View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20563_low_2 (Length: 710)

Name: NF20563_low_2
Description: NF20563
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20563_low_2
NF20563_low_2
[»] chr4 (14 HSPs)
chr4 (18-702)||(6947793-6948466)
chr4 (227-567)||(11160646-11160986)
chr4 (236-350)||(11931944-11932058)
chr4 (598-702)||(6950264-6950367)
chr4 (229-414)||(11174669-11174854)
chr4 (227-294)||(11166276-11166343)
chr4 (229-293)||(11179291-11179355)
chr4 (229-275)||(11182131-11182177)
chr4 (192-293)||(11189953-11190054)
chr4 (89-154)||(11190104-11190169)
chr4 (439-531)||(11179071-11179163)
chr4 (545-576)||(6950380-6950411)
chr4 (428-490)||(52791795-52791857)
chr4 (230-288)||(52791991-52792049)
[»] chr7 (2 HSPs)
chr7 (80-595)||(661917-662414)
chr7 (238-348)||(6778514-6778624)
[»] chr8 (4 HSPs)
chr8 (236-296)||(24817214-24817274)
chr8 (105-159)||(24817071-24817125)
chr8 (230-279)||(24406504-24406553)
chr8 (230-279)||(24412655-24412704)
[»] chr5 (4 HSPs)
chr5 (236-281)||(8981943-8981988)
chr5 (230-281)||(8991442-8991493)
chr5 (236-414)||(35390404-35390589)
chr5 (105-154)||(36687067-36687116)


Alignment Details
Target: chr4 (Bit Score: 597; Significance: 0; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 597; E-Value: 0
Query Start/End: Original strand, 18 - 702
Target Start/End: Complemental strand, 6948466 - 6947793
Alignment:
Q  18 agttgcttgggcacaacattataaatagtactcacgcctattctgttcctcattcacttcactcatggcatcatcatcatcgataaagaagttcaccatg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6948466 agttgcttgggcacaacattataaatagtactcacgcctattctgttcctcattcacttcactcatggcatcatcatcatcgacaaagaagttcaccatg 6948367  T
Q  118 aagagttccgacggtgagacctttgaaatcgaagaggttgtgttccaatcaatcaagaatttgacggatgatgctgccaacgacactgaaatcctggttc 217  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6948366 aagagttccgacggtgagacatttgaaatcgaagaggttgtgttccaatcaatcaagaatttgacggatggtgctgccaacgacactgaaatcctggttc 6948267  T
Q  218 cgcacatacccggcaagttcttggctaaggttattgagtattgcaagaagcatgttgaggctgccagttccgatgaaaagctctttgatgatgaacttaa 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6948266 cgcacatacccggcaagttcttggctaaggttattgagtattgcaagaagcatgttgaggctgccagttctgatgaaaagctctttgatgatgaacttaa 6948167  T
Q  318 caaatgggacactgaattcgtaaaggttgataatgttacgatcttcaatctcatctgggctgcaagctatctgaatatcaagagtctcttggatctttca 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6948166 caaatgggacactgaattcgtaaaggttgataatgttacgatcttcaatctcatctgggctgctagctatctgaatatcaagagtctcttggatctttca 6948067  T
Q  418 atgaaagctctagcagacatgatcaaggataagaagccggaggagattagtaagattttcaacattgtgaatgcttaccgtcccgaggaagatgaggaag 517  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6948066 atgaaagctctagcagacatgatcaaggataagaagccggaggagattagtaagattttcaacattgtgaatgcttaccgtcccaaggaagatgaggaag 6947967  T
Q  518 ttcgtcgtgaaaatcaatgcacttttgaaaactgattagagtctagggtttagtctctaaaactttatatggttaagatagttaagaggccactgctttt 617  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||| |||    
T  6947966 ttcgttgtgaaaatcaatgcacttttgaaaactgattagagtctagggtttagtctctaaaactttatatggtt---------aagaggccactgc-ttt 6947877  T
Q  618 gttgattattatattttaacatgggattttttgttacacttcgttttcatcatgaaaagaactgcattgtagatttacctatgct 702  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  6947876 gttgattattatattttaacatgggatattatgttacgcttcgttttcatcatg-aaagaactgcattgtagatttacctatgct 6947793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 227 - 567
Target Start/End: Original strand, 11160646 - 11160986
Alignment:
Q  227 ccggcaagttcttggctaaggttattgagtattgcaagaagcatgttgaggctgccagttccgatgaaaagctctttgatgatgaacttaacaaatggga 326  Q
    |||||||| ||||||||| |||||||||| ||||||||||||||||||| ||| ||||||| |||||||||| || ||| |||||| |||||||||||||    
T  11160646 ccggcaagatcttggctatggttattgagcattgcaagaagcatgttgacgctaccagttctgatgaaaagccctctgaagatgaaattaacaaatggga 11160745  T
Q  327 cactgaattcgtaaaggttgataatgttacgatcttcaatctcatctgggctgcaagctatctgaatatcaagagtctcttggatctttcaatgaaag-c 425  Q
    |||||||||||| ||||||||  | | |||  ||||| ||||||||| |||||||| |||||| || ||||| |||||  |||||||| | ||| ||| |    
T  11160746 cactgaattcgtcaaggttgaccaagataccctcttcgatctcatcttggctgcaaactatctaaacatcaaaagtctgctggatcttac-atgcaagac 11160844  T
Q  426 tctagcagacatgatcaaggataagaagccggaggagattagtaagattttcaacattgtgaatgcttaccgtcccgaggaagatgaggaagttcgtcgt 525  Q
    | |||||||||||||||||| || || ||||||||||||| |||||| |||||||||| | |||| ||||  ||| |||||||| |||||||| ||| |     
T  11160845 tgtagcagacatgatcaagggtaggacgccggaggagattcgtaagactttcaacattattaatgattacactccggaggaagaggaggaagtccgtagc 11160944  T
Q  526 gaaaatcaatgcacttttgaaaactgattagagtctagggtt 567  Q
    |||| ||||||  |||||||  | ||||||||||||||||||    
T  11160945 gaaactcaatgggcttttgacgaatgattagagtctagggtt 11160986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 236 - 350
Target Start/End: Complemental strand, 11932058 - 11931944
Alignment:
Q  236 tcttggctaaggttattgagtattgcaagaagcatgttgaggctgccagttccgatgaaaagctctttgatgatgaacttaacaaatgggacactgaatt 335  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||  || |||||| | || ||||||||  |||||||    
T  11932058 tcttggcgaaggttattgagtattgcaagaagcatgttgaggctgagagttccgatggaaagccctccgaggatgaattgaagaaatgggatgctgaatt 11931959  T
Q  336 cgtaaaggttgataa 350  Q
    ||| |||||||||||    
T  11931958 cgtcaaggttgataa 11931944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 598 - 702
Target Start/End: Complemental strand, 6950367 - 6950264
Alignment:
Q  598 gttaagaggccactgcttttgttgattattatattttaacatgggattttttgttacacttcgttttcatcatgaaaagaactgcattg-tagatttacc 696  Q
    |||||||| |||||||||| |||| |||||||||||||||||||||| || |||||| |||||||||||||||| |||||||||||||| |||||||| |    
T  6950367 gttaagagaccactgcttt-gttgtttattatattttaacatgggatattatgttacgcttcgttttcatcatg-aaagaactgcattgttagatttatc 6950270  T
Q  697 tatgct 702  Q
    ||||||    
T  6950269 tatgct 6950264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 229 - 414
Target Start/End: Original strand, 11174669 - 11174854
Alignment:
Q  229 ggcaagttcttggctaaggttattgagtattgcaagaagcatgttgaggctgccagttccgatgaaaagctctttgatgatgaacttaacaaatgggaca 328  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||||   ||| || ||| ||||||| |     || ||||||||||| || |||||      
T  11174669 ggcaagatcttggctaaggttatcgagtattgcaagaaacatgttgaatatgcaagatccaatgaaaaaccaccggaggatgaacttaagaagtgggatg 11174768  T
Q  329 ctgaattcgtaaaggttgataatgttacgatcttcaatctcatctgggctgcaagctatctgaatatcaagagtctcttggatctt 414  Q
    ||||||||||  |||||||| | |  ||  ||||| ||||||||| |||||| | |||| |||| ||||||||||| |||||||||    
T  11174769 ctgaattcgtccaggttgatcaagaaaccctcttcgatctcatcttggctgctaactatttgaacatcaagagtcttttggatctt 11174854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 11166343 - 11166276
Alignment:
Q  227 ccggcaagttcttggctaaggttattgagtattgcaagaagcatgttgaggctgccagttccgatgaa 294  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||||| ||||| ||||| ||||||    
T  11166343 ccggcaagatcttggctatggttattgagtattgcaagaaacatgttgatgctgcaagttctgatgaa 11166276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 11179355 - 11179291
Alignment:
Q  229 ggcaagttcttggctaaggttattgagtattgcaagaagcatgttgaggctgccagttccgatga 293  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||| ||||| ||||| |||||    
T  11179355 ggcaagatcttggctatggttattgagtattgcaagaaacatgttgatgctgcaagttctgatga 11179291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 11182131 - 11182177
Alignment:
Q  229 ggcaagttcttggctaaggttattgagtattgcaagaagcatgttga 275  Q
    |||||| |||||||||||||||| |||||||||||||| ||||||||    
T  11182131 ggcaagatcttggctaaggttatcgagtattgcaagaaacatgttga 11182177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 11190054 - 11189953
Alignment:
Q  192 tgccaacgacactgaaatcctggttccgcacatacccggcaagttcttggctaaggttattgagtattgcaagaagcatgttgaggctgccagttccgat 291  Q
    |||||| |||||||||||||   || || || || | |||||| ||||||| | ||||||||||||||||||||| |||||||| ||||  ||||| |||    
T  11190054 tgccaatgacactgaaatccctatttcgaacgtaacaggcaagatcttggccatggttattgagtattgcaagaaacatgttgatgctgtaagttctgat 11189955  T
Q  292 ga 293  Q
    ||    
T  11189954 ga 11189953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 154
Target Start/End: Complemental strand, 11190169 - 11190104
Alignment:
Q  89 catcatcatcgataaagaagttcaccatgaagagttccgacggtgagacctttgaaatcgaagagg 154  Q
    |||||||||| || |||||| ||| | |||||||||| || || ||||||||||||||||||||||    
T  11190169 catcatcatcaatgaagaagatcatcctgaagagttctgaaggcgagacctttgaaatcgaagagg 11190104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 439 - 531
Target Start/End: Complemental strand, 11179163 - 11179071
Alignment:
Q  439 atcaaggataagaagccggaggagattagtaagattttcaacattgtgaatgcttaccgtcccgaggaagatgaggaagttcgtcgtgaaaat 531  Q
    |||||||| ||||  || ||||||||| | |||||||||||||||  ||||| ||||   || |||||||| |||||||||||||| ||||||    
T  11179163 atcaaggacaagacaccagaggagattcgcaagattttcaacattaagaatgattacaccccagaggaagaggaggaagttcgtcgcgaaaat 11179071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 576
Target Start/End: Complemental strand, 6950411 - 6950380
Alignment:
Q  545 aaaactgattagagtctagggtttagtctcta 576  Q
    ||||||||||||||||||||||||||||||||    
T  6950411 aaaactgattagagtctagggtttagtctcta 6950380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 428 - 490
Target Start/End: Complemental strand, 52791857 - 52791795
Alignment:
Q  428 tagcagacatgatcaaggataagaagccggaggagattagtaagattttcaacattgtgaatg 490  Q
    ||||| |||||||||||| ||||| ||||||||||||| | |||  ||||||||||| |||||    
T  52791857 tagcaaacatgatcaagggtaagacgccggaggagatttgcaaggctttcaacattgagaatg 52791795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 52792049 - 52791991
Alignment:
Q  230 gcaagttcttggctaaggttattgagtattgcaagaagcatgttgaggctgccagttcc 288  Q
    ||||| ||||| | ||||||||||||||||| |||||||| ||||| ||| ||||||||    
T  52792049 gcaagatcttgacgaaggttattgagtattgtaagaagcacgttgaagctaccagttcc 52791991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 80 - 595
Target Start/End: Complemental strand, 662414 - 661917
Alignment:
Q  80 tcatggcatcatcatcatcgataaagaagttcaccatgaagagttccgacggtgagacctttgaaatcgaagaggttgtgttccaatcaatcaagaattt 179  Q
    ||||||||||||||||||| |  |||||| ||||| |||||||||||||| | | ||||||||||||||||||||| |||||||||||||||||||||||    
T  662414 tcatggcatcatcatcatccacgaagaagatcaccttgaagagttccgacagcgtgacctttgaaatcgaagaggtggtgttccaatcaatcaagaattt 662315  T
Q  180 gacggatgatgctgccaacgacactgaaatcctggttccgcacatacccggcaagttcttggctaaggttattgagtattgcaagaagcatgttgaggct 279  Q
    ||| ||||||| |||| |||||| ||||||||||||||||| |||| | |||||| | ||||||||||||||||||||||||||||| ||||||||||||    
T  662314 gaccgatgatgttgccgacgacattgaaatcctggttccgcgcataacgggcaagatattggctaaggttattgagtattgcaagaaacatgttgaggct 662215  T
Q  280 gccagttccgatgaaaagctctttgatgatgaacttaacaaatgggacactgaattcgtaaaggttgataatgttacgatcttcaatctcatctgggctg 379  Q
    ||||||||  |||||||||||||||||||| |||||||||||||| |||||||||||||  ||||||||||||||||| ||||||||||||| |||||||    
T  662214 gccagttcttatgaaaagctctttgatgataaacttaacaaatggtacactgaattcgtcgaggttgataatgttacgctcttcaatctcatatgggctg 662115  T
Q  380 caagctatctgaatatcaagagtctcttggatctttcaatgaaagctctagcagacatgatcaaggataagaagccggaggagattagtaagattttcaa 479  Q
    ||                  ||| |||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  662114 ca------------------agtatcttggatctttcaatcaagactctagcagacatgatcaaggataagaagccggaggatattggtaagattttcaa 662033  T
Q  480 cattgtgaatgcttaccgtcccgaggaagatgaggaagttcgtcgtgaaaatcaatgcacttttgaaaactgattagagtctagggtttagtctctaaaa 579  Q
    |||| | |||||||||||||| ||| |||| || |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  662032 cattataaatgcttaccgtccggagtaagaggatgaagtttgtcgtgaaaatcaatgcacttttgaaaactaattagagtctagggtttagtctctaaaa 661933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 238 - 348
Target Start/End: Original strand, 6778514 - 6778624
Alignment:
Q  238 ttggctaaggttattgagtattgcaagaagcatgttgaggctgccagttccgatgaaaagctctttgatgatgaacttaacaaatgggacactgaattcg 337  Q
    ||||| ||||| ||||| || || |||||||||||||| || || |||||||||||||| |  |  || ||||| ||||| || |||||  |||||||||    
T  6778514 ttggcgaaggtgattgaatactgtaagaagcatgttgatgccgcgagttccgatgaaaaaccttcagaagatgatcttaagaattgggatgctgaattcg 6778613  T
Q  338 taaaggttgat 348  Q
    | |||||||||    
T  6778614 tgaaggttgat 6778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 236 - 296
Target Start/End: Original strand, 24817214 - 24817274
Alignment:
Q  236 tcttggctaaggttattgagtattgcaagaagcatgttgaggctgccagttccgatgaaaa 296  Q
    ||||||| || ||||||||||||||||||||||||||||||||| | |||||||| |||||    
T  24817214 tcttggcgaaagttattgagtattgcaagaagcatgttgaggctacaagttccgaagaaaa 24817274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 24817071 - 24817125
Alignment:
Q  105 gaagttcaccatgaagagttccgacggtgagacctttgaaatcgaagaggttgtg 159  Q
    |||| ||||| |||| ||||||||||| ||||||||||||||||| |||||||||    
T  24817071 gaagatcaccttgaaaagttccgacggcgagacctttgaaatcgacgaggttgtg 24817125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 279
Target Start/End: Complemental strand, 24406553 - 24406504
Alignment:
Q  230 gcaagttcttggctaaggttattgagtattgcaagaagcatgttgaggct 279  Q
    ||||| ||||||| |||||||| |||||||| ||||||||||||||||||    
T  24406553 gcaagatcttggcaaaggttatcgagtattgtaagaagcatgttgaggct 24406504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 230 - 279
Target Start/End: Original strand, 24412655 - 24412704
Alignment:
Q  230 gcaagttcttggctaaggttattgagtattgcaagaagcatgttgaggct 279  Q
    ||||| ||||| | |||||||| |||||||| ||||||||||||||||||    
T  24412655 gcaagatcttgacaaaggttatcgagtattgtaagaagcatgttgaggct 24412704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 281
Target Start/End: Original strand, 8981943 - 8981988
Alignment:
Q  236 tcttggctaaggttattgagtattgcaagaagcatgttgaggctgc 281  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  8981943 tcttggcgaaggtgattgagtattgcaagaagcatgttgaggctgc 8981988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 230 - 281
Target Start/End: Original strand, 8991442 - 8991493
Alignment:
Q  230 gcaagttcttggctaaggttattgagtattgcaagaagcatgttgaggctgc 281  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||||| |||||    
T  8991442 gcaagatcttggcgaaggtgattgagtattgcaagaagcatgttgacgctgc 8991493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 236 - 414
Target Start/End: Complemental strand, 35390589 - 35390404
Alignment:
Q  236 tcttggctaaggttattgagtattgcaagaagcatgttgaggctgccagttccgatgaaaagctctttgatgatgaacttaa-------caaatgggaca 328  Q
    ||||||| ||||||||||||||||| || |||||||||||||| |  |||||||| ||||| | |||  ||||||| |||||        |  |||||||    
T  35390589 tcttggcgaaggttattgagtattgtaaaaagcatgttgaggccgggagttccgaagaaaaacccttacatgatgatcttaaggcttgggagttgggaca 35390490  T
Q  329 ctgaattcgtaaaggttgataatgttacgatcttcaatctcatctgggctgcaagctatctgaatatcaagagtctcttggatctt 414  Q
    |||||||| | ||||||||| | | |||| || || ||||||||| | |||||| |||| |||| ||||||||  | |||||||||    
T  35390489 ctgaattcatcaaggttgatcaggctacgctcctcgatctcatcttgtctgcaaactatttgaacatcaagagcttgttggatctt 35390404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 36687116 - 36687067
Alignment:
Q  105 gaagttcaccatgaagagttccgacggtgagacctttgaaatcgaagagg 154  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||| ||||    
T  36687116 gaagatcaccctgaagagttccgacggggagacctttgaaatcgacgagg 36687067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University