View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20564_high_19 (Length: 245)
Name: NF20564_high_19
Description: NF20564
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20564_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 48651247 - 48651008
Alignment:
| Q |
1 |
ttatgggtgattgattgaagatattacagatgtatggggcatattgttgttttcttgtactgaaatgaaacaattcacagctcacgctgagaagtt-aga |
99 |
Q |
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| T |
48651247 |
ttatgggtgattgattgaagatattacagatgtatggggcatattgttgttttcttgtactgaaatgaaacaattcacagctcacgctgagaagttaaga |
48651148 |
T |
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| Q |
100 |
gagataatgaaagaaagaatctgatgaatgaaatgaaacacctaggattaaaaatacataataaagaatccgaatgcagatgcagaacagatgaaataat |
199 |
Q |
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| T |
48651147 |
gagataatgaaagaaagaatatgatgaatgaaatgaaacacctaggattaaaaata-ataataaagaatccgaatgcagatgcagaacagatgaaataat |
48651049 |
T |
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| Q |
200 |
aatgtagctgcgtgcattcacgatcacgtccctctcctttg |
240 |
Q |
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| T |
48651048 |
aatgtagctgcgtgcattcacgatcacgtccctctcctttg |
48651008 |
T |
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