View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20562_low_17 (Length: 305)

Name: NF20562_low_17
Description: NF20562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20562_low_17
NF20562_low_17
[»] chr8 (24 HSPs)
chr8 (1-291)||(11476863-11477163)
chr8 (96-153)||(12972755-12972812)
chr8 (96-151)||(11494216-11494271)
chr8 (106-162)||(35298583-35298640)
chr8 (98-152)||(6918932-6918986)
chr8 (96-162)||(14482101-14482167)
chr8 (97-154)||(3645929-3645986)
chr8 (97-154)||(35869737-35869794)
chr8 (96-161)||(43208239-43208304)
chr8 (95-131)||(7918991-7919027)
chr8 (98-162)||(29699155-29699219)
chr8 (122-164)||(5290566-5290608)
chr8 (96-154)||(8194051-8194109)
chr8 (124-162)||(8536153-8536191)
chr8 (96-142)||(8578521-8578567)
chr8 (120-162)||(8629032-8629074)
chr8 (106-152)||(31875674-31875720)
chr8 (96-162)||(31884493-31884559)
chr8 (104-154)||(34563157-34563207)
chr8 (106-151)||(29592648-29592693)
chr8 (96-145)||(41336767-41336816)
chr8 (106-154)||(10727106-10727154)
chr8 (96-152)||(25872521-25872577)
chr8 (106-162)||(28769444-28769500)
[»] chr5 (20 HSPs)
chr5 (97-162)||(20982240-20982305)
chr5 (96-154)||(26516197-26516255)
chr5 (96-154)||(2569815-2569873)
chr5 (104-154)||(11153526-11153576)
chr5 (96-146)||(14716591-14716641)
chr5 (104-154)||(29115326-29115376)
chr5 (96-162)||(29588779-29588845)
chr5 (104-162)||(39128546-39128604)
chr5 (96-162)||(39257491-39257557)
chr5 (121-162)||(11684347-11684388)
chr5 (106-162)||(7096232-7096288)
chr5 (99-147)||(14331256-14331304)
chr5 (104-162)||(4991048-4991106)
chr5 (96-150)||(31687924-31687978)
chr5 (104-153)||(42582818-42582868)
chr5 (96-153)||(6738521-6738578)
chr5 (121-162)||(13224353-13224394)
chr5 (105-154)||(40534102-40534151)
chr5 (98-162)||(14714944-14715008)
chr5 (106-162)||(38819680-38819736)
[»] chr6 (26 HSPs)
chr6 (96-159)||(4003708-4003771)
chr6 (97-158)||(3217299-3217360)
chr6 (105-162)||(31668790-31668847)
chr6 (96-154)||(25099941-25100000)
chr6 (96-162)||(28130030-28130096)
chr6 (96-162)||(31461577-31461643)
chr6 (96-162)||(32975877-32975943)
chr6 (96-162)||(33068666-33068732)
chr6 (96-161)||(21888373-21888438)
chr6 (98-150)||(3155077-3155129)
chr6 (103-154)||(9732382-9732433)
chr6 (96-163)||(31420857-31420924)
chr6 (120-162)||(4247739-4247781)
chr6 (106-152)||(5623079-5623125)
chr6 (106-152)||(7351723-7351769)
chr6 (96-162)||(8349769-8349835)
chr6 (96-154)||(9833210-9833268)
chr6 (96-162)||(10452465-10452531)
chr6 (96-154)||(32408845-32408903)
chr6 (120-161)||(8010280-8010321)
chr6 (109-162)||(21959640-21959693)
chr6 (121-162)||(29249398-29249439)
chr6 (120-153)||(32386213-32386246)
chr6 (96-152)||(740983-741039)
chr6 (96-132)||(2206489-2206525)
chr6 (96-136)||(4247215-4247255)
[»] scaffold0590 (1 HSPs)
scaffold0590 (96-162)||(1179-1245)
[»] scaffold0275 (1 HSPs)
scaffold0275 (96-162)||(2730-2796)
[»] scaffold0455 (1 HSPs)
scaffold0455 (96-162)||(8617-8683)
[»] chr4 (16 HSPs)
chr4 (96-162)||(41241649-41241715)
chr4 (115-162)||(4191657-4191704)
chr4 (96-154)||(485980-486038)
chr4 (120-162)||(2980576-2980618)
chr4 (97-154)||(24443938-24443995)
chr4 (96-152)||(8422952-8423008)
chr4 (96-162)||(4471070-4471136)
chr4 (96-162)||(8703727-8703793)
chr4 (96-162)||(22684621-22684687)
chr4 (96-162)||(30024599-30024665)
chr4 (104-162)||(41050603-41050661)
chr4 (108-154)||(44319861-44319907)
chr4 (124-162)||(47970245-47970283)
chr4 (105-151)||(51555983-51556029)
chr4 (96-132)||(18512554-18512590)
chr4 (122-162)||(52645625-52645665)
[»] chr2 (13 HSPs)
chr2 (96-162)||(43456790-43456856)
chr2 (96-154)||(11393768-11393826)
chr2 (96-154)||(11410429-11410487)
chr2 (96-134)||(42817509-42817547)
chr2 (105-154)||(18884789-18884838)
chr2 (96-152)||(43808475-43808531)
chr2 (96-154)||(11393479-11393537)
chr2 (96-154)||(11410140-11410198)
chr2 (96-162)||(42974251-42974317)
chr2 (121-162)||(33197344-33197385)
chr2 (121-162)||(33267621-33267662)
chr2 (105-154)||(43965243-43965292)
chr2 (98-162)||(43431549-43431613)
[»] chr1 (15 HSPs)
chr1 (100-162)||(3224326-3224388)
chr1 (107-162)||(50998462-50998517)
chr1 (114-162)||(42397680-42397728)
chr1 (120-163)||(15489356-15489399)
chr1 (124-162)||(13037791-13037829)
chr1 (96-162)||(23895235-23895301)
chr1 (96-150)||(24263256-24263310)
chr1 (96-162)||(29794027-29794093)
chr1 (96-162)||(49557040-49557106)
chr1 (105-150)||(9506921-9506966)
chr1 (104-152)||(10744214-10744263)
chr1 (97-134)||(46504350-46504387)
chr1 (114-162)||(4202234-4202282)
chr1 (96-160)||(24857621-24857685)
chr1 (98-150)||(49365905-49365957)
[»] chr3 (23 HSPs)
chr3 (101-154)||(1288910-1288963)
chr3 (113-162)||(51278262-51278311)
chr3 (106-162)||(16790193-16790249)
chr3 (96-162)||(2070954-2071020)
chr3 (112-162)||(44284163-44284213)
chr3 (96-154)||(52323990-52324048)
chr3 (121-162)||(33307685-33307726)
chr3 (121-162)||(41028956-41028997)
chr3 (99-152)||(44240065-44240118)
chr3 (96-152)||(28842972-28843028)
chr3 (99-162)||(905075-905138)
chr3 (113-163)||(22232742-22232792)
chr3 (120-158)||(24622498-24622536)
chr3 (96-162)||(31010320-31010386)
chr3 (120-161)||(16790462-16790503)
chr3 (120-153)||(27792795-27792828)
chr3 (96-153)||(28289235-28289292)
chr3 (129-162)||(42039091-42039124)
chr3 (121-162)||(44374749-44374790)
chr3 (104-152)||(1816489-1816537)
chr3 (96-162)||(22723961-22724029)
chr3 (99-163)||(36200020-36200084)
chr3 (121-161)||(48528502-48528542)
[»] scaffold0024 (1 HSPs)
scaffold0024 (104-160)||(27483-27539)
[»] chr7 (12 HSPs)
chr7 (96-162)||(27481399-27481465)
chr7 (120-162)||(45593824-45593866)
chr7 (109-162)||(45078205-45078258)
chr7 (96-162)||(753309-753375)
chr7 (120-154)||(7244625-7244659)
chr7 (96-162)||(8445185-8445251)
chr7 (96-162)||(22388009-22388075)
chr7 (96-154)||(28340509-28340567)
chr7 (96-153)||(28844385-28844442)
chr7 (96-161)||(47003986-47004051)
chr7 (190-218)||(43515452-43515480)
chr7 (122-162)||(46213728-46213768)
[»] scaffold0110 (1 HSPs)
scaffold0110 (96-154)||(34025-34083)
[»] scaffold0654 (1 HSPs)
scaffold0654 (121-162)||(6742-6783)
[»] scaffold0085 (1 HSPs)
scaffold0085 (96-133)||(26175-26212)
[»] scaffold0014 (1 HSPs)
scaffold0014 (121-162)||(116661-116702)


Alignment Details
Target: chr8 (Bit Score: 262; Significance: 1e-146; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 291
Target Start/End: Complemental strand, 11477163 - 11476863
Alignment:
Q  1 cattgggtgagaaatctgatgatcttgatctcttggagtcaggtttgttaaatgtctac----------gcgatttcgctgtgtgaataagtacaatcgt 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||||    
T  11477163 cattgggtgagaaatctgatgatcttgatctcttggagtcaggtttgttaaatgtctagttttttttgtgcgatttcgctgtgtgaataagtacaatcgt 11477064  T
Q  91 ataagaattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaatagtctcatgagtgtcaatgtcggttca 190  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11477063 ataagaattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaatagtctcatgagtgtcaatgtcggttca 11476964  T
Q  191 aataagtcaatccaaacaaaacttatattaactttatggatttttgcagagcttgaaatgatgaaggaaagattttctaagcttcttttgggggaagata 290  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11476963 aataagtcaatccaaacaaaacttatattaactttatggatttttgcagagcttgaaatgatgaaggaaagattttctaagcttcttttgggggaagata 11476864  T
Q  291 t 291  Q
    |    
T  11476863 t 11476863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 12972755 - 12972812
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttc 153  Q
    ||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  12972755 aattaagcgcttatagcataagcatttatcatataagtgcttatgtataagctatttc 12972812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 11494216 - 11494271
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatt 151  Q
    |||||||| ||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  11494216 aattaagtacttatagcataagctcttattatataagtgctcatgtataagctatt 11494271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 35298640 - 35298583
Alignment:
Q  106 ttatagcataagc-ttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||||| ||||||||    
T  35298640 ttatagcataatcattttatcatataagtgcttatgtataagctatttcagtaacaaa 35298583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 6918932 - 6918986
Alignment:
Q  98 ttaagtgcttatagcataagcttttatcatataagtgctaatgtataagctattt 152  Q
    |||||||  |||||||||||  ||||||||||||||||| |||||||||||||||    
T  6918932 ttaagtgtctatagcataagtgtttatcatataagtgcttatgtataagctattt 6918986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 14482101 - 14482167
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||| |||||||||| ||   |||||||||||||||| |||||||| |||||||| |||||||    
T  14482101 aattaagttcttatagcattagtgcttatcatataagtgcttatgtataaactatttctataacaaa 14482167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 3645986 - 3645929
Alignment:
Q  97 attaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||| || ||||||||||||  |||||||||||||||||  ||||||||||||||||    
T  3645986 attaaatgtttatagcataagtgtttatcatataagtgcttgtgtataagctatttct 3645929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 35869737 - 35869794
Alignment:
Q  97 attaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    |||||| |||||||||||||||  ||||||||||||| || |||||||||| ||||||    
T  35869737 attaagcgcttatagcataagcacttatcatataagttcttatgtataagcgatttct 35869794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 161
Target Start/End: Complemental strand, 43208304 - 43208239
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaa 161  Q
    |||||||||||||||| |||| | || |||||||||||  | ||||||||||||||||| ||||||    
T  43208304 aattaagtgcttatagtataaacgttcatcatataagtatttatgtataagctatttctataacaa 43208239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 7919027 - 7918991
Alignment:
Q  95 gaattaagtgcttatagcataagcttttatcatataa 131  Q
    ||||||||||||||||| |||||||||||||||||||    
T  7919027 gaattaagtgcttatagtataagcttttatcatataa 7918991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 29699155 - 29699219
Alignment:
Q  98 ttaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||||||||||   |||||||||||| |||| ||||| ||| ||||||| |||||||    
T  29699155 ttaagtgcttatagcataaatatttatcatataaatgcttatgtacaagttatttctataacaaa 29699219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 164
Target Start/End: Original strand, 5290566 - 5290608
Alignment:
Q  122 tatcatataagtgctaatgtataagctatttctgtaacaaata 164  Q
    ||||||| ||||||| ||||||||||||||||| |||||||||    
T  5290566 tatcatacaagtgcttatgtataagctatttctataacaaata 5290608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 8194109 - 8194051
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    |||||||  |||||||||||||| || ||||| |||||||| ||| |||||||||||||    
T  8194109 aattaagcccttatagcataagcattcatcatttaagtgcttatggataagctatttct 8194051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 8536191 - 8536153
Alignment:
Q  124 tcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  8536191 tcatataagtgcttatgtataagctatttctataacaaa 8536153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 8578521 - 8578567
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgta 142  Q
    |||||| ||||||||||||||||  |||||||||||||||| |||||    
T  8578521 aattaaatgcttatagcataagcacttatcatataagtgcttatgta 8578567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 8629032 - 8629074
Alignment:
Q  120 tttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||||||| || |||||||||||||| |||||||    
T  8629032 tttatcatataagtgcttatttataagctatttctataacaaa 8629074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 31875720 - 31875674
Alignment:
Q  106 ttatagcataagcttttatcatataagtgctaatgtataagctattt 152  Q
    |||||||||||||  |||||||||||||||| || ||||||||||||    
T  31875720 ttatagcataagcgcttatcatataagtgcttatctataagctattt 31875674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 31884493 - 31884559
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||  ||||||||||||||  |||||||| ||||||  ||||||||| ||||||| |||||||    
T  31884493 aattaagcacttatagcataagcgcttatcatacaagtgcatatgtataagttatttctataacaaa 31884559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 154
Target Start/End: Original strand, 34563157 - 34563207
Alignment:
Q  104 gcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||||||||| | ||||||||||||||||| || |||||| |||||||    
T  34563157 gcttatagcataaacatttatcatataagtgcttatatataagttatttct 34563207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 29592693 - 29592648
Alignment:
Q  106 ttatagcataagcttttatcatataagtgctaatgtataagctatt 151  Q
    |||||||||||| | ||||||||||||||||  |||||||||||||    
T  29592693 ttatagcataagttcttatcatataagtgcttttgtataagctatt 29592648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 41336816 - 41336767
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataa 145  Q
    |||||| |||||||||||||||| ||||||| |||| |||| ||||||||    
T  41336816 aattaattgcttatagcataagcgtttatcaaataaatgcttatgtataa 41336767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 154
Target Start/End: Original strand, 10727106 - 10727154
Alignment:
Q  106 ttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||||||||  || |||||||||||||| ||| |||||||||||||    
T  10727106 ttatagcataagtgttcatcatataagtgcttatgcataagctatttct 10727154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 25872577 - 25872521
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctattt 152  Q
    |||| |||||| ||||||||||  |||||| |||||||||| | |||||||||||||    
T  25872577 aatttagtgctcatagcataagtgtttatcgtataagtgcttacgtataagctattt 25872521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 28769500 - 28769444
Alignment:
Q  106 ttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||   ||||||||||| |||| |||||||||||||| || |||||||    
T  28769500 ttatagcataagtgcttatcatataaatgcttatgtataagctattcctataacaaa 28769444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 162
Target Start/End: Complemental strand, 20982305 - 20982240
Alignment:
Q  97 attaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||||||||||||   |||||||||||||||| ||||||||||||||||| |||||||    
T  20982305 attaagtgcttatagcataagtgcttatcatataagtgcttatgtataagctatttctataacaaa 20982240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 26516197 - 26516255
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||| |||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  26516197 aattaagcgcttatagcataagcgcttatcatataagtgcttatgtataagctatttct 26516255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 2569873 - 2569815
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||| ||||||| | ||| | ||||||||||||||||| |||||||||||||||||    
T  2569873 aattaagcgcttataccgtaaacatttatcatataagtgcttatgtataagctatttct 2569815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 11153576 - 11153526
Alignment:
Q  104 gcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||||||||||  ||||||||||||||||| ||||||||||| |||||    
T  11153576 gcttatagcataagactttatcatataagtgcttatgtataagctctttct 11153526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 14716641 - 14716591
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataag 146  Q
    ||||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  14716641 aattaagtgcttatagcataaggatttgtcatataagtgcttatgtataag 14716591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 29115376 - 29115326
Alignment:
Q  104 gcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||||||||| | ||||||||| ||||||| |||||||||||||||||    
T  29115376 gcttatagcataaacatttatcataaaagtgcttatgtataagctatttct 29115326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 29588779 - 29588845
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||| ||||||||||||| |  || | ||||||||||| ||||||||||||||||| |||||||    
T  29588779 aattaagcgcttatagcataaacactttttatataagtgcttatgtataagctatttctataacaaa 29588845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 39128546 - 39128604
Alignment:
Q  104 gcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||||||||| | ||||| ||||| |||||||||||| |||| |||||||    
T  39128546 gcttatagcataagcttttttaatatatgtgcttatgtataagctaattctataacaaa 39128604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 39257557 - 39257491
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||| ||||||||||||| || ||||||| |||||||| ||||||| ||||| ||| |||||||    
T  39257557 aattaagcgcttatagcataaactattatcatgtaagtgcttatgtatatgctatctctataacaaa 39257491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 11684347 - 11684388
Alignment:
Q  121 ttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||||||||||||||||||||||| | |||||||    
T  11684347 ttatcatataagtgctaatgtataagctatttttataacaaa 11684388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 7096288 - 7096232
Alignment:
Q  106 ttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||| || || |||||| ||||||| ||||||||||||||||| |||||||    
T  7096288 ttatagcatatgcattaatcatacaagtgcttatgtataagctatttctataacaaa 7096232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 14331256 - 14331304
Alignment:
Q  99 taagtgcttatagcataagcttttatcatataagtgctaatgtataagc 147  Q
    |||||||||||||||||| |  |||| ||||||||||||||||||||||    
T  14331256 taagtgcttatagcataaccaattatgatataagtgctaatgtataagc 14331304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 4991106 - 4991048
Alignment:
Q  104 gcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||||||  |||||||||||||| |  |||||||||||||| | |||||||    
T  4991106 gcttatagcataagcgattatcatataagtgtttgtgtataagctatttttataacaaa 4991048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 31687924 - 31687978
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctat 150  Q
    |||||| ||||||||||||| ||  |||||||||||||||| ||| |||||||||    
T  31687924 aattaaatgcttatagcataggcgcttatcatataagtgcttatgaataagctat 31687978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 42582818 - 42582868
Alignment:
Q  104 gcttatagcataagcttttatcat-ataagtgctaatgtataagctatttc 153  Q
    ||||||||||||||| |||||||| ||||| ||| ||||||||||||||||    
T  42582818 gcttatagcataagcgtttatcataataagcgcttatgtataagctatttc 42582868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 6738578 - 6738521
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttc 153  Q
    ||||||| | ||||||||||| |  ||||||||||||| || ||||||||||||||||    
T  6738578 aattaagagtttatagcataaacacttatcatataagtacttatgtataagctatttc 6738521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 13224353 - 13224394
Alignment:
Q  121 ttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||| ||||||| ||||||||||||||||| |||||||    
T  13224353 ttatcatagaagtgcttatgtataagctatttctataacaaa 13224394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 40534102 - 40534151
Alignment:
Q  105 cttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||||||||||  ||||||||||||  || |||||||||||||||||    
T  40534102 cttatagcataagcgcttatcatataaggacttatgtataagctatttct 40534151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 14715008 - 14714944
Alignment:
Q  98 ttaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||| |||||| |  || || |||||||| | ||||||||||||||||| |||||||    
T  14715008 ttaagtgcttatggcataaacgcttctcgtataagtgattatgtataagctatttctataacaaa 14714944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 38819736 - 38819680
Alignment:
Q  106 ttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||| ||||||||  |||||||||||| ||| ||||||| ||||||||| |||||||    
T  38819736 ttatggcataagcacttatcatataagggcttatgtatacgctatttctataacaaa 38819680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 159
Target Start/End: Complemental strand, 4003771 - 4003708
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaac 159  Q
    |||||||||||||||||||||| ||||||  |||||||||| ||||||||||||||||| ||||    
T  4003771 aattaagtgcttatagcataagtttttatgctataagtgcttatgtataagctatttctataac 4003708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 97 - 158
Target Start/End: Complemental strand, 3217360 - 3217299
Alignment:
Q  97 attaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaa 158  Q
    ||||||||||||||| ||||||  |||||||||||||||| ||||||||||||||| |||||    
T  3217360 attaagtgcttatagtataagcgattatcatataagtgcttatgtataagctatttttgtaa 3217299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 31668847 - 31668790
Alignment:
Q  105 cttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||||  |||||||||||||||| ||||||||||||||||| |||||||    
T  31668847 cttatagcataagcaattatcatataagtgcttatgtataagctatttctataacaaa 31668790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 25099941 - 25100000
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtat-aagctatttct 154  Q
    ||||||||| |||||||||||||||||||||||| |||||| |||||| |||||||||||    
T  25099941 aattaagtgtttatagcataagcttttatcatatcagtgcttatgtatcaagctatttct 25100000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 28130096 - 28130030
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||||||||||||| | |||||||||||| ||  ||| |||||||||||| |||||||    
T  28130096 aattaagtgcttatagcataagcgtctatcatataagtacttgtgtttaagctatttctataacaaa 28130030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 31461577 - 31461643
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||||||  ||||||  ||||  |||||||||| ||||||||||||||||| |||||||    
T  31461577 aattaagtgcttatattataagcacttattgtataagtgcttatgtataagctatttctataacaaa 31461643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 32975877 - 32975943
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||| | |||||||||||||  || ||||||||||| | ||||||||| |||||||||||||||    
T  32975877 aattaagcgtttatagcataagcgcttctcatataagtgtttatgtataagttatttctgtaacaaa 32975943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 33068732 - 33068666
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||| |||||||||||||  |||||| |||| |||| ||||||||| ||||||| |||||||    
T  33068732 aattaagtgtttatagcataagcgcttatcaaataaatgcttatgtataagttatttctataacaaa 33068666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 21888373 - 21888438
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaa 161  Q
    ||||||| | ||||||| ||| || |||||||||||||| | |||||||| |||||||||||||||    
T  21888373 aattaagagtttatagcttaaactattatcatataagtgtttatgtataatctatttctgtaacaa 21888438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 150
Target Start/End: Original strand, 3155077 - 3155129
Alignment:
Q  98 ttaagtgcttatagcataagcttttatcatataagtgctaatgtataagctat 150  Q
    ||||| ||||||||||||||| |||||||||||| || | |||||||||||||    
T  3155077 ttaagcgcttatagcataagcgtttatcatataaatggttatgtataagctat 3155129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 154
Target Start/End: Original strand, 9732382 - 9732433
Alignment:
Q  103 tgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    |||||||||||||| | |||| |||||||||||| ||| |||||||||||||    
T  9732382 tgcttatagcataaacatttaccatataagtgcttatgcataagctatttct 9732433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 31420857 - 31420924
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaat 163  Q
    ||||||||| ||||||||||| | ||||| ||||||||| | || |||||||||||||| ||| ||||    
T  31420857 aattaagtgtttatagcataatcatttattatataagtgtttatttataagctatttctataataaat 31420924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 4247781 - 4247739
Alignment:
Q  120 tttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||| |||||||| ||||||||||||||||| |||||||    
T  4247781 tttatcatgtaagtgcttatgtataagctatttctataacaaa 4247739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 5623079 - 5623125
Alignment:
Q  106 ttatagcataagcttttatcatataagtgctaatgtataagctattt 152  Q
    ||||||||||| | ||||||||||||||||| ||||||||| |||||    
T  5623079 ttatagcataatcgtttatcatataagtgcttatgtataagatattt 5623125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 7351769 - 7351723
Alignment:
Q  106 ttatagcataagcttttatcatataagtgctaatgtataagctattt 152  Q
    |||||||||||||| ||||||||||| |||| |||||||| ||||||    
T  7351769 ttatagcataagctcttatcatataaatgcttatgtataaactattt 7351723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 8349835 - 8349769
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||| ||||||||||||| |  |||||||||||||| |  ||||||| |||||||| |||||||    
T  8349835 aattaagcgcttatagcataaccacttatcatataagtgtttgtgtataaactatttctctaacaaa 8349769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 9833268 - 9833210
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||||| ||||| ||||||| |||||||||||||||||  | |||||| |||||||    
T  9833268 aattaagtgtttataacataagcgtttatcatataagtgcttctctataagatatttct 9833210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 10452531 - 10452465
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||  |||||||||||||    |||||||| |||||| ||||||||||||||||| |||||||    
T  10452531 aattaagctcttatagcataagtggctatcatatcagtgcttatgtataagctatttctataacaaa 10452465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 32408845 - 32408903
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||||| ||||||||||| || | ||||||||| || | |||||||||||||||||    
T  32408845 aattaagtgtttatagcataaactatgatcatataaatgttgatgtataagctatttct 32408903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Original strand, 8010280 - 8010321
Alignment:
Q  120 tttatcatataagtgctaatgtataagctatttctgtaacaa 161  Q
    ||||||||||||||||| | ||||||||||||||| ||||||    
T  8010280 tttatcatataagtgcttaggtataagctatttctataacaa 8010321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 21959640 - 21959693
Alignment:
Q  109 tagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||| ||||||||| ||||||| | ||||||||||||||  |||||||    
T  21959640 tagcataagcctttatcatagaagtgcttaagtataagctatttccataacaaa 21959693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 29249398 - 29249439
Alignment:
Q  121 ttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||||||| |||||| |||||||||| |||||||    
T  29249398 ttatcatataagtgcttatgtatcagctatttctataacaaa 29249439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 32386246 - 32386213
Alignment:
Q  120 tttatcatataagtgctaatgtataagctatttc 153  Q
    ||||||||||||||||| ||||||||||||||||    
T  32386246 tttatcatataagtgcttatgtataagctatttc 32386213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 741039 - 740983
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctattt 152  Q
    ||||| |||| | ||||| |||| |||||||||||| |||| |||||||||||||||    
T  741039 aattacgtgcctgtagcagaagcgtttatcatataaatgcttatgtataagctattt 740983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Original strand, 2206489 - 2206525
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataag 132  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  2206489 aattaagtgcttatagcataagctcttatcgtataag 2206525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 4247255 - 4247215
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgct 136  Q
    ||||||||||||||||||||||   ||||||||||||||||    
T  4247255 aattaagtgcttatagcataagtacttatcatataagtgct 4247215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 1245 - 1179
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||| |||||||||||| | | ||||||||||||||| ||||||||||||||||| |||||||    
T  1245 aattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatttctataacaaa 1179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 2730 - 2796
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||| |||||||||||| | | ||||||||||||||| ||||||||||||||||| |||||||    
T  2730 aattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatttctataacaaa 2796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 8683 - 8617
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||||||||||||| | |||||||||||| ||  ||| |||||||||||| |||||||    
T  8683 aattaagtgcttatagcataagcgtctatcatataagtacttgtgtttaagctatttctataacaaa 8617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 41241715 - 41241649
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||||||||||||| | |||||||||||| ||  ||| |||||||||||| |||||||    
T  41241715 aattaagtgcttatagcataagcgtctatcatataagtacttgtgtttaagctatttctataacaaa 41241649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 162
Target Start/End: Original strand, 4191657 - 4191704
Alignment:
Q  115 aagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||||    
T  4191657 aagcgtttatcatataagtgcttatgtataagctatttctataacaaa 4191704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 485980 - 486038
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||| |||||||||||||||  |||||||| ||||||| ||||||| |||||||||    
T  485980 aattaagcgcttatagcataagcgcttatcataaaagtgcttatgtatatgctatttct 486038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 2980618 - 2980576
Alignment:
Q  120 tttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||||||| ||||||||||||||||| |||||||    
T  2980618 tttatcatataagtgcttatgtataagctatttctataacaaa 2980576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 24443938 - 24443995
Alignment:
Q  97 attaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    |||||| |||||||||||||||  ||||||||||||| || |||||||||| ||||||    
T  24443938 attaagcgcttatagcataagcacttatcatataagttcttatgtataagcgatttct 24443995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 8423008 - 8422952
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctattt 152  Q
    ||||||||| ||||||||||| | | ||||||||| ||||| |||||||||||||||    
T  8423008 aattaagtgtttatagcataatcatgtatcatatatgtgcttatgtataagctattt 8422952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 4471070 - 4471136
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||| ||||||||||||||||  |||| ||||||||||| ||| |||| |||||| | |||||||    
T  4471070 aattaactgcttatagcataagcaattattatataagtgcttatgcataaactatttttataacaaa 4471136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 8703793 - 8703727
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||||| |||||    |||||| || |||||| ||||||||||||||||| |||||||    
T  8703793 aattaagtgcttataacataaatacttatcagatgagtgcttatgtataagctatttctctaacaaa 8703727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 22684687 - 22684621
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||| |||||||| |||| ||  ||||||||||| ||||  |||||||||||||||| |||||||    
T  22684687 aattaattgcttataccatatgcgcttatcatataaatgcttctgtataagctatttctataacaaa 22684621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 30024599 - 30024665
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||| |||||| | |||| |||||||||||||| || ||| ||||| ||||||| |||||||    
T  30024599 aattaagtgtttatagtagaagcgtttatcatataagtacttatgcataagttatttctataacaaa 30024665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 41050603 - 41050661
Alignment:
Q  104 gcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||| | |  |||||||||||||| |||||||||| |||||||| |||||||    
T  41050603 gcttatagcatgaccacttatcatataagtgttaatgtataaactatttctataacaaa 41050661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 44319861 - 44319907
Alignment:
Q  108 atagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    |||||||||||  |||||||||||||||| |||||||| ||||||||    
T  44319861 atagcataagcacttatcatataagtgctcatgtataaactatttct 44319907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 47970245 - 47970283
Alignment:
Q  124 tcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaa 47970283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 151
Target Start/End: Complemental strand, 51556029 - 51555983
Alignment:
Q  105 cttatagcataagcttttatcatataagtgctaatgtataagctatt 151  Q
    |||||| ||||| | ||||||||||||||||| ||||||||||||||    
T  51556029 cttataacataaccatttatcatataagtgcttatgtataagctatt 51555983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 132
Target Start/End: Complemental strand, 18512590 - 18512554
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataag 132  Q
    ||||||||||||||||||||| | |||||||||||||    
T  18512590 aattaagtgcttatagcataaacatttatcatataag 18512554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 52645625 - 52645665
Alignment:
Q  122 tatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||| | |||||| ||||||||||||||||||    
T  52645625 tatcatataagtgtttatgtatgagctatttctgtaacaaa 52645665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 43456856 - 43456790
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||  |||||||||||||| ||||||| ||||||||||||||||||||| ||| | |||||||    
T  43456856 aattaagcacttatagcataagcatttatcacataagtgctaatgtataagctttttttataacaaa 43456790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 11393826 - 11393768
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    |||||||  |||||||||||| | |||||||| |||||||| |||||||||||||||||    
T  11393826 aattaagcacttatagcataaacatttatcatttaagtgcttatgtataagctatttct 11393768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 11410487 - 11410429
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    |||||||  |||||||||||| | |||||||| |||||||| |||||||||||||||||    
T  11410487 aattaagcacttatagcataaacatttatcatttaagtgcttatgtataagctatttct 11410429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 42817547 - 42817509
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtg 134  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  42817547 aattaagtgcttatagcataagcgtttatcatataagtg 42817509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 154
Target Start/End: Original strand, 18884789 - 18884838
Alignment:
Q  105 cttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    |||||||||| || |||||||||||||||||| ||||||||| |||||||    
T  18884789 cttatagcattagtttttatcatataagtgctcatgtataagttatttct 18884838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 43808475 - 43808531
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctattt 152  Q
    ||||||||| |||||||||||||   ||||||||||||| | |||||||||||||||    
T  43808475 aattaagtgtttatagcataagcgcgtatcatataagtgtttatgtataagctattt 43808531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 11393537 - 11393479
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    |||||||  ||||||||| |||  ||||||||||||||||| || ||||||||||||||    
T  11393537 aattaagcacttatagcacaagtgtttatcatataagtgcttatctataagctatttct 11393479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 11410198 - 11410140
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    |||||||  ||||||||| |||  ||||||||||||||||| || ||||||||||||||    
T  11410198 aattaagcacttatagcacaagtgtttatcatataagtgcttatctataagctatttct 11410140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 42974251 - 42974317
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||| ||||||||||||| |  ||||||||| ||||||  ||||||| |||||||| |||||||    
T  42974251 aattaagagcttatagcataaacacttatcatattagtgcttgtgtataaactatttctataacaaa 42974317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 33197385 - 33197344
Alignment:
Q  121 ttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||||||| || |||||||||||||| |||||||    
T  33197385 ttatcatataagtgcttatctataagctatttctataacaaa 33197344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 33267662 - 33267621
Alignment:
Q  121 ttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||||||| |||||||| |||||||| |||||||    
T  33267662 ttatcatataagtgcttatgtataatctatttctataacaaa 33267621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 43965292 - 43965243
Alignment:
Q  105 cttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||||||||||  |||||||||||||| | ||| |||||||||||||    
T  43965292 cttatagcataagcacttatcatataagtgtttatgaataagctatttct 43965243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 43431613 - 43431549
Alignment:
Q  98 ttaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||| |||||||| ||| ||  |||||||||||||| ||||||||||| ||||||  |||||||    
T  43431613 ttaagcgcttataggataggcgcttatcatataagtgttaatgtataagttatttcaataacaaa 43431549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 3224326 - 3224388
Alignment:
Q  100 aagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||| ||||||| |||||||||||||  |||||||||||||||||| | |||||||    
T  3224326 aagtgcttataacataagcatttatcatataagctctaatgtataagctatttatataacaaa 3224388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 162
Target Start/End: Original strand, 50998462 - 50998517
Alignment:
Q  107 tatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||| |||||| ||||||||||| | ||| |||||||||||||||||||||||||    
T  50998462 tatagtataagcgtttatcatataggcgcttatgtataagctatttctgtaacaaa 50998517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 42397680 - 42397728
Alignment:
Q  114 taagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||| |||| | |||||||||| |||||||||||||||||||||||||    
T  42397680 taagcgtttaacttataagtgcttatgtataagctatttctgtaacaaa 42397728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 15489356 - 15489399
Alignment:
Q  120 tttatcatataagtgctaatgtataagctatttctgtaacaaat 163  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||    
T  15489356 tttatcatttaagtgcttatgtataagctatttctgtgacaaat 15489399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 13037791 - 13037829
Alignment:
Q  124 tcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  13037791 tcatataagtgcttatgtataagctatttctataacaaa 13037829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 23895235 - 23895301
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||  |||| |||||||||  |||||||||||||  | ||||||||||||||||| |||||||    
T  23895235 aattaagcacttaaagcataagcccttatcatataagttattatgtataagctatttctataacaaa 23895301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 150
Target Start/End: Complemental strand, 24263310 - 24263256
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctat 150  Q
    ||||||||||||||||||||| | |||| |||||||||| | |||||||| ||||    
T  24263310 aattaagtgcttatagcataaacgtttagcatataagtgtttatgtataacctat 24263256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 29794093 - 29794027
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||| ||||||||||||||  ||| ||||||| ||| | ||||||| ||||||| |||||||||    
T  29794093 aattaagcgcttatagcataagtgtttttcatatatgtgtttatgtataggctatttttgtaacaaa 29794027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 49557040 - 49557106
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||||| | ||| |  ||||||||||||||||  |||||||| ||||||| |||||||    
T  49557040 aattaagtgcttataacgtaatcacttatcatataagtgctgctgtataagttatttctataacaaa 49557106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 9506921 - 9506966
Alignment:
Q  105 cttatagcataagcttttatcatataagtgctaatgtataagctat 150  Q
    |||||||||||||| ||||||||||||||||| ||| |||| ||||    
T  9506921 cttatagcataagcatttatcatataagtgcttatgaataaactat 9506966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 10744214 - 10744263
Alignment:
Q  104 gcttatagcataagcttttatcat-ataagtgctaatgtataagctattt 152  Q
    |||||||||||||||  ||||||| | |||||||||||||||||||||||    
T  10744214 gcttatagcataagcgcttatcatgacaagtgctaatgtataagctattt 10744263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 46504387 - 46504350
Alignment:
Q  97 attaagtgcttatagcataagcttttatcatataagtg 134  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  46504387 attaagtgtttatagcataagctcttatcatataagtg 46504350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 4202282 - 4202234
Alignment:
Q  114 taagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||| ||||||||||||||||| | ||||||| ||||||| |||||||    
T  4202282 taagcgtttatcatataagtgcttaagtataagttatttctataacaaa 4202234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 24857685 - 24857621
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaaca 160  Q
    |||||||||||| || |||||||  | |||||||||||| | |||||||| |||||||| |||||    
T  24857685 aattaagtgcttgtatcataagcactaatcatataagtgtttatgtataaactatttctataaca 24857621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 150
Target Start/End: Complemental strand, 49365957 - 49365905
Alignment:
Q  98 ttaagtgcttatagcataagcttttatcatataagtgctaatgtataagctat 150  Q
    ||||| ||||||||||||| | ||||| ||||||||||| |||| ||||||||    
T  49365957 ttaagcgcttatagcataaacgtttataatataagtgcttatgtgtaagctat 49365905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 1288963 - 1288910
Alignment:
Q  101 agtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||    
T  1288963 agtgcttatagcgtaagcgtttatcatataagtgcttatgtatacgctatttct 1288910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 113 - 162
Target Start/End: Complemental strand, 51278311 - 51278262
Alignment:
Q  113 ataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||| |||||||||||| |||||||||||||||||||||| |||||||    
T  51278311 ataagcatttatcatataattgctaatgtataagctatttctataacaaa 51278262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 16790249 - 16790193
Alignment:
Q  106 ttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||| ||||||||||||||||| || |||||| ||||||| |||||||    
T  16790249 ttatagcataagcgtttatcatataagtgcttatatataagttatttctataacaaa 16790193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 2070954 - 2071020
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||  |||||||||||||   |||||| ||||||| ||||||||||||||||||| |||||||    
T  2070954 aattaagcacttatagcataagtacttatcacataagtgttaatgtataagctatttctttaacaaa 2071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 44284213 - 44284163
Alignment:
Q  112 cataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||  ||||||||||||| |||||||||||||||||||| |||||||    
T  44284213 cataagcgattatcatataagtactaatgtataagctatttctataacaaa 44284163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 52324048 - 52323990
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||||||||||||||||||  |||| ||||||||| || |||||||| ||||||||    
T  52324048 aattaagtgcttatagcataagtgtttagcatataagtacttatgtataaactatttct 52323990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 33307726 - 33307685
Alignment:
Q  121 ttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  33307726 ttatcatataagtgcttatgtataagctatttcagtaacaaa 33307685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 41028997 - 41028956
Alignment:
Q  121 ttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||||||| ||||||||||||||||| |||||||    
T  41028997 ttatcatataagtgcttatgtataagctatttctataacaaa 41028956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 152
Target Start/End: Original strand, 44240065 - 44240118
Alignment:
Q  99 taagtgcttatagcataagcttttatcatataagtgctaatgtataagctattt 152  Q
    |||||||||||||||||| | ||||||||||||||||| || | ||||||||||    
T  44240065 taagtgcttatagcataatcatttatcatataagtgcttatctttaagctattt 44240118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 28843028 - 28842972
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctattt 152  Q
    |||||||  |||||| |||||||  |||||||||||||||| |||||||||||||||    
T  28843028 aattaagcacttatatcataagcgcttatcatataagtgcttatgtataagctattt 28842972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 905138 - 905075
Alignment:
Q  99 taagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||| |||| |||||||||| | ||||||||||| ||| | ||||||||||||||| |||||||    
T  905138 taagcgcttttagcataagcctatatcatataagcgcttaagtataagctatttctataacaaa 905075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 22232742 - 22232792
Alignment:
Q  113 ataagcttttatcatataagtgctaatgtataagctatttctgtaacaaat 163  Q
    ||||||| ||||||||||| |||| ||||||||||||||| | ||||||||    
T  22232742 ataagctcttatcatataaatgctcatgtataagctatttatataacaaat 22232792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 24622498 - 24622536
Alignment:
Q  120 tttatcatataagtgctaatgtataagctatttctgtaa 158  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  24622498 tttatcatataagtgttaatgtataagctatttgtgtaa 24622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 31010320 - 31010386
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||| |||||| ||||||||||||||||||| ||||| ||| ||||  ||||||  |||||||    
T  31010320 aattaagtacttataacataagcttttatcatatatgtgcttatgcataaattatttcaataacaaa 31010386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 161
Target Start/End: Complemental strand, 16790503 - 16790462
Alignment:
Q  120 tttatcatataagtgctaatgtataagctatttctgtaacaa 161  Q
    ||||||||||||||||| ||||||||||||||| | ||||||    
T  16790503 tttatcatataagtgcttatgtataagctatttttataacaa 16790462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 27792795 - 27792828
Alignment:
Q  120 tttatcatataagtgctaatgtataagctatttc 153  Q
    ||||||||||||||||| ||||||||||||||||    
T  27792795 tttatcatataagtgcttatgtataagctatttc 27792828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Complemental strand, 28289292 - 28289235
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttc 153  Q
    ||||||||| || |||||||| |  ||||||| |||||||| ||||||||||||||||    
T  28289292 aattaagtgtttttagcataaacacttatcatctaagtgctcatgtataagctatttc 28289235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 162
Target Start/End: Original strand, 42039091 - 42039124
Alignment:
Q  129 taagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||| |||||||||||||||||||||||||    
T  42039091 taagtgcttatgtataagctatttctgtaacaaa 42039124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 44374790 - 44374749
Alignment:
Q  121 ttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||||||| ||||||||||||| ||| |||||||    
T  44374790 ttatcatataagtgcttatgtataagctatatctttaacaaa 44374749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 1816489 - 1816537
Alignment:
Q  104 gcttatagcataagcttttatcatataagtgctaatgtataagctattt 152  Q
    |||||||||||||   ||||||||||||| |||||||||||| ||||||    
T  1816489 gcttatagcataattgtttatcatataagagctaatgtataaactattt 1816537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 22723961 - 22724029
Alignment:
Q  96 aattaagtgcttatagcat-aagcttttatca-tataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||| ||||||||||| ||| |||||||| |||||||||| |||| ||||||| |||| |||||||    
T  22723961 aattaagcgcttatagcataaagattttatcagtataagtgcttatgtttaagctacttctataacaaa 22724029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 36200020 - 36200084
Alignment:
Q  99 taagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaat 163  Q
    |||| ||||||| ||||||   ||||||||||||| || |||||| |||||||| ||||||||||    
T  36200020 taagcgcttataacataagagcttatcatataagttcttatgtatcagctatttatgtaacaaat 36200084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 161
Target Start/End: Original strand, 48528502 - 48528542
Alignment:
Q  121 ttatcatataagtgctaatgtataagctatttctgtaacaa 161  Q
    ||||||||||||| || ||||||||||||||||| ||||||    
T  48528502 ttatcatataagtacttatgtataagctatttctataacaa 48528542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 27483 - 27539
Alignment:
Q  104 gcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaaca 160  Q
    |||||||||||||||| ||||||| |||||||| ||||||||| ||||||| |||||    
T  27483 gcttatagcataagctcttatcatgtaagtgcttatgtataagttatttctataaca 27539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 27481465 - 27481399
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||| |||||||||||||||   ||||| ||||||||| | ||||||||||||||||| |||||||    
T  27481465 aattaggtgcttatagcataaatgtttattatataagtgtttatgtataagctatttctataacaaa 27481399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 162
Target Start/End: Complemental strand, 45593866 - 45593824
Alignment:
Q  120 tttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||| |||| |||||||||||||||||||||||||    
T  45593866 tttatcatataaatgcttatgtataagctatttctgtaacaaa 45593824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 162
Target Start/End: Original strand, 45078205 - 45078258
Alignment:
Q  109 tagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||| | ||||||||||||||||| ||||||||||||||| | |||||||    
T  45078205 tagcataaacgtttatcatataagtgcttatgtataagctatttttataacaaa 45078258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 753375 - 753309
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||| ||||||||||| | ||||||||||||| |||  ||||||  |||||||| |||||||    
T  753375 aattaagtgtttatagcataaacatttatcatataagcgcttgtgtatacactatttctataacaaa 753309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 7244625 - 7244659
Alignment:
Q  120 tttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||||||||||||| |||||||||||||||||    
T  7244625 tttatcatataagtgcttatgtataagctatttct 7244659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 8445185 - 8445251
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||| |||||||| ||  |||||||||||||||||  | |||||||||||| | |||||||    
T  8445185 aattaagtgcgtatagcattagtgtttatcatataagtgcttgtttataagctatttttataacaaa 8445251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 22388075 - 22388009
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||| ||||||| ||||| |  ||||||| |||||||| ||| ||||||||||||| |||||||    
T  22388075 aattaagcgcttataacataaacacttatcatttaagtgcttatggataagctatttctataacaaa 22388009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 28340567 - 28340509
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||||||||||||||| ||  |||||| || ||||  |||||||||||||||||||    
T  28340567 aattaagtgcttatagcattagtgtttatcgtacaagtattaatgtataagctatttct 28340509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 28844385 - 28844442
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttc 153  Q
    ||||||||| |||||||||||||  ||||  |||||||||| ||||||||| ||||||    
T  28844385 aattaagtgtttatagcataagcgcttattgtataagtgcttatgtataagatatttc 28844442  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 47003986 - 47004051
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttctgtaacaa 161  Q
    |||||||||||||||||| ||   ||||||||||||||| | || | |||||||||||| ||||||    
T  47003986 aattaagtgcttatagcaaaaatgtttatcatataagtgtttatatgtaagctatttctataacaa 47004051  T

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Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 43515452 - 43515480
Alignment:
Q  190 aaataagtcaatccaaacaaaacttatat 218  Q
    |||||||||||||||||||||||||||||    
T  43515452 aaataagtcaatccaaacaaaacttatat 43515480  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 46213728 - 46213768
Alignment:
Q  122 tatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    ||||||||||||||| ||||| ||||||||||| |||||||    
T  46213728 tatcatataagtgcttatgtaaaagctatttctataacaaa 46213768  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 34083 - 34025
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagtgctaatgtataagctatttct 154  Q
    ||||||| |||||||||||||| | | |||||||||||| | ||||| |||||||||||    
T  34083 aattaagagcttatagcataagatctgatcatataagtgattatgtagaagctatttct 34025  T

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Target: scaffold0654 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 6783 - 6742
Alignment:
Q  121 ttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||||||| |||||||| |||||||| |||||||    
T  6783 ttatcatataagtgcttatgtataaactatttctataacaaa 6742  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 133
Target Start/End: Complemental strand, 26212 - 26175
Alignment:
Q  96 aattaagtgcttatagcataagcttttatcatataagt 133  Q
    |||||||||||||||||||||||  |||||||||||||    
T  26212 aattaagtgcttatagcataagcacttatcatataagt 26175  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 116702 - 116661
Alignment:
Q  121 ttatcatataagtgctaatgtataagctatttctgtaacaaa 162  Q
    |||||||||||||||| |||||||| |||||||| |||||||    
T  116702 ttatcatataagtgcttatgtataaactatttctataacaaa 116661  T

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