgcc 52180234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 30263908 - 30263987
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||| |||||||||||| |||||| |||||| |  |||||   |||||||||||||||||| |||||||||| ||||||    
T  30263908 aaaaacaactcatttaactattaatttaaagaattggtgtatgggtacactcaaatatattgggtgtaccatagaatttg 30263987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 18641968 - 18641887
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    |||||||||||||||||| |||||| ||| || | ||||||| | ||||||||||| | |||||||||||||| || ||||||    
T  18641968 aaaaataactcatttaactattaatttaaggatttagtgtaccaatacactcaaat-tgttgagtgtaccatagaacttgcca 18641887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 30321217 - 30321299
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| || ||   ||||||||||| |||  ||||||||||||||| || |||||||||| |||||||||    
T  30321217 aaaaacaactcatttaactatgaagtaaaagagtgagtataccggtacactcaaatataatgggtgtaccatagaatttgcca 30321299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 7489246 - 7489315
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgta 86  Q
    ||||||||||||| || ||| |||||| ||||||||| |||||   |||||||||||||||||| |||||    
T  7489246 tcaaaaataactctttcaactattaatttaaagagtgggtgtatcggtacactcaaatatattgggtgta 7489315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 10348352 - 10348432
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| ||| ||||||||||||  ||||||||||||||| || |||| ||||| ||||||||    
T  10348352 aaaaacaactcatttaactatgaatttaa-gagtgagtgtaccggtacactcaaatatagtgggtgtcccatagaatttgcc 10348432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 24003746 - 24003827
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| |||| | |||||||||  ||||||||||||||| ||  ||||||||| ||||||||    
T  24003746 aaaaacaactcatttaactatgaatttaaataatgagtgtaccggtacactcaaatatagtggatgtaccatagaatttgcc 24003827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 27295138 - 27295058
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| |||||| |  |||||| | ||||||||||| | ||| |||||||||| ||||||||    
T  27295138 aaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaat-tgttgggtgtaccatagaatttgcc 27295058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 44382386 - 44382426
Alignment:
Q  63 gtacactcaaatatattgagtgtaccataaaatttgccaag 103  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  44382386 gtacactcaaatatgttgggtgtaccataaaatttgccaag 44382426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 48616771 - 48616854
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||||||||| |||||||| |||||| ||  || || |||||| | ||||||||||| | |||||||||||||| |||||||||    
T  48616771 tcaaaaataacacatttaactattaatttattgattgggtgtaccaatacactcaaat-ttttgagtgtaccatagaatttgcca 48616854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 51985014 - 51984936
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||||||||||||| |||||| ||| || |   ||||| | ||||||||||| |||||||||||||||| ||||||    
T  51985014 aaaaataactcatttaactattaatttaaggatttgatgtaccaatacactcaaat-tattgagtgtaccatagaatttg 51984936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 51781430 - 51781507
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    |||||||||||||||||| |||||| ||| || |  |||||| | ||||||||||| ||||| |||||||||| |||||    
T  51781430 aaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaat-tattgggtgtaccatagaattt 51781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 922168 - 922248
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| ||| || |  |||||| | ||||||||||| | ||| |||||||||| ||||||||    
T  922168 aaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaat-tgttgggtgtaccatagaatttgcc 922248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 100
Target Start/End: Original strand, 7489319 - 7489356
Alignment:
Q  63 gtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  7489319 gtacactcaaatatattgggtgtaccatagaatttgcc 7489356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 12907360 - 12907279
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| |||| |||||||||||  |||||||| |||||| ||  | ||||||| ||||||||    
T  12907360 aaaaacaactcatttaactatgaatttaaatagtgagtgtaccggtacactcgaatatagtggatataccatagaatttgcc 12907279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 13203243 - 13203324
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| |||||||| |||||||  ||||||||||||| | || ||||||  || ||||||||    
T  13203243 aaaaacaactcatttaactatgaatttaaagagtaagtgtaccggtacactcaaatacagtgggtgtactgtagaatttgcc 13203324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 16482656 - 16482576
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| ||| || |  |||||| | |||||| |||| ||||| |||||||||| ||||||||    
T  16482656 aaaaataactcatttaactattaatttaaggatttggtgtaccaatacacttaaat-tattgggtgtaccatagaatttgcc 16482576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 32805816 - 32805735
Alignment:
Q  17 tcaaaaat-aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    |||||||| ||||||||||||  | ||| |||||||||||||||| | |||||| ||||||| ||  ||||||||| |||||    
T  32805816 tcaaaaatcaactcatttaactttgaatttaaagagtgagtgtaccaatacacttaaatatagtggatgtaccatagaattt 32805735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 3399231 - 3399148
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtg--agtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| || ||||||||| |||||| |||||||||  ||| |||  | |||||||||||||||  |||||||||| ||||||||    
T  3399231 aaaaacaattcatttaactattaatttaaagagtggtagtataccggcacactcaaatatattaggtgtaccatagaatttgcc 3399148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 7227882 - 7227947
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagag----tgagtgtacaagtacactcaaatatattg 80  Q
    |||||||||||||||||| |||||| |||||||    | |||||||  ||||||||||||||||||    
T  7227882 aaaaataactcatttaaccattaatttaaagagtaattaagtgtaccggtacactcaaatatattg 7227947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 30891359 - 30891276
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    ||||| |||||||||||| |||||| |||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||||    
T  30891359 aaaaacaactcatttaaccattaatttaaagagtgagtgtaccagtacactcaaatatattggatgtaccatagaatttgccaa 30891276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 5583187 - 5583270
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||| |||||||||||| |||||| |||||||||||| |||  |||||||||||||||||| |||||||||| ||||||||    
T  5583187 tcaaaaacaactcatttaactattaatttaaagagtgagtttaccggtacactcaaatatattgggtgtaccatagaatttgcc 5583270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 24812160 - 24812077
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    ||||| |||||||||||| || ||| ||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||||||    
T  24812160 aaaaacaactcatttaactataaatttaaagagtgagtgtaccggtacactcaaatatagtgagtgtaccatagaatttgccaa 24812077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 6791763 - 6791844
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| ||||||||||||||||   ||||||||||||||||| |||||||||| ||||||||    
T  6791763 aaaaacaactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 6791844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 35357782 - 35357701
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| ||||||||||||||||  ||||||||||||||||||  ||||||||| ||||||||    
T  35357782 aaaaacaactcatttaaccattaatttaaagagtgagtgtaccggtacactcaaatatattggatgtaccatagaatttgcc 35357701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 41968748 - 41968829
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||   ||||||||||||||||  |||||||||| ||||||||    
T  41968748 aaaaataactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattaggtgtaccatagaatttgcc 41968829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 30076740 - 30076658
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| || ||| |||||||| ||||||| |||||||||||||||| || |||||||||| |||||||||    
T  30076740 aaaaaaaactcatttaactatgaatttaaagagttagtgtactagtacactcaaatatagtgggtgtaccatagaatttgcca 30076658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 24953254 - 24953335
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| ||||||||||||||||  ||||||||||||||| || |||||||||| ||||||||    
T  24953254 aaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcc 24953335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 28265079 - 28265160
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| || ||| ||||||||||||||||  || |||||||||||| || |||||||||| ||||||||    
T  28265079 aaaaataactcatttaactatgaatttaaagagtgagtgtaccggtgcactcaaatatagtgggtgtaccatagaatttgcc 28265160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 35291652 - 35291733
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| ||||||||||||||||  |||||||||||||||||| ||||  |||| ||||||||    
T  35291652 aaaaacaactcatttaaccattaatttaaagagtgagtgtaccggtacactcaaatatattgggtgtgtcatagaatttgcc 35291733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 47642578 - 47642497
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| || ||||||||| || ||| ||||||||||||||||  ||||||||||||||| || |||||||||||||||||||    
T  47642578 aaaaacaattcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatataatgggtgtaccataaaatttgcc 47642497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 1806562 - 1806484
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||| ||||||| |||||| ||||||||  ||||||  ||||||||||||||||||||||||||||| |||||    
T  1806562 aaaaacaacttatttaactattaatttaaagagtaggtgtaccggtacactcaaatatattgagtgtaccatagaattt 1806484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 18519995 - 18519913
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| || ||| ||||||||||||||||  ||||||||||||||| ||  ||||||||| |||||||||    
T  18519995 aaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtggatgtaccatagaatttgcca 18519913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 23110756 - 23110834
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||||||||||| || ||| ||||||||||||||||  ||||||||||||||| ||  |||||||||||||||    
T  23110756 aaaaacaactcatttaactataaatttaaagagtgagtgtaccggtacactcaaatatagtggatgtaccataaaattt 23110834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 45232373 - 45232447
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccata 91  Q
    ||||||| |||||||||||| |||||  |||||| || |||||| ||||||||||||||||||| ||||||||||    
T  45232373 tcaaaaaaaactcatttaactattaaattaaagaatgggtgtaccagtacactcaaatatattgggtgtaccata 45232447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 46291425 - 46291503
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| || ||||||||| |||||| ||||||||| ||||||  |||||||||||||||||| |||||||||| |||||    
T  46291425 aaaaacaattcatttaactattaatttaaagagtgcgtgtaccggtacactcaaatatattgggtgtaccatataattt 46291503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 11750747 - 11750828
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| |||||||||||||||| |||||||||||||| | || ||||| |||| ||||||||    
T  11750747 aaaaacaactcatttaactataaatttaaagagtgagtgtaccagtacactcaaatagagtgggtgtatcatataatttgcc 11750828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 15715985 - 15715904
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| ||||||||| ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  15715985 aaaaacaactcatttaactatgaatttaaagagtgggtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcc 15715904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 47369545 - 47369626
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||| || ||| |||||||||||||||   |||||||||||||||||| |||||||||| ||||||||    
T  47369545 aaaaacaacttatttaactatgaatttaaagagtgagtgtatcggtacactcaaatatattgggtgtaccatagaatttgcc 47369626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 17306923 - 17307006
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||| |||||||||||| |||||| |||||| | ||| |||   ||||||||||||||||  |||||||||||||||||||    
T  17306923 tcaaaaacaactcatttaactattaatttaaagaataagtataccgatacactcaaatatattaggtgtaccataaaatttgcc 17307006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 26605380 - 26605462
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| ||||| |||||| |||||| ||||||||| || ||   |||||||||||||||||| |||||||||| |||||||||    
T  26605380 aaaaacaactcttttaactattaatttaaagagtgggtatattggtacactcaaatatattgggtgtaccatagaatttgcca 26605462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 40941955 - 40941877
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||||||||||||| |||||| |||||| |  |||||| | ||||||||||| | |||||||||||||| ||||||    
T  40941955 aaaaataactcatttaactattaatttaaagattttgtgtaccaatacactcaaat-tgttgagtgtaccatagaatttg 40941877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 54 - 100
Target Start/End: Original strand, 41771769 - 41771815
Alignment:
Q  54 agtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||  |||||||||||||||||| |||||||||||||||||||    
T  41771769 agtgtaccggtacactcaaatatattgggtgtaccataaaatttgcc 41771815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 36533399 - 36533452
Alignment:
Q  45 taaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||| |||||||||  |||||||||||||||||| |||||||||| ||||||    
T  36533399 taaagaatgagtgtaccggtacactcaaatatattgggtgtaccatataatttg 36533452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 3910008 - 3909926
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||||||||||||||| |||||| |||| | |  |||||| | ||||||||||| | ||| |||||||||| ||||||||||    
T  3910008 aaaaataactcatttaactattaatttaaaaattcggtgtaccaatacactcaaat-tgttgggtgtaccatagaatttgccaa 3909926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 15954212 - 15954133
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||| |||||||||||| ||| || |||| | ||||| |||  ||||||||||||||||||  ||||||||| ||||||    
T  15954212 aaaaacaactcatttaaccattgatttaaataatgagtataccggtacactcaaatatattggatgtaccatagaatttg 15954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 77
Target Start/End: Complemental strand, 38665969 - 38665911
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatata 77  Q
    ||||| |||||||||||| || ||| |||||||| |||||||  |||||||||||||||    
T  38665969 aaaaacaactcatttaaccatgaatttaaagagtaagtgtaccggtacactcaaatata 38665911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 6855174 - 6855137
Alignment:
Q  63 gtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  6855174 gtacacgcaaatatattgagtgtaccatagaatttgcc 6855137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 15584865 - 15584945
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| ||| || | |||||||   ||||||||||||| ||| |||||||||||||||||||    
T  15584865 aaaaaaaactcatttaactataaatttaaggatttagtgtacgt-tacactcaaatatgttgcgtgtaccataaaatttgcc 15584945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 23608317 - 23608398
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||| | || ||  ||||| || ||||||| ||||||||||||||| ||| ||||||| || ||||||||    
T  23608317 aaaaacaactcatttatctataaaattaaagggttagtgtaccagtacactcaaatatgttgggtgtaccgtagaatttgcc 23608398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 30624049 - 30624129
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| |||| | |  |||||| | ||||||||||| ||||| |||||||||| || |||||    
T  30624049 aaaaataactcatttaactattaatttaaaaatttggtgtaccaatacactcaaat-tattgggtgtaccatagaacttgcc 30624129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 8549880 - 8549963
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||||||||||||||| |||||| ||||||||||||||||   ||||||||||||||||| |||||||||| ||||||||||    
T  8549880 aaaaataactcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgccaa 8549963  T

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Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 4509511 - 4509428
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||||||| ||||||| |||||| ||||||||| ||||||  |||||||||||||||||  |||||||||| ||||||||||    
T  4509511 aaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattaggtgtaccatagaatttgccaa 4509428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 9686851 - 9686776
Alignment:
Q  25 aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||||||||  ||||| ||||||||||||||||   |||||||||||||||||||||||||||| ||||||||    
T  9686851 aactcatttaaccgttaatttaaagagtgagtgtactgatacactcaaatatattgagtgtaccatagaatttgcc 9686776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 9661833 - 9661751
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| |||||| |||||| || ||||||  |||||||||||||||||| |||||||||| |||||||||    
T  9661833 aaaaacaactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcca 9661751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 14778993 - 14778911
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaa---atatattgagtgtaccataaaatttg 98  Q
    ||||| |||||||||||| |||||| ||||||||||||||||  ||||||||||   |||||||| |||||||||||||||||    
T  14778993 aaaaacaactcatttaaccattaatttaaagagtgagtgtaccggtacactcaatatatatattgggtgtaccataaaatttg 14778911  T

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Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 1244896 - 1244815
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| ||||||||||||||||  ||||||||||||||| ||  ||||||||| ||||||||    
T  1244896 aaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtggatgtaccatagaatttgcc 1244815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 529122 - 529202
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgc 99  Q
    |||||||||||||||||| ||||||||||||||| | |||||  ||| ||||||||||||||  | ||||||| |||||||    
T  529122 aaaaataactcatttaactattaatctaaagagtaaatgtactggtagactcaaatatattggatataccatacaatttgc 529202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 4576466 - 4576386
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgc 99  Q
    ||||| |||||||||||| |||||| |||||||| |||||||  ||||| ||||||||||||  ||||||||| |||||||    
T  4576466 aaaaacaactcatttaaccattaatttaaagagtaagtgtaccggtacattcaaatatattggctgtaccatagaatttgc 4576386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 33574496 - 33574579
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    ||||| |||||||||||| || ||| |||||||||||||| |   |||||||||||||| || |||||||||| ||||||||||    
T  33574496 aaaaacaactcatttaactatgaatttaaagagtgagtgtgccgatacactcaaatatagtgggtgtaccatagaatttgccaa 33574579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 23416575 - 23416493
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||| | || ||| ||||| ||||||||||  ||||||||||||||| || |||||||||| |||||||||    
T  23416575 aaaaacaactcatttagctatgaatttaaagtgtgagtgtactggtacactcaaatatagtgggtgtaccatagaatttgcca 23416493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 243212 - 243293
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| |||||| || ||||||  || |||||||||||||||  ||||||||| ||||||||    
T  243212 aaaaacaactcatttaactattaatttaaagaatgtgtgtaccggtgcactcaaatatattggatgtaccatataatttgcc 243293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 3141365 - 3141446
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||| || ||| ||||||||||||||||  ||||||||||||||| |  |||||||||| ||||||||    
T  3141365 aaaaacaacttatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtaggtgtaccatagaatttgcc 3141446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Original strand, 8310190 - 8310271
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||||| |||||||||||| |||||| |||||| ||||||||   ||||||||||||||||| | | ||||||| ||||||    
T  8310190 tcaaaaacaactcatttaactattaatttaaagaatgagtgtatcggtacactcaaatatattaaatataccatagaatttg 8310271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 22755322 - 22755241
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| ||||||||||   |||||| ||||||  ||||||||  |||||||||||||||||| ||||| |||| ||||||||    
T  22755322 aaaaacaactcatttagttattaatttaaagaaggagtgtaccggtacactcaaatatattgggtgtatcatagaatttgcc 22755241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 2258983 - 2258905
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||||||||||||| |||||| ||| || | ||||||| | ||||||||||| | ||| |||||||||| ||||||    
T  2258983 aaaaataactcatttaactattaatttaaggatttagtgtaccaatacactcaaat-tgttgggtgtaccatagaatttg 2258905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 33574079 - 33573998
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||| ||||||| |||||| ||||||||  ||||||  ||| |||||||||||| || ||||||||| |||||||||    
T  33574079 aaaaaaaacttatttaactattaatttaaagagtaggtgtaccggtatactcaaatatatgga-tgtaccatataatttgcca 33573998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 1096301 - 1096221
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| |||||| | ||||||| | |||| | ||| |||||| |||||||||| || |||||    
T  1096301 aaaaataactcatttaactattaatttaaagatttagtgtaccaatacaat-aaaaatattgggtgtaccatagaacttgcc 1096221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 2564801 - 2564764
Alignment:
Q  64 tacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  2564801 tacactcaaatatattgaatgtaccatagaatttgcca 2564764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 13719192 - 13719112
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgc 99  Q
    |||||||||||||||||| || ||| ||| ||   |||||||  |||||||||||||| ||| ||||||| || |||||||    
T  13719192 aaaaataactcatttaactataaatttaaggatctagtgtaccggtacactcaaatatgttgggtgtaccgtagaatttgc 13719112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 3e-22; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 42622175 - 42622256
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||| ||||||| |||||| ||||||||| ||||||  |||||||||||||||||| |||||||||||||||||||    
T  42622175 aaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccataaaatttgcc 42622256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 44522104 - 44522023
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| |||||||||| ||||| | |||||||||||||||||| ||||||||| ||||||||    
T  44522104 aaaaataactcatttaactattaatttaaagagtgaatgtaccaatacactcaaatatattgaatgtaccatagaatttgcc 44522023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 46671418 - 46671336
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| |||||| ||||||||||||||||  |||||||||||||||||| ||||||| || |||||||||    
T  46671418 aaaaacaactcatttaactattaatttaaagagtgagtgtaccggtacactcaaatatattgggtgtaccgtataatttgcca 46671336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 29491744 - 29491663
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||| ||||||| |||||| ||||||||| ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  29491744 aaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 29491663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 36098952 - 36098875
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||||||||||||| |||||| ||||||||| |||||   |||||||||||||||||| |||||||||||||||||    
T  36098952 aaaaataactcatttaactattaatttaaagagtgggtgtag--gtacactcaaatatattgggtgtaccataaaatttg 36098875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 40021162 - 40021078
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||||| |||||||||||| |||||| |||||||||  ||||| |||||||||||||||||||  ||||||||| |||||||||    
T  40021162 tcaaaaacaactcatttaactattaatttaaagagtggatgtaccagtacactcaaatatattggatgtaccatagaatttgcca 40021078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 40477838 - 40477759
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||||| ||||||| |||||| ||||||||| ||||||  |||||||||||||||||| |||||||||| ||||||    
T  40477838 aaaaataacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttg 40477759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 53289558 - 53289637
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||| |||||||||||| || ||| ||||||||||||||||| ||||||||||||||| || |||||||||| ||||||    
T  53289558 aaaaacaactcatttaactataaatttaaagagtgagtgtacaggtacactcaaatatagtgggtgtaccatagaatttg 53289637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 32636707 - 32636626
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| ||| |||||||||||   |||||||||||||||||| |||||||||| ||||||||    
T  32636707 aaaaacaactcatttaactattaatttaaggagtgagtgtatcggtacactcaaatatattgggtgtaccatagaatttgcc 32636626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 40727674 - 40727755
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||  |||||| ||||||||| ||||||  ||||||||||||||||||||||||| ||||||||||||    
T  40727674 aaaaacaacttatttaattattaatttaaagagtgtgtgtaccggtacactcaaatatattgagtgtacaataaaatttgcc 40727755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 43745673 - 43745754
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||| |||||| ||||||||| ||||||  ||| ||||||||||||||||||||||||| ||||||||    
T  43745673 aaaaacaacttatttaactattaatttaaagagtgggtgtaccggtatactcaaatatattgagtgtaccatagaatttgcc 43745754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 46507678 - 46507758
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgc 99  Q
    |||||||||||||||||| || ||| |||||||||||| |||  ||||||||||||||| || |||||||||| |||||||    
T  46507678 aaaaataactcatttaactatgaatttaaagagtgagtttaccggtacactcaaatatagtgggtgtaccatagaatttgc 46507758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 1129454 - 1129537
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    ||||| |||| ||||||| |||||| ||||||||| ||||||  |||||||||||| |||||||||||||||| ||||| ||||    
T  1129454 aaaaacaacttatttaactattaatttaaagagtgggtgtaccggtacactcaaatgtattgagtgtaccatagaattttccaa 1129537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 33006380 - 33006297
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    ||||| |||||||||||| |||||| |||| |||| ||||||  ||||||||||||| |||| ||||| |||||||||||||||    
T  33006380 aaaaacaactcatttaactattaatttaaaaagtgggtgtacctgtacactcaaatacattgggtgtagcataaaatttgccaa 33006297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 50247304 - 50247205
Alignment:
Q  20 aaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaagtttttatccttctatt 119  Q
    |||| |||||||||||| |||||| ||||||||| ||||||  |||||||||||||||||| |||||||||  |||||| ||| | | | ||||||||||    
T  50247304 aaaacaactcatttaactattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatggaatttgtcaattatatttccttctatt 50247205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 50412398 - 50412481
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    ||||| |||||||||||| |||||| |||| ||| | |||||  |||||||||||||||||| |||||||||| ||||||||||    
T  50412398 aaaaacaactcatttaaccattaatttaaaaagtaaatgtaccggtacactcaaatatattgggtgtaccatagaatttgccaa 50412481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 51756415 - 51756497
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||| || ||||||||| |||||| |||| |||||||||||  |||||||||||||||||| |||||||||| ||||||||    
T  51756415 tcaaaaacaattcatttaactattaatttaaaaagtgagtgtacg-gtacactcaaatatattgggtgtaccatagaatttgcc 51756497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 1021056 - 1020975
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| |||| |||||||||||  ||||||||||||||| || |||||||||| ||||||||    
T  1021056 aaaaacaactcatttaactatgaatttaaaaagtgagtgtaccggtacactcaaatatagtgggtgtaccatagaatttgcc 1020975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 26457281 - 26457362
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||| |||||| ||||||||| |||||| |||||||||||||||||||  |||||| || ||||||||    
T  26457281 aaaaacaacttatttaactattaatttaaagagtgtgtgtactagtacactcaaatatattggatgtaccgtagaatttgcc 26457362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 26885297 - 26885378
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| |||||| |  ||||||   ||||||||||||||||| |||||||||||||||||||    
T  26885297 aaaaacaactcatttaactattaatttaaagaattggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcc 26885378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 29389023 - 29389104
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| ||||||||||||||||  ||||||||||||||| ||  ||||||||| ||||||||    
T  29389023 aaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtggatgtaccatagaatttgcc 29389104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 54428576 - 54428495
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| ||||||||| ||||||| ||||||||||||||| ||  ||||||||| ||||||||    
T  54428576 aaaaacaactcatttaactatgaatttaaagagtgggtgtacaggtacactcaaatataatggatgtaccatagaatttgcc 54428495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 47745908 - 47745836
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccata 91  Q
    ||||| ||||| |||||| |||||| ||||||||||||| ||  |||||||||||||||||| ||||||||||    
T  47745908 aaaaacaactcttttaactattaatttaaagagtgagtgcaccggtacactcaaatatattgggtgtaccata 47745836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 26850005 - 26849923
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| || ||| |||| |||||||||||   |||||||||||||| || |||||||||| |||||||||    
T  26850005 aaaaacaactcatttaactatgaatttaaaaagtgagtgtaccgatacactcaaatataatgggtgtaccatagaatttgcca 26849923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 50257880 - 50257802
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    |||||||||||||||||| || ||| ||||||||||||||||   |||||||||||||| |  |||||||||| |||||    
T  50257880 aaaaataactcatttaactataaatttaaagagtgagtgtaccgatacactcaaatatagtaggtgtaccatagaattt 50257802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 7352493 - 7352574
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| || ||| ||| ||||||||||||   |||||||||||||| ||  ||||||||| ||||||||    
T  7352493 aaaaataactcatttaactataaatttaatgagtgagtgtaccgatacactcaaatatagtggatgtaccatagaatttgcc 7352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 26012527 - 26012608
Alignment:
Q  19 aaaaataactcatttaacaattaa-tctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgc 99  Q
    ||||| |||||||||||| || || | |||||||||||||||| |||||||||||||||| ||  ||||||||| |||||||    
T  26012527 aaaaacaactcatttaactatgaaatttaaagagtgagtgtaccagtacactcaaatatagtggatgtaccatagaatttgc 26012608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 30349087 - 30349006
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| |||||||||| |||||   |||||||||||||| |||||||||| || ||||||||    
T  30349087 aaaaaaaactcatttaactatgaatttaaagagtgaatgtaccgatacactcaaatataatgagtgtaccgtagaatttgcc 30349006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 35137516 - 35137435
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| |||| |||||||||||  || |||||||||||| || |||||||||| ||||||||    
T  35137516 aaaaacaactcatttaactatgaatttaaaaagtgagtgtaccggtgcactcaaatatagtgggtgtaccatagaatttgcc 35137435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 35500872 - 35500791
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| || ||||||||| || ||| ||||||||||||||||  || |||||||||||| || |||||||||| ||||||||    
T  35500872 aaaaacaattcatttaactatgaatttaaagagtgagtgtaccggtgcactcaaatatagtgggtgtaccatagaatttgcc 35500791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 51350958 - 51351039
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| ||||||  |  ||||  |||||||||||||||||||  ||||||||||||||||||    
T  51350958 aaaaacaactcatttaactattaatttaaagaacggatgtattagtacactcaaatatattggatgtaccataaaatttgcc 51351039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 97
Target Start/End: Complemental strand, 34825353 - 34825285
Alignment:
Q  29 catttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    |||||||| || ||| ||||||||||||||||  ||||||||||||||| || |||||||||| |||||    
T  34825353 catttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccatataattt 34825285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 36375720 - 36375776
Alignment:
Q  23 ataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatatt 79  Q
    |||||| ||||||| |||||| |||||| ||||||||| ||||||||||||||||||    
T  36375720 ataactaatttaactattaatttaaagaatgagtgtaccagtacactcaaatatatt 36375776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 13756636 - 13756715
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||| |||||||||||| || ||| |||||||||||||||   ||||||||||||||| || ||||| |||| ||||||    
T  13756636 aaaaacaactcatttaactatgaatttaaagagtgagtgtatcggtacactcaaatatagtgggtgtaacatagaatttg 13756715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 102
Target Start/End: Original strand, 38785408 - 38785490
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||||||||||||||| |||||| ||| || |  |||||| | ||||||||||| ||||| |||||||||| ||||||||||    
T  38785408 aaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaat-tattgggtgtaccatataatttgccaa 38785490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 40473911 - 40473832
Alignment:
Q  23 ataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||| ||||||| |||||| ||||||||  ||||||  |||||||||||||||||| | |||||||| ||||| ||||    
T  40473911 ataacttatttaactattaatttaaagagtatgtgtactggtacactcaaatatattgcgcgtaccatagaatttaccaa 40473832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 100
Target Start/End: Complemental strand, 54788431 - 54788356
Alignment:
Q  25 aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||| |||||| ||||||||| |||||   |||||||||||||||||   ||||||||| ||||||||    
T  54788431 aactcatttaactattaatttaaagagtgggtgtatcggtacactcaaatatatttgatgtaccatacaatttgcc 54788356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 97
Target Start/End: Complemental strand, 42478768 - 42478690
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| ||||| |||||| |||||| |||||||||  ||||   |||||||||||||||||| |||||||||| |||||    
T  42478768 aaaaacaactcttttaactattaatttaaagagtggatgtatcggtacactcaaatatattgggtgtaccatataattt 42478690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 7862232 - 7862151
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||  |||||| ||||||||  ||||||  ||| |||||||||||||  |||||||||||||||||||    
T  7862232 aaaaacaacttatttaattattaatttaaagagtatgtgtaccggtatactcaaatatattaggtgtaccataaaatttgcc 7862151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 11140327 - 11140247
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| ||| || |  |||||| | ||||||||||| ||||| |||||||||| ||||||||    
T  11140327 aaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaat-tattgggtgtaccatagaatttgcc 11140247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 14654108 - 14654189
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| ||||| |||||| |||||| |||| ||||  ||| |  |||||||||||||||||| |||||||||| ||||||||    
T  14654108 aaaaacaactcttttaactattaatttaaatagtggatgttccggtacactcaaatatattgggtgtaccatagaatttgcc 14654189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 23456535 - 23456454
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| |||||||||  |||||   ||||||||||||||||| |||||  ||| ||||||||    
T  23456535 aaaaaaaactcatttaactattaatttaaagagtggatgtaccgatacactcaaatatattgggtgtaatatagaatttgcc 23456454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 44653256 - 44653175
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| |||||||||| | |||   ||||||||||| ||||  |||||||||| ||||||||    
T  44653256 aaaaacaactcatttaaccattaatttaaagagtgactataccgatacactcaaatgtattaggtgtaccatagaatttgcc 44653175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 4817333 - 4817417
Alignment:
Q  17 tcaaaaat-aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||| |||||||||||| |||||| |||||||| | ||||  ||| ||| ||||||||||| |||||| ||| ||||||||    
T  4817333 tcaaaaatcaactcatttaactattaatttaaagagtaattgtatcagtgcacccaaatatattgggtgtactatagaatttgcc 4817417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 24170016 - 24169956
Alignment:
Q  39 ttaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgc 99  Q
    ||||| ||||||||| ||||||   |||||||||||||| || ||||||||||||||||||    
T  24170016 ttaatttaaagagtgggtgtaccgatacactcaaatatactgggtgtaccataaaatttgc 24169956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 37521759 - 37521835
Alignment:
Q  25 aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    |||||||||||  |||||| | ||||||||||||||   |||||||||||||||||  || |||||| |||||||||    
T  37521759 aactcatttaatcattaatttgaagagtgagtgtactgatacactcaaatatattggatgcaccatataatttgcca 37521835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 35389608 - 35389687
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||| |||||||||||| |||||| ||| ||||||||||||  ||||  || |||||||||  ||||||||| ||||||    
T  35389608 aaaaacaactcatttaaccattaatttaacgagtgagtgtaccggtacgttccaatatattggatgtaccatagaatttg 35389687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 41282860 - 41282939
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||| |||| ||||||| |||||| |||||| |  ||||||  ||||||||||||||||||  |||| |||||||||||    
T  41282860 aaaaacaacttatttaactattaatttaaagaataggtgtaccggtacactcaaatatattggatgtatcataaaatttg 41282939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 41982755 - 41982793
Alignment:
Q  63 gtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  41982755 gtacactcaaatat-ttgagtgtaccataaaatttgccaa 41982793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 51344455 - 51344388
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgta 86  Q
    ||||| |||| ||||||| |||||| |||||| || ||||||  |||||||||||||||||| |||||    
T  51344455 aaaaacaacttatttaactattaatttaaagaatgtgtgtacctgtacactcaaatatattgggtgta 51344388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 16136959 - 16137029
Alignment:
Q  30 atttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||| |||||| |||||||||  |||||   |||||||||||||||||  ||||||||| ||||||||    
T  16136959 atttaactattaatttaaagagtggatgtaccgatacactcaaatatattggatgtaccatagaatttgcc 16137029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 29347586 - 29347663
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    |||||||||||||||||| |||||| |||||| |  |||||| | ||||||||||| | ||| |||||||||| |||||    
T  29347586 aaaaataactcatttaactattaatttaaagatttggtgtaccaatacactcaaat-tgttgggtgtaccatagaattt 29347663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 9251895 - 9251858
Alignment:
Q  63 gtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  9251895 gtacactcaaatatgttgagtgtaccgtaaaatttgcc 9251858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 9506984 - 9506903
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| |||||| |  ||||||   | ||||||||||||||| ||||| |||| ||||||||    
T  9506984 aaaaacaactcatttaactattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcc 9506903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 9514959 - 9514878
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| |||||| |  ||||||   | ||||||||||||||| ||||| |||| ||||||||    
T  9514959 aaaaacaactcatttaactattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcc 9514878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 25482569 - 25482650
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| |||||| |  ||||||   ||||||||||||||||  ||||||| || ||||||||    
T  25482569 aaaaacaactcatttaactattaatttaaagaataggtgtaccgatacactcaaatatattaggtgtaccttataatttgcc 25482650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 27082672 - 27082752
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| ||| || |  |||||| | ||||||||||| | |||||||||||||| || |||||    
T  27082672 aaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaat-tgttgagtgtaccatagaacttgcc 27082752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 42067659 - 42067579
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| ||| || |  |||||| | ||||||||||| | ||| |||||||||| ||||||||    
T  42067659 aaaaataactcatttaactattaatttaaggatttggtgtaccaatacactcaaat-tgttgggtgtaccatagaatttgcc 42067579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 42364253 - 42364333
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||| ||||||| |||||| ||| || |  |||||| | ||||||||||| ||||| |||||||||| ||||||||    
T  42364253 aaaaataacttatttaactattaatttaaggatttggtgtaccaatacactcaaat-tattgggtgtaccatagaatttgcc 42364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 10279325 - 10279381
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaata 75  Q
    ||||| |||||||||||| |||||| |||||||||||| ||   |||||||||||||    
T  10279325 aaaaacaactcatttaactattaatttaaagagtgagtatagcggtacactcaaata 10279381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 15996901 - 15996821
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgc 99  Q
    ||||| |||||||||||| |||||| |||| | |   |||||  ||||||| |||||||||| |||||||||| |||||||    
T  15996901 aaaaacaactcatttaactattaatttaaaaaatagatgtaccggtacacttaaatatattgggtgtaccatagaatttgc 15996821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 41982064 - 41982004
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatatt 79  Q
    ||||| |||||||||||| |||||| |||| || ||||||||   ||||||||||||||||    
T  41982064 aaaaacaactcatttaaccattaatttaaaaagcgagtgtaccgatacactcaaatatatt 41982004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 9589194 - 9589112
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| || ||| ||||||||||||||||  ||||||||||||||| || ||||||||||||||||||||    
T  9589194 aaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccataaaatttgcca 9589112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 45157611 - 45157529
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| |||||| ||||||||| ||||||  |||||||||||||||||| |||||||||| |||||||||    
T  45157611 aaaaacaactcatttaaccattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcca 45157529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 1580567 - 1580648
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||||||||||||||  ||||| |||||||| |||||||  |||||||||||||||||| |||||||||| ||||||||    
T  1580567 aaaaataactcatttaactgttaatttaaagagtaagtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 1580648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 4298227 - 4298306
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||| ||||||| |||| |||||| |||||| || ||||||  ||||||||||||||||||||||||||||||||||||    
T  4298227 aaaaacaactcatgtaactattaatttaaagaatgggtgtaccggtacactcaaatatattgagtgtaccataaaatttg 4298306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 19 - 102
Target Start/End: Complemental strand, 4740308 - 4740225
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgccaa 102  Q
    ||||| |||| ||||||| || ||| ||||||||||||||||  ||||||||||||||| || |||||||||||||||||||||    
T  4740308 aaaaacaacttatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtgggtgtaccataaaatttgccaa 4740225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 35896738 - 35896819
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||| |||||| ||||| ||| ||||||  ||||||||||||||||||||||||||||| ||||||||    
T  35896738 aaaaacaacttatttaactattaatttaaagtgtgggtgtaccggtacactcaaatatattgagtgtaccatagaatttgcc 35896819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 39620272 - 39620191
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||| |||||| ||||||||| ||||||   ||||||||||||||||| |||||||||||||||||||    
T  39620272 aaaaacaacttatttaactattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcc 39620191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 40947089 - 40947170
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||| ||||||| |||||| ||||||||||||||||  |||||||||||||||||| ||| |||||| ||||||||    
T  40947089 aaaaacaacttatttaactattaatttaaagagtgagtgtaccggtacactcaaatatattgggtgcaccatagaatttgcc 40947170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 3261045 - 3260965
Alignment:
Q  17 tcaaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    |||||||||||||||||||| |||||| |||| ||||||||||  |||| ||||||||||||||  ||||||||| |||||    
T  3261045 tcaaaaataactcatttaactattaatttaaaaagtgagtgtatcagtaaactcaaatatattggatgtaccatagaattt 3260965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 34091776 - 34091696
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgc 99  Q
    ||||| |||||||||||| |||||| ||||||||| |||||   ||||||||||||||||||| ||||||||| |||||||    
T  34091776 aaaaacaactcatttaactattaatttaaagagtgggtgtatcggtacactcaaatatattgaatgtaccatataatttgc 34091696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 98
Target Start/End: Complemental strand, 30980961 - 30980882
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    ||||| |||||||||||| |||||| |||||||||| ||||| | |||||| |||||||||| |||||||||| ||||||    
T  30980961 aaaaacaactcatttaactattaatttaaagagtgaatgtaccaatacactaaaatatattgggtgtaccatagaatttg 30980882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 17451610 - 17451692
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| || ||| |||||||||||||||| ||||||||||||||||    |||||||||| |||||||||    
T  17451610 aaaaacaactcatttaactatgaatttaaagagtgagtgtaccagtacactcaaatatagcaggtgtaccatagaatttgcca 17451692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 38064742 - 38064660
Alignment:
Q  17 tcaaaaat-aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||| |||||||||||| ||| ||  |||||||| ||||||||||||||||||||||||||  ||||||||| ||||||    
T  38064742 tcaaaaatcaactcatttaaccattcattcaaagagtgggtgtacaagtacactcaaatatattggatgtaccatagaatttg 38064660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 4049286 - 4049368
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| || ||| |||||||||||||||   ||||||||||||||| ||  ||||||||| |||||||||    
T  4049286 aaaaacaactcatttaactatgaatttaaagagtgagtgtaacggtacactcaaatatagtggatgtaccatagaatttgcca 4049368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 18999045 - 18999123
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaattt 97  Q
    ||||| |||||||||||| || ||| ||||||||||||||||  ||||||||||||||| ||  ||||||||| |||||    
T  18999045 aaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatatagtggatgtaccatagaattt 18999123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 6945421 - 6945340
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| |||||| |||| | || ||||||  ||||||||||||||||||  ||||||||| ||||||||    
T  6945421 aaaaacaactcatttaactattaatttaaaaaatgggtgtaccggtacactcaaatatattggatgtaccatagaatttgcc 6945340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 7673631 - 7673704
Alignment:
Q  25 aactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||||||| || ||| ||||||||||||||||  ||||||||||||| | || |||||||||| ||||||    
T  7673631 aactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatacagtgggtgtaccatagaatttg 7673704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 21404524 - 21404605
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||| || ||| |||| ||||||||||   ||||||||||||||| || |||||||||| ||||||||    
T  21404524 aaaaacaactcatttaactatgaatttaaatagtgagtgtatcggtacactcaaatatagtgggtgtaccatagaatttgcc 21404605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 42849653 - 42849734
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| ||||| |||||| |||||| ||||||||| |||||   ||||||||||||||||||  ||||||||| ||||||||    
T  42849653 aaaaacaactcttttaactattaatttaaagagtgggtgtatcggtacactcaaatatattggatgtaccatagaatttgcc 42849734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 9122482 - 9122561
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||||||||||||||| || ||| |||||||||| ||||   ||||||| ||||||| ||  ||||||||||||||||    
T  9122482 aaaaataactcatttaactataaatttaaagagtgaatgtatcggtacacttaaatataatggatgtaccataaaatttg 9122561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 101
Target Start/End: Complemental strand, 40495546 - 40495464
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    ||||| |||||||||||| || ||| |||||||| |||||||  ||||||||||||||| || |||| || || |||||||||    
T  40495546 aaaaacaactcatttaactatgaatttaaagagtaagtgtaccggtacactcaaatatagtgggtgtgccgtagaatttgcca 40495464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 27400780 - 27400727
Alignment:
Q  45 taaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttg 98  Q
    |||||| |||||||||||||||||||||||||||||  |||| |||| ||||||    
T  27400780 taaagaatgagtgtacaagtacactcaaatatattggatgtatcatagaatttg 27400727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 32602629 - 32602710
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||| |||||||||||  || ||| ||||||||||||||||  ||||||||||||||| ||  |||||| || ||||||||    
T  32602629 aaaaacaactcatttaattatgaatttaaagagtgagtgtaccggtacactcaaatatagtggatgtaccgtataatttgcc 32602710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 100
Target Start/End: Complemental strand, 14839861 - 14839806
Alignment:
Q  45 taaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||||||||||||  ||||||||||||| | || |||||||||| ||||||||    
T  14839861 taaagagtgagtgtactggtacactcaaatacagtgggtgtaccatagaatttgcc 14839806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 11598195 - 11598114
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    ||||||||| |||||||| |||||| |   || || |||||| | ||||||||||| | |||||||||||||| ||||||||    
T  11598195 aaaaataacacatttaactattaatttgttgattgggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 11598114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 16916 - 16990
Alignment:
Q  27 ctcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    |||||||||| |||||| ||||||||||||||||   ||||||||||||||||| |||||||||| |||||||||    
T  16916 ctcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcca 16990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 55928 - 55854
Alignment:
Q  27 ctcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcca 101  Q
    |||||||||| |||||| ||||||||||||||||   ||||||||||||||||| |||||||||| |||||||||    
T  55928 ctcatttaaccattaatttaaagagtgagtgtaccgatacactcaaatatattgggtgtaccatagaatttgcca 55854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 3355 - 3436
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||| ||||||| |||||| ||||||||  ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  3355 aaaaataacttatttaactattaatttaaagagtaggtgtactggtacactcaaatatattgggtgtaccatagaatttgcc 3436  T

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Target: scaffold0308 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 7291 - 7211
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgc 99  Q
    ||||| |||||||||||| || ||| ||||||||||||||||  ||||||||||||||| || |||||||||| |||||||    
T  7291 aaaaacaactcatttaactatgaatttaaagagtgagtgtaccggtacactcaaatataatgggtgtaccatagaatttgc 7211  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 36935 - 37015
Alignment:
Q  19 aaaaataactcatttaacaattaatctaaagagtgagtgtacaagtacactcaaatatattgagtgtaccataaaatttgcc 100  Q
    |||||||||||||||||| |||||| ||| || |  |||||  | ||||||||||| | |||||||||||||| ||||||||    
T  36935 aaaaataactcatttaactattaatttaaggatttggtgtatcaatacactcaaat-tgttgagtgtaccatagaatttgcc 37015  T

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