View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20562_low_6 (Length: 551)

Name: NF20562_low_6
Description: NF20562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20562_low_6
NF20562_low_6
[»] scaffold0050 (4 HSPs)
scaffold0050 (360-532)||(72623-72795)
scaffold0050 (6-69)||(72533-72596)
scaffold0050 (495-532)||(72900-72937)
scaffold0050 (416-469)||(72802-72855)
[»] chr1 (38 HSPs)
chr1 (371-480)||(50503360-50503469)
chr1 (371-449)||(48798100-48798178)
chr1 (371-481)||(18915867-18915977)
chr1 (371-481)||(26325812-26325922)
chr1 (325-444)||(17642039-17642168)
chr1 (368-444)||(30927762-30927838)
chr1 (371-481)||(8763991-8764101)
chr1 (371-441)||(10336516-10336586)
chr1 (371-481)||(41663854-41663964)
chr1 (371-444)||(43959856-43959929)
chr1 (371-444)||(49078114-49078187)
chr1 (371-446)||(28324613-28324688)
chr1 (324-444)||(5855465-5855595)
chr1 (387-481)||(10507714-10507808)
chr1 (371-444)||(45361917-45361990)
chr1 (371-479)||(33004015-33004123)
chr1 (371-419)||(51437469-51437517)
chr1 (377-444)||(2980966-2981033)
chr1 (371-481)||(37339819-37339930)
chr1 (378-444)||(16263552-16263618)
chr1 (370-444)||(33498874-33498948)
chr1 (378-444)||(34697342-34697408)
chr1 (371-444)||(10422788-10422861)
chr1 (371-420)||(18649411-18649460)
chr1 (371-420)||(34334354-34334403)
chr1 (371-480)||(40288476-40288585)
chr1 (371-429)||(15238156-15238214)
chr1 (370-444)||(42710173-42710247)
chr1 (371-444)||(32871-32944)
chr1 (376-409)||(937556-937589)
chr1 (371-444)||(9659214-9659286)
chr1 (371-444)||(26660138-26660211)
chr1 (371-444)||(32142881-32142954)
chr1 (370-479)||(50371834-50371943)
chr1 (368-444)||(17092512-17092588)
chr1 (371-443)||(17358507-17358579)
chr1 (376-444)||(21849240-21849307)
chr1 (369-469)||(44969663-44969762)
[»] chr2 (34 HSPs)
chr2 (376-480)||(41031904-41032008)
chr2 (323-479)||(14169608-14169774)
chr2 (371-444)||(331500-331573)
chr2 (371-444)||(8410130-8410203)
chr2 (379-480)||(16325602-16325703)
chr2 (371-480)||(44139483-44139592)
chr2 (376-444)||(2528375-2528443)
chr2 (371-481)||(3811688-3811798)
chr2 (370-444)||(10026650-10026724)
chr2 (371-469)||(21286443-21286541)
chr2 (371-444)||(2550867-2550940)
chr2 (371-444)||(7747273-7747346)
chr2 (324-400)||(23500760-23500845)
chr2 (371-444)||(41220634-41220707)
chr2 (380-444)||(6358185-6358249)
chr2 (377-444)||(25540438-25540505)
chr2 (377-444)||(38005407-38005474)
chr2 (371-481)||(10823059-10823169)
chr2 (371-481)||(12455309-12455419)
chr2 (377-419)||(15079488-15079530)
chr2 (371-441)||(45263704-45263774)
chr2 (371-480)||(18902528-18902637)
chr2 (379-444)||(22593142-22593206)
chr2 (325-479)||(12864167-12864331)
chr2 (380-444)||(39201542-39201606)
chr2 (366-445)||(13026444-13026523)
chr2 (378-429)||(15234110-15234161)
chr2 (371-469)||(27725939-27726037)
chr2 (371-441)||(34356205-34356275)
chr2 (371-444)||(7787055-7787128)
chr2 (371-420)||(16034936-16034985)
chr2 (322-359)||(38005342-38005379)
chr2 (371-444)||(38962762-38962835)
chr2 (369-441)||(42770688-42770760)
[»] chr7 (28 HSPs)
chr7 (371-479)||(38578866-38578974)
chr7 (371-444)||(36619288-36619361)
chr7 (368-481)||(5069812-5069925)
chr7 (371-480)||(48804685-48804794)
chr7 (371-445)||(43862005-43862079)
chr7 (371-444)||(13095860-13095933)
chr7 (371-444)||(22973969-22974042)
chr7 (371-481)||(10047873-10047983)
chr7 (371-481)||(17748379-17748489)
chr7 (371-444)||(22993401-22993474)
chr7 (371-444)||(34659228-34659301)
chr7 (371-479)||(365142-365250)
chr7 (371-443)||(43925514-43925586)
chr7 (366-444)||(23658176-23658254)
chr7 (371-444)||(18785671-18785744)
chr7 (379-444)||(32823253-32823318)
chr7 (368-444)||(27028278-27028354)
chr7 (360-444)||(45960037-45960121)
chr7 (371-481)||(42210259-42210369)
chr7 (379-429)||(47341886-47341936)
chr7 (371-444)||(1797462-1797535)
chr7 (371-444)||(4973144-4973217)
chr7 (371-444)||(14650319-14650392)
chr7 (368-469)||(28396169-28396270)
chr7 (371-480)||(43346777-43346886)
chr7 (371-419)||(22268088-22268136)
chr7 (376-444)||(39474947-39475015)
chr7 (371-443)||(49142704-49142776)
[»] chr5 (35 HSPs)
chr5 (371-481)||(42086327-42086437)
chr5 (324-481)||(1538374-1538541)
chr5 (371-481)||(12705014-12705124)
chr5 (371-444)||(9805004-9805077)
chr5 (324-441)||(18136317-18136444)
chr5 (371-481)||(9812872-9812982)
chr5 (371-481)||(19572724-19572834)
chr5 (371-444)||(7308398-7308471)
chr5 (371-444)||(20525838-20525911)
chr5 (369-481)||(4016252-4016364)
chr5 (371-479)||(25417182-25417290)
chr5 (371-437)||(28857128-28857194)
chr5 (371-444)||(14588651-14588724)
chr5 (371-444)||(23247385-23247458)
chr5 (371-444)||(23383657-23383730)
chr5 (369-481)||(21375350-21375461)
chr5 (378-444)||(30995128-30995194)
chr5 (371-441)||(40117415-40117485)
chr5 (371-420)||(1899001-1899050)
chr5 (371-444)||(5731954-5732027)
chr5 (371-444)||(7866581-7866654)
chr5 (371-444)||(41800977-41801050)
chr5 (377-444)||(12081914-12081981)
chr5 (371-441)||(14152050-14152120)
chr5 (371-441)||(20682654-20682724)
chr5 (378-444)||(22655191-22655257)
chr5 (393-443)||(35245041-35245091)
chr5 (371-481)||(38897716-38897825)
chr5 (371-444)||(14974358-14974431)
chr5 (377-406)||(18045645-18045674)
chr5 (371-444)||(37263241-37263313)
chr5 (371-444)||(42291539-42291612)
chr5 (369-441)||(11845838-11845910)
chr5 (371-443)||(38369700-38369771)
chr5 (389-469)||(39099788-39099868)
[»] chr6 (22 HSPs)
chr6 (371-444)||(9147304-9147377)
chr6 (371-481)||(6606094-6606204)
chr6 (371-481)||(8611971-8612081)
chr6 (371-481)||(8932664-8932774)
chr6 (371-481)||(8944130-8944240)
chr6 (371-481)||(14107355-14107465)
chr6 (371-480)||(5253221-5253330)
chr6 (371-443)||(24671901-24671973)
chr6 (366-444)||(9179770-9179848)
chr6 (371-444)||(21898651-21898724)
chr6 (378-481)||(19089508-19089611)
chr6 (371-444)||(13036038-13036111)
chr6 (376-481)||(29444762-29444867)
chr6 (378-481)||(12635824-12635927)
chr6 (378-444)||(8938721-8938787)
chr6 (379-480)||(30410456-30410557)
chr6 (324-359)||(8938657-8938692)
chr6 (371-401)||(3030695-3030725)
chr6 (371-444)||(3587979-3588052)
chr6 (365-442)||(33859355-33859432)
chr6 (324-360)||(3030746-3030782)
chr6 (380-444)||(12606442-12606506)
[»] chr3 (42 HSPs)
chr3 (371-479)||(30767247-30767355)
chr3 (371-479)||(35315955-35316063)
chr3 (371-481)||(7310701-7310811)
chr3 (371-481)||(29127918-29128028)
chr3 (371-444)||(26207836-26207909)
chr3 (378-478)||(51682955-51683055)
chr3 (371-444)||(29135912-29135985)
chr3 (371-444)||(49198350-49198423)
chr3 (368-444)||(7328840-7328915)
chr3 (376-444)||(26043816-26043884)
chr3 (377-481)||(28572209-28572313)
chr3 (365-444)||(39849065-39849143)
chr3 (323-444)||(41630547-41630678)
chr3 (371-481)||(51060279-51060389)
chr3 (371-444)||(6462411-6462484)
chr3 (371-444)||(33251661-33251734)
chr3 (371-444)||(54261225-54261298)
chr3 (377-469)||(50405613-50405705)
chr3 (380-445)||(928608-928673)
chr3 (379-444)||(40944890-40944954)
chr3 (371-444)||(42412809-42412882)
chr3 (371-444)||(45402386-45402459)
chr3 (371-444)||(45877453-45877526)
chr3 (380-444)||(3755578-3755642)
chr3 (371-479)||(29762155-29762263)
chr3 (371-479)||(47471831-47471938)
chr3 (366-481)||(47749103-47749217)
chr3 (366-444)||(3507568-3507646)
chr3 (371-441)||(23511566-23511636)
chr3 (378-444)||(47219150-47219216)
chr3 (370-444)||(47303524-47303598)
chr3 (371-401)||(52011046-52011076)
chr3 (378-443)||(4638160-4638225)
chr3 (392-449)||(13367444-13367501)
chr3 (371-444)||(26362002-26362075)
chr3 (371-420)||(26590325-26590374)
chr3 (371-444)||(49543518-49543591)
chr3 (371-444)||(53649726-53649799)
chr3 (366-414)||(7139746-7139794)
chr3 (371-419)||(30045820-30045868)
chr3 (389-469)||(34374452-34374532)
chr3 (324-356)||(49198293-49198325)
[»] scaffold0291 (1 HSPs)
scaffold0291 (371-444)||(6857-6930)
[»] chr8 (25 HSPs)
chr8 (368-429)||(17981441-17981502)
chr8 (368-444)||(26570924-26571000)
chr8 (371-462)||(6042824-6042915)
chr8 (371-444)||(9860029-9860102)
chr8 (371-444)||(33401833-33401906)
chr8 (368-444)||(18374010-18374086)
chr8 (376-444)||(29933780-29933848)
chr8 (368-444)||(43032901-43032977)
chr8 (371-444)||(6100475-6100548)
chr8 (371-444)||(10927609-10927682)
chr8 (371-444)||(14666105-14666178)
chr8 (371-444)||(45521172-45521244)
chr8 (377-480)||(43027314-43027417)
chr8 (371-441)||(27975894-27975964)
chr8 (371-441)||(28033163-28033233)
chr8 (324-441)||(34846760-34846886)
chr8 (368-414)||(44031504-44031550)
chr8 (371-444)||(2467152-2467225)
chr8 (369-444)||(583815-583888)
chr8 (371-478)||(15884556-15884662)
chr8 (371-441)||(1013014-1013084)
chr8 (371-444)||(4479330-4479402)
chr8 (371-444)||(8141105-8141178)
chr8 (432-481)||(8803118-8803167)
chr8 (371-420)||(38922472-38922521)
[»] chr4 (31 HSPs)
chr4 (371-444)||(1446830-1446903)
chr4 (371-444)||(29895791-29895864)
chr4 (371-480)||(47078462-47078571)
chr4 (380-481)||(35359749-35359850)
chr4 (368-444)||(42722611-42722687)
chr4 (377-444)||(8064832-8064899)
chr4 (377-479)||(7246645-7246747)
chr4 (370-444)||(40780895-40780969)
chr4 (371-444)||(6779215-6779288)
chr4 (379-444)||(12703579-12703644)
chr4 (371-444)||(16450304-16450377)
chr4 (371-444)||(36145249-36145322)
chr4 (371-440)||(40272369-40272438)
chr4 (371-480)||(52950086-52950195)
chr4 (368-480)||(29588737-29588849)
chr4 (371-479)||(43468351-43468459)
chr4 (378-481)||(20421784-20421887)
chr4 (377-480)||(38166037-38166140)
chr4 (368-406)||(1940846-1940884)
chr4 (371-429)||(10541020-10541078)
chr4 (371-441)||(53599064-53599134)
chr4 (371-441)||(55921038-55921108)
chr4 (371-444)||(8889026-8889099)
chr4 (371-443)||(48015108-48015180)
chr4 (385-444)||(17080061-17080120)
chr4 (371-481)||(36262764-36262872)
chr4 (371-469)||(3159478-3159576)
chr4 (378-444)||(14124027-14124093)
chr4 (324-358)||(15829646-15829680)
chr4 (371-441)||(38075437-38075507)
chr4 (384-444)||(49260699-49260759)
[»] scaffold0029 (1 HSPs)
scaffold0029 (325-469)||(40990-41144)
[»] scaffold0086 (1 HSPs)
scaffold0086 (377-444)||(26191-26258)
[»] scaffold0016 (1 HSPs)
scaffold0016 (371-444)||(8735-8808)
[»] scaffold0002 (1 HSPs)
scaffold0002 (371-444)||(572-645)
[»] scaffold0006 (1 HSPs)
scaffold0006 (368-406)||(68516-68554)
[»] scaffold0170 (1 HSPs)
scaffold0170 (371-444)||(9847-9920)
[»] scaffold0010 (1 HSPs)
scaffold0010 (380-481)||(155708-155809)
[»] scaffold0005 (1 HSPs)
scaffold0005 (371-444)||(271108-271181)
[»] scaffold0209 (1 HSPs)
scaffold0209 (369-444)||(12575-12648)
[»] scaffold0024 (1 HSPs)
scaffold0024 (380-420)||(149396-149436)
[»] scaffold0009 (2 HSPs)
scaffold0009 (371-479)||(42831-42939)
scaffold0009 (371-412)||(9438-9479)
[»] scaffold0376 (1 HSPs)
scaffold0376 (371-444)||(12672-12745)
[»] scaffold0116 (1 HSPs)
scaffold0116 (373-469)||(17394-17490)


Alignment Details
Target: scaffold0050 (Bit Score: 92; Significance: 2e-44; HSPs: 4)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 360 - 532
Target Start/End: Original strand, 72623 - 72795
Alignment:
Q  360 acgtatcaggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgg 459  Q
    |||||||||| |||| ||||||||||| ||| |||||||||| ||||||||||| |||||| |||| |||||||||||||||||| ||||||| ||||||    
T  72623 acgtatcagggaataccgggttcgatttccaaggggaacaacgcttgaccagtgcgcatgcctcaaagcataagccggattagtcgcctatcaagggtgg 72722  T
Q  460 gtcggaaaccaatgcgaaagccnnnnnnngtaaaattgacataaagatggatggcatacttaaaactcagaga 532  Q
     || ||||||  | ||||||||       ||||||||||||||||||||||||||||||||||||||||||||    
T  72723 atctgaaaccggtacgaaagccaaaaaaagtaaaattgacataaagatggatggcatacttaaaactcagaga 72795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 72533 - 72596
Alignment:
Q  6 agtgagatgaacagcttcaagaaattataacattttatgtaaaaaatttcatcaagtaatgggg 69  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  72533 agtgacatgaacagcttcaagaaattataacatttcatgtaaaaattgtcatcaagtaatgggg 72596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 495 - 532
Target Start/End: Original strand, 72900 - 72937
Alignment:
Q  495 ttgacataaagatggatggcatacttaaaactcagaga 532  Q
    ||||||||||||||||||||||||||||||||||||||    
T  72900 ttgacataaagatggatggcatacttaaaactcagaga 72937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 72802 - 72855
Alignment:
Q  416 catgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacc 469  Q
    ||||| ||||||||| ||||||||||||| |||| ||| ||||||||| |||||    
T  72802 catgcctcaacgcatgagccggattagtcgcctaccacaggtgggtcgaaaacc 72855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 4e-24; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 371 - 480
Target Start/End: Complemental strand, 50503469 - 50503360
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||| || |||||  ||||||||| ||| || | ||  |||||||||||||||     
T  50503469 aatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagccggatttgtcgcccaccaatggtgggtcggaaaccg 50503370  T
Q  471 atgcgaaagc 480  Q
    ||||||||||    
T  50503369 atgcgaaagc 50503360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 371 - 449
Target Start/End: Complemental strand, 48798178 - 48798100
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcaccta 449  Q
    |||||||||||||||| |||||||||||||| |||||| |||| |||||| || |||||| ||||||||||||||||||    
T  48798178 aatatcgggttcgatttccagggggaacaacgcttgactagtgcgcatgcctctacgcatgagccggattagtcaccta 48798100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 18915867 - 18915977
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||||||| || |||||  ||||||||||||| |  | ||  ||||||| |||||||     
T  18915867 aataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgctcaccattggtgggttggaaaccg 18915966  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  18915967 gtgcgaaagcc 18915977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 26325812 - 26325922
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    ||||||||||||||||||||| ||||||||| ||||  ||||| |||||| || |||||| |||||||||||||  | | ||  |||||||||||||||     
T  26325812 aatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 26325911  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  26325912 gtgcgaaagcc 26325922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 325 - 444
Target Start/End: Complemental strand, 17642168 - 17642039
Alignment:
Q  325 aaccaagttgtttgggctccggtgacaaggagctc---------acgtatc-aggaaatatcgggttcgattcccagggggaacaacccttgaccagtgt 414  Q
    |||||||||||||||||||| ||||||||||||||         ||||| | ||||||||  ||||||||||||||||||||||||| |||| ||||||     
T  17642168 aaccaagttgtttgggctccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgc 17642069  T
Q  415 gcatgcttcaacgcataagccggattagtc 444  Q
    |||||| || |||||  |||||||||||||    
T  17642068 gcatgcctctacgcacgagccggattagtc 17642039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 444
Target Start/End: Complemental strand, 30927838 - 30927762
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||||| |||| ||||||||| |||| ||| ||||||||| || |||||| |||||||||||||    
T  30927838 ggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcatgagccggattagtc 30927762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 8763991 - 8764101
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    ||||||||||||| ||||||||||||||||| |||| |||||| |||||| || |||||  |||||||||||||  | | |   |||||||||||||||     
T  8763991 aatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccg 8764090  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  8764091 gtgcgaaagcc 8764101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 10336516 - 10336586
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    ||||||||||||||||  ||||||||||||| ||||||||||| |||||| || |||||| ||||||||||    
T  10336516 aatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggatta 10336586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 41663964 - 41663854
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||||||||||||||||||||||| ||||  ||||| |||||| || |||||| ||| |||||||||  | | ||  |||||||||||||||     
T  41663964 aataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccg 41663865  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  41663864 gtgcgaaagcc 41663854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 43959929 - 43959856
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||| |||||||||||||||||| |||| |||||| |||||| || |||||  |||||||||||||    
T  43959929 aatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtc 43959856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 49078114 - 49078187
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||||||||| |||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  49078114 aataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 49078187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 446
Target Start/End: Complemental strand, 28324688 - 28324613
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcac 446  Q
    ||||||||||||||||||| |||| |||||| ||||  ||||| |||||| || |||||| |||||||||||||||    
T  28324688 aatatcgggttcgattccccggggaaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcac 28324613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 324 - 444
Target Start/End: Original strand, 5855465 - 5855595
Alignment:
Q  324 taaccaagttgtttgggctccggtgacaaggagctc---------acgtat-caggaaatatcgggttcgattcccagggggaacaacccttgaccagtg 413  Q
    ||||||||||||||||||||| ||| ||||||||||         |||||| | || |||| ||||||||||||||||| |||||||| |||| ||||||    
T  5855465 taaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtg 5855564  T
Q  414 tgcatgcttcaacgcataagccggattagtc 444  Q
     |||||| || |||||| || ||||||||||    
T  5855565 cgcatgcctctacgcatgaggcggattagtc 5855595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 387 - 481
Target Start/End: Original strand, 10507714 - 10507808
Alignment:
Q  387 cccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcgaaagcc 481  Q
    |||||| ||||||||  ||| ||||||||||| | || |||||| |||||||||||||  | | ||| |||||||||||||||||| ||||||||    
T  10507714 cccaggaggaacaacgtttggccagtgtgcatacctctacgcatgagccggattagtcgtccaccactggtgggtcggaaaccaattcgaaagcc 10507808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 45361990 - 45361917
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||| |||| |||||||| |||| |||||| ||||||  | ||||||||||||||||||||    
T  45361990 aataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataagccggattagtc 45361917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 33004123 - 33004015
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||||||| ||||||| ||||||| |||||  |||| |||||| |||||| || |||||  |||||||||||||||| | ||  ||||||||| |||||     
T  33004123 aatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctctacgcacgagccggattagtcacccaccaatggtgggtcgaaaaccg 33004024  T
Q  471 atgcgaaag 479  Q
     ||||||||    
T  33004023 gtgcgaaag 33004015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 51437469 - 51437517
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatg 419  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  51437469 aatatcgggttcgattcccatggggaacaacgcttgaccagtgcgcatg 51437517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 377 - 444
Target Start/End: Complemental strand, 2981033 - 2980966
Alignment:
Q  377 gggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||| || |||||  || ||||||||||    
T  2981033 gggttcgattcccagcgggaacaacacttggccagtgtgcatgcctctacgcacgagtcggattagtc 2980966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 37339819 - 37339930
Alignment:
Q  371 aatatcgggttcgattcccaggggga-acaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacc 469  Q
    |||| ||||||||||||||||||||  ||||| |||| |||||| |||||| ||||||||  ||||||||||||| || | |   ||||||| |||||||    
T  37339819 aataccgggttcgattcccagggggggacaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgcccacctttggtgggttggaaacc 37339918  T
Q  470 aatgcgaaagcc 481  Q
      ||||||||||    
T  37339919 ggtgcgaaagcc 37339930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 444
Target Start/End: Original strand, 16263552 - 16263618
Alignment:
Q  378 ggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||| ||||| |||||||| |||| |||||| |||||| || |||||||||||||| |||||    
T  16263552 ggttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcataagccggaatagtc 16263618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 33498948 - 33498874
Alignment:
Q  370 aaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||| |||||||||||| |||| ||| |||| |||| |||||| |||||| || |||||| |||||||||||||    
T  33498948 aaataccgggttcgattctcaggaggagcaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 33498874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 444
Target Start/End: Original strand, 34697342 - 34697408
Alignment:
Q  378 ggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||  |||||||||||| |||| | ||||||||||| || |||||| |||||||||||||    
T  34697342 ggttcgattcttagggggaacaacacttggctagtgtgcatgcctctacgcatgagccggattagtc 34697408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 10422788 - 10422861
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||| | ||| |||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  10422788 aataccgggttcgatttctaggaggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 10422861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 420
Target Start/End: Complemental strand, 18649460 - 18649411
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgc 420  Q
    ||||||||||||||||  ||||||||||||| ||||||||||| ||||||    
T  18649460 aatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgc 18649411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 420
Target Start/End: Complemental strand, 34334403 - 34334354
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgc 420  Q
    |||| |||||||||||||||||||||||||| |||| |||||| ||||||    
T  34334403 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgc 34334354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 480
Target Start/End: Complemental strand, 40288585 - 40288476
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||||||||||| ||||||||||||||  ||| ||||| ||||||| || || ||  ||||||||||||| |  |||   ||||||||||||||||    
T  40288585 aataccgggttcgatttccagggggaacaacggttggccagtatgcatgcctctacacacgagccggattagtcgctcatccttggtgggtcggaaacca 40288486  T
Q  471 atgcgaaagc 480  Q
     ||| |||||    
T  40288485 gtgcaaaagc 40288476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 15238214 - 15238156
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgca 429  Q
    |||||||||||||||||||||||||| |||| |||| ||| || |||||| || |||||    
T  15238214 aatatcgggttcgattcccagggggagcaacgcttggccaatgagcatgcctctacgca 15238156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 42710247 - 42710173
Alignment:
Q  370 aaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||  |||||| |||||  |||| |||||| |||||| || |||||||| ||| |||||||    
T  42710247 aaatatcgggttcgattttcaggggaaacaatacttggccagtgcgcatgcctctacgcataaaccgaattagtc 42710173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 32871 - 32944
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||| ||||||||||| |||||||| ||||  |||||  ||||| || |||||| ||||| |||||||    
T  32871 aatatcgggtccgattcccaggaggaacaacgcttggtcagtgcacatgcctctacgcatgagccgaattagtc 32944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 409
Target Start/End: Complemental strand, 937589 - 937556
Alignment:
Q  376 cgggttcgattcccagggggaacaacccttgacc 409  Q
    |||||||||||||||||||||||||| |||||||    
T  937589 cgggttcgattcccagggggaacaacgcttgacc 937556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 9659286 - 9659214
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||||||||| ||||||  ||||| |||| |||||| |  |||||| |||||||||||||    
T  9659286 aataccgggttcgattcccagggg-aacaacgtttgactagtgcgcatgcctttacgcatgagccggattagtc 9659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 26660138 - 26660211
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||| ||| ||||||||||  |||| ||||  |||||| || |||||| |||||||||||||    
T  26660138 aataccgggttcgatttccacggggaacaacatttgatcagtacgcatgcctctacgcatgagccggattagtc 26660211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 32142954 - 32142881
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||  ||||||||||||| |||| |||||| |||||| |  |||||| ||||| |||||||    
T  32142954 aataccgggttcgattttcagggggaacaacacttggccagtgcgcatgcctttacgcatgagccgaattagtc 32142881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 370 - 479
Target Start/End: Complemental strand, 50371943 - 50371834
Alignment:
Q  370 aaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacc 469  Q
    ||||| || ||||||||  ||||  ||||||| |||| |||||  ||||||||| ||||| |||||||||||||| || |||   ||||| |||||||||    
T  50371943 aaatagcgtgttcgattttcaggaagaacaacgcttggccagtacgcatgcttctacgcacaagccggattagtcgcccatctttggtggatcggaaacc 50371844  T
Q  470 aatgcgaaag 479  Q
      ||||||||    
T  50371843 ggtgcgaaag 50371834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 368 - 444
Target Start/End: Complemental strand, 17092588 - 17092512
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||| ||||||||  |||||| ||||||  ||| |||||||| |||| || |||||  |||||||||||||    
T  17092588 ggaaatatcgagttcgattttcaggggaaacaacgattggccagtgtgtatgcctctacgcacgagccggattagtc 17092512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 443
Target Start/End: Complemental strand, 17358579 - 17358507
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagt 443  Q
    |||| |||||||||||| ||||| ||||||| |||||||| || |||||| |  |||||| |||| |||||||    
T  17358579 aataccgggttcgattctcagggagaacaacgcttgaccaatgcgcatgcctttacgcatgagcccgattagt 17358507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 444
Target Start/End: Complemental strand, 21849307 - 21849240
Alignment:
Q  376 cgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||||| |||||| |||| | |||| |||||| || |||||  |||||||||||||    
T  21849307 cgggttcgattcccagggg-aacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtc 21849240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 469
Target Start/End: Original strand, 44969663 - 44969762
Alignment:
Q  369 gaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaac 468  Q
    |||||| | |||||||||| |||| | |||||| |||| |||||||||||||  | |||||| |||||||||||||  | ||||  ||||| ||||||||    
T  44969663 gaaataccaggttcgattctcaggag-aacaacgcttggccagtgtgcatgcccctacgcatgagccggattagtcgtccatcattggtggatcggaaac 44969761  T

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Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 376 - 480
Target Start/End: Complemental strand, 41032008 - 41031904
Alignment:
Q  376 cgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcg 475  Q
    |||||||||||||||||||||||||| |||| ||||||||||||| || |||||  |||||||||||||||| | |   |||||||||||||||| ||||    
T  41032008 cgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcg 41031909  T
Q  476 aaagc 480  Q
    |||||    
T  41031908 aaagc 41031904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 323 - 479
Target Start/End: Complemental strand, 14169774 - 14169608
Alignment:
Q  323 ataaccaagttgtttgggctccggtgacaaggagctc---------acgtat-caggaaatatcgggttcgattcccagggggaacaacccttgaccagt 412  Q
    |||||||||||||||||||||| ||||||||||| ||         |||||| | || ||||||||||||||||| | ||||||||||| ||||||||||    
T  14169774 ataaccaagttgtttgggctccagtgacaaggagatctttccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagt 14169675  T
Q  413 gtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcgaaag 479  Q
    | |||||  || |||||| |||||||||||||  ||| ||  |||||||||||||||  ||||||||    
T  14169674 gcgcatgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcgaaag 14169608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 331500 - 331573
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||||||||||||||||| |||| |||||| ||||||||| |||||| |||||||||||||    
T  331500 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttctacgcatgagccggattagtc 331573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 8410130 - 8410203
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||||| || |||||  |||||||||||||    
T  8410130 aatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 8410203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 379 - 480
Target Start/End: Original strand, 16325602 - 16325703
Alignment:
Q  379 gttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcgaaa 478  Q
    ||||||||||||||||||||||| |||| ||||||||||||| || |||||| |||| ||||||||  | | ||  |||||||||||||||  |||||||    
T  16325602 gttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaa 16325701  T
Q  479 gc 480  Q
    ||    
T  16325702 gc 16325703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 371 - 480
Target Start/End: Original strand, 44139483 - 44139592
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||||||||||||||||||||||| |||| |||||| || ||| || |||||  ||||||||||||| || | ||  |||||||||||||||     
T  44139483 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccaccaatggtgggtcggaaaccg 44139582  T
Q  471 atgcgaaagc 480  Q
     |||||||||    
T  44139583 gtgcgaaagc 44139592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 376 - 444
Target Start/End: Complemental strand, 2528443 - 2528375
Alignment:
Q  376 cgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||||||||||| ||||  |||||||||||| || || |||||||||||||||||    
T  2528443 cgggttcgattcccagggggaacaacgcttggtcagtgtgcatgcctctacacataagccggattagtc 2528375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 3811798 - 3811688
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    ||||||||||||||||||||| ||||||||| ||||  || || |||||| || |||||| |||||||||| || || | |   |||||||| ||||||     
T  3811798 aatatcgggttcgattcccagagggaacaacacttggtcaatgcgcatgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaaccg 3811699  T
Q  471 atgcgaaagcc 481  Q
    |||||||||||    
T  3811698 atgcgaaagcc 3811688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 10026724 - 10026650
Alignment:
Q  370 aaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||| |||||||||||| |||||||||||||  ||| |||||| |||||| || |||||| |||||||||||||    
T  10026724 aaataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtc 10026650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 469
Target Start/End: Original strand, 21286443 - 21286541
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacc 469  Q
    |||| ||||||||||||||||| | |||||| ||||||||||| |||||| || |||||  ||| |||||||||||  ||||  ||||||| |||||||    
T  21286443 aataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcatgcctctacgcacgagctggattagtcactcatcattggtgggttggaaacc 21286541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 2550867 - 2550940
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||||||| |||||||| |||  |||||| |||||  || |||||| |||||||||||||    
T  2550867 aatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctctacgcatgagccggattagtc 2550940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 7747273 - 7747346
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||| ||| ||||||||  ||| ||||||||||||| || |||||| |||||||||||||    
T  7747273 aataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtc 7747346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 400
Target Start/End: Complemental strand, 23500845 - 23500760
Alignment:
Q  324 taaccaagttgtttgggctccggtgacaaggagctc---------acgtatcaggaaatatcgggttcgattcccagggggaacaa 400  Q
    ||||||||||||||||||||||||| ||||||||||         ||||||| || |||||||||||||||||||||| |||||||    
T  23500845 taaccaagttgtttgggctccggtggcaaggagctccttccaaagacgtatcggggaatatcgggttcgattcccaggaggaacaa 23500760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 41220634 - 41220707
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||||||| |||||||| |||| |||||| |||||| || |||||| ||||| |||||||    
T  41220634 aataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattagtc 41220707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 444
Target Start/End: Complemental strand, 6358249 - 6358185
Alignment:
Q  380 ttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||| |||||||||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  6358249 ttcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 6358185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 377 - 444
Target Start/End: Complemental strand, 25540505 - 25540438
Alignment:
Q  377 gggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||| |||||||||||| |||| |||||| |||||| || |||||  |||||||||||||    
T  25540505 gggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtc 25540438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 377 - 444
Target Start/End: Original strand, 38005407 - 38005474
Alignment:
Q  377 gggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||| |||||||||| |||| |||||| |||||| || || ||| |||||||||||||    
T  38005407 gggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctctacacatgagccggattagtc 38005474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 10823059 - 10823169
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||| |||||||||| |||||||| |||| |||||| |||||| || |||||  ||||||||||||| || | |    ||||||||||||||     
T  10823059 aataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttttgtgggtcggaaaccg 10823158  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  10823159 gtgcgaaagcc 10823169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 12455309 - 12455419
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||||||||||| ||||||| |||||| |||  |||||| |||||| || |||||  ||||||||||||| |  | ||  |||||||||||||||     
T  12455309 aataccgggttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccg 12455408  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  12455409 gtgcgaaagcc 12455419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 419
Target Start/End: Original strand, 15079488 - 15079530
Alignment:
Q  377 gggttcgattcccagggggaacaacccttgaccagtgtgcatg 419  Q
    |||||||||| |||||||||||||| |||||||||||||||||    
T  15079488 gggttcgatttccagggggaacaacgcttgaccagtgtgcatg 15079530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 441
Target Start/End: Complemental strand, 45263774 - 45263704
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    |||| |||||||||||||||| ||||||||| |||| |||||| |||||| || |||||  ||||||||||    
T  45263774 aataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctctacgcacgagccggatta 45263704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 480
Target Start/End: Complemental strand, 18902637 - 18902528
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||||||||||||||| |||||||||| ||||||||||| || ||  || |||||  |||| |||||||| || | |   |||||||||||||||     
T  18902637 aataccgggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccg 18902538  T
Q  471 atgcgaaagc 480  Q
     |||||||||    
T  18902537 gtgcgaaagc 18902528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 379 - 444
Target Start/End: Original strand, 22593142 - 22593206
Alignment:
Q  379 gttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||||||| | ||| |||||| |||||| || |||||| |||||||||||||    
T  22593142 gttcgattcccagggggaacaa-cgttggccagtgcgcatgcctctacgcatgagccggattagtc 22593206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 479
Target Start/End: Original strand, 12864167 - 12864331
Alignment:
Q  325 aaccaagttgtttgggctccggtgacaaggagctc---------acgta-tcaggaaatatcgggttcgattcccagggggaacaacccttgaccagtgt 414  Q
    |||||||||||||||||||| ||||||||||||||         ||||| || || |||| ||| ||||||| |||||||||||||| ||||  |||||     
T  12864167 aaccaagttgtttgggctccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgc 12864266  T
Q  415 gcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcgaaag 479  Q
    |||||| ||  ||||| |||| ||||||||  | | ||  |||||||||||||||  ||||||||    
T  12864267 gcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcgaaag 12864331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 444
Target Start/End: Complemental strand, 39201606 - 39201542
Alignment:
Q  380 ttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||| ||||||||||||   ||| ||||||||||||| || |||||| |||||||||||||    
T  39201606 ttcgattctcagggggaacaatgtttggccagtgtgcatgcctctacgcatgagccggattagtc 39201542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 445
Target Start/End: Complemental strand, 13026523 - 13026444
Alignment:
Q  366 caggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtca 445  Q
    |||| ||||||||||||||||  |||| |||||||   ||| |||||| |||||| || |||||| ||||||||||||||    
T  13026523 cagggaatatcgggttcgattatcaggaggaacaatgattggccagtgcgcatgcctctacgcatgagccggattagtca 13026444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 429
Target Start/End: Complemental strand, 15234161 - 15234110
Alignment:
Q  378 ggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgca 429  Q
    |||||||||| ||||||||||||| ||||||||||| |||||| || |||||    
T  15234161 ggttcgattctcagggggaacaacacttgaccagtgcgcatgcctctacgca 15234110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 469
Target Start/End: Original strand, 27725939 - 27726037
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacc 469  Q
    ||||||| ||| ||||| |||| |||||||  |||| |||||| |||||| || |||||  ||||||||||||| || | ||  |||||||||||||||    
T  27725939 aatatcgagtttgattctcaggaggaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtcggaaacc 27726037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 34356205 - 34356275
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    |||| ||||||||||| |||||||||||||| ||||  ||||| |||||| || | |||| ||||||||||    
T  34356205 aataccgggttcgatttccagggggaacaacacttggtcagtgcgcatgcctctatgcatgagccggatta 34356275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 7787055 - 7787128
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||| |||||||||||||  |||| |||||  |||||| || |||||  |||||||||||||    
T  7787055 aataccgggttcgatttccagggggaacaatacttggccagtacgcatgcctctacgcacgagccggattagtc 7787128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 420
Target Start/End: Original strand, 16034936 - 16034985
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgc 420  Q
    |||| |||||||||||  |||| |||||||| ||||||||||||||||||    
T  16034936 aataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgc 16034985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 359
Target Start/End: Original strand, 38005342 - 38005379
Alignment:
Q  322 gataaccaagttgtttgggctccggtgacaaggagctc 359  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  38005342 gataaccaagttgtttgggctccagtggcaaggagctc 38005379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 38962762 - 38962835
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||  |||| |||||||| |||| |||||| |||||| || |||||| | |||||||||||    
T  38962762 aataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaaccggattagtc 38962835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 441
Target Start/End: Complemental strand, 42770760 - 42770688
Alignment:
Q  369 gaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    |||||| ||||||| |||| ||||||||||||| |||| |||||| |||||| ||  ||||  ||||||||||    
T  42770760 gaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatgcctcttcgcacgagccggatta 42770688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 4e-21; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 38578974 - 38578866
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||||| || |||||| ||||||||||||| || | |   |||||||||||||||     
T  38578974 aatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccg 38578875  T
Q  471 atgcgaaag 479  Q
     ||||||||    
T  38578874 gtgcgaaag 38578866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 36619361 - 36619288
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||||||| || |||||| |||||||||||||    
T  36619361 aataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagccggattagtc 36619288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 368 - 481
Target Start/End: Complemental strand, 5069925 - 5069812
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaa 467  Q
    ||||||| ||||||||||| ||||| |||||||| |||  | ||||||||||| || ||||| |||||||||||||| || | |   |||||||||||||    
T  5069925 ggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgcatgcctctacgcacaagccggattagtcgcccacctttggtgggtcggaaa 5069826  T
Q  468 ccaatgcgaaagcc 481  Q
    || |||||||||||    
T  5069825 ccgatgcgaaagcc 5069812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 371 - 480
Target Start/End: Original strand, 48804685 - 48804794
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||||||||||||||| |||||||||| |||| |||||| |||||| || |||||| |||||||||||||  | | ||  |||||||||||||||     
T  48804685 aataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 48804784  T
Q  471 atgcgaaagc 480  Q
     |||||||||    
T  48804785 gtgcgaaagc 48804794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 445
Target Start/End: Complemental strand, 43862079 - 43862005
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtca 445  Q
    |||| ||||||||||||||||||||||||||  ||| |||||| |||||| || |||||| ||||||||||||||    
T  43862079 aataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtca 43862005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 13095860 - 13095933
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||| |||||||||||||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  13095860 aataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 13095933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 22973969 - 22974042
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||| ||||||||||||| |||| ||||||||||||| || |||||| |||| ||||||||    
T  22973969 aataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtc 22974042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 10047983 - 10047873
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||||||||||||||||||||||| |||| |||||| ||| || || |||||| ||| | |||||||  | | ||  |||||||||||||||     
T  10047983 aataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccg 10047884  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  10047883 gtgcgaaagcc 10047873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 17748489 - 17748379
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||||||||||||||||||||||| |||| |||||| |||||| || ||| |  |||||||||||||  | | |   | |||||||||||||     
T  17748489 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccacctttgttgggtcggaaaccg 17748390  T
Q  471 atgcgaaagcc 481  Q
    |||||||||||    
T  17748389 atgcgaaagcc 17748379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 22993474 - 22993401
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||| ||| |||||||| |||| ||||||||||||| || |||||  | |||||||||||    
T  22993474 aatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtc 22993401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 34659228 - 34659301
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||| || |||||||||| ||||||||||| |||||| || |||||  |||||||||||||    
T  34659228 aataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctctacgcacgagccggattagtc 34659301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 479
Target Start/End: Original strand, 365142 - 365250
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||||||||| |||| |||||||| ||| | ||||| |||||| || |||||| |||| ||||||| ||| | ||  ||||||||| |||||     
T  365142 aataccgggttcgattcacaggaggaacaacgcttaatcagtgcgcatgcctctacgcatgagcctgattagtgacccaccagtggtgggtcgaaaaccg 365241  T
Q  471 atgcgaaag 479  Q
    |||||||||    
T  365242 atgcgaaag 365250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 443
Target Start/End: Original strand, 43925514 - 43925586
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagt 443  Q
    |||| |||||||||||||||||||||||||| ||||  ||||| |||||| || |||||| ||| ||||||||    
T  43925514 aataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagt 43925586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 444
Target Start/End: Original strand, 23658176 - 23658254
Alignment:
Q  366 caggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||  |||||||| |||||||||||||| |||| ||||||||||||| || || ||  |||||||||||||    
T  23658176 cagggaatatccagttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtc 23658254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 18785671 - 18785744
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||| |||||||||||| |||| |||||| |||||| || |||||| | | |||||||||    
T  18785671 aataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgaactggattagtc 18785744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 379 - 444
Target Start/End: Original strand, 32823253 - 32823318
Alignment:
Q  379 gttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||||||||| |||| || ||||| |||| || |||||  |||||||||||||    
T  32823253 gttcgattcccagggggaacaacacttggccggtgtgtatgcctctacgcacgagccggattagtc 32823318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 444
Target Start/End: Original strand, 27028278 - 27028354
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||| | ||||||||| |||||||||||||| |||| |||||| |||||| || || ||| ||| |||||||||    
T  27028278 ggaaataccaggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacacatgagctggattagtc 27028354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 444
Target Start/End: Complemental strand, 45960121 - 45960037
Alignment:
Q  360 acgtatcaggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||| || |||| || ||| |||||||| ||| |||||| ||||  ||||| |||||| || ||||||||||||||||||||    
T  45960121 acgtatcggggaataccgagtttgattcccaagggcaacaacacttggtcagtgcgcatgcctctacgcataagccggattagtc 45960037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 42210369 - 42210259
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||| |||||||||||| |  ||||||  ||| |||||| |||||| || |||||  |||||||||| ||||| | |   |||||||||||||||     
T  42210369 aataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcacgagccggattaatcacccaccgttggtgggtcggaaaccg 42210270  T
Q  471 atgcgaaagcc 481  Q
    |||||||||||    
T  42210269 atgcgaaagcc 42210259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 47341886 - 47341936
Alignment:
Q  379 gttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgca 429  Q
    ||||||||||||||||||||||| |||| |||||| |||||| || |||||    
T  47341886 gttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgca 47341936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 1797462 - 1797535
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||||||||| |||||| |||| |||||| |||||  || |||||  ||||||| |||||    
T  1797462 aataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctctacgcacgagccggactagtc 1797535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 4973217 - 4973144
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||| | |||||| ||| |||||||| || |||||| || ||| |  |||||||||||||    
T  4973217 aatatcgggttcgattcctacggggaataacacttgaccaatgcgcatgcctctacgtacgagccggattagtc 4973144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 14650319 - 14650392
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||| ||||| |||||||  |||||||||||   |||| || |||||| |||||| ||||||    
T  14650319 aatatcgggttcgatttccaggaggaacaatgcttgaccagtgcatatgcctctacgcatgagccgggttagtc 14650392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 28396270 - 28396169
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaa 467  Q
    ||||||||||||||| |||| ||||||||||||| |||  |  ||| |||||| |  |||||| |||||||||||||  ||| |   |||||||||||||    
T  28396270 ggaaatatcgggttcaattctcagggggaacaacgcttagctggtgcgcatgcctttacgcatgagccggattagtcgtctacctttggtgggtcggaaa 28396171  T
Q  468 cc 469  Q
    ||    
T  28396170 cc 28396169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 480
Target Start/End: Complemental strand, 43346886 - 43346777
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||||||| |||| || |||||||||| |||| || ||| |||||| || ||| |  ||||||||||||| |  |||   ||||||||||||||||    
T  43346886 aataccgggttcaattctcaaggggaacaacacttggccggtgcgcatgcctctacgtacgagccggattagtcgctcatctttggtgggtcggaaacca 43346787  T
Q  471 atgcgaaagc 480  Q
     |||||||||    
T  43346786 gtgcgaaagc 43346777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 22268136 - 22268088
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatg 419  Q
    |||| ||||||||||||||||||||||||||  ||| |||||| |||||    
T  22268136 aataccgggttcgattcccagggggaacaacatttggccagtgcgcatg 22268088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 444
Target Start/End: Original strand, 39474947 - 39475015
Alignment:
Q  376 cgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||| | |||||||||| ||||  ||||| |||| | || |||||| |||||||||||||    
T  39474947 cgggttcgattcctatggggaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtc 39475015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 443
Target Start/End: Complemental strand, 49142776 - 49142704
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagt 443  Q
    |||| ||||||||||||| |||||||||||| |||  ||||||  ||||| || |||||  ||||||||||||    
T  49142776 aataccgggttcgattcctagggggaacaacgcttagccagtgcacatgcctctacgcacgagccggattagt 49142704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 6e-20; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 42086327 - 42086437
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||| || |||||| |||||||||||||  | | |   |||||||||||||||     
T  42086327 aataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccg 42086426  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  42086427 gtgcgaaagcc 42086437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 324 - 481
Target Start/End: Original strand, 1538374 - 1538541
Alignment:
Q  324 taaccaagttgtttgggctccggtgacaaggagctc---------acgtat-caggaaatatcgggttcgattcccagggggaacaacccttgaccagtg 413  Q
    ||||||||||||||||||||| ||| ||||||||||         |||||| | || |||| |||||||||||||||||||||||||| |||| ||||||    
T  1538374 taaccaagttgtttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtg 1538473  T
Q  414 tgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcgaaagcc 481  Q
     |||||| || |||||| |||||||||| ||  | | ||  |||||||||||||||  ||||||||||    
T  1538474 cgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcgaaagcc 1538541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 12705014 - 12705124
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||||||||||||| ||| |||||||| ||||||||||||||||||||| |||||| | ||||||||||| || | |   |||||||| ||||||     
T  12705014 aataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccg 12705113  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  12705114 gtgcgaaagcc 12705124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 9805004 - 9805077
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||||||||||||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  9805004 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 9805077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 324 - 441
Target Start/End: Complemental strand, 18136444 - 18136317
Alignment:
Q  324 taaccaagttgtttgggctccggtgacaaggagctc---------acgtatcagga-aatatcgggttcgattcccagggggaacaacccttgaccagtg 413  Q
    ||||||||||||||||||||| ||| ||||||||||         ||||||| ||| |||| |||||||||||||||||||||||||| ||||  |||||    
T  18136444 taaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtg 18136345  T
Q  414 tgcatgcttcaacgcataagccggatta 441  Q
    ||||||| || || ||| ||||||||||    
T  18136344 tgcatgcctctacacatgagccggatta 18136317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 9812872 - 9812982
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||||||||||||| ||| |||||||| |||| |||||||||||||||| |||||| | ||||||||||| || | |   |||||||| ||||||     
T  9812872 aataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccg 9812971  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  9812972 gtgcgaaagcc 9812982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 19572724 - 19572834
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||| ||||||||||||||||||| |||| |||||| |||||| || |||||| |||||||||||||    | ||  ||||||| ||||||||    
T  19572724 aataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtgggttggaaacca 19572823  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  19572824 gtgcgaaagcc 19572834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 7308471 - 7308398
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||||||||||||||||| ||||  |||||  ||||| || |||||| |||||||||||||    
T  7308471 aatatcgggttcgattcccagggggaacaacgcttgggcagtgcacatgcctctacgcatgagccggattagtc 7308398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 20525838 - 20525911
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||||||| |||||||| |||  |||||| |||||| || |||||| |||||||||||||    
T  20525838 aatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctctacgcatgagccggattagtc 20525911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 369 - 481
Target Start/End: Complemental strand, 4016364 - 4016252
Alignment:
Q  369 gaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaac 468  Q
    ||||||||||||||||||  ||||||||||||| |||| |||||| |||||| || || ||  ||||||||||||  |  | ||  ||||||||||||||    
T  4016364 gaaatatcgggttcgattatcagggggaacaacacttggccagtgcgcatgcctctacacacgagccggattagttgctcaccattggtgggtcggaaac 4016265  T
Q  469 caatgcgaaagcc 481  Q
    || ||||||||||    
T  4016264 cagtgcgaaagcc 4016252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 25417290 - 25417182
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||||||||||||||||||||||| |||| |||||| |||||| || ||| |  ||||||||||||||  || ||  |||||||| ||||||     
T  25417290 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaacgagccggattagtcatttaccattggtgggtcagaaaccg 25417191  T
Q  471 atgcgaaag 479  Q
     ||||||||    
T  25417190 gtgcgaaag 25417182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 437
Target Start/End: Original strand, 28857128 - 28857194
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccgg 437  Q
    |||| |||||||||||||||||||||||||| |||| |||||| |||||| || |||||| ||||||    
T  28857128 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccgg 28857194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 14588724 - 14588651
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||  |||| |||| ||| ||||||||||| |||||| || |||||| |||||||||||||    
T  14588724 aatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtc 14588651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 23247458 - 23247385
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||||||| |||||||| ||||| |||| ||||||| || |||||  |||| ||||||||    
T  23247458 aatatcgggttcgattcccaggaggaacaacgcttgatcagtatgcatgcctctacgcacgagccagattagtc 23247385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 23383657 - 23383730
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||||||||||||||||| |||| |||||| || ||| || |||||| ||| |||||||||    
T  23383657 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtc 23383730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 369 - 481
Target Start/End: Original strand, 21375350 - 21375461
Alignment:
Q  369 gaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaac 468  Q
    |||||||||||||||| |||||  |||||||||  |||||||||| ||||||||| |||||| || ||||||||||  | |||   | ||| ||||||||    
T  21375350 gaaatatcgggttcgactccca-agggaacaacatttgaccagtgcgcatgcttctacgcatgagtcggattagtcgtccatctttgatggatcggaaac 21375448  T
Q  469 caatgcgaaagcc 481  Q
    || ||||||||||    
T  21375449 cagtgcgaaagcc 21375461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 444
Target Start/End: Original strand, 30995128 - 30995194
Alignment:
Q  378 ggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||||||||| |||| |||| | |||||| || |||||  |||||||||||||    
T  30995128 ggttcgattcccagggggaacaacacttggccagggcgcatgcctctacgcacgagccggattagtc 30995194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 40117415 - 40117485
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    |||||||  ||||||| |||||||||||||| |||| |||||| |||||| || |||||| ||||||||||    
T  40117415 aatatcgaattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggatta 40117485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 420
Target Start/End: Original strand, 1899001 - 1899050
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgc 420  Q
    |||| |||||||||||||||||||||||||| |||| |||||| ||||||    
T  1899001 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgc 1899050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 5732027 - 5731954
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||||||| |||||||| |||| |||||| |||||| || ||| || |||| ||||||||    
T  5732027 aataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgtatgagccagattagtc 5731954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 7866581 - 7866654
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||| ||| |||||||| |||| ||||||||||||| || |||||  | |||||||||||    
T  7866581 aataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtc 7866654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 41800977 - 41801050
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||| || |||||||||| |||||||| || |||||  || |||||  |||||||||||||    
T  41800977 aatatcgggttcgattctcaaggggaacaacgcttgaccaatgcgcatgtctctacgcacgagccggattagtc 41801050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 444
Target Start/End: Original strand, 12081914 - 12081981
Alignment:
Q  377 gggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||| ||||||||||||| |||| |||||| |||||| || |||||  ||||| |||||||    
T  12081914 gggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtc 12081981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 14152050 - 14152120
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    |||| |||||||||||| ||  ||||||||| |||| |||||||||||||||| |  ||| ||||||||||    
T  14152050 aataccgggttcgattctcatagggaacaacgcttggccagtgtgcatgcttctatccatgagccggatta 14152120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 441
Target Start/End: Complemental strand, 20682724 - 20682654
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    ||||| ||||| |||| |||||||||||||| |||| |||||| |||||| || |||||  ||||||||||    
T  20682724 aatattgggttagatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggatta 20682654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 444
Target Start/End: Complemental strand, 22655257 - 22655191
Alignment:
Q  378 ggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||| |||||   |||| |||||||||||| || ||||||||| | ||||||||    
T  22655257 ggttcgattcccaggggaaacaatgtttgatcagtgtgcatgcctctacgcataagtcagattagtc 22655191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 443
Target Start/End: Complemental strand, 35245091 - 35245041
Alignment:
Q  393 gggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagt 443  Q
    |||||||||  |||||||||||||||||||| |||||| |||| |||||||    
T  35245091 gggaacaacgtttgaccagtgtgcatgcttctacgcatgagcctgattagt 35245041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 38897825 - 38897716
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||||||||||| ||||||| |||||| |||| |||||| |||||| || |||||  ||||||||||||  || | |   ||||| ||||||||||    
T  38897825 aataccgggttcgatttccagggg-aacaacgcttggccagtgcgcatgcctctacgcacgagccggattagttgcccacctttggtggatcggaaacca 38897727  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  38897726 gtgcgaaagcc 38897716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 14974431 - 14974358
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||  | ||||||||||  ||| ||||||  ||||| || |||||| |||||||||||||    
T  14974431 aatatcgggttcgattctaaaggggaacaacatttggccagtgcacatgcctctacgcatgagccggattagtc 14974358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 406
Target Start/End: Original strand, 18045645 - 18045674
Alignment:
Q  377 gggttcgattcccagggggaacaacccttg 406  Q
    ||||||||||||||||||||||||||||||    
T  18045645 gggttcgattcccagggggaacaacccttg 18045674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 37263241 - 37263313
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||| |||||| |||||| |||| ||| || |||||| || |||||  |||||||||||||    
T  37263241 aatatcgggttcgattctcagggg-aacaacgcttggccaatgcgcatgcctctacgcacgagccggattagtc 37263313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 42291612 - 42291539
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||| ||||||||||| ||||||| |||| ||||||  ||||| || |||||  |||||||||||||    
T  42291612 aataccgggtttgattcccagggtgaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtc 42291539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 441
Target Start/End: Complemental strand, 11845910 - 11845838
Alignment:
Q  369 gaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    |||||||||||||||||| | ||||||||||||  ||| |||||| |||||| || ||| || ||||| ||||    
T  11845910 gaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatgagccgaatta 11845838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 443
Target Start/End: Original strand, 38369700 - 38369771
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagt 443  Q
    ||||||||||||||||| || |||||||||| |||| |||||| |||||| || |||||  || |||||||||    
T  38369700 aatatcgggttcgattctca-ggggaacaacacttggccagtgcgcatgcctctacgcacgagtcggattagt 38369771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 39099868 - 39099788
Alignment:
Q  389 cagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacc 469  Q
    ||||||||||||| |||| ||||||  ||||| || |||||| ||||||||||||| || | |   |||||||||||||||    
T  39099868 cagggggaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaacc 39099788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 9147304 - 9147377
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||||||||||||| || |||||||||||  ||||| || ||||||||||||||||||||    
T  9147304 aatatcgggttcgattcccagggggaacgacacttgaccagtgcacatgcctctacgcataagccggattagtc 9147377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 6606204 - 6606094
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||||||||| ||||||||||||| |||| ||||||| ||||| || |||||| |||||||||||||  | | ||  |||||||||||||||     
T  6606204 aataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccg 6606105  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  6606104 gtgcgaaagcc 6606094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 8612081 - 8611971
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||||||||||||| ||| |||||||| ||||||||||||||||||||| |||||| | ||||||||||| || | |   |||||||| ||||||     
T  8612081 aataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccg 8611982  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  8611981 gtgcgaaagcc 8611971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 8932664 - 8932774
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    ||||||||||||||||||||||||||||||| |||| | |||| |||||| || |||||| |||||||||| ||||| | |   | |||||||||||||     
T  8932664 aatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccg 8932763  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  8932764 gtgcgaaagcc 8932774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 8944130 - 8944240
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    ||||||||||||||||||||||||||||||| |||| | |||| |||||| || |||||| |||||||||| ||||| | |   | |||||||||||||     
T  8944130 aatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatgagccggattaatcacccacctttgatgggtcggaaaccg 8944229  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  8944230 gtgcgaaagcc 8944240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 14107465 - 14107355
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||||||||||||||||| |||||||| |||||||||||  ||||| || |||||| ||||||||||||| || || |   ||||||||||||||     
T  14107465 aataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctctacgcatgagccggattagtcgcccattattagtgggtcggaaaccg 14107366  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  14107365 gtgcgaaagcc 14107355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 371 - 480
Target Start/End: Complemental strand, 5253330 - 5253221
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||||||||||||||||||||||| |||| |||||| |||||| || |||||| |||||||||| || || | |   |||||||||||||||     
T  5253330 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccg 5253231  T
Q  471 atgcgaaagc 480  Q
     |||||||||    
T  5253230 gtgcgaaagc 5253221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 371 - 443
Target Start/End: Complemental strand, 24671973 - 24671901
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagt 443  Q
    |||| ||||||| |||||||| ||||||||| |||||||||||||||||| || ||||| |||||||||||||    
T  24671973 aataccgggttctattcccagagggaacaacacttgaccagtgtgcatgcctctacgcacaagccggattagt 24671901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 9179848 - 9179770
Alignment:
Q  366 caggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||| |||||||||||||||||||||||||| |||||||||| ||||| | || |||||| ||| |||||||||    
T  9179848 cagggaataccgggttcgattcccagggggaacaacacttgaccagtatgcatacctctacgcatgagctggattagtc 9179770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 21898651 - 21898724
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||||||| |||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  21898651 aataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 21898724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 19089508 - 19089611
Alignment:
Q  378 ggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcgaa 477  Q
    |||| ||||||||||||||||||| |||| |||||| |||||| || |||||  |||||||||||||  ||| |   |||||||||||||||  ||||||    
T  19089508 ggtttgattcccagggggaacaacacttggccagtgagcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcgaa 19089607  T
Q  478 agcc 481  Q
    ||||    
T  19089608 agcc 19089611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 13036111 - 13036038
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||  ||||||||||||| |||| |||||| |||||| || |||||| |||| ||||||||    
T  13036111 aatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattagtc 13036038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 376 - 481
Target Start/End: Complemental strand, 29444867 - 29444762
Alignment:
Q  376 cgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcg 475  Q
    ||||||||||| | |||||||||||| |||| |||||| |||||| || |||||| ||||||||||||   | |||   |||||||||||||| | ||||    
T  29444867 cgggttcgatttctagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaactagtgcg 29444768  T
Q  476 aaagcc 481  Q
    ||||||    
T  29444767 aaagcc 29444762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 12635824 - 12635927
Alignment:
Q  378 ggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcgaa 477  Q
    |||| |||||||||||| |||||| |||| | |||| |||||| || ||||| |||||||||||||| || |  |  |||||||||||||||  ||||||    
T  12635824 ggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagccggattagtcgcccactattggtgggtcggaaaccggtgcgaa 12635923  T
Q  478 agcc 481  Q
    ||||    
T  12635924 agcc 12635927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 444
Target Start/End: Original strand, 8938721 - 8938787
Alignment:
Q  378 ggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||| |||||||| ||||||||||| ||| || || |||||| ||||| |||||||    
T  8938721 ggttcgattcccaggaggaacaacacttgaccagtgcgcaagcatctacgcatgagccgaattagtc 8938787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 379 - 480
Target Start/End: Original strand, 30410456 - 30410557
Alignment:
Q  379 gttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcgaaa 478  Q
    ||||||||| |||| |||||||| ||| ||||||| |||||| || |||||| ||| |||||| || |  |||   ||||||||||||||| ||||||||    
T  30410456 gttcgattctcaggaggaacaacacttaaccagtgcgcatgcctctacgcatgagctggattaatcgctcatctttggtgggtcggaaaccgatgcgaaa 30410555  T
Q  479 gc 480  Q
    ||    
T  30410556 gc 30410557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 324 - 359
Target Start/End: Original strand, 8938657 - 8938692
Alignment:
Q  324 taaccaagttgtttgggctccggtgacaaggagctc 359  Q
    ||||||||||||||||||||| ||||||||||||||    
T  8938657 taaccaagttgtttgggctccagtgacaaggagctc 8938692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 401
Target Start/End: Complemental strand, 3030725 - 3030695
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaac 401  Q
    |||||||||||||||||||||||||||||||    
T  3030725 aatatcgggttcgattcccagggggaacaac 3030695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 3588052 - 3587979
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||||| |||||||||| |||| ||||||  ||| | || |||||| | |||||||||||    
T  3588052 aataccgggttcgattcccaaggggaacaacgcttggccagtgcacatacctctacgcatgaaccggattagtc 3587979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 442
Target Start/End: Complemental strand, 33859432 - 33859355
Alignment:
Q  365 tcaggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattag 442  Q
    |||||||||| |||||||||||   ||||||||||||  ||| |||||| |||||| || |||||| || ||||||||    
T  33859432 tcaggaaataccgggttcgatttttagggggaacaacgtttgcccagtgcgcatgcctctacgcattagtcggattag 33859355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 360
Target Start/End: Complemental strand, 3030782 - 3030746
Alignment:
Q  324 taaccaagttgtttgggctccggtgacaaggagctca 360  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  3030782 taaccaagttgtttgggctccagtggcaaggagctca 3030746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 380 - 444
Target Start/End: Original strand, 12606442 - 12606506
Alignment:
Q  380 ttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||| ||||||||||||||  ||| |||||| |||||| || |||||  |||||||||||||    
T  12606442 ttcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtc 12606506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 9e-19; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 30767355 - 30767247
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||||||| || |||||  ||||||||||||| || | |   |||||||||||||| |    
T  30767355 aatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaacta 30767256  T
Q  471 atgcgaaag 479  Q
     ||||||||    
T  30767255 gtgcgaaag 30767247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 371 - 479
Target Start/End: Original strand, 35315955 - 35316063
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||||| || |||||| ||| ||||||||| || |     |||||||||||||||     
T  35315955 aatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagctggattagtcgcccacttttggtgggtcggaaaccg 35316054  T
Q  471 atgcgaaag 479  Q
    |||||||||    
T  35316055 atgcgaaag 35316063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 7310811 - 7310701
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||||||||||||| ||||||||| |||| || |||||||||| || |||||  ||||||||||||| |  |||   |||||||||||||||     
T  7310811 aataccgggttcgattcccagtgggaacaacacttgcccggtgtgcatgcctctacgcacgagccggattagtcgctcatctttggtgggtcggaaaccg 7310712  T
Q  471 atgcgaaagcc 481  Q
    |||||||||||    
T  7310711 atgcgaaagcc 7310701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 29127918 - 29128028
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||||||||||||||| |||||| ||||||| ||||  ||||| |||||| || |||||| ||||||||||||| || | |   |||||||||||||||     
T  29127918 aatatcgggttcgatttccagggagaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccg 29128017  T
Q  471 atgcgaaagcc 481  Q
    |||||||||||    
T  29128018 atgcgaaagcc 29128028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 26207909 - 26207836
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||||| |||||||||| |||| ||||||||||||| || |||||| |||||||||||||    
T  26207909 aataccgggttcgattcccacggggaacaacgcttgtccagtgtgcatgcctctacgcatgagccggattagtc 26207836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 478
Target Start/End: Complemental strand, 51683055 - 51682955
Alignment:
Q  378 ggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcgaa 477  Q
    |||||||||||||||||||||||| ||||||||||| |||||| ||  | ||  ||||||||||||| || | ||  |||||||||||||||| ||||||    
T  51683055 ggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctccacacgagccggattagtcgcccaccaatggtgggtcggaaaccagtgcgaa 51682956  T
Q  478 a 478  Q
    |    
T  51682955 a 51682955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 29135912 - 29135985
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||| |||||||||||||||||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  29135912 aataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 29135985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 49198350 - 49198423
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||| |||||||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  49198350 aataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 49198423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 368 - 444
Target Start/End: Original strand, 7328840 - 7328915
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||| |||||||||||||||||||||||||| |||| |||||| |||||| |  |||||| |||||||||||||    
T  7328840 ggaaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggattagtc 7328915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 376 - 444
Target Start/End: Original strand, 26043816 - 26043884
Alignment:
Q  376 cgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||| ||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  26043816 cgggttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 26043884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 377 - 481
Target Start/End: Complemental strand, 28572313 - 28572209
Alignment:
Q  377 gggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcga 476  Q
    |||||||||||||||||| |||||| |||| ||||| ||||||| || |||||  ||||||||||||| || | |   |||||||||||||||  |||||    
T  28572313 gggttcgattcccaggggaaacaacgcttggccagtatgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcga 28572214  T
Q  477 aagcc 481  Q
    |||||    
T  28572213 aagcc 28572209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 365 - 444
Target Start/End: Original strand, 39849065 - 39849143
Alignment:
Q  365 tcaggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||| ||| ||||||||||||||||| || |||||| |||| ||||||||||||| || |||||| |||||||||||||    
T  39849065 tcagggaatttcgggttcgattcccagagg-aacaacgcttggccagtgtgcatgcctctacgcatgagccggattagtc 39849143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 41630678 - 41630547
Alignment:
Q  323 ataaccaagttgtttgggctccggtgacaaggagctc---------acgtatcaggaaa-tatcgggttcgattcccagggggaacaacccttgaccagt 412  Q
    |||||||||||||||||||||| ||||||||||||||         ||||| | ||||| || ||||||| ||||||| |||||||||| |||| |||||    
T  41630678 ataaccaagttgtttgggctccagtgacaaggagctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagt 41630579  T
Q  413 gtgcatgcttcaacgcataagccggattagtc 444  Q
    | |||||| || || ||| |||||||||||||    
T  41630578 gcgcatgcctctacacatgagccggattagtc 41630547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 51060389 - 51060279
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    ||||||||||||||||| ||||||||||||| ||||  ||||| |||||| || |||||| | | |||||||||  | | ||  |||||||||||||||     
T  51060389 aatatcgggttcgattctcagggggaacaacacttggtcagtgcgcatgcctctacgcatgaactggattagtcgtccaccattggtgggtcggaaaccg 51060290  T
Q  471 atgcgaaagcc 481  Q
     ||||||||||    
T  51060289 gtgcgaaagcc 51060279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 6462411 - 6462484
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||| ||||| ||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  6462411 aataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 6462484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 33251661 - 33251734
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||||| | |||||||||  ||| ||||||||||||| || |||||| |||||||||||||    
T  33251661 aataccgggttcgattcccggtgggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtc 33251734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 54261225 - 54261298
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||| ||| |||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  54261225 aataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 54261298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 469
Target Start/End: Complemental strand, 50405705 - 50405613
Alignment:
Q  377 gggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacc 469  Q
    |||||||||||| ||||| |||||| ||||||||||| |||||| || |||||  || |||||||||| || | ||  |||||||||||||||    
T  50405705 gggttcgattccgaggggaaacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtcggaaacc 50405613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 928608 - 928673
Alignment:
Q  380 ttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtca 445  Q
    |||||||| ||||||||||||| ||||||||||| ||||||  | |||||  ||||||||||||||    
T  928608 ttcgattctcagggggaacaacacttgaccagtgcgcatgccgctacgcacgagccggattagtca 928673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 379 - 444
Target Start/End: Original strand, 40944890 - 40944954
Alignment:
Q  379 gttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||||||||| ||| |||||| ||||||| || |||||| || ||||||||||    
T  40944890 gttcgattcccagggggaacaacacttaaccagtatgcatgcctctacgcatgag-cggattagtc 40944954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 42412882 - 42412809
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||||| ||||||||||| |||| | ||||  ||||| || |||||| |||||||||||||    
T  42412882 aataccgggttcgattcccggggggaacaacgcttggcaagtgcccatgcctctacgcatgagccggattagtc 42412809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 45402459 - 45402386
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||| || ||||||||| || | || ||| |||||| || |||||| |||||||||||||    
T  45402459 aatatcgggttcgattcctagagggaacaacactcggcctgtgcgcatgcctctacgcatgagccggattagtc 45402386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 45877453 - 45877526
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||| ||||||| |||||| |||| ||||||  ||||| || |||||| |||||||||||||    
T  45877453 aataccgggttcgatttccaggggaaacaacacttggccagtgcacatgcctctacgcatgagccggattagtc 45877526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 444
Target Start/End: Original strand, 3755578 - 3755642
Alignment:
Q  380 ttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||| ||||||||  |||||||||| |||||  || |||||| |||||||||||||    
T  3755578 ttcgattcccaggaggaacaacgtttgaccagtgcgcatgtctctacgcatgagccggattagtc 3755642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 29762263 - 29762155
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||||||||| |||||| |||||| |||||| |||| |||||| |||||| || | |||| ||| |||||||||  | | ||  |||||||||||||||     
T  29762263 aatatcgggtccgattctcaggggcaacaacacttggccagtgcgcatgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccg 29762164  T
Q  471 atgcgaaag 479  Q
     ||||||||    
T  29762163 gtgcgaaag 29762155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 479
Target Start/End: Original strand, 47471831 - 47471938
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||||||||||||||| |||||||||  |||| | |||| ||||||||| |||||| ||||| |||||||  | | |   |||||||||||||||     
T  47471831 aataccgggttcgattccca-ggggaacaatgcttggctagtgcgcatgcttctacgcatgagccgaattagtcgtccacctttggtgggtcggaaaccg 47471929  T
Q  471 atgcgaaag 479  Q
    |||||||||    
T  47471930 atgcgaaag 47471938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 481
Target Start/End: Complemental strand, 47749217 - 47749103
Alignment:
Q  366 caggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcgga 465  Q
    |||| |||| ||||||||||||| ||||| |||||| |||| |||||| |||||| || |||||  ||||| ||||||| || | |   ||| |||||||    
T  47749217 cagggaataccgggttcgattcctagggg-aacaactcttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccacctttggtaggtcgga 47749119  T
Q  466 aaccaatgcgaaagcc 481  Q
    |||| |||||||||||    
T  47749118 aaccgatgcgaaagcc 47749103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 444
Target Start/End: Complemental strand, 3507646 - 3507568
Alignment:
Q  366 caggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||| |||||| |||||| || ||||||||| |||| |||||| |||||| || |||||  |||||||||||||    
T  3507646 cagggaataccgggtttgattcctagagggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtc 3507568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 23511566 - 23511636
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    ||||||||||||||||| || ||||| ||||  |||||||||| |||||| || |||||| || |||||||    
T  23511566 aatatcgggttcgattcacaaggggagcaacgtttgaccagtgcgcatgcctctacgcatgagtcggatta 23511636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 444
Target Start/End: Original strand, 47219150 - 47219216
Alignment:
Q  378 ggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||| ||| |||||| |||| | |||| |||||| || |||||| |||||||||||||    
T  47219150 ggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtc 47219216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 47303598 - 47303524
Alignment:
Q  370 aaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||| |||||||||| |||||||| ||||  |||||  ||||| || || ||| |||||||||||||    
T  47303598 aaatatcgggtttgattcccaggaggaacaacacttggtcagtgcacatgcctctacacatgagccggattagtc 47303524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 401
Target Start/End: Complemental strand, 52011076 - 52011046
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaac 401  Q
    |||||||||||||||||||||||||||||||    
T  52011076 aatatcgggttcgattcccagggggaacaac 52011046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 443
Target Start/End: Original strand, 4638160 - 4638225
Alignment:
Q  378 ggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagt 443  Q
    ||||||||||||||| | |||||| ||||||||||| |||| | || |||||  ||||||||||||    
T  4638160 ggttcgattcccaggagaaacaacgcttgaccagtgcgcatacctctacgcacgagccggattagt 4638225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 449
Target Start/End: Original strand, 13367444 - 13367501
Alignment:
Q  392 ggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcaccta 449  Q
    |||||||||| ||||  |||||||||||| |  |||||| ||||||||||||||||||    
T  13367444 ggggaacaacgcttggtcagtgtgcatgcctttacgcatgagccggattagtcaccta 13367501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 26362075 - 26362002
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||| |||| |||||||| ||||||||||  |||  |||||||||||| || |||||  |||||||||||||    
T  26362075 aatatcaggtttgattcccaaggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtc 26362002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 420
Target Start/End: Complemental strand, 26590374 - 26590325
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgc 420  Q
    ||||| ||||||||||| ||||||||||||| ||||  ||||||||||||    
T  26590374 aatattgggttcgattctcagggggaacaacgcttggtcagtgtgcatgc 26590325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 49543518 - 49543591
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||| || ||||||||||  |||  |||||||||||| || |||||  ||||| |||||||    
T  49543518 aatatcgggttcgattctcatggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccgaattagtc 49543591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 53649726 - 53649799
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||| ||||| ||||||| |||| |||||| || ||  || |||||| |||||||||||||    
T  53649726 aataccgggttcgattctcagggtgaacaacacttggccagtgcgcctgtctctacgcatgagccggattagtc 53649799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 414
Target Start/End: Original strand, 7139746 - 7139794
Alignment:
Q  366 caggaaatatcgggttcgattcccagggggaacaacccttgaccagtgt 414  Q
    |||| |||| |||||||||||||||| ||||||| | ||||||||||||    
T  7139746 cagggaataccgggttcgattcccagagggaacatcacttgaccagtgt 7139794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 371 - 419
Target Start/End: Original strand, 30045820 - 30045868
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatg 419  Q
    |||| ||||||||||||| |||||||||||| |||| |||||| |||||    
T  30045820 aataccgggttcgattcctagggggaacaacgcttggccagtgcgcatg 30045868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 34374532 - 34374452
Alignment:
Q  389 cagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacc 469  Q
    |||||| |||||| ||||  ||||| |||||| |||||||||||| |||||||||| ||  ||   |||||||||||||||    
T  34374532 caggggaaacaacacttggtcagtgcgcatgcctcaacgcataagtcggattagtcgcccttctttggtgggtcggaaacc 34374452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 324 - 356
Target Start/End: Original strand, 49198293 - 49198325
Alignment:
Q  324 taaccaagttgtttgggctccggtgacaaggag 356  Q
    ||||||||||||||||||||| |||||||||||    
T  49198293 taaccaagttgtttgggctccagtgacaaggag 49198325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 6857 - 6930
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||||||||||||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  6857 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 6930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 6e-17; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 368 - 429
Target Start/End: Original strand, 17981441 - 17981502
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgca 429  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||| || |||||    
T  17981441 ggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgcctctacgca 17981502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 444
Target Start/End: Original strand, 26570924 - 26571000
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||| ||||| |||||||||||| |||| |||||||| |||| || |||||| |||||||||||||    
T  26570924 ggaaatatcgggttcaattcctagggggaacaacgcttggccagtgtgtatgcatctacgcatgagccggattagtc 26571000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 371 - 462
Target Start/End: Original strand, 6042824 - 6042915
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtc 462  Q
    |||| ||||||||||||||| |||||||||| |||| |||||| |||||| | ||||||| ||||||||||||| || | ||| ||||||||    
T  6042824 aataccgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctaaacgcatgagccggattagtcgcccaccactggtgggtc 6042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 9860102 - 9860029
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||||||| || || ||| |||| ||||||||    
T  9860102 aataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacacatgagccagattagtc 9860029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 33401906 - 33401833
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||  ||||||||||||| |||||||||||||||||| || |||||| || ||||||||||    
T  33401906 aataccgggttcgattttcagggggaacaacacttgaccagtgtgcatgcctctacgcatgagtcggattagtc 33401833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 368 - 444
Target Start/End: Original strand, 18374010 - 18374086
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||| | |||||||||| ||||| ||||||| ||||||||||| |||||| || |||||| |||||||||||||    
T  18374010 ggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtc 18374086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 376 - 444
Target Start/End: Original strand, 29933780 - 29933848
Alignment:
Q  376 cgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||| || ||| || |||||||||||||    
T  29933780 cgggttcgattcccagggagaacaacacttgaccagtgtacatgcctctacgtatgagccggattagtc 29933848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 368 - 444
Target Start/End: Original strand, 43032901 - 43032977
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||| |||||| || || ||  |||||||||||||    
T  43032901 ggaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatgcctctacacacgagccggattagtc 43032977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 6100475 - 6100548
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||||||| |||||||| |||| |||||| ||||||  | |||||| |||||||||||||    
T  6100475 aataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgccactacgcatgagccggattagtc 6100548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 10927609 - 10927682
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||| ||| |||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  10927609 aataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 10927682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 14666178 - 14666105
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||||||||| |||||| |||| |||||| |||||| || ||||| ||||| ||||||||    
T  14666178 aataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcacaagccagattagtc 14666105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 45521172 - 45521244
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||||||||| |||||| ||||| ||||| |||||| || |||||| |||||||||||||    
T  45521172 aataccgggttcgattcccagggg-aacaacacttgatcagtgcgcatgcctctacgcatgagccggattagtc 45521244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 377 - 480
Target Start/End: Original strand, 43027314 - 43027417
Alignment:
Q  377 gggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcga 476  Q
    |||||||||||||||| ||||||||  ||| ||| || |||||| || |||||| |||||||||||||  | |||   | ||||||||||||| ||||||    
T  43027314 gggttcgattcccaggaggaacaacgattgtccaatgcgcatgcctctacgcatgagccggattagtcgtccatctttgatgggtcggaaaccgatgcga 43027413  T
Q  477 aagc 480  Q
    ||||    
T  43027414 aagc 43027417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 27975894 - 27975964
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    ||||| |||||||||||||||  |||||||| ||||| |||||||||||| || |||| | ||||||||||    
T  27975894 aatattgggttcgattcccagaaggaacaacacttgatcagtgtgcatgcctctacgcttgagccggatta 27975964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 28033163 - 28033233
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    ||||| |||||||||||||||  |||||||| ||||| |||||||||||| || |||| | ||||||||||    
T  28033163 aatattgggttcgattcccagaaggaacaacacttgatcagtgtgcatgcctctacgcttgagccggatta 28033233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 441
Target Start/End: Original strand, 34846760 - 34846886
Alignment:
Q  324 taaccaagttgtttgggctccggtgacaaggagctca---------cgtatcaggaaatatcgggttcgattcccagggggaacaacccttgaccagtgt 414  Q
    ||||||||||||||||||||| ||| |||||||||||         |||| | || |||| ||||||||||||||| || ||||||| |||| ||||| |    
T  34846760 taaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacccgggaataccgggttcgattcccatggtgaacaacgcttggccagtat 34846859  T
Q  415 gcatgcttcaacgcataagccggatta 441  Q
    |||||| || ||||| ||||| |||||    
T  34846860 gcatgcctctacgcacaagccagatta 34846886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 414
Target Start/End: Complemental strand, 44031550 - 44031504
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttgaccagtgt 414  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  44031550 ggaaatatcgggttcgatttccagggggaacaacgcttggccagtgt 44031504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 2467225 - 2467152
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||| |||||||||||||| |||| |||||| |||||  || | |||| |||||||||||||    
T  2467225 aataccgggttcgatttccagggggaacaactcttggccagtgcgcatgtctctatgcatgagccggattagtc 2467152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 444
Target Start/End: Original strand, 583815 - 583888
Alignment:
Q  369 gaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||| ||||||||||||| ||||  |||||| ||||||||||| |||||| || |||||| || ||||||||||    
T  583815 gaaataccgggttcgattcctaggg--aacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtc 583888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 478
Target Start/End: Complemental strand, 15884662 - 15884556
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||||||||||||||||||| |||||| |||| | |||| |||||| || |||||  ||||||||||||| || | |   |||||||||||||||     
T  15884662 aataccgggttcgattcccagggg-aacaacacttggcaagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccg 15884564  T
Q  471 atgcgaaa 478  Q
     |||||||    
T  15884563 gtgcgaaa 15884556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 441
Target Start/End: Complemental strand, 1013084 - 1013014
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    |||| |||||||||||||||||||||||||| |||| |||||   ||||| || |||||| ||||| ||||    
T  1013084 aataccgggttcgattcccagggggaacaacgcttggccagtacacatgcctctacgcatgagccgaatta 1013014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 4479402 - 4479330
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||| ||||||||||| |||||||||| |||| |||||| |||||| || |||||| ||| |||||||||    
T  4479402 aataccggattcgattccca-ggggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtc 4479330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 8141105 - 8141178
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||| ||||||| |||||| |||| |||||| |||||| || |||||| ||| | |||||||    
T  8141105 aataccgggttcgatttccaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagctgaattagtc 8141178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 481
Target Start/End: Original strand, 8803118 - 8803167
Alignment:
Q  432 agccggattagtcacctatcacgggtgggtcggaaaccaatgcgaaagcc 481  Q
    ||||||||||||| || ||||  ||||||||||||||| |||||||||||    
T  8803118 agccggattagtcgcccatcaatggtgggtcggaaaccgatgcgaaagcc 8803167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 420
Target Start/End: Complemental strand, 38922521 - 38922472
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgc 420  Q
    |||| |||||||||||||||| ||||||||| |||| |||||| ||||||    
T  38922521 aataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgc 38922472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 1446830 - 1446903
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||||||||||||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  1446830 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 1446903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 29895791 - 29895864
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||||||||||||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  29895791 aataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtc 29895864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 371 - 480
Target Start/End: Original strand, 47078462 - 47078571
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||||||||||||||||||||||| |||| ||||||  ||||| || |||||  ||||||||||||| |  | ||  ||||||||||||||||    
T  47078462 aataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaacca 47078561  T
Q  471 atgcgaaagc 480  Q
     |||||||||    
T  47078562 gtgcgaaagc 47078571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 481
Target Start/End: Original strand, 35359749 - 35359850
Alignment:
Q  380 ttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcgaaag 479  Q
    |||||||| |||||||||||||  |||||||||| |||||| ||||||||||||  ||||||||| || |  |  |||||||||||||||  ||||||||    
T  35359749 ttcgattctcagggggaacaacgtttgaccagtgcgcatgcctcaacgcataagttggattagtcgcccactataggtgggtcggaaaccggtgcgaaag 35359848  T
Q  480 cc 481  Q
    ||    
T  35359849 cc 35359850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 368 - 444
Target Start/End: Complemental strand, 42722687 - 42722611
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||| ||||||| ||||||||| |||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  42722687 ggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 42722611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 444
Target Start/End: Complemental strand, 8064899 - 8064832
Alignment:
Q  377 gggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||| |||||| ||| ||||||||||| |||||| || |||||| |||||||||||||    
T  8064899 gggttcgattcccaaggggaataacacttgaccagtgcgcatgcctctacgcatgagccggattagtc 8064832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 377 - 479
Target Start/End: Complemental strand, 7246747 - 7246645
Alignment:
Q  377 gggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcga 476  Q
    |||||||||||| || ||||||||| |||| |||||| |||||| || |||||| ||||||||||||| || | |   |||||||||||||||  |||||    
T  7246747 gggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcga 7246648  T
Q  477 aag 479  Q
    |||    
T  7246647 aag 7246645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 370 - 444
Target Start/End: Complemental strand, 40780969 - 40780895
Alignment:
Q  370 aaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||||||||||| || |||||||||| ||||  ||||| |||||| || |||||| |||||||||||||    
T  40780969 aaatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagtc 40780895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 6779215 - 6779288
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||||||||||||||||| | || |||||| |||||| || | |||| |||||||||||||    
T  6779215 aataccgggttcgattcccagggggaacaacacctggccagtgcgcatgcctctatgcatgagccggattagtc 6779288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 444
Target Start/End: Complemental strand, 12703644 - 12703579
Alignment:
Q  379 gttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||| |||| ||||||||| ||||||||||||| |||  || ||||||||||||||||||||    
T  12703644 gttcgatttccagtgggaacaacgcttgaccagtgtgtatgtctctacgcataagccggattagtc 12703579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 16450304 - 16450377
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||| ||||||||||||||||||||||||| |||| ||||||  ||||| || |||||| |||| ||||||||    
T  16450304 aatattgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtc 16450377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 36145322 - 36145249
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||||||||| |||||| ||||| ||||| |||||| || || ||| |||||||||||||    
T  36145322 aataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagccggattagtc 36145249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 440
Target Start/End: Complemental strand, 40272438 - 40272369
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatt 440  Q
    |||||||||||||||| ||| |||||||||| |||| |||||| |||||| || ||||||||| ||||||    
T  40272438 aatatcgggttcgatttccatggggaacaacgcttggccagtgcgcatgcctctacgcataagtcggatt 40272369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 480
Target Start/End: Original strand, 52950086 - 52950195
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||||  || || ||| | || ||||||||  | | |   |||||||||||||||     
T  52950086 aatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgactctacacatgaaccagattagtcgtccacctttggtgggtcggaaaccg 52950185  T
Q  471 atgcgaaagc 480  Q
    ||||||||||    
T  52950186 atgcgaaagc 52950195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 368 - 480
Target Start/End: Original strand, 29588737 - 29588849
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaa 467  Q
    ||||||| ||||||||||||||||||| |||||  |||| | |||| |||||| || |||||  |||||||||||| | | | ||  |||||||||||||    
T  29588737 ggaaataccgggttcgattcccaggggaaacaaagcttggctagtgcgcatgcctctacgcacgagccggattagttatccaccattggtgggtcggaaa 29588836  T
Q  468 ccaatgcgaaagc 480  Q
     | ||||||||||    
T  29588837 tcgatgcgaaagc 29588849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 479
Target Start/End: Original strand, 43468351 - 43468459
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| |||||||||||||||||||||||||| |||| ||||||  |||   || |||||| ||||||||||||| || | ||  ||||||||||| |||     
T  43468351 aataccgggttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccaccagtggtgggtcggagaccg 43468450  T
Q  471 atgcgaaag 479  Q
     ||||||||    
T  43468451 gtgcgaaag 43468459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 378 - 481
Target Start/End: Original strand, 20421784 - 20421887
Alignment:
Q  378 ggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcgaa 477  Q
    ||||||||| |||||||||||||| |||| |||||| |||||| || |||||| |||| ||||| ||  | ||||  | |||||||||||||| | ||||    
T  20421784 ggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattaatcgtccatcattgatgggtcggaaaccagttcgaa 20421883  T
Q  478 agcc 481  Q
    ||||    
T  20421884 agcc 20421887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 377 - 480
Target Start/End: Original strand, 38166037 - 38166140
Alignment:
Q  377 gggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcga 476  Q
    ||||| ||||||||||||||||||| |||| |||||| |||||  || |||||  ||||||||||||| || | |   |||||||||||||||  |||||    
T  38166037 gggttggattcccagggggaacaacgcttggccagtgcgcatggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcga 38166136  T
Q  477 aagc 480  Q
    ||||    
T  38166137 aagc 38166140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 406
Target Start/End: Complemental strand, 1940884 - 1940846
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttg 406  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  1940884 ggaaatatcgggttcgattcccagggggaacaacgcttg 1940846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 10541020 - 10541078
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgca 429  Q
    |||||||||||||||| ||||||| |||||| |||| ||||||||||||| || |||||    
T  10541020 aatatcgggttcgatttccaggggaaacaacgcttggccagtgtgcatgcctctacgca 10541078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 53599064 - 53599134
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    |||| ||||||||||||||||| ||||||||  ||| |||||| |||||| || |||||| ||||||||||    
T  53599064 aataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctctacgcatgagccggatta 53599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 55921038 - 55921108
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    |||| |||||||||||||||||||||||||| ||||  ||||| |||||| || ||| || ||||||||||    
T  55921038 aataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgtatgagccggatta 55921108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 8889026 - 8889099
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||| |||||||||||| ||||  ||||| |||||  || |||||| |||||||||||||    
T  8889026 aataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggattagtc 8889099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 443
Target Start/End: Complemental strand, 48015180 - 48015108
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagt 443  Q
    |||| |||||||||||||||| ||||||||| |||| |||||| ||| || || |||||  ||||||||||||    
T  48015180 aataccgggttcgattcccagtgggaacaacgcttggccagtgcgcaagcctctacgcacgagccggattagt 48015108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 444
Target Start/End: Original strand, 17080061 - 17080120
Alignment:
Q  385 ttcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||| |||||||||| |||| |||||| |||||| || |||||| |||||||||||||    
T  17080061 ttcccatggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtc 17080120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 481
Target Start/End: Complemental strand, 36262872 - 36262764
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||| ||||||||||||||||||  |||||| |||| ||||||  ||||| || |||||  || |||||||||| || | |   |||||||| |||||||    
T  36262872 aataccgggttcgattcccaggg--aacaacgcttggccagtgcacatgcctctacgcacgagtcggattagtcgcccacctttggtgggtcagaaacca 36262775  T
Q  471 atgcgaaagcc 481  Q
    |||||||||||    
T  36262774 atgcgaaagcc 36262764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 469
Target Start/End: Complemental strand, 3159576 - 3159478
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacc 469  Q
    |||| ||||||||| | |||||||||||||| |||| |||||| |||||| || |||||  |||| |||||||| |  | ||  |||||||||||||||    
T  3159576 aataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcaccattggtgggtcggaaacc 3159478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 378 - 444
Target Start/End: Original strand, 14124027 - 14124093
Alignment:
Q  378 ggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||||||||||  ||| |||||| |||||| || || ||  |||||||||||||    
T  14124027 ggttcgattcccagggggaacaacatttggccagtgcgcatgcctctacacacgagccggattagtc 14124093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 324 - 358
Target Start/End: Original strand, 15829646 - 15829680
Alignment:
Q  324 taaccaagttgtttgggctccggtgacaaggagct 358  Q
    ||||||||||||||||||||| |||||||||||||    
T  15829646 taaccaagttgtttgggctccagtgacaaggagct 15829680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 441
Target Start/End: Original strand, 38075437 - 38075507
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggatta 441  Q
    |||| |||||||||||| |||||| |||||| |||| |||||| |||||| || |||||| ||||| ||||    
T  38075437 aataccgggttcgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagccgaatta 38075507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 384 - 444
Target Start/End: Complemental strand, 49260759 - 49260699
Alignment:
Q  384 attcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||| |||||||||| |||| |||||| |||||| || |||||  |||||||||||||    
T  49260759 attcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtc 49260699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 325 - 469
Target Start/End: Original strand, 40990 - 41144
Alignment:
Q  325 aaccaagttgtttgggctccggtgacaaggagctc---------acgta-tcaggaaatatcgggttcgattcccagggggaacaacccttgaccagtgt 414  Q
    |||||||||||||||||||| ||| ||||||||||         ||||| ||||| ||||||||||||||||| || |||||||||| ||||  ||||||    
T  40990 aaccaagttgtttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattctcaaggggaacaacacttggtcagtgt 41089  T
Q  415 gcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacc 469  Q
    |||||| || |||||  ||||||||||||| || |||   |||| ||||||||||    
T  41090 gcatgcctctacgcacgagccggattagtcgcccatctttggtgagtcggaaacc 41144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 377 - 444
Target Start/End: Original strand, 26191 - 26258
Alignment:
Q  377 gggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||||||| |||||||||||||| |||| ||||||||||||| || |||||  |||||||||||||    
T  26191 gggttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtc 26258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 8808 - 8735
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||||||||||||||||| |||| |||||| || ||| || |||||| ||| |||||||||    
T  8808 aataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtc 8735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 572 - 645
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| |||||||||||| ||||||||||||| ||||| |||||||||||| || ||| || |||| ||||||||    
T  572 aataccgggttcgattcgcagggggaacaacacttgatcagtgtgcatgcctctacgtatgagccagattagtc 645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 406
Target Start/End: Original strand, 68516 - 68554
Alignment:
Q  368 ggaaatatcgggttcgattcccagggggaacaacccttg 406  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  68516 ggaaatatcgggttcgattcccagggggaacaacgcttg 68554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 9847 - 9920
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||| ||||||| |||||||||||||| |||| |||||| |||||| || |||||  |||||||||||||    
T  9847 aataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtc 9920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 481
Target Start/End: Complemental strand, 155809 - 155708
Alignment:
Q  380 ttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaaccaatgcgaaag 479  Q
    |||||||||||||||||||||| |||| | |||| |||||| || |||||  ||||||||||||| || | |   |||||||||||| ||  ||||||||    
T  155809 ttcgattcccagggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaagccggtgcgaaag 155710  T
Q  480 cc 481  Q
    ||    
T  155709 cc 155708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 371 - 444
Target Start/End: Complemental strand, 271181 - 271108
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    ||||||||||||||||||||||||||||||| ||||  ||||| |||||  || |||||  |||||| ||||||    
T  271181 aatatcgggttcgattcccagggggaacaacgcttggtcagtgcgcatgtctctacgcacgagccgggttagtc 271108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 444
Target Start/End: Original strand, 12575 - 12648
Alignment:
Q  369 gaaatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||||| ||||||||||||| ||||  |||||| ||||||||||| |||||| || |||||| || ||||||||||    
T  12575 gaaataccgggttcgattcctaggg--aacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtc 12648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 420
Target Start/End: Original strand, 149396 - 149436
Alignment:
Q  380 ttcgattcccagggggaacaacccttgaccagtgtgcatgc 420  Q
    |||||||| ||||||||||||| ||||||||||||||||||    
T  149396 ttcgattctcagggggaacaacgcttgaccagtgtgcatgc 149436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 479
Target Start/End: Complemental strand, 42939 - 42831
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacca 470  Q
    |||||||||||||||||| |||| ||||||  ||||  ||||| |||||| || || ||| ||||||||||||| || | |   |||||||||||||||     
T  42939 aatatcgggttcgattcctagggagaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccg 42840  T
Q  471 atgcgaaag 479  Q
     ||||||||    
T  42839 gtgcgaaag 42831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 412
Target Start/End: Original strand, 9438 - 9479
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagt 412  Q
    |||| |||||||||||||||||||||||||| |||| |||||    
T  9438 aataccgggttcgattcccagggggaacaacgcttggccagt 9479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 444
Target Start/End: Original strand, 12672 - 12745
Alignment:
Q  371 aatatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtc 444  Q
    |||| ||||||||||||  ||| |||||||| |||| ||||||||||||| || |||||  | |||||||||||    
T  12672 aataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaaccggattagtc 12745  T

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Target: scaffold0116 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 373 - 469
Target Start/End: Original strand, 17394 - 17490
Alignment:
Q  373 tatcgggttcgattcccagggggaacaacccttgaccagtgtgcatgcttcaacgcataagccggattagtcacctatcacgggtgggtcggaaacc 469  Q
    |||||| |||||||| |||||| || ||  ||||||||||| ||||||||| || ||  ||||||||||||| || | ||  | |||||||||||||    
T  17394 tatcggattcgattctcaggggaaaaaatgcttgaccagtgcgcatgcttctacacacgagccggattagtcgcccaccattgatgggtcggaaacc 17490  T

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