View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20568_high_1 (Length: 523)

Name: NF20568_high_1
Description: NF20568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20568_high_1
NF20568_high_1
[»] chr3 (66 HSPs)
chr3 (18-494)||(24999402-24999876)
chr3 (20-478)||(29655634-29656087)
chr3 (20-478)||(29670278-29670731)
chr3 (18-453)||(16400442-16400875)
chr3 (18-280)||(17966500-17966759)
chr3 (18-280)||(17996980-17997239)
chr3 (18-223)||(48460671-48460874)
chr3 (18-223)||(48476430-48476633)
chr3 (18-278)||(18237420-18237679)
chr3 (18-278)||(18252777-18253036)
chr3 (361-484)||(10388483-10388606)
chr3 (361-484)||(10405856-10405979)
chr3 (350-456)||(6226927-6227033)
chr3 (350-456)||(22491767-22491873)
chr3 (350-495)||(26427648-26427793)
chr3 (359-456)||(5008212-5008309)
chr3 (359-456)||(5023471-5023568)
chr3 (359-478)||(28106357-28106475)
chr3 (359-478)||(28121593-28121711)
chr3 (320-449)||(11100895-11101024)
chr3 (320-449)||(11115987-11116116)
chr3 (363-452)||(4411431-4411519)
chr3 (363-452)||(4426811-4426899)
chr3 (350-449)||(5709983-5710083)
chr3 (350-449)||(5720893-5720993)
chr3 (350-449)||(5731796-5731896)
chr3 (350-449)||(5760472-5760572)
chr3 (361-474)||(26295583-26295697)
chr3 (359-449)||(26680173-26680264)
chr3 (359-495)||(48460402-48460538)
chr3 (359-495)||(48476161-48476297)
chr3 (361-474)||(50139698-50139809)
chr3 (246-357)||(29138929-29139039)
chr3 (246-357)||(29153734-29153844)
chr3 (361-449)||(5586581-5586668)
chr3 (361-449)||(5599733-5599820)
chr3 (361-449)||(5614974-5615061)
chr3 (361-449)||(5620802-5620889)
chr3 (361-449)||(31954842-31954929)
chr3 (361-449)||(31970119-31970206)
chr3 (350-450)||(32289911-32290012)
chr3 (350-450)||(32300198-32300299)
chr3 (361-449)||(37002760-37002847)
chr3 (359-449)||(4337180-4337270)
chr3 (359-449)||(4352320-4352410)
chr3 (359-449)||(28363963-28364053)
chr3 (359-449)||(51776700-51776790)
chr3 (359-449)||(51791786-51791876)
chr3 (381-478)||(15370704-15370801)
chr3 (380-453)||(19927417-19927490)
chr3 (381-485)||(16631611-16631715)
chr3 (359-449)||(28015959-28016049)
chr3 (359-449)||(28031277-28031367)
chr3 (363-409)||(24322712-24322758)
chr3 (363-409)||(24338064-24338110)
chr3 (380-478)||(15731700-15731798)
chr3 (380-478)||(15746785-15746883)
chr3 (269-330)||(30008149-30008210)
chr3 (381-456)||(18921758-18921833)
chr3 (380-450)||(4787318-4787388)
chr3 (380-449)||(18282738-18282807)
chr3 (380-449)||(18298039-18298108)
chr3 (380-449)||(18313340-18313409)
chr3 (380-449)||(32433658-32433727)
chr3 (380-449)||(32448927-32448996)
chr3 (381-456)||(36132189-36132264)
[»] scaffold1816 (1 HSPs)
scaffold1816 (18-495)||(118-593)
[»] chr8 (30 HSPs)
chr8 (18-495)||(3337579-3338054)
chr8 (18-286)||(28351999-28352263)
chr8 (18-286)||(28367184-28367448)
chr8 (20-280)||(19509167-19509423)
chr8 (350-453)||(3335049-3335152)
chr8 (85-259)||(14025923-14026094)
chr8 (359-456)||(12083038-12083135)
chr8 (359-456)||(12098282-12098379)
chr8 (85-259)||(15323667-15323839)
chr8 (85-259)||(15504036-15504208)
chr8 (85-259)||(33241526-33241699)
chr8 (85-259)||(33270870-33271043)
chr8 (360-449)||(33253279-33253369)
chr8 (360-449)||(33268482-33268572)
chr8 (359-449)||(5564500-5564591)
chr8 (361-452)||(31480150-31480240)
chr8 (361-452)||(31495296-31495386)
chr8 (359-449)||(15903163-15903253)
chr8 (380-453)||(15209446-15209519)
chr8 (157-281)||(44570971-44571094)
chr8 (363-442)||(15323485-15323564)
chr8 (363-442)||(15503854-15503933)
chr8 (363-442)||(33241344-33241423)
chr8 (363-442)||(33270688-33270767)
chr8 (363-409)||(31350537-31350583)
chr8 (363-409)||(31364337-31364383)
chr8 (381-453)||(21964728-21964800)
chr8 (380-450)||(18800252-18800322)
chr8 (381-453)||(25746115-25746187)
chr8 (379-442)||(28504675-28504738)
[»] chr4 (36 HSPs)
chr4 (18-453)||(18790600-18791034)
chr4 (18-453)||(18805227-18805662)
chr4 (19-453)||(30748317-30748746)
chr4 (19-453)||(30763622-30764051)
chr4 (18-453)||(33663778-33664209)
chr4 (18-453)||(33682590-33683021)
chr4 (308-478)||(36320588-36320758)
chr4 (308-478)||(36334797-36334967)
chr4 (350-487)||(19367761-19367897)
chr4 (308-478)||(36349887-36350057)
chr4 (359-489)||(54827979-54828109)
chr4 (359-489)||(54843206-54843336)
chr4 (359-495)||(20328774-20328910)
chr4 (359-495)||(20335796-20335932)
chr4 (359-456)||(762427-762524)
chr4 (361-489)||(14728982-14729110)
chr4 (361-495)||(4564872-4565006)
chr4 (361-495)||(48916816-48916950)
chr4 (380-484)||(9480279-9480382)
chr4 (350-450)||(24464110-24464212)
chr4 (381-456)||(15386426-15386501)
chr4 (380-453)||(9248749-9248822)
chr4 (380-453)||(18028679-18028752)
chr4 (380-453)||(19640520-19640593)
chr4 (381-478)||(20756467-20756564)
chr4 (381-478)||(20762545-20762642)
chr4 (381-456)||(1670011-1670086)
chr4 (363-409)||(5704403-5704449)
chr4 (380-453)||(34854813-34854886)
chr4 (380-456)||(26407933-26408009)
chr4 (381-456)||(17094177-17094252)
chr4 (380-449)||(14749845-14749914)
chr4 (380-449)||(14768948-14769017)
chr4 (380-449)||(43151018-43151087)
chr4 (381-453)||(18466003-18466075)
chr4 (380-484)||(22112559-22112662)
[»] chr6 (48 HSPs)
chr6 (82-495)||(16668652-16669064)
chr6 (82-495)||(16683934-16684346)
chr6 (18-278)||(29496136-29496392)
chr6 (18-278)||(29511474-29511730)
chr6 (19-278)||(29567739-29567994)
chr6 (19-278)||(29583145-29583400)
chr6 (18-281)||(27479864-27480123)
chr6 (18-281)||(27495118-27495377)
chr6 (361-484)||(26106745-26106869)
chr6 (361-484)||(26121977-26122101)
chr6 (350-483)||(4453320-4453452)
chr6 (361-483)||(28977744-28977865)
chr6 (359-453)||(27067295-27067389)
chr6 (359-453)||(27038956-27039050)
chr6 (363-452)||(30970293-30970381)
chr6 (363-452)||(16564139-16564227)
chr6 (85-281)||(32781757-32781951)
chr6 (360-449)||(16934469-16934559)
chr6 (360-449)||(16949578-16949668)
chr6 (361-487)||(33377711-33377837)
chr6 (361-452)||(13514616-13514706)
chr6 (361-452)||(13525519-13525609)
chr6 (359-450)||(28202005-28202096)
chr6 (359-450)||(28217073-28217164)
chr6 (359-449)||(24048273-24048363)
chr6 (361-424)||(33366439-33366501)
chr6 (350-450)||(27351936-27352038)
chr6 (350-450)||(27364049-27364151)
chr6 (350-450)||(27454392-27454494)
chr6 (381-456)||(26913098-26913173)
chr6 (381-456)||(26930385-26930460)
chr6 (363-409)||(4519917-4519963)
chr6 (363-409)||(4535104-4535150)
chr6 (380-456)||(16346151-16346227)
chr6 (382-453)||(12616547-12616618)
chr6 (380-453)||(26501930-26502003)
chr6 (157-278)||(26783881-26784002)
chr6 (157-278)||(26795854-26795975)
chr6 (380-453)||(34472298-34472371)
chr6 (380-452)||(18939623-18939695)
chr6 (382-453)||(18815946-18816017)
chr6 (380-450)||(27293719-27293789)
chr6 (380-449)||(20216194-20216263)
chr6 (380-449)||(22110215-22110284)
chr6 (380-449)||(29544017-29544086)
chr6 (380-449)||(29559427-29559496)
chr6 (380-449)||(31545218-31545287)
chr6 (381-453)||(923474-923546)
[»] chr5 (63 HSPs)
chr5 (82-495)||(18490650-18491062)
chr5 (82-495)||(18505965-18506377)
chr5 (18-283)||(43072980-43073243)
chr5 (18-283)||(43088267-43088530)
chr5 (18-280)||(12126916-12127175)
chr5 (18-280)||(12142169-12142428)
chr5 (18-280)||(26475154-26475413)
chr5 (18-280)||(26490202-26490461)
chr5 (18-280)||(9312214-9312473)
chr5 (18-280)||(9327473-9327732)
chr5 (19-278)||(24676160-24676415)
chr5 (19-278)||(24718687-24718942)
chr5 (19-278)||(24734147-24734402)
chr5 (19-280)||(28949549-28949808)
chr5 (19-280)||(28965773-28966032)
chr5 (350-484)||(37726559-37726692)
chr5 (350-456)||(12056107-12056213)
chr5 (85-259)||(37650232-37650405)
chr5 (359-453)||(30146576-30146670)
chr5 (359-453)||(30161787-30161881)
chr5 (350-478)||(18118912-18119039)
chr5 (350-478)||(18129292-18129419)
chr5 (359-453)||(43072809-43072903)
chr5 (359-453)||(43088096-43088190)
chr5 (359-495)||(13432861-13432997)
chr5 (359-495)||(13443755-13443891)
chr5 (360-495)||(3784070-3784205)
chr5 (360-495)||(3799425-3799560)
chr5 (359-453)||(24785719-24785814)
chr5 (85-283)||(41300785-41300981)
chr5 (350-453)||(32586533-32586637)
chr5 (350-453)||(32604962-32605066)
chr5 (361-456)||(5647499-5647594)
chr5 (359-449)||(5339849-5339940)
chr5 (359-449)||(25638547-25638638)
chr5 (361-474)||(26445107-26445218)
chr5 (363-452)||(37650040-37650129)
chr5 (361-456)||(5632625-5632720)
chr5 (246-357)||(42064750-42064860)
chr5 (361-452)||(33873919-33874009)
chr5 (361-452)||(33884822-33884912)
chr5 (359-449)||(18365889-18365979)
chr5 (359-449)||(18380928-18381018)
chr5 (359-449)||(34611090-34611180)
chr5 (359-449)||(34626207-34626297)
chr5 (359-449)||(40463991-40464081)
chr5 (359-449)||(40478882-40478972)
chr5 (157-278)||(2505785-2505906)
chr5 (157-278)||(2521105-2521226)
chr5 (207-281)||(13314841-13314914)
chr5 (207-281)||(13330168-13330241)
chr5 (207-281)||(31426165-31426238)
chr5 (207-281)||(31441503-31441576)
chr5 (359-423)||(37210970-37211033)
chr5 (380-477)||(16681688-16681785)
chr5 (381-456)||(21664084-21664159)
chr5 (380-453)||(3942956-3943029)
chr5 (380-453)||(18062561-18062634)
chr5 (363-409)||(29972586-29972632)
chr5 (363-409)||(30024011-30024057)
chr5 (363-409)||(30039275-30039321)
chr5 (381-483)||(37295624-37295726)
chr5 (381-453)||(21500405-21500477)
[»] scaffold0350 (1 HSPs)
scaffold0350 (18-456)||(12479-12913)
[»] chr2 (49 HSPs)
chr2 (18-283)||(34183127-34183391)
chr2 (18-280)||(37941772-37942032)
chr2 (18-262)||(31472365-31472605)
chr2 (19-278)||(12706478-12706733)
chr2 (19-278)||(12721878-12722133)
chr2 (359-495)||(250846-250981)
chr2 (359-495)||(266376-266511)
chr2 (350-474)||(37369672-37369796)
chr2 (350-474)||(37387506-37387630)
chr2 (361-487)||(16962520-16962645)
chr2 (363-474)||(22918506-22918617)
chr2 (363-474)||(22931616-22931727)
chr2 (359-453)||(31870824-31870918)
chr2 (359-453)||(31886017-31886111)
chr2 (381-495)||(5800223-5800336)
chr2 (359-453)||(31472704-31472798)
chr2 (359-453)||(34183468-34183562)
chr2 (359-456)||(19406835-19406932)
chr2 (359-456)||(19421835-19421932)
chr2 (350-449)||(16160377-16160477)
chr2 (350-449)||(16171278-16171378)
chr2 (359-449)||(27813491-27813582)
chr2 (320-449)||(19552222-19552351)
chr2 (361-495)||(13926947-13927081)
chr2 (361-495)||(13942143-13942277)
chr2 (359-449)||(27798402-27798493)
chr2 (359-453)||(34801326-34801421)
chr2 (107-456)||(28274713-28275060)
chr2 (85-281)||(40194717-40194911)
chr2 (359-425)||(27213995-27214060)
chr2 (361-405)||(12581430-12581474)
chr2 (361-405)||(12595422-12595466)
chr2 (359-449)||(9355591-9355681)
chr2 (381-485)||(17259327-17259431)
chr2 (380-475)||(28876671-28876766)
chr2 (380-475)||(28891881-28891976)
chr2 (380-478)||(18139807-18139905)
chr2 (380-453)||(28270422-28270495)
chr2 (363-409)||(37676224-37676270)
chr2 (363-409)||(37691488-37691534)
chr2 (363-409)||(37706753-37706799)
chr2 (380-453)||(37871314-37871387)
chr2 (380-456)||(20830597-20830673)
chr2 (381-456)||(19447093-19447168)
chr2 (381-456)||(19461903-19461978)
chr2 (380-453)||(32237489-32237562)
chr2 (380-449)||(27115357-27115426)
chr2 (380-449)||(27126322-27126391)
chr2 (381-453)||(19560606-19560678)
[»] scaffold1629 (1 HSPs)
scaffold1629 (18-331)||(26-338)
[»] chr1 (22 HSPs)
chr1 (18-453)||(47201501-47201931)
chr1 (361-484)||(14894222-14894345)
chr1 (362-456)||(41783684-41783778)
chr1 (362-456)||(41798952-41799046)
chr1 (361-495)||(13767486-13767620)
chr1 (85-259)||(21504991-21505163)
chr1 (361-424)||(30727669-30727732)
chr1 (361-456)||(36507677-36507772)
chr1 (361-456)||(48094719-48094814)
chr1 (359-449)||(16558679-16558769)
chr1 (106-280)||(28579702-28579877)
chr1 (106-280)||(28595128-28595303)
chr1 (380-453)||(18292618-18292691)
chr1 (380-453)||(21480595-21480668)
chr1 (275-330)||(46195753-46195808)
chr1 (380-453)||(18288240-18288313)
chr1 (381-453)||(15433398-15433470)
chr1 (380-453)||(21887938-21888012)
chr1 (304-357)||(10935822-10935876)
chr1 (304-357)||(10955013-10955067)
chr1 (380-456)||(16198663-16198739)
chr1 (380-456)||(16213685-16213761)
[»] chr7 (35 HSPs)
chr7 (18-280)||(26309743-26310002)
chr7 (19-278)||(26522866-26523121)
chr7 (350-484)||(11027309-11027442)
chr7 (361-474)||(26660201-26660314)
chr7 (361-474)||(26675394-26675507)
chr7 (361-474)||(26685531-26685644)
chr7 (361-474)||(26689071-26689184)
chr7 (359-495)||(4274096-4274231)
chr7 (359-456)||(32998750-32998847)
chr7 (361-489)||(26498381-26498509)
chr7 (361-489)||(26599520-26599648)
chr7 (359-489)||(2771054-2771174)
chr7 (359-489)||(2783109-2783229)
chr7 (361-456)||(21541555-21541649)
chr7 (359-489)||(26696590-26696719)
chr7 (359-449)||(26265149-26265239)
chr7 (359-449)||(26325181-26325271)
chr7 (359-449)||(31081206-31081296)
chr7 (359-449)||(31093135-31093225)
chr7 (363-452)||(36880123-36880212)
chr7 (380-478)||(16499569-16499667)
chr7 (380-478)||(16508864-16508962)
chr7 (380-478)||(16523980-16524078)
chr7 (359-449)||(24892445-24892535)
chr7 (380-456)||(10922441-10922517)
chr7 (363-409)||(1591828-1591874)
chr7 (380-453)||(18622200-18622273)
chr7 (380-453)||(15919590-15919663)
chr7 (381-456)||(10851046-10851121)
chr7 (157-280)||(31554671-31554794)
chr7 (157-280)||(31569660-31569783)
chr7 (385-455)||(13896083-13896153)
chr7 (380-449)||(21997216-21997285)
chr7 (379-442)||(34193710-34193773)
chr7 (379-442)||(34196946-34197009)
[»] scaffold1179 (1 HSPs)
scaffold1179 (359-495)||(965-1102)
[»] scaffold0027 (2 HSPs)
scaffold0027 (85-259)||(113550-113721)
scaffold0027 (363-483)||(113825-113944)
[»] scaffold0166 (1 HSPs)
scaffold0166 (359-453)||(28102-28197)
[»] scaffold0048 (2 HSPs)
scaffold0048 (18-257)||(31355-31593)
scaffold0048 (363-452)||(31161-31249)
[»] scaffold0029 (3 HSPs)
scaffold0029 (85-257)||(5546-5717)
scaffold0029 (363-452)||(5823-5911)
scaffold0029 (18-61)||(5479-5522)
[»] scaffold0038 (2 HSPs)
scaffold0038 (359-450)||(2503-2594)
scaffold0038 (359-450)||(17571-17662)
[»] scaffold0667 (1 HSPs)
scaffold0667 (359-449)||(7994-8084)
[»] scaffold0923 (1 HSPs)
scaffold0923 (363-449)||(3451-3537)
[»] scaffold0159 (1 HSPs)
scaffold0159 (363-409)||(16245-16291)
[»] scaffold0022 (1 HSPs)
scaffold0022 (381-456)||(154929-155004)
[»] scaffold0240 (1 HSPs)
scaffold0240 (380-453)||(21502-21575)
[»] scaffold0001 (1 HSPs)
scaffold0001 (380-453)||(73779-73852)
[»] scaffold0174 (1 HSPs)
scaffold0174 (381-453)||(7580-7652)
[»] scaffold0289 (1 HSPs)
scaffold0289 (380-482)||(16075-16176)
[»] scaffold0074 (1 HSPs)
scaffold0074 (381-447)||(12947-13013)
[»] scaffold0196 (1 HSPs)
scaffold0196 (380-449)||(20845-20914)
[»] scaffold0161 (1 HSPs)
scaffold0161 (380-478)||(28324-28421)


Alignment Details
Target: chr3 (Bit Score: 371; Significance: 0; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 18 - 494
Target Start/End: Original strand, 24999402 - 24999876
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    ||||||| ||||||||||| || |||||||||| |||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||    
T  24999402 acattaatatatcaaatggactctatcacatatccacaaatcaatgataaaattgaccaaaa--caatcataagaaataatccaagaaagaattaaaatg 24999499  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24999500 ccatggattaatcatacaagaattttgtcaacctcaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatgaattttctaggaa 24999599  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggccca 317  Q
    |||||||||||||||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  24999600 atttatcaagatttttgatcataacactggttcaaatagcaaagaaaaacagtgcaaatagcaagacaaaaggcagaaacacacaagaaacctaggccca 24999699  T
Q  318 aaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaat 417  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24999700 aaccaaaacccaaagccaaaacacaggaaagtacagggaccacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaat 24999799  T
Q  418 ggaccggactggaccggtccggttcgctggcttataaaacggaaggagctccggttttttccattttccactttcct 494  Q
    |||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||    
T  24999800 ggaccggattggaccggtccggttcgctggcttataaaagggaaagagctccggttttttccatttttcactttcct 24999876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 20 - 478
Target Start/End: Original strand, 29655634 - 29656087
Alignment:
Q  20 attaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatgcc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||| |||||| ||||||||||    
T  29655634 attaacatatcaaatggcctttatcacatattcacaaatcaatgatagaattgacaaaa---caatcataagaaataatccaagaaagagttaaaatgcc 29655730  T
Q  120 atggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaaat 219  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  29655731 atggattaatcatacaagaattttgccaattccaatgtgcaaaaataccataaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaaat 29655829  T
Q  220 ttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggcccaaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||| || || ||  ||||| |  | |||||  || |||||||    
T  29655830 ttatcaagatttttaatcaaaacattggttcaaatagcaaagagatagggtgcaaatagcaggaaaaaagcaagaaatgtgc-agaaaaataagcccaaa 29655928  T
Q  320 -ccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatg 418  Q
     ||||| |||||||||||||| |||| |||||||| ||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  29655929 cccaaagcccaaagccaaaacgcagggaagtacagagaccacacgattgatccaggatcctggaaccctagatcaaacggccaggaatcaaaggggaatg 29656028  T
Q  419 gaccggactggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    ||||||| |||||||||||||||| ||||| |||| || || ||||||||||||||||||    
T  29656029 gaccggattggaccggtccggttcactggc-tatataaagggaggagctccggttttttc 29656087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 20 - 478
Target Start/End: Original strand, 29670278 - 29670731
Alignment:
Q  20 attaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatgcc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||| |||||| ||||||||||    
T  29670278 attaacatatcaaatggcctttatcacatattcacaaatcaatgatagaattgacaaaa---caatcataagaaataatccaagaaagagttaaaatgcc 29670374  T
Q  120 atggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaaat 219  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  29670375 atggattaatcatacaagaattttgccaattccaatgtgcaaaaataccataaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaaat 29670473  T
Q  220 ttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggcccaaa 319  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||| || || ||  ||||| |  | |||||  || |||||||    
T  29670474 ttatcaagatttttaatcaaaacattggttcaaatagcaaagagatagggtgcaaatagcaggaaaaaagcaagaaatgtgc-agaaaaataagcccaaa 29670572  T
Q  320 -ccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatg 418  Q
     ||||| |||||||||||||| |||| |||||||| ||| |||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||    
T  29670573 cccaaagcccaaagccaaaacgcagggaagtacagagaccacacgattgatccaggatcctggaaccctagatcaaacggtcaggaatcaaaggggaatg 29670672  T
Q  419 gaccggactggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    ||||||| |||||||||||||||| ||||| |||| || || ||||||||||||||||||    
T  29670673 gaccggattggaccggtccggttcactggc-tatataaagggaggagctccggttttttc 29670731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 453
Target Start/End: Original strand, 16400442 - 16400875
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||        ||||||||||||||||||| |||| |||| |||||    
T  16400442 acattaacatgtcaaatggcatttatcacatattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattgaaatg 16400538  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||   ||| |||| ||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  16400539 ccatggattaatcatacaagaattttgccaattccagcgtgcgaaaacaccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaa 16400637  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcag--aaacgcacaagaaacctaggcc 315  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| || | || || |||  |||||   |||||| ||  | |    
T  16400638 atttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagtaaaaaaaaagacagaaaaacgtgaaagaaaactgaggc 16400737  T
Q  316 caaaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaagggga 415  Q
    ||| ||||| |||||| | | ||     | | | |||||  | ||||||||||||||||||  | |||||||||||||||||||||||||||||||||||    
T  16400738 caacccaaagcccaaaactacaaggtccggatgcacaggagccacacgattgatccaggatcataaaaccctagatcaaacggccaggaatcaaagggga 16400837  T
Q  416 atggaccggactggaccggtccggttcgctggcttata 453  Q
    |||||||||| || ||||||||||||||||||||||||    
T  16400838 atggaccggattgaaccggtccggttcgctggcttata 16400875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 17966500 - 17966759
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||       |||||||||||||||||||| |||||||||||||||    
T  17966500 acattaacatatcaaatggcctttatcacattttcacaaatcaatgatagaattgacaaaa---caatcataagaaataatccaagaaagaattaaaatg 17966596  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  17966597 ccatggattaatcatacaagaattttgccaattccagcgtgcaaaaatgccat-aaaacatcaagaaaatgtcaagaagtaagcatggattttctaggaa 17966695  T
Q  218 atttatcaagattttt-aatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||| |||||||||||||||||    
T  17966696 atttatcaagatttttaaatcaagacataggttcaaatagcaaagaaaaacagtgcaaatagca 17966759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 17996980 - 17997239
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||       |||||||||||||||||||| |||||||||||||||    
T  17996980 acattaacatatcaaatggcctttatcacattttcacaaatcaatgatagaattgacaaaa---caatcataagaaataatccaagaaagaattaaaatg 17997076  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  17997077 ccatggattaatcatacaagaattttgccaattccagcgtgcaaaaatgccat-aaaacatcaagaaaatgtcaagaagtaagcatggattttctaggaa 17997175  T
Q  218 atttatcaagattttt-aatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||| |||||||||||||||||    
T  17997176 atttatcaagatttttaaatcaagacataggttcaaatagcaaagaaaaacagtgcaaatagca 17997239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 48460874 - 48460671
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||    
T  48460874 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacaaaaaa-caatcataagaaataatccaagaaagaattaaaatg 48460776  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48460775 ccatggattaatcatacaagaattttgccaattccaatatgcaaaaataccat-aaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 48460677  T
Q  218 atttat 223  Q
    ||||||    
T  48460676 atttat 48460671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 48476633 - 48476430
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||    
T  48476633 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacaaaaaa-caatcataagaaataatccaagaaagaattaaaatg 48476535  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48476534 ccatggattaatcatacaagaattttgccaattccaatatgcaaaaataccat-aaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 48476436  T
Q  218 atttat 223  Q
    ||||||    
T  48476435 atttat 48476430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 18 - 278
Target Start/End: Complemental strand, 18237679 - 18237420
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaa---ttaaa 114  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||        ||||||||||||||||||| |||| ||   |||||    
T  18237679 acattaacatgtcaaatggcatttatcacgtattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaaaaattaaa 18237583  T
Q  115 atgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctag 214  Q
    ||||||||||||||||||||||||||||||||||| |||   |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  18237582 atgccatggattaatcatacaagaattttgccaattccagcgtgcaaaaataccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctag 18237484  T
Q  215 gaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatag 278  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  18237483 gaaatttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatag 18237420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 18 - 278
Target Start/End: Complemental strand, 18253036 - 18252777
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaa---ttaaa 114  Q
    |||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||        ||||||||||||||||||| |||| ||   |||||    
T  18253036 acattaacatgtcaaatggcatttatcacgtattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaaaaattaaa 18252940  T
Q  115 atgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctag 214  Q
    ||||||||||||||||||||||||||||||||||| |||   |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||    
T  18252939 atgccatggattaatcatacaagaattttgccaattccagcgtgcaaaaataccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctag 18252841  T
Q  215 gaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatag 278  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  18252840 gaaatttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatag 18252777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 361 - 484
Target Start/End: Complemental strand, 10388606 - 10388483
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacgga 460  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  10388606 acgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggagaatggaccggactggaccggtctggttcgctggcttataaaaagga 10388507  T
Q  461 aggagctccggttttttccatttt 484  Q
    |||||||||||||| || ||||||    
T  10388506 aggagctccggtttatttcatttt 10388483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 361 - 484
Target Start/End: Complemental strand, 10405979 - 10405856
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacgga 460  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  10405979 acgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggagaatggaccggactggaccggtctggttcgctggcttataaaaagga 10405880  T
Q  461 aggagctccggttttttccatttt 484  Q
    |||||||||||||| || ||||||    
T  10405879 aggagctccggtttatttcatttt 10405856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 350 - 456
Target Start/End: Complemental strand, 6227033 - 6226927
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 449  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6227033 acaggaaccacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggagaatggaccggactggaccggtccggttcgctggct 6226934  T
Q  450 tataaaa 456  Q
    |||||||    
T  6226933 tataaaa 6226927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 350 - 456
Target Start/End: Complemental strand, 22491873 - 22491767
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 449  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22491873 acaggaaccacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggagaatggaccggactggaccggtccggttcgctggct 22491774  T
Q  450 tataaaa 456  Q
    |||||||    
T  22491773 tataaaa 22491767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 350 - 495
Target Start/End: Complemental strand, 26427793 - 26427648
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggc 448  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||  ||||||||||||| ||| |||||    
T  26427793 acaggaaccacacgattgatccaggattctgaaaccctagatcaaacggccaagaaacaaaggagaatggaccggtcctggaccggtccgattcactggc 26427694  T
Q  449 ttataaaacggaaggagctccggttttttccattttccactttcctt 495  Q
     |||||||  |||||||| |||||||||||||||||||||| |||||    
T  26427693 -tataaaagtgaaggagcaccggttttttccattttccactctcctt 26427648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 359 - 456
Target Start/End: Complemental strand, 5008309 - 5008212
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  5008309 acacgattgatccaggattcaaaaaccctagatcaaacggccaggaatcaaaggaggatggaccggactggaccggtccggttcgctggcctataaaa 5008212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 359 - 456
Target Start/End: Complemental strand, 5023568 - 5023471
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  5023568 acacgattgatccaggattcaaaaaccctagatcaaacggccaggaatcaaaggaggatggaccggactggaccggtccggttcgctggcctataaaa 5023471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 359 - 478
Target Start/End: Original strand, 28106357 - 28106475
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacg 458  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||      
T  28106357 acacgattgatccaggattcaaaaaccctagatcaaacggccaggaatcaaaggag-atggaccggactggaccggtccggttcgctggcctataaaagt 28106455  T
Q  459 gaaggagctccggttttttc 478  Q
    | |||| | |||||||||||    
T  28106456 ggaggaacaccggttttttc 28106475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 359 - 478
Target Start/End: Original strand, 28121593 - 28121711
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacg 458  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||      
T  28121593 acacgattgatccaggattcaaaaaccctagatcaaacggccaggaatcaaaggag-atggaccggactggaccggtccggttcgctggcctataaaagt 28121691  T
Q  459 gaaggagctccggttttttc 478  Q
    | |||| | |||||||||||    
T  28121692 ggaggaacaccggttttttc 28121711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 320 - 449
Target Start/End: Original strand, 11100895 - 11101024
Alignment:
Q  320 ccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatgg 419  Q
    ||||| |||||||||||||| |||| |||||||| ||| |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| |||    
T  11100895 ccaaagcccaaagccaaaacgcagggaagtacagagaccacacgattgatccagggtcctgaaaccctagatcaaacggccaggaa-caaaggggattgg 11100993  T
Q  420 accgg-actggaccggtccggttcgctggct 449  Q
    |||||  ||||||||||||||||| ||||||    
T  11100994 accggtcctggaccggtccggttcactggct 11101024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 320 - 449
Target Start/End: Original strand, 11115987 - 11116116
Alignment:
Q  320 ccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatgg 419  Q
    ||||| |||||||||||||| |||| |||||||| ||| |||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| |||    
T  11115987 ccaaagcccaaagccaaaacgcagggaagtacagagaccacacgattgatccagggtcctgaaaccctagatcaaacggccaggaa-caaaggggattgg 11116085  T
Q  420 accgg-actggaccggtccggttcgctggct 449  Q
    |||||  ||||||||||||||||| ||||||    
T  11116086 accggtcctggaccggtccggttcactggct 11116116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 4411519 - 4411431
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttat 452  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  4411519 gattgatccagggttctgaaaccctagatcaaacggccaggaa-caaaggggaatggaccggactggaccggtccggttcactggcttat 4411431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 4426899 - 4426811
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttat 452  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  4426899 gattgatccagggttctgaaaccctagatcaaacggccaggaa-caaaggggaatggaccggactggaccggtccggttcactggcttat 4426811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 449
Target Start/End: Complemental strand, 5710083 - 5709983
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggc 448  Q
    ||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  5710083 acaggaaccacacgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggc 5709984  T
Q  449 t 449  Q
    |    
T  5709983 t 5709983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 449
Target Start/End: Complemental strand, 5720993 - 5720893
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggc 448  Q
    ||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  5720993 acaggaaccacacgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggc 5720894  T
Q  449 t 449  Q
    |    
T  5720893 t 5720893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 449
Target Start/End: Complemental strand, 5731896 - 5731796
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggc 448  Q
    ||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  5731896 acaggaaccacacgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggc 5731797  T
Q  449 t 449  Q
    |    
T  5731796 t 5731796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 449
Target Start/End: Original strand, 5760472 - 5760572
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggc 448  Q
    ||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  5760472 acaggaaccacacgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggc 5760571  T
Q  449 t 449  Q
    |    
T  5760572 t 5760572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 361 - 474
Target Start/End: Complemental strand, 26295697 - 26295583
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgct-ggcttataaaacg 458  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| || ||||||||||| |    
T  26295697 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaaagggactggaccggtcttggaccggtccggttcactgggcttataaaaag 26295599  T
Q  459 gaaggagctccggttt 474  Q
    ||||||||||||||||    
T  26295598 gaaggagctccggttt 26295583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 26680173 - 26680264
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||| ||||||    
T  26680173 acacgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctgaaccggtccggttcactggct 26680264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 359 - 495
Target Start/End: Complemental strand, 48460538 - 48460402
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaac 457  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||| ||||| |||||||     
T  48460538 acacgattgatccaggatcctggaaccctagatcaaacggccagggatcaaaggggaatggaccggttctggaccggtccggttcactggc-tataaaag 48460440  T
Q  458 ggaaggagctccggttttttccattttccactttcctt 495  Q
     ||||| |  |||||||    |||||||||||||||||    
T  48460439 tgaagggggaccggtttaaatcattttccactttcctt 48460402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 359 - 495
Target Start/End: Complemental strand, 48476297 - 48476161
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaac 457  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||| ||||| |||||||     
T  48476297 acacgattgatccaggatcctggaaccctagatcaaacggccagggatcaaaggggaatggaccggttctggaccggtccggttcactggc-tataaaag 48476199  T
Q  458 ggaaggagctccggttttttccattttccactttcctt 495  Q
     ||||| |  |||||||    |||||||||||||||||    
T  48476198 tgaagggggaccggtttaaatcattttccactttcctt 48476161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 361 - 474
Target Start/End: Original strand, 50139698 - 50139809
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaacgg 459  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||  ||||||||||||||||| ||||| ||||||| ||    
T  50139698 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggttctggaccggtccggttcactggc-tataaaaagg 50139794  T
Q  460 aaggagctccggttt 474  Q
     ||||||||||||||    
T  50139795 gaggagctccggttt 50139809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 357
Target Start/End: Original strand, 29138929 - 29139039
Alignment:
Q  246 ggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggcccaaaccaaaacccaaagccaaaacacagga 345  Q
    |||||| |||||||| |||| | ||||| ||||||||| |||  ||||||||||||||||| |||| |||||| ||||| |||||  |||||||||||||    
T  29138929 ggttcagatagcaaaaagaa-cggtgcagatagcaagaaaaggagcagaaacgcacaagaagcctaagcccaacccaaagcccaacaccaaaacacagga 29139027  T
Q  346 aagtacagggac 357  Q
    ||||||||||||    
T  29139028 aagtacagggac 29139039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 357
Target Start/End: Original strand, 29153734 - 29153844
Alignment:
Q  246 ggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggcccaaaccaaaacccaaagccaaaacacagga 345  Q
    |||||| |||||||| |||| | ||||| ||||||||| |||  ||||||||||||||||| |||| |||||| ||||| |||||  |||||||||||||    
T  29153734 ggttcagatagcaaaaagaa-cggtgcagatagcaagaaaaggagcagaaacgcacaagaagcctaagcccaacccaaagcccaacaccaaaacacagga 29153832  T
Q  346 aagtacagggac 357  Q
    ||||||||||||    
T  29153833 aagtacagggac 29153844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 449
Target Start/End: Original strand, 5586581 - 5586668
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||  ||||||||||||||||| ||||||    
T  5586581 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggttctggaccggtccggttcactggct 5586668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 449
Target Start/End: Original strand, 5599733 - 5599820
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||  ||||||||||||||||| ||||||    
T  5599733 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggttctggaccggtccggttcactggct 5599820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 449
Target Start/End: Original strand, 5614974 - 5615061
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||  ||||||||||||||||| ||||||    
T  5614974 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggttctggaccggtccggttcactggct 5615061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 449
Target Start/End: Original strand, 5620802 - 5620889
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||  ||||||||||||||||| ||||||    
T  5620802 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggttctggaccggtccggttcactggct 5620889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 449
Target Start/End: Original strand, 31954842 - 31954929
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||  ||||||||||||||||| ||||||    
T  31954842 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggttctggaccggtccggttcactggct 31954929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 449
Target Start/End: Original strand, 31970119 - 31970206
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||  ||||||||||||||||| ||||||    
T  31970119 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggttctggaccggtccggttcactggct 31970206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 450
Target Start/End: Complemental strand, 32290012 - 32289911
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggc 448  Q
    ||||| || |||||||||||||||| | |||||||||||||||||||||||||||| ||| ||||  ||||||||  ||| ||||||||||||| |||||    
T  32290012 acaggaaccacacgattgatccagggtcctgaaaccctagatcaaacggccaggaaccaaggggggttggaccggtcctgaaccggtccggttcactggc 32289913  T
Q  449 tt 450  Q
    ||    
T  32289912 tt 32289911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 350 - 450
Target Start/End: Complemental strand, 32300299 - 32300198
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggc 448  Q
    ||||| || |||||||||||||||| | |||||||||||||||||||||||||||| ||| ||||  ||||||||  ||| ||||||||||||| |||||    
T  32300299 acaggaaccacacgattgatccagggtcctgaaaccctagatcaaacggccaggaaccaaggggggttggaccggtcctgaaccggtccggttcactggc 32300200  T
Q  449 tt 450  Q
    ||    
T  32300199 tt 32300198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 361 - 449
Target Start/End: Original strand, 37002760 - 37002847
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||  ||||||||||||||||| ||||||    
T  37002760 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggttctggaccggtccggttcactggct 37002847  T

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Target: chr3; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 4337180 - 4337270
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  4337180 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 4337270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 4352320 - 4352410
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  4352320 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 4352410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 28363963 - 28364053
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  28363963 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 28364053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 51776790 - 51776700
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  51776790 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 51776700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 51791876 - 51791786
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  51791876 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 51791786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 478
Target Start/End: Complemental strand, 15370801 - 15370704
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    |||||||||||||||||||||||||| || ||| | |||||||| || ||||||||||||||| ||||| ||||||| | | ||||| |||||||||||    
T  15370801 aaaccctagatcaaacggccaggaatgaa-gggaattggaccggtcttggaccggtccggttcactggcctataaaaggaagggagcgccggttttttc 15370704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 19927490 - 19927417
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||| || ||||||||||||||| ||||||||||    
T  19927490 gaaaccctagatccaacggccaggaa-caaaggggattggaccggtcttggaccggtccggttcactggcttata 19927417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 485
Target Start/End: Original strand, 16631611 - 16631715
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaacggaaggagctccggttttttcc 479  Q
    |||||||||||||||||||||||||| || ||| | |||||||| || ||||||||||||||| ||||| ||||||| |   ||||| |||||||||| |    
T  16631611 aaaccctagatcaaacggccaggaatgaa-gggaattggaccggtcttggaccggtccggttcactggcctataaaaggaggggagcaccggtttttttc 16631709  T
Q  480 attttc 485  Q
    ||||||    
T  16631710 attttc 16631715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 28016049 - 28015959
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||  |||||||| | |  ||||||||||||| ||||||    
T  28016049 acacgattgatttaggattctgaaaccctagatcaaacggccaggaa-caaggggggctggaccggaaataaaccggtccggttcactggct 28015959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 28031367 - 28031277
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||  |||||||| | |  ||||||||||||| ||||||    
T  28031367 acacgattgatttaggattctgaaaccctagatcaaacggccaggaa-caaggggggctggaccggaaataaaccggtccggttcactggct 28031277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 24322758 - 24322712
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  24322758 gattgatccaggatcctgaaaccctagatcaaacggcctggaatcaa 24322712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 24338110 - 24338064
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  24338110 gattgatccaggatcctgaaaccctagatcaaacggcctggaatcaa 24338064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 478
Target Start/End: Original strand, 15731700 - 15731798
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    ||||||||||||| |||||||| ||| ||||||||| ||||| || | |||||||||||||||| |||||||||| ||    |||||| |||||||||||    
T  15731700 gaaaccctagatccaacggccaagaa-caaaggggattggactggtcctggaccggtccggttcactggcttatataagcataggagcaccggttttttc 15731798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 380 - 478
Target Start/End: Original strand, 15746785 - 15746883
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    ||||||||||||| |||||||| ||| ||||||||| ||||| || | |||||||||||||||| |||||||||| ||    |||||| |||||||||||    
T  15746785 gaaaccctagatccaacggccaagaa-caaaggggattggactggtcctggaccggtccggttcactggcttatataagcataggagcaccggttttttc 15746883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 269 - 330
Target Start/End: Original strand, 30008149 - 30008210
Alignment:
Q  269 gtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggcccaaaccaaaacccaa 330  Q
    ||||| ||||||||| |||  ||| ||||||||||||||||||||||||| ||||| |||||    
T  30008149 gtgcagatagcaagaaaaggagcataaacgcacaagaaacctaggcccaacccaaagcccaa 30008210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 456
Target Start/End: Complemental strand, 18921833 - 18921758
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||||||||||||| ||  ||||| |||||||||| | |||||||||| ||||| ||||| |||||||    
T  18921833 aaaccctagatcaaacggccagg-attgaagggaaatggaccggtcttggaccggtctggttcactggcctataaaa 18921758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 450
Target Start/End: Original strand, 4787318 - 4787388
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggctt 450  Q
    ||||||||||||| |||||||||||| ||||||||  |||||||| | || ||||||||||||| |||||||    
T  4787318 gaaaccctagatccaacggccaggaa-caaagggggttggaccggtcttgaaccggtccggttcactggctt 4787388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 18282738 - 18282807
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || |||||||| | |||||||||||||||| ||||||    
T  18282738 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcttggaccggtccggttcactggct 18282807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 18298039 - 18298108
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || |||||||| | |||||||||||||||| ||||||    
T  18298039 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcttggaccggtccggttcactggct 18298108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 18313340 - 18313409
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || |||||||| | |||||||||||||||| ||||||    
T  18313340 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcttggaccggtccggttcactggct 18313409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 32433727 - 32433658
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || ||||||||  ||||||||||||||||| ||||||    
T  32433727 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcctggaccggtccggttcactggct 32433658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 32448996 - 32448927
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || ||||||||  ||||||||||||||||| ||||||    
T  32448996 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcctggaccggtccggttcactggct 32448927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 456
Target Start/End: Original strand, 36132189 - 36132264
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||||||||||||||||  ||||| | |||||||| | |||||| ||||| ||| ||||| |||||||    
T  36132189 aaaccctagatcaaacggccaggaat-gaagggaattggaccggtcttggaccagtccgattcactggcctataaaa 36132264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1816 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: scaffold1816
Description:

Target: scaffold1816; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 18 - 495
Target Start/End: Original strand, 118 - 593
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |        ||||||||||||||||||| |||||||||||||||    
T  118 acattaaaatatcaaaaggcctttatcacatattcacaaatcaatgataaaattggcaaaaa---aatcataagaaataatccaagaaagaattaaaatg 214  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaata-tcaagaagtaagcatggattttctagga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  215 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaagtaccataaaaacatcaagaaaaaaatcaagaagtaagcatggattttctagga 314  T
Q  217 aatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggccc 316  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  315 aatttatcaagatttttaatcaaaacattggttcaaatagcaaagaaaaacagtgcaaatagcaagacaagaggcagaaacgcacaagagacctaggccc 414  T
Q  317 aaaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaa 416  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  415 aaaccaaagcccaaagccaaaacacaggaaagtacagggaccacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggagaa 514  T
Q  417 tggaccgg-actggaccggtccggttcgctggcttataaaacggaaggagctccggttttttccattttccactttcctt 495  Q
    ||||||||  ||||||||||||||||| ||||| |||| || || |||| ||||||||||||||||||| ||||| ||||    
T  515 tggaccggtcctggaccggtccggttcactggc-tatataaggggaggatctccggttttttccatttttcacttccctt 593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 18 - 495
Target Start/End: Original strand, 3337579 - 3338054
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||    
T  3337579 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacaaaaaa-caatcataagaaataatccaagaaagaattaaaatg 3337677  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  3337678 ccatggattaatcatacaagaattttgccaattccaatatgcaaaaataccataaaa-catcaagaaaatatcaagaagtaagcatggattttctaggaa 3337776  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggccca 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3337777 atttatcaagatttttaatcaaaacattggttcaaatagcaaagaaaaacagtgcaaatagcaagacaagaggcagaaatgcacaagaaacctaggccca 3337876  T
Q  318 aaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaat 417  Q
    ||||||| |||||| | | ||     | | | |||||  | |||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||    
T  3337877 aaccaaagcccaaaactacaaggtccggatgcacaggagccacacgattgatccaggatcctaaaaccctagatcaaacggccagggatcaaaggggaat 3337976  T
Q  418 ggaccgg-actggaccggtccggttcgctggcttataaaacggaaggagctccggttttttccattttccactttcctt 495  Q
    |||||||   |||||||||||||||| ||||| |||||||  ||||| |  |||||||    |||||||||||||||||    
T  3337977 ggaccggttttggaccggtccggttcactggc-tataaaagtgaagggggaccggtttaaatcattttccactttcctt 3338054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 18 - 286
Target Start/End: Original strand, 28351999 - 28352263
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||        ||||||||||||||||||| |||||||||||||||    
T  28351999 acattaacatgtcaaatggcgtttatcacatattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaagaattaaaatg 28352095  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||    
T  28352096 ccatggattaatcatacgagaattttgccaattccaatatgcaaaaataccataaaa-caccaagaaaatatcaagaagtgagcatggattctctaggaa 28352194  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaa 286  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  28352195 atttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagcaaaacaa 28352263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 18 - 286
Target Start/End: Original strand, 28367184 - 28367448
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||        ||||||||||||||||||| |||||||||||||||    
T  28367184 acattaacatgtcaaatggcgtttatcacatattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaagaattaaaatg 28367280  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||    
T  28367281 ccatggattaatcatacgagaattttgccaattccaatatgcaaaaataccataaaa-caccaagaaaatatcaagaagtgagcatggattctctaggaa 28367379  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaa 286  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||    
T  28367380 atttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagcaaaacaa 28367448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 20 - 280
Target Start/End: Original strand, 19509167 - 19509423
Alignment:
Q  20 attaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatgcc 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||       |||||||||||||||||||| |||| | ||||||||||    
T  19509167 attaacatatcaaatggcctttatcacatattcacaaatcaatgatagaattgacaaaa---caatcataagaaataatccaagaaaaagttaaaatgcc 19509263  T
Q  120 atggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaaat 219  Q
    | |||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  19509264 acggattaatcatacaagaattttgccaattccaatgtgcaaaaataccataaaa-catcaagaaaatgtcaagaagtaatcatggattttctaggaaat 19509362  T
Q  220 ttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  19509363 ttattaagatttttaatcaaaacattggttcaaatagcaaagagatagggtgcaaatagca 19509423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 350 - 453
Target Start/End: Original strand, 3335049 - 3335152
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 449  Q
    |||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  3335049 acagtgaccacacgattgatccaggattctgaaaccctagatcaagcggccaggaatcaaaggggaatggaccggattgaaccggtccggttcgctggct 3335148  T
Q  450 tata 453  Q
    ||||    
T  3335149 tata 3335152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 85 - 259
Target Start/End: Original strand, 14025923 - 14026094
Alignment:
Q  85 tcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaa 184  Q
    |||||||||||||||||  ||||||||||||||| ||| || |||||||||||| ||||  ||| | ||||||||||||||  |||||||||||||||||    
T  14025923 tcataagaaataatccaa-aaagaattaaaatgctatgaatcaatcatacaaga-ttttatcaacctcaatatgcaaaaatgtcataaaaacatcaagaa 14026020  T
Q  185 aatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaa 259  Q
    || ||||| ||| ||||||| ||||||||| || ||||||||||||||| ||| ||||| |||||||||||||||    
T  14026021 aacatcaaaaagcaagcatgaattttctagaaattttatcaagatttttgatc-aaacactggttcaaatagcaa 14026094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 12083038 - 12083135
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  12083038 acacgattgatccaggattcaaaaaccctagatcaaacggccaggaatcaaaggggaatggaccggattgaaccggtccggttcgctggcctataaaa 12083135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 12098282 - 12098379
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  12098282 acacgattgatccaggattcaaaaaccctagatcaaacggccaggaatcaaaggggaatggaccggattgaaccggtccggttcgctggcctataaaa 12098379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 85 - 259
Target Start/End: Complemental strand, 15323839 - 15323667
Alignment:
Q  85 tcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaa 184  Q
    |||||||||||||||||  ||||||||||||||| ||| || |||||||||||| ||||  ||| | ||||||||||||||  |||||||||||||||||    
T  15323839 tcataagaaataatccaa-aaagaattaaaatgctatgaatcaatcatacaaga-ttttatcaacctcaatatgcaaaaatgtcataaaaacatcaagaa 15323742  T
Q  185 aatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaa 259  Q
    || ||||| ||| ||||||  ||||| ||| || ||||||||||||||| |||||| || |||||||||||||||    
T  15323741 aacatcaaaaagcaagcataaattttttagaaattttatcaagatttttgatcaaagcactggttcaaatagcaa 15323667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 85 - 259
Target Start/End: Complemental strand, 15504208 - 15504036
Alignment:
Q  85 tcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaa 184  Q
    |||||||||||||||||  ||||||||||||||| ||| || |||||||||||| ||||  ||| | ||||||||||||||  |||||||||||||||||    
T  15504208 tcataagaaataatccaa-aaagaattaaaatgctatgaatcaatcatacaaga-ttttatcaacctcaatatgcaaaaatgtcataaaaacatcaagaa 15504111  T
Q  185 aatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaa 259  Q
    || ||||| ||| ||||||  ||||| ||| || ||||||||||||||| |||||| || |||||||||||||||    
T  15504110 aacatcaaaaagcaagcataaattttttagaaattttatcaagatttttgatcaaagcactggttcaaatagcaa 15504036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 85 - 259
Target Start/End: Complemental strand, 33241699 - 33241526
Alignment:
Q  85 tcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaa-catcaaga 183  Q
    |||||||||||||||||  ||||||||||||||| ||| || |||||||||||| ||||  ||| | ||||||||||||||  |||||||| ||||||||    
T  33241699 tcataagaaataatccaa-aaagaattaaaatgctatgaatcaatcatacaaga-ttttatcaacctcaatatgcaaaaatgtcataaaaaacatcaaga 33241602  T
Q  184 aaatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaa 259  Q
    ||| ||||| ||| ||||||| | ||| ||| || ||||||||||||||| |||||| || |||||||||||||||    
T  33241601 aaacatcaaaaagcaagcatgaaatttttagaaattttatcaagatttttgatcaaagcactggttcaaatagcaa 33241526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 85 - 259
Target Start/End: Complemental strand, 33271043 - 33270870
Alignment:
Q  85 tcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaa-catcaaga 183  Q
    |||||||||||||||||  ||||||||||||||| ||| || |||||||||||| ||||  ||| | ||||||||||||||  |||||||| ||||||||    
T  33271043 tcataagaaataatccaa-aaagaattaaaatgctatgaatcaatcatacaaga-ttttatcaacctcaatatgcaaaaatgtcataaaaaacatcaaga 33270946  T
Q  184 aaatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaa 259  Q
    ||| ||||| ||| ||||||| | ||| ||| || ||||||||||||||| |||||| || |||||||||||||||    
T  33270945 aaacatcaaaaagcaagcatgaaatttttagaaattttatcaagatttttgatcaaagcactggttcaaatagcaa 33270870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 360 - 449
Target Start/End: Complemental strand, 33253369 - 33253279
Alignment:
Q  360 cacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  33253369 cacgattgatccaggatcataaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggct 33253279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 360 - 449
Target Start/End: Complemental strand, 33268572 - 33268482
Alignment:
Q  360 cacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  33268572 cacgattgatccaggatcataaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggct 33268482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 5564500 - 5564591
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| | |  ||||||||||||| ||||||    
T  5564500 acacgattgatctaggattctgaaaccctagatcaaacggccaggaatcaaaggggactggaccggaaataaaccggtccggttcactggct 5564591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 452
Target Start/End: Original strand, 31480150 - 31480240
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttat 452  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| || ||||||    
T  31480150 acgattgatcgagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggtcttggaccggtccggttcactagcttat 31480240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 452
Target Start/End: Original strand, 31495296 - 31495386
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttat 452  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| || ||||||    
T  31495296 acgattgatcgagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggtcttggaccggtccggttcactagcttat 31495386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 15903163 - 15903253
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||  |||||||| | |  ||||||||||||| ||||||    
T  15903163 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caaggggggctggaccggaaataaaccggtccggttcactggct 15903253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 15209519 - 15209446
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||| ||||||||| |||||||| || ||||||||||||||| ||||||||||    
T  15209519 gaaaccctagatccaacggccaggaa-caaaggggattggaccggtcttggaccggtccggttcactggcttata 15209446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 157 - 281
Target Start/End: Complemental strand, 44571094 - 44570971
Alignment:
Q  157 tgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggatttt-ctaggaaatttatcaagatttttaatcaaaacattggttcaaata 255  Q
    |||||||||  ||||||||||  |||||||| |||||||  | | ||| ||||| ||||||| |||||||  ||||  |||||| |||||||||||||||    
T  44571094 tgcaaaaatgtcataaaaacactaagaaaatgtcaagaaacatgtatgaatttttctaggaactttatcacaattt--aatcaagacattggttcaaata 44570997  T
Q  256 gcaaagagaaacagtgcaaatagcaa 281  Q
    ||||||| ||||||||| ||||||||    
T  44570996 gcaaagaaaaacagtgcgaatagcaa 44570971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 15323564 - 15323485
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttc 442  Q
    |||||||||||  | |||||||||||||||||||||||||||||| || |||||||||||||  | |||||||||||||||    
T  15323564 gattgatccagagtcctgaaaccctagatcaaacggccaggaatc-aacgggaatggaccggtttcggaccggtccggttc 15323485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 15503933 - 15503854
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttc 442  Q
    |||||||||||  | |||||||||||||||||||||||||||||| || |||||||||||||  | |||||||||||||||    
T  15503933 gattgatccagagtcctgaaaccctagatcaaacggccaggaatc-aacgggaatggaccggtttcggaccggtccggttc 15503854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 33241423 - 33241344
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttc 442  Q
    |||||||||||  | |||||||||||||||||||||||||||||| || |||||||||||||  | |||||||||||||||    
T  33241423 gattgatccagagtcctgaaaccctagatcaaacggccaggaatc-aacgggaatggaccggtttcggaccggtccggttc 33241344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 363 - 442
Target Start/End: Complemental strand, 33270767 - 33270688
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttc 442  Q
    |||||||||||  | |||||||||||||||||||||||||||||| || |||||||||||||  | |||||||||||||||    
T  33270767 gattgatccagagtcctgaaaccctagatcaaacggccaggaatc-aacgggaatggaccggtttcggaccggtccggttc 33270688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 31350583 - 31350537
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  31350583 gattgatccaggatcctgaaaccctagatcaaacggcctggaatcaa 31350537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 31364383 - 31364337
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  31364383 gattgatccaggatcctgaaaccctagatcaaacggcctggaatcaa 31364337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 381 - 453
Target Start/End: Complemental strand, 21964800 - 21964728
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||||||||||||| ||  ||||| |||||||||| | |||||||||||||||| ||||| ||||    
T  21964800 aaaccctagatcaaacggccagg-attgaagggaaatggaccggtcttggaccggtccggttcactggcctata 21964728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 450
Target Start/End: Complemental strand, 18800322 - 18800252
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggctt 450  Q
    ||||||||||||| |||||||||||| ||||||||  |||||||| | || ||||||||||||| |||||||    
T  18800322 gaaaccctagatccaacggccaggaa-caaagggggttggaccggtcttgaaccggtccggttcactggctt 18800252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 453
Target Start/End: Complemental strand, 25746187 - 25746115
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    |||||||||||| |||||||||||||  |||||||  ||||||| | |||||||||||||||| ||||| ||||    
T  25746187 aaaccctagatccaacggccaggaat-gaaggggacgggaccggtcttggaccggtccggttcactggcctata 25746115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 442
Target Start/End: Original strand, 28504675 - 28504738
Alignment:
Q  379 tgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttc 442  Q
    |||||||||||||| |||||||| | ||||| ||  |||||||||||| ||||||||||||||||    
T  28504675 tgaaaccctagatctaacggccaag-atcaagggaaaatggaccggacttggaccggtccggttc 28504738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 252; Significance: 1e-140; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 18 - 453
Target Start/End: Original strand, 18790600 - 18791034
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||    
T  18790600 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacaaaaaaacaatcataagaaataatccaagaaagaattaaaatg 18790699  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
     ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  18790700 tcatggattaatcatacaagaattttgccaattccaatatgcaaaaataccataaaa-catcaagaaagtatcaagaagtaagcatggattttctaggaa 18790798  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacg-cacaagaaacctaggccc 316  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| || |  || |||||  | |||||||||| ||||    
T  18790799 attcatcaaaatttttaatcaaaacattggttcaaatagcaaagaaaaacagtgcaaatagc-agaaaataaacaaaaacgtgaaaagaaacctaagccc 18790897  T
Q  317 aaaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaa 416  Q
    || ||||| |||||| | | ||     | | | |||||  | |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  18790898 aacccaaagcccaaaactacaaggtctggatgcacaggagccacacgattgatccaggatcctaaaaccctagatcaaacggccaggaatcaaaggggaa 18790997  T
Q  417 tggaccggactggaccggtccggttcgctggcttata 453  Q
    ||||||||| || ||||||||||||||||||||||||    
T  18790998 tggaccggattgaaccggtccggttcgctggcttata 18791034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 18 - 453
Target Start/End: Original strand, 18805227 - 18805662
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||    
T  18805227 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacaaaaaaacaatcataagaaataatccaagaaagaattaaaatg 18805326  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaa-tatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctagga 216  Q
     ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  18805327 tcatggattaatcatacaagaattttgccaattccaaatatgcaaaaataccataaaa-catcaagaaagtatcaagaagtaagcatggattttctagga 18805425  T
Q  217 aatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacg-cacaagaaacctaggcc 315  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| || |  || |||||  | |||||||||| |||    
T  18805426 aattcatcaaaatttttaatcaaaacattggttcaaatagcaaagaaaaacagtgcaaatagc-agaaaataaacaaaaacgtgaaaagaaacctaagcc 18805524  T
Q  316 caaaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaagggga 415  Q
    ||| ||||| |||||| | | ||     | | | |||||  | |||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  18805525 caacccaaagcccaaaactacaaggtctggatgcacaggagccacacgattgatccaggatcctaaaaccctagatcaaacggccaggaatcaaagggga 18805624  T
Q  416 atggaccggactggaccggtccggttcgctggcttata 453  Q
    |||||||||| || ||||||||||||||||||||||||    
T  18805625 atggaccggattgaaccggtccggttcgctggcttata 18805662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 19 - 453
Target Start/End: Complemental strand, 30748746 - 30748317
Alignment:
Q  19 cattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatgc 118  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||        ||||||||||||||||||| |||| |||||||||||    
T  30748746 cattaacatgtcaaatggcatttatcacgtattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatgc 30748650  T
Q  119 catggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaaa 218  Q
    ||||||||||||||||||||||||||||||| |||   |||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  30748649 catggattaatcatacaagaattttgccaattccagcgtgcaaaaacaccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaaa 30748551  T
Q  219 tttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggcccaa 318  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| | |||    | |||||   |||||| ||  ||||||    
T  30748550 tttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagcaaaaaaag-caaaaaaacgtgaaagaaaactgagcccaa 30748452  T
Q  319 accaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatg 418  Q
     ||||| |||||| | | ||     | | | |||||  | ||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  30748451 cccaaagcccaaaactacaaggtccggatgcacaggagccacacgattgatccaggatcataaaaccctagatcaaacggccaggaatcaaaggggaatg 30748352  T
Q  419 gaccggactggaccggtccggttcgctggcttata 453  Q
    ||||||| || ||||||||||||||||||||||||    
T  30748351 gaccggattgaaccggtccggttcgctggcttata 30748317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 19 - 453
Target Start/End: Complemental strand, 30764051 - 30763622
Alignment:
Q  19 cattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatgc 118  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||        ||||||||||||||||||| |||| |||||||||||    
T  30764051 cattaacatgtcaaatggcatttatcacgtattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatgc 30763955  T
Q  119 catggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaaa 218  Q
    ||||||||||||||||||||||||||||||| |||   |||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  30763954 catggattaatcatacaagaattttgccaattccagcgtgcaaaaacaccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaaa 30763856  T
Q  219 tttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggcccaa 318  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| | |||    | |||||   |||||| ||  ||||||    
T  30763855 tttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagcaaaaaaag-caaaaaaacgtgaaagaaaactgagcccaa 30763757  T
Q  319 accaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatg 418  Q
     ||||| |||||| | | ||     | | | |||||  | ||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||    
T  30763756 cccaaagcccaaaactacaaggtccggatgcacaggagccacacgattgatccaggatcataaaaccctagatcaaacggccaggaatcaaaggggaatg 30763657  T
Q  419 gaccggactggaccggtccggttcgctggcttata 453  Q
    ||||||| || ||||||||||||||||||||||||    
T  30763656 gaccggattgaaccggtccggttcgctggcttata 30763622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 453
Target Start/End: Original strand, 33663778 - 33664209
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||        ||||||||||||||||||| |||| |||| |||||    
T  33663778 acattaacatgtcaaatggcatttatcacatattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattgaaatg 33663874  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||   ||| |||| ||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  33663875 ccatggattaatcatacaagaattttgccaattccagcgtgcgaaaacaccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaa 33663973  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggccca 317  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| || | ||     | |||||   |||||| ||  | |||    
T  33663974 atttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagtaaaaaaaagcagaaaaacgtgaaagaaaactgaggcca 33664073  T
Q  318 aaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaat 417  Q
    | ||||| |||||| | | ||     | | | |||||  | ||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  33664074 acccaaagcccaaaactacaaggtccggatgcacaggagccacacgattgatccaggatcataaaaccctagatcaaacggccaggaatcaaaggggaat 33664173  T
Q  418 ggaccggactggaccggtccggttcgctggcttata 453  Q
    |||||||| || ||||||||||||||||||||||||    
T  33664174 ggaccggattgaaccggtccggttcgctggcttata 33664209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 453
Target Start/End: Original strand, 33682590 - 33683021
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||        ||||||||||||||||||| |||| |||| |||||    
T  33682590 acattaacatgtcaaatggcatttatcacatattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattgaaatg 33682686  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||   ||| |||| ||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  33682687 ccatggattaatcatacaagaattttgccaattccagcgtgcgaaaacaccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaa 33682785  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggccca 317  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| || | ||     | |||||   |||||| ||  | |||    
T  33682786 atttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagtaaaaaaaagcagaaaaacgtgaaagaaaactgaggcca 33682885  T
Q  318 aaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaat 417  Q
    | ||||| |||||| | | ||     | | | |||||  | ||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  33682886 acccaaagcccaaaactacaaggtccggatgcacaggagccacacgattgatccaggatcataaaaccctagatcaaacggccaggaatcaaaggggaat 33682985  T
Q  418 ggaccggactggaccggtccggttcgctggcttata 453  Q
    |||||||| || ||||||||||||||||||||||||    
T  33682986 ggaccggattgaaccggtccggttcgctggcttata 33683021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 308 - 478
Target Start/End: Original strand, 36320588 - 36320758
Alignment:
Q  308 cctaggcccaaaccaaaa-cccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaat 406  Q
    |||||||||||||| ||| |||| |  ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  36320588 cctaggcccaaacctaaagcccatactcaaaacacaggaaagcacagggaccacacgattgatccaggattctgaaaccctagatcaaacggccaggaa- 36320686  T
Q  407 caaaggggaatggaccggactggaccggtccggttcgctggcttata-aaacggaaggagctccggttttttc 478  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||| |||||||||||    
T  36320687 caaaggggaatggaccggactggaccggtccggttcactggcttatataaacgg-aggagcaccggttttttc 36320758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 308 - 478
Target Start/End: Original strand, 36334797 - 36334967
Alignment:
Q  308 cctaggcccaaaccaaaa-cccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaat 406  Q
    |||||||||||||| ||| |||| |  ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||     
T  36334797 cctaggcccaaacctaaagcccatactcaaaacacaggaaagcacagggaccacacgattgatccaggattctgaaaccctagatcaaacggccaggaa- 36334895  T
Q  407 caaaggggaatggaccggactggaccggtccggttcgctggcttata-aaacggaaggagctccggttttttc 478  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||| |||||||||||    
T  36334896 caaaggggaatggaccggactggaccggtccggttcactggcttatataaacgg-aggagcaccggttttttc 36334967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 350 - 487
Target Start/End: Complemental strand, 19367897 - 19367761
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 449  Q
    ||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  19367897 acaggaaccacacgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggaggatggaccggactggaccggtccggttcgctggct 19367798  T
Q  450 tataaaacggaaggagctccggttttttccattttcca 487  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  19367797 tataaaagggaaggagctccggtttttt-cattttcca 19367761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 308 - 478
Target Start/End: Original strand, 36349887 - 36350057
Alignment:
Q  308 cctaggcccaaaccaaaa-cccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaat 406  Q
    |||||||||||||| ||| |||| |  ||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||     
T  36349887 cctaggcccaaacctaaagcccatactcaaaacacaggaaagcacagggaccacacgattgatccaggattctgaaatcctagatcaaacggccaggaa- 36349985  T
Q  407 caaaggggaatggaccggactggaccggtccggttcgctggcttata-aaacggaaggagctccggttttttc 478  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||| |||||||||||    
T  36349986 caaaggggaatggaccggactggaccggtctggttcactggcttatataaacgg-aggagcaccggttttttc 36350057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 359 - 489
Target Start/End: Complemental strand, 54828109 - 54827979
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacg 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||      
T  54828109 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaagaaggatggaccggactggaccggtccggttcgctggcttataaaagt 54828010  T
Q  459 gaaggagctccggttttttccattttccact 489  Q
    |||||||| ||||||| || |||||||||||    
T  54828009 gaaggagcaccggtttatttcattttccact 54827979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 359 - 489
Target Start/End: Complemental strand, 54843336 - 54843206
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacg 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||||      
T  54843336 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaagaaggatggaccggactggaccggtccggttcgctggcttataaaagt 54843237  T
Q  459 gaaggagctccggttttttccattttccact 489  Q
    |||||||| ||||||| || |||||||||||    
T  54843236 gaaggagcaccggtttatttcattttccact 54843206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 359 - 495
Target Start/End: Original strand, 20328774 - 20328910
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaac 457  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||| ||     
T  20328774 acacgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggtcctggaccggtccggttcactggc-tatataag 20328872  T
Q  458 ggaaggagctccggttttttccattttccactttcctt 495  Q
    || |||||||||||||||||||||||||||||| ||||    
T  20328873 gggaggagctccggttttttccattttccacttccctt 20328910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 359 - 495
Target Start/End: Original strand, 20335796 - 20335932
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaac 457  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||| ||     
T  20335796 acacgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggtcctggaccggtccggttcactggc-tatataag 20335894  T
Q  458 ggaaggagctccggttttttccattttccactttcctt 495  Q
    || |||||||||||||||||||||||||||||| ||||    
T  20335895 gggaggagctccggttttttccattttccacttccctt 20335932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 762427 - 762524
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | |||||||||||||||| |||||||||||||    
T  762427 acacgattgatccaggattctgaaaccctagatcaaacggccaggaa-caaaggggactggaccggtcttggaccggtccggttcactggcttataaaa 762524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 361 - 489
Target Start/End: Complemental strand, 14729110 - 14728982
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacgg 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| |||||||||||||  |    
T  14729110 acgattgatccaggattctgaaaccctagatcaaacggccaggaa-caaaagggactggaccggtcttggaccggtccggttcactggcttataaaagtg 14729012  T
Q  460 aaggagctccggttttttccattttccact 489  Q
    ||||| | |||||||| | |||||| ||||    
T  14729011 aaggaacaccggttttcttcatttttcact 14728982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 361 - 495
Target Start/End: Original strand, 4564872 - 4565006
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacgg 459  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||| | ||||||||||||||||||||||||||||||       
T  4564872 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaaagggattggaccggtcttggaccggtccggttcgctggcttataaaagca 4564970  T
Q  460 aaggagctccggttttttccattttccactttcctt 495  Q
    |  ||||||||||||||||  ||||| |||| ||||    
T  4564971 acagagctccggttttttcatttttctacttccctt 4565006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 361 - 495
Target Start/End: Complemental strand, 48916950 - 48916816
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaacgg 459  Q
    |||||||||||||||| || |||||||||||||||||||||||||  |||||| ||||||||||  ||||||||||||||||| | ||| |||| || ||    
T  48916950 acgattgatccaggatcctaaaaccctagatcaaacggccaggaacaaaagggaaatggaccggttctggaccggtccggttcacgggc-tatataaggg 48916852  T
Q  460 aaggagctccggttttttccattttccactttcctt 495  Q
    || | |||||||||||||||||||| ||||||||||    
T  48916851 aaagggctccggttttttccatttttcactttcctt 48916816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 380 - 484
Target Start/End: Original strand, 9480279 - 9480382
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    ||||||||||||| ||||||||||||| || || || |||||||| | |||||||||||||||| |||||| |||||| ||||||||||||||||||||     
T  9480279 gaaaccctagatccaacggccaggaatgaa-ggagattggaccggtcctggaccggtccggttcactggct-ataaaaaggaaggagctccggttttttt 9480376  T
Q  479 catttt 484  Q
    ||||||    
T  9480377 catttt 9480382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 450
Target Start/End: Original strand, 24464110 - 24464212
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaat-ggaccgg-actggaccggtccggttcgctgg 447  Q
    ||||| || |||||||||||||||| | |||||||||||||||||||||||||||| ||| ||||  | |||||||  ||| ||||||||||||| ||||    
T  24464110 acaggaaccacacgattgatccagggtcctgaaaccctagatcaaacggccaggaaccaaggggggttgggaccggtcctgaaccggtccggttcactgg 24464209  T
Q  448 ctt 450  Q
    |||    
T  24464210 ctt 24464212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 381 - 456
Target Start/End: Complemental strand, 15386501 - 15386426
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||| ||||||||||||| || ||||| |||||||| || ||||||||||||||| |||||||||||||    
T  15386501 aaaccctagatccaacggccaggaatgaa-ggggattggaccggtcttggaccggtccggttcactggcttataaaa 15386426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 9248749 - 9248822
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||||  ||||||| |||||||| | |||||||||||||||| ||||||||||    
T  9248749 gaaaccctagatccaacggccaggaat-gaaggggattggaccggtcttggaccggtccggttcactggcttata 9248822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 18028679 - 18028752
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||||  ||||||| |||||||| | |||||||||||||||| ||||||||||    
T  18028679 gaaaccctagatccaacggccaggaat-gaaggggattggaccggtcttggaccggtccggttcactggcttata 18028752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 19640520 - 19640593
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| || ||||||||||||||| ||||||||||    
T  19640520 gaaaccctagatccaacggccaggaa-cgaaggggattggaccggtcttggaccggtccggttcactggcttata 19640593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 381 - 478
Target Start/End: Complemental strand, 20756564 - 20756467
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    ||||||||||||||||||||||||||  ||||| | |||||||| | |||||||||||||||| ||||| ||||||| |   ||||| |||||||||||    
T  20756564 aaaccctagatcaaacggccaggaat-gaagggaattggaccggtcttggaccggtccggttcactggcctataaaaggaggggagcgccggttttttc 20756467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 381 - 478
Target Start/End: Complemental strand, 20762642 - 20762545
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    ||||||||||||||||||||||||||  ||||| | ||||||||  ||||||||||||||||| ||||| |||||||   | ||||| |||||||||||    
T  20762642 aaaccctagatcaaacggccaggaat-gaagggaattggaccggtcctggaccggtccggttcactggcctataaaagaaagggagcgccggttttttc 20762545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 456
Target Start/End: Complemental strand, 1670086 - 1670011
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||| ||||||||||||| || ||||| |||||||| || ||||||||||||||| ||||| |||||||    
T  1670086 aaaccctagatccaacggccaggaatgaa-ggggattggaccggtcttggaccggtccggttcactggcctataaaa 1670011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 5704449 - 5704403
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||    
T  5704449 gattgatccagggtcctgaaaccctagatcaaacggcctggaatcaa 5704403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 34854886 - 34854813
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| ||||||||||||  |||||| | |||||||| || ||||||||||||||| ||||||||||    
T  34854886 gaaaccctagatccaacggccaggaacgaaaggg-attggaccggtcttggaccggtccggttcactggcttata 34854813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 456
Target Start/End: Original strand, 26407933 - 26408009
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||| |||||||||||||  ||||||| ||||| || | |||||||||||||||| ||||| |||||||    
T  26407933 gaaaccctagatccaacggccaggaat-gaaggggattggactggtcttggaccggtccggttcactggcctataaaa 26408009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 456
Target Start/End: Complemental strand, 17094252 - 17094177
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||| ||||||||||||| || ||| | |||||||| | |||||||||||||||| ||||| |||||||    
T  17094252 aaaccctagatccaacggccaggaatgaa-gggaattggaccggtcctggaccggtccggttcactggcctataaaa 17094177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 14749845 - 14749914
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || |||||||| | |||||||||||||||| ||||||    
T  14749845 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcttggaccggtccggttcactggct 14749914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 14768948 - 14769017
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || |||||||| | |||||||||||||||| ||||||    
T  14768948 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcttggaccggtccggttcactggct 14769017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 43151087 - 43151018
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || ||||||||  ||||||||||||||||| ||||||    
T  43151087 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcctggaccggtccggttcactggct 43151018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 453
Target Start/End: Original strand, 18466003 - 18466075
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttata 453  Q
    ||||||||||||||||||||||| ||  ||||| ||||||||||   |||||||||||||||| ||||| ||||    
T  18466003 aaaccctagatcaaacggccagg-attgaagggaaatggaccggttttggaccggtccggttcactggcctata 18466075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 484
Target Start/End: Original strand, 22112559 - 22112662
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    |||||||| |||| |||||||||||| ||||||||  |||||||| | || ||||||||||||| ||||||| ||||| ||  ||| ||||| ||||||     
T  22112559 gaaaccctggatccaacggccaggaa-caaagggggttggaccggtcttgaaccggtccggttcactggctt-taaaaaggggggaactccgattttttt 22112656  T
Q  479 catttt 484  Q
    ||||||    
T  22112657 catttt 22112662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 247; Significance: 1e-137; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 82 - 495
Target Start/End: Complemental strand, 16669064 - 16668652
Alignment:
Q  82 caatcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaa 181  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||    
T  16669064 caatcataagaaataatccaagaaagaattaaaatgccatggattaatcatacaagaattttgccacttccaatatgcaaaaataccataaaa-catcaa 16668966  T
Q  182 gaaaatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaa 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  16668965 gaaaatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagaagaacagtgcaaatagcaa 16668866  T
Q  282 gacaagaggcagaaacgcacaagaaacctaggcccaaaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctga 381  Q
    |||||||| ||||||  |||||||||||||||||||||||||| |||||| | | ||     | | | |||||  | |||||||||||| ||||| ||||    
T  16668865 gacaagagacagaaatacacaagaaacctaggcccaaaccaaagcccaaaactacaaggtccggatgcacaggagccacacgattgatctaggatcctga 16668766  T
Q  382 aaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaacggaaggagctccggttttttcca 480  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||||||  ||||| |  |||||||    ||    
T  16668765 aaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggc-tataaaagtgaagggggaccggtttaaatca 16668667  T
Q  481 ttttccactttcctt 495  Q
    |||||||||||||||    
T  16668666 ttttccactttcctt 16668652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 82 - 495
Target Start/End: Complemental strand, 16684346 - 16683934
Alignment:
Q  82 caatcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaa 181  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||    
T  16684346 caatcataagaaataatccaagaaagaattaaaatgccatggattaatcatacaagaattttgccacttccaatatgcaaaaataccataaaa-catcaa 16684248  T
Q  182 gaaaatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaa 281  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  16684247 gaaaatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagaagaacagtgcaaatagcaa 16684148  T
Q  282 gacaagaggcagaaacgcacaagaaacctaggcccaaaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctga 381  Q
    |||||||| ||||||  |||||||||||||||||||||||||| |||||| | | ||     | | | |||||  | |||||||||||| ||||| ||||    
T  16684147 gacaagagacagaaatacacaagaaacctaggcccaaaccaaagcccaaaactacaaggtccggatgcacaggagccacacgattgatctaggatcctga 16684048  T
Q  382 aaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaacggaaggagctccggttttttcca 480  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||||||  ||||| |  |||||||    ||    
T  16684047 aaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggc-tataaaagtgaagggggaccggtttaaatca 16683949  T
Q  481 ttttccactttcctt 495  Q
    |||||||||||||||    
T  16683948 ttttccactttcctt 16683934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 18 - 278
Target Start/End: Complemental strand, 29496392 - 29496136
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||        ||||||||||||||||||| |||| ||||||||||    
T  29496392 acattaacatgtcaaatggcatttatcacatattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatg 29496296  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    ||||||||||||||| |||||||||||||||| |||   |||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  29496295 ccatggattaatcatgcaagaattttgccaattccagcgtgcaaaaataccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaa 29496197  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatag 278  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  29496196 atttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatag 29496136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 18 - 278
Target Start/End: Complemental strand, 29511730 - 29511474
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||        ||||||||||||||||||| |||| ||||||||||    
T  29511730 acattaacatgtcaaatggcatttatcacatattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatg 29511634  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    ||||||||||||||| |||||||||||||||| |||   |||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||    
T  29511633 ccatggattaatcatgcaagaattttgccaattccagcgtgcaaaaataccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaa 29511535  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatag 278  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  29511534 atttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatag 29511474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 29567994 - 29567739
Alignment:
Q  19 cattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatgc 118  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||        ||||||||||||||||||| |||| |||||||||||    
T  29567994 cattaacatgtcaaatggcatttatcacatattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatgc 29567898  T
Q  119 catggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaaa 218  Q
    ||||||||||||||||||||||||||||||| |||   |||||||| ||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  29567897 catggattaatcatacaagaattttgccaattccagcgtgcaaaaacaccgtaaaa-catcaagaaaatgtcaagaagtaaacatggattttctaggaaa 29567799  T
Q  219 tttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatag 278  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  29567798 tttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatag 29567739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 29583400 - 29583145
Alignment:
Q  19 cattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatgc 118  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||        ||||||||||||||||||| |||| |||||||||||    
T  29583400 cattaacatgtcaaatggcatttatcacatattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatgc 29583304  T
Q  119 catggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaaa 218  Q
    ||||||||||||||||||||||||||||||| |||   |||||||| ||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  29583303 catggattaatcatacaagaattttgccaattccagcgtgcaaaaacaccgtaaaa-catcaagaaaatgtcaagaagtaaacatggattttctaggaaa 29583205  T
Q  219 tttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatag 278  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  29583204 tttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatag 29583145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 281
Target Start/End: Complemental strand, 27480123 - 27479864
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||| |||| ||||||||||    
T  27480123 acattaacatgtcaaatggcatttatcacatattcgcaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatg 27480027  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||| ||| |||   |||||||| ||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  27480026 ccatggattaatcatacaagaattttgctaattccagcgtgcaaaaacaccataaaa-catcgagaaaatgtcaagaagtaagcatggattttctaggaa 27479928  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaa 281  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  27479927 atttatcaaaatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagcaa 27479864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 281
Target Start/End: Complemental strand, 27495377 - 27495118
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||        ||||||||||||||||||| |||| ||||||||||    
T  27495377 acattaacatgtcaaatggcatttatcacatattcgcaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatg 27495281  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||| ||| |||   |||||||| ||||||||| |||| ||||||| |||||||||||||||||||||||||||||    
T  27495280 ccatggattaatcatacaagaattttgctaattccagcgtgcaaaaacaccataaaa-catcgagaaaatgtcaagaagtaagcatggattttctaggaa 27495182  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaa 281  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  27495181 atttatcaaaatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagcaa 27495118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 361 - 484
Target Start/End: Original strand, 26106745 - 26106869
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaagggg-aatggaccggactggaccggtccggttcgctggcttataaaacgg 459  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  26106745 acgattgatccaggattctgaaaccctagatcagacggccaggaatcaaagggggaatggaccggactggaccggtccggttcgctggcttataaaaagg 26106844  T
Q  460 aaggagctccggttttttccatttt 484  Q
    ||||||||||||||| || ||||||    
T  26106845 aaggagctccggtttatttcatttt 26106869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 361 - 484
Target Start/End: Original strand, 26121977 - 26122101
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaagggg-aatggaccggactggaccggtccggttcgctggcttataaaacgg 459  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  26121977 acgattgatccaggattctgaaaccctagatcagacggccaggaatcaaagggggaatggaccggactggaccggtccggttcgctggcttataaaaagg 26122076  T
Q  460 aaggagctccggttttttccatttt 484  Q
    ||||||||||||||| || ||||||    
T  26122077 aaggagctccggtttatttcatttt 26122101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 350 - 483
Target Start/End: Complemental strand, 4453452 - 4453320
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 449  Q
    ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4453452 acaggaaccacacgattgatccaggattctgaaaccctggatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggc- 4453354  T
Q  450 tataaaacggaaggagctccggttttttccattt 483  Q
    |||||||  |||||||| ||||||| || |||||    
T  4453353 tataaaaacgaaggagcaccggtttatttcattt 4453320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 361 - 483
Target Start/End: Original strand, 28977744 - 28977865
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacgga 460  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||    
T  28977744 acgattgatccaggattctgaaaccctggatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggc-tataaaaacga 28977842  T
Q  461 aggagctccggttttttccattt 483  Q
    |||||| ||||||| || |||||    
T  28977843 aggagcaccggtttatttcattt 28977865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 359 - 453
Target Start/End: Complemental strand, 27067389 - 27067295
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttata 453  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  27067389 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaagagggatggaccggactggaccggtccggttcgctggcttata 27067295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 359 - 453
Target Start/End: Complemental strand, 27039050 - 27038956
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttata 453  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  27039050 acacgattgatccaggattctgaaaccccagatcaaacggccaggaatcaaagagggatggaccggactggaccggtccggttcgctggcttata 27038956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 363 - 452
Target Start/End: Original strand, 30970293 - 30970381
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttat 452  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  30970293 gattgatccagggttctgaaaccctagatcaaacggccaggaa-caaaggggaatggaccggactggaccggtccggttcactggcttat 30970381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 16564227 - 16564139
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttat 452  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  16564227 gattgatccagggttctgaaaccctagatcaaacggccaggaa-caaaggggaatggaccggactggaccggtccggtttactggcttat 16564139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 85 - 281
Target Start/End: Original strand, 32781757 - 32781951
Alignment:
Q  85 tcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaa 184  Q
    |||||||||||||||||  ||||||||||||||| ||| || |||| ||||||| ||||  ||| | ||||||||| ||||  |||||||||||||||||    
T  32781757 tcataagaaataatccaaaaaagaattaaaatgctatgaatcaatcgtacaaga-ttttatcaacctcaatatgcagaaatgtcataaaaacatcaagaa 32781855  T
Q  185 aatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaa 281  Q
    || ||||| ||| ||||||| ||| | ||| || |||||||| |||||| ||||||  | ||||||||||||| |||| |||| |||||||||||||    
T  32781856 aacatcaaaaagcaagcatgaattctttagaaattttatcaaaatttttgatcaaagtactggttcaaatagc-aagaaaaacggtgcaaatagcaa 32781951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 360 - 449
Target Start/End: Original strand, 16934469 - 16934559
Alignment:
Q  360 cacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  16934469 cacgattgatccaggatcataaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggct 16934559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 360 - 449
Target Start/End: Original strand, 16949578 - 16949668
Alignment:
Q  360 cacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  16949578 cacgattgatccaggatcataaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggct 16949668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 361 - 487
Target Start/End: Original strand, 33377711 - 33377837
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacgg 459  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||| | ||||||| |||||||| || ||||||| ||       
T  33377711 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaaagggactggaccggtcttggaccgatccggttcactagcttatataaaca 33377809  T
Q  460 aaggagctccggttttttccattttcca 487  Q
    |  |||| ||||||||||||||||||||    
T  33377810 agagagcaccggttttttccattttcca 33377837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 361 - 452
Target Start/End: Original strand, 13514616 - 13514706
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttat 452  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| || ||||||    
T  13514616 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggtcttggaccggtccggttcactagcttat 13514706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 361 - 452
Target Start/End: Original strand, 13525519 - 13525609
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttat 452  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| || ||||||    
T  13525519 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggtcttggaccggtccggttcactagcttat 13525609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 450
Target Start/End: Complemental strand, 28202096 - 28202005
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggctt 450  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||  ||||||||  ||| ||||||||||||| |||||||    
T  28202096 acacgattgatctaggattctggaaccctagatcaaacggccaggaa-caaagggggttggaccggtcctgaaccggtccggttcactggctt 28202005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 450
Target Start/End: Complemental strand, 28217164 - 28217073
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggctt 450  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||  ||||||||  ||| ||||||||||||| |||||||    
T  28217164 acacgattgatctaggattctggaaccctagatcaaacggccaggaa-caaagggggttggaccggtcctgaaccggtccggttcactggctt 28217073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 24048273 - 24048363
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  24048273 acacgattgatctaggattctgaaaccctagatcaaacggccgggaa-caagggggactggaccggaaataaaccggtccggttcactggct 24048363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 361 - 424
Target Start/End: Original strand, 33366439 - 33366501
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg 424  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||    
T  33366439 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaaagggactggaccgg 33366501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 450
Target Start/End: Original strand, 27351936 - 27352038
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaa-aggggaatggaccgg-actggaccggtccggttcgctgg 447  Q
    ||||| || |||||||||||||||| | |||||||||||||||||||||||||||| |||  ||||  ||||||||  ||| ||||||||||||| ||||    
T  27351936 acaggaaccacacgattgatccagggtcctgaaaccctagatcaaacggccaggaaccaagggggggttggaccggtcctgaaccggtccggttcactgg 27352035  T
Q  448 ctt 450  Q
    |||    
T  27352036 ctt 27352038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 450
Target Start/End: Original strand, 27364049 - 27364151
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaa-aggggaatggaccgg-actggaccggtccggttcgctgg 447  Q
    ||||| || |||||||||||||||| | |||||||||||||||||||||||||||| |||  ||||  ||||||||  ||| ||||||||||||| ||||    
T  27364049 acaggaaccacacgattgatccagggtcctgaaaccctagatcaaacggccaggaaccaagggggggttggaccggtcctgaaccggtccggttcactgg 27364148  T
Q  448 ctt 450  Q
    |||    
T  27364149 ctt 27364151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 450
Target Start/End: Original strand, 27454392 - 27454494
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaa-aggggaatggaccgg-actggaccggtccggttcgctgg 447  Q
    ||||| || |||||||||||||||| | |||||||||||||||||||||||||||| |||  ||||  ||||||||  ||| ||||||||||||| ||||    
T  27454392 acaggaaccacacgattgatccagggtcctgaaaccctagatcaaacggccaggaaccaagggggggttggaccggtcctgaaccggtccggttcactgg 27454491  T
Q  448 ctt 450  Q
    |||    
T  27454492 ctt 27454494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 381 - 456
Target Start/End: Complemental strand, 26913173 - 26913098
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||| |||||||||||| | ||||||| |||||||| || ||||||||||||||| |||||||||||||    
T  26913173 aaaccctagatccaacggccaggaa-cgaaggggactggaccggtcttggaccggtccggttcactggcttataaaa 26913098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 381 - 456
Target Start/End: Complemental strand, 26930460 - 26930385
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||| |||||||||||| | ||||||| |||||||| || ||||||||||||||| |||||||||||||    
T  26930460 aaaccctagatccaacggccaggaa-cgaaggggactggaccggtcttggaccggtccggttcactggcttataaaa 26930385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 4519963 - 4519917
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  4519963 gattgatccaggatcctgaaaccctagatcaaacggcctggaatcaa 4519917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 4535150 - 4535104
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  4535150 gattgatccaggatcctgaaaccctagatcaaacggcctggaatcaa 4535104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 456
Target Start/End: Original strand, 16346151 - 16346227
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| | |||||||||||||||| || ||||||||||    
T  16346151 gaaaccctagatccaacggccaggaa-cgaaggggattggaccggtcttggaccggtccggttcacttgcttataaaa 16346227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 453
Target Start/End: Complemental strand, 12616618 - 12616547
Alignment:
Q  382 aaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttata 453  Q
    ||||||||||| |||||||||||| | ||||||| |||||||| || ||||||||||||||| ||||||||||    
T  12616618 aaccctagatccaacggccaggaa-cgaaggggattggaccggtcttggaccggtccggttcactggcttata 12616547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 26502003 - 26501930
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| ||||||||||||| || ||||| |||| ||| || ||||||||||||||| ||||||||||    
T  26502003 gaaaccctagatccaacggccaggaatgaa-ggggattggaacggtcttggaccggtccggttcactggcttata 26501930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 26784002 - 26783881
Alignment:
Q  157 tgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatgga-ttttctaggaaatttatcaagatttttaatcaaaacattggttcaaata 255  Q
    |||||||||  ||||||||||  ||||||||||||||||  | | ||| | |||||||||||||||||| | | |||||||||| |||| ||| ||  ||    
T  26784002 tgcaaaaatgtcataaaaacactaagaaaatatcaagaaacatgtatgaatttttctaggaaatttatc-acaattttaatcaagacataggtgcaggta 26783904  T
Q  256 gcaaagagaaacagtgcaaatag 278  Q
    ||||| | |||||||||||||||    
T  26783903 gcaaaaaaaaacagtgcaaatag 26783881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 26795975 - 26795854
Alignment:
Q  157 tgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatgga-ttttctaggaaatttatcaagatttttaatcaaaacattggttcaaata 255  Q
    |||||||||  ||||||||||  ||||||||||||||||  | | ||| | |||||||||||||||||| | | |||||||||| |||| ||| ||  ||    
T  26795975 tgcaaaaatgtcataaaaacactaagaaaatatcaagaaacatgtatgaatttttctaggaaatttatc-acaattttaatcaagacataggtgcaggta 26795877  T
Q  256 gcaaagagaaacagtgcaaatag 278  Q
    ||||| | |||||||||||||||    
T  26795876 gcaaaaaaaaacagtgcaaatag 26795854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 34472298 - 34472371
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||| | ||||||| |||||| | || ||||||||||||||| ||||||||||    
T  34472298 gaaaccctagatccaacggccaggaa-cgaaggggattggaccagtcttggaccggtccggttcactggcttata 34472371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 18939695 - 18939623
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttat 452  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| | || ||||||||||||| |||||||||    
T  18939695 gaaaccctagatccaacggccaggaa-cgaaggggattggaccggtcttgaaccggtccggttcactggcttat 18939623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 382 - 453
Target Start/End: Original strand, 18815946 - 18816017
Alignment:
Q  382 aaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttata 453  Q
    ||||||||||| |||||||||||| | ||||||| ||||||||  | ||||||||||||||| ||||||||||    
T  18815946 aaccctagatccaacggccaggaa-cgaaggggattggaccggttttggaccggtccggttcactggcttata 18816017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 450
Target Start/End: Original strand, 27293719 - 27293789
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggctt 450  Q
    ||||||||||||| |||||||||||||   |||||| |||||||| | |||||||||||||||| |||||||    
T  27293719 gaaaccctagatccaacggccaggaat-ggaggggattggaccggtcttggaccggtccggttcactggctt 27293789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 20216263 - 20216194
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || ||||||||  ||||||||||||||||| ||||||    
T  20216263 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcctggaccggtccggttcactggct 20216194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 22110284 - 22110215
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || ||||||||  ||||||||||||||||| ||||||    
T  22110284 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcctggaccggtccggttcactggct 22110215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 29544086 - 29544017
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || ||||||||  ||||||||||||||||| ||||||    
T  29544086 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcctggaccggtccggttcactggct 29544017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 29559496 - 29559427
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || ||||||||  ||||||||||||||||| ||||||    
T  29559496 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcctggaccggtccggttcactggct 29559427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 31545287 - 31545218
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || ||||||||  ||||||||||||||||| ||||||    
T  31545287 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcctggaccggtccggttcactggct 31545218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 453
Target Start/End: Complemental strand, 923546 - 923474
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttata 453  Q
    ||||||||||||||||||||||| ||  ||||| ||||||||||   |||||||||||||||| ||||| ||||    
T  923546 aaaccctagatcaaacggccagg-attgaagggaaatggaccggttttggaccggtccggttcactggcctata 923474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 82 - 495
Target Start/End: Original strand, 18490650 - 18491062
Alignment:
Q  82 caatcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaa 181  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||    
T  18490650 caatcataagaaataatccaagaaagaattaaaatgccatggattaatcatacaagaattttgccacttccaatatgcaaaaataccataaaa-catcaa 18490748  T
Q  182 gaaaatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaa 281  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||  ||| |||||||||||||    
T  18490749 gaaaatatcaagaagtaagcatggattttctaggaattttatcaagatttttaatcaaaacactggttcaaatagcaaagaagaacggtgcaaatagcaa 18490848  T
Q  282 gacaagaggcagaaacgcacaagaaacctaggcccaaaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctga 381  Q
    |||||||| || ||| ||||||||||||||||||||||||||| |||||| | | ||     | | | |||||  | |||||||||||| ||||| ||||    
T  18490849 gacaagagacaaaaatgcacaagaaacctaggcccaaaccaaagcccaaaactacaaggtccggatgcacaggagccacacgattgatctaggatcctga 18490948  T
Q  382 aaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaacggaaggagctccggttttttcca 480  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||  |||| |||||||  ||||| |  |||||||    ||    
T  18490949 aaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcattggc-tataaaagtgaagggggaccggtttaaatca 18491047  T
Q  481 ttttccactttcctt 495  Q
    |||||||||||||||    
T  18491048 ttttccactttcctt 18491062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 82 - 495
Target Start/End: Original strand, 18505965 - 18506377
Alignment:
Q  82 caatcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaa 181  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||    
T  18505965 caatcataagaaataatccaagaaagaattaaaatgccatggattaatcatacaagaattttgccacttccaatatgcaaaaataccataaaa-catcaa 18506063  T
Q  182 gaaaatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaa 281  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||  ||| |||||||||||||    
T  18506064 gaaaatatcaagaagtaagcatggattttctaggaattttatcaagatttttaatcaaaacactggttcaaatagcaaagaagaacggtgcaaatagcaa 18506163  T
Q  282 gacaagaggcagaaacgcacaagaaacctaggcccaaaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctga 381  Q
    |||||||| || ||| ||||||||||||||||||||||||||| |||||| | | ||     | | | |||||  | |||||||||||| ||||| ||||    
T  18506164 gacaagagacaaaaatgcacaagaaacctaggcccaaaccaaagcccaaaactacaaggtccggatgcacaggagccacacgattgatctaggatcctga 18506263  T
Q  382 aaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaacggaaggagctccggttttttcca 480  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||  |||| |||||||  ||||| |  |||||||    ||    
T  18506264 aaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcattggc-tataaaagtgaagggggaccggtttaaatca 18506362  T
Q  481 ttttccactttcctt 495  Q
    |||||||||||||||    
T  18506363 ttttccactttcctt 18506377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 283
Target Start/End: Complemental strand, 43073243 - 43072980
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||    
T  43073243 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacaaaaaa-caatcataagaaataatccaagaaagaattaaaatg 43073145  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43073144 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaa-catcaagaaaatatcaagaagtaagcatggattttctaggaa 43073046  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaaga 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  43073045 atttatcaagatttttaatcaaaacattggttcaaatagcaaagaagaacagtgcaaatagcaaga 43072980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 283
Target Start/End: Complemental strand, 43088530 - 43088267
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||    
T  43088530 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacaaaaaa-caatcataagaaataatccaagaaagaattaaaatg 43088432  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  43088431 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaa-catcaagaaaatatcaagaagtaagcatggattttctaggaa 43088333  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaaga 283  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  43088332 atttatcaagatttttaatcaaaacattggttcaaatagcaaagaagaacagtgcaaatagcaaga 43088267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 12127175 - 12126916
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||       |||||||||||||||||||| |||||||||||||||    
T  12127175 acattaacatatcaaatggcctttatcacattttcacaaatcaatgatagaattgacaaaa---caatcataagaaataatccaagaaagaattaaaatg 12127079  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  12127078 ccatggattaatcatacaagaattttgccaattccagcgtgcaaaaatgccat-aaaacatcaagaaaatgtcaagaagtaagcatggattttctaggaa 12126980  T
Q  218 atttatcaagattttt-aatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||| |||||||||||||||||    
T  12126979 atttatcaagatttttaaatcaagacataggttcaaatagcaaagaaaaacagtgcaaatagca 12126916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 12142428 - 12142169
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||       |||||||||||||||||||| |||||||||||||||    
T  12142428 acattaacatatcaaatggcctttatcacattttcacaaatcaatgatagaattgacaaaa---caatcataagaaataatccaagaaagaattaaaatg 12142332  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  12142331 ccatggattaatcatacaagaattttgccaattccagcgtgcaaaaatgccat-aaaacatcaagaaaatgtcaagaagtaagcatggattttctaggaa 12142233  T
Q  218 atttatcaagatttt-taatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
    |||||||||||||||  |||||| |||| ||||||||||||||||| |||||||||||||||||    
T  12142232 atttatcaagattttcaaatcaagacataggttcaaatagcaaagaaaaacagtgcaaatagca 12142169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 26475413 - 26475154
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||       | |||||||||||||||||| |||||||||||||||    
T  26475413 acattaacatatcaaatggcctttatcacattttcacaaatcaatgatagaattgacaaaa---cgatcataagaaataatccaagaaagaattaaaatg 26475317  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  26475316 ccatggattaatcatacaagaattttgccaattccagcgtgcaaaaatgccat-aaaacatcaagaaaatgtcaagaagtaagcatggattttctaggaa 26475218  T
Q  218 atttatcaagattttt-aatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||| |||||||||||||||||    
T  26475217 atttatcaagatttttaaatcaagacataggttcaaatagcaaagaaaaacagtgcaaatagca 26475154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 26490461 - 26490202
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||       | |||||||||||||||||| |||||||||||||||    
T  26490461 acattaacatatcaaatggcctttatcacattttcacaaatcaatgatagaattgacaaaa---cgatcataagaaataatccaagaaagaattaaaatg 26490365  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  26490364 ccatggattaatcatacaagaattttgccaattccagcgtgcaaaaatgccat-aaaacatcaagaaaatgtcaagaagtaagcatggattttctaggaa 26490266  T
Q  218 atttatcaagattttt-aatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||| |||||||||||||||||    
T  26490265 atttatcaagatttttaaatcaagacataggttcaaatagcaaagaaaaacagtgcaaatagca 26490202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 9312473 - 9312214
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||       |||||||||||||||||||| |||||||||||||||    
T  9312473 acattaacatatcaaatggcttttatcacattttcacaaatcaatgatagaattgacaaaa---caatcataagaaataatccaagaaagaattaaaatg 9312377  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  9312376 ccatggattaatcatacaagaattttgccaattccagcgtgcaaaaatgccat-aaaacatcaagaaaatgtcaagaagtaagcatggattttctaggaa 9312278  T
Q  218 atttatcaagattttt-aatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
    |||||||||||||||| ||||||  ||| ||||||||||||||||| |||||||||||||||||    
T  9312277 atttatcaagatttttaaatcaagtcataggttcaaatagcaaagaaaaacagtgcaaatagca 9312214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 18 - 280
Target Start/End: Complemental strand, 9327732 - 9327473
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||       |||||||||||||||||||| |||||||||||||||    
T  9327732 acattaacatatcaaatggcttttatcacattttcacaaatcaatgatagaattgacaaaa---caatcataagaaataatccaagaaagaattaaaatg 9327636  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  9327635 ccatggattaatcatacaagaattttgccaattccagcgtgcaaaaatgccat-aaaacatcaagaaaatgtcaagaagtaagcatggattttctaggaa 9327537  T
Q  218 atttatcaagattttt-aatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
    |||||||||||||||| ||||||  ||| ||||||||||||||||| |||||||||||||||||    
T  9327536 atttatcaagatttttaaatcaagtcataggttcaaatagcaaagaaaaacagtgcaaatagca 9327473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 24676415 - 24676160
Alignment:
Q  19 cattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatgc 118  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||        ||||||||||||||||||| |||| |||||||||||    
T  24676415 cattaacatgtcaaatggcatttatcacgtattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatgc 24676319  T
Q  119 catggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaaa 218  Q
    |||||||||||||||||| |||||||||||| |||   |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  24676318 catggattaatcatacaaaaattttgccaattccagcgtgcaaaaataccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaaa 24676220  T
Q  219 tttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatag 278  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  24676219 tttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatag 24676160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 24718942 - 24718687
Alignment:
Q  19 cattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatgc 118  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||        ||||||||||||||||||| |||| |||||||||||    
T  24718942 cattaacatgtcaaatggcatttatcacgtattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatgc 24718846  T
Q  119 catggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaaa 218  Q
    |||||||||||||||||| |||||||||||| |||   |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  24718845 catggattaatcatacaaaaattttgccaattccagcgtgcaaaaataccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaaa 24718747  T
Q  219 tttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatag 278  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  24718746 tttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatag 24718687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 24734402 - 24734147
Alignment:
Q  19 cattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatgc 118  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||        ||||||||||||||||||| |||| |||||||||||    
T  24734402 cattaacatgtcaaatggcatttatcacgtattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatgc 24734306  T
Q  119 catggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaaa 218  Q
    |||||||||||||||||| |||||||||||| |||   |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  24734305 catggattaatcatacaaaaattttgccaattccagcgtgcaaaaataccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaaa 24734207  T
Q  219 tttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatag 278  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  24734206 tttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatag 24734147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 28949549 - 28949808
Alignment:
Q  19 cattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaa-ttaaaatg 117  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||        ||||||||||||||||||| |||| || ||||||||    
T  28949549 cattaacatatcaaatggtcttcatcacatattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaaattaaaatg 28949645  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaata-tcaagaagtaagcatggattttctagga 216  Q
    |||||||||||||||||||||||||||||||| |||   |||||||||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  28949646 ccatggattaatcatacaagaattttgccaattccagcgtgcaaaaataccgtaaaa-catcaagaaaattgtcaagaagtaagcatggattttctagga 28949744  T
Q  217 aatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  28949745 aatttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagca 28949808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 28965773 - 28966032
Alignment:
Q  19 cattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaa-ttaaaatg 117  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||        ||||||||||||||||||| |||| || ||||||||    
T  28965773 cattaacatatcaaatggtcttcatcacatattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaaattaaaatg 28965869  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaata-tcaagaagtaagcatggattttctagga 216  Q
    |||||||||||||||||||||||||||||||| |||   |||||||||||| ||||| ||||||||||||  ||||||||||||||||||||||||||||    
T  28965870 ccatggattaatcatacaagaattttgccaattccagcgtgcaaaaataccgtaaaa-catcaagaaaattgtcaagaagtaagcatggattttctagga 28965968  T
Q  217 aatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  28965969 aatttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagca 28966032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 350 - 484
Target Start/End: Complemental strand, 37726692 - 37726559
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 449  Q
    ||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  37726692 acaggaaccacacgattgatccaggattctggaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctagc- 37726594  T
Q  450 tataaaacggaaggagctccggttttttccatttt 484  Q
    ||||||| ||||||||||||||||| || ||||||    
T  37726593 tataaaaaggaaggagctccggtttatttcatttt 37726559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 350 - 456
Target Start/End: Original strand, 12056107 - 12056213
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 449  Q
    ||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12056107 acaggaaccacacgattgatccaggattttgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 12056206  T
Q  450 tataaaa 456  Q
    |||||||    
T  12056207 tataaaa 12056213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 85 - 259
Target Start/End: Complemental strand, 37650405 - 37650232
Alignment:
Q  85 tcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaa 184  Q
    |||||||||||||||||  ||||||||||||||| ||| ||||||||||||||| | ||  ||| | ||||||||||||||  |||||||||||||||||    
T  37650405 tcataagaaataatccaa-aaagaattaaaatgctatgaattaatcatacaagattcttatcaacctcaatatgcaaaaatgtcataaaaacatcaagaa 37650307  T
Q  185 aatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaa 259  Q
    |||||||| ||| ||||||| ||||||||| || ||||||||||||||| |||||| || |||||||||||||||    
T  37650306 aatatcaaaaagcaagcatgaattttctagaaattttatcaagatttttgatcaaagcactggttcaaatagcaa 37650232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 359 - 453
Target Start/End: Complemental strand, 30146670 - 30146576
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttata 453  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  30146670 acacgattgatccaggattctgaaaccctagatcaagcggccaggaatcaaaggggaatggaccggattgaaccggtccggttcgctggcttata 30146576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 359 - 453
Target Start/End: Complemental strand, 30161881 - 30161787
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttata 453  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  30161881 acacgattgatccaggattctgaaaccctagatcaagcggccaggaatcaaaggggaatggaccggattgaaccggtccggttcgctggcttata 30161787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 350 - 478
Target Start/End: Original strand, 18118912 - 18119039
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 449  Q
    ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  18118912 acaggaaccacatgattgatccaggattctgaaaccctagatcaaacggccaggaa-caaaggggaatggaccggactggaccggtccggttcactggct 18119010  T
Q  450 tataaaacggaaggagctccggttttttc 478  Q
    |||| ||   || |||| |||||||||||    
T  18119011 tatataaacaaaagagcaccggttttttc 18119039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 350 - 478
Target Start/End: Original strand, 18129292 - 18129419
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 449  Q
    ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  18129292 acaggaaccacatgattgatccaggattctgaaaccctagatcaaacggccaggaa-caaaggggaatggaccggactggaccggtccggttcactggct 18129390  T
Q  450 tataaaacggaaggagctccggttttttc 478  Q
    |||| ||   || |||| |||||||||||    
T  18129391 tatataaacaaaagagcaccggttttttc 18129419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 359 - 453
Target Start/End: Complemental strand, 43072903 - 43072809
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttata 453  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||    
T  43072903 acacgattgatccaggatcctaaaaccctagatcaaacggccaggaatcaaaggagaatggaccggattgaaccggtccggttcgctggcttata 43072809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 359 - 453
Target Start/End: Complemental strand, 43088190 - 43088096
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttata 453  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||    
T  43088190 acacgattgatccaggatcctaaaaccctagatcaaacggccaggaatcaaaggagaatggaccggattgaaccggtccggttcgctggcttata 43088096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 359 - 495
Target Start/End: Original strand, 13432861 - 13432997
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaac 457  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||||||     
T  13432861 acacgattgatccagggtcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggc-tataaaag 13432959  T
Q  458 ggaaggagctccggttttttccattttccactttcctt 495  Q
     ||||| |  |||||||    |||||||||||||||||    
T  13432960 tgaagggggaccggtttaaatcattttccactttcctt 13432997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 359 - 495
Target Start/End: Original strand, 13443755 - 13443891
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaac 457  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| |||||||     
T  13443755 acacgattgatccagggtcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggc-tataaaag 13443853  T
Q  458 ggaaggagctccggttttttccattttccactttcctt 495  Q
     ||||| |  |||||||    |||||||||||||||||    
T  13443854 tgaagggggaccggtttaaatcattttccactttcctt 13443891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 360 - 495
Target Start/End: Complemental strand, 3784205 - 3784070
Alignment:
Q  360 cacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacg 458  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||| |||||||| | ||||||||||||||||||||||||||||||      
T  3784205 cacgattgatccaggattctaaaaccctagatcaaacggccaggaa-caaaagggattggaccggtcttggaccggtccggttcgctggcttataaaagc 3784107  T
Q  459 gaaggagctccggttttttccattttccactttcctt 495  Q
     |  ||||||||||||||||  ||||| |||| ||||    
T  3784106 aacagagctccggttttttcatttttctacttccctt 3784070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 360 - 495
Target Start/End: Complemental strand, 3799560 - 3799425
Alignment:
Q  360 cacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacg 458  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||| |||| |||||||| | ||||||||||||||||||||||||||||||      
T  3799560 cacgattgatccaggattctaaaaccctagatcaaacggccaggaa-caaaagggattggaccggtcttggaccggtccggttcgctggcttataaaagc 3799462  T
Q  459 gaaggagctccggttttttccattttccactttcctt 495  Q
     |  ||||||||||||||||  ||||| |||| ||||    
T  3799461 aacagagctccggttttttcatttttctacttccctt 3799425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 359 - 453
Target Start/End: Original strand, 24785719 - 24785814
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttata 453  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| ||||    
T  24785719 acacgattgatccaggatcttgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggcctata 24785814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 85 - 283
Target Start/End: Complemental strand, 41300981 - 41300785
Alignment:
Q  85 tcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaa 184  Q
    |||||||||||||||||  ||||||||||||||| ||| || |||| ||||||| ||||  ||| | ||||||||| ||||  |||||||||||||||||    
T  41300981 tcataagaaataatccaa-aaagaattaaaatgctatgaatcaatcgtacaaga-ttttatcaacctcaatatgcagaaatgtcataaaaacatcaagaa 41300884  T
Q  185 aatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaaga 283  Q
    || ||||| ||| ||||||| ||| | ||| || |||||||| |||||| ||||||  | |||||||||||||||  | |||| |||||||||||||||    
T  41300883 aacatcaaaaagcaagcatgaattctttagaaattttatcaaaatttttgatcaaagtactggttcaaatagcaagaaaaaacggtgcaaatagcaaga 41300785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 453
Target Start/End: Original strand, 32586533 - 32586637
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggc 448  Q
    ||||| || ||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  32586533 acaggaaccacacgatcgatccaggatcttgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggc 32586632  T
Q  449 ttata 453  Q
     ||||    
T  32586633 ctata 32586637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 453
Target Start/End: Original strand, 32604962 - 32605066
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggc 448  Q
    ||||| || ||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  32604962 acaggaaccacacgatcgatccaggatcttgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggc 32605061  T
Q  449 ttata 453  Q
     ||||    
T  32605062 ctata 32605066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 361 - 456
Target Start/End: Complemental strand, 5647594 - 5647499
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| |||||||||||||    
T  5647594 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaaagggactggaccggtcttggaccggtccggttcactggcttataaaa 5647499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 5339849 - 5339940
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| | |  ||||||||||||| ||||||    
T  5339849 acacgattgatctaggattctgaaaccctagatcaaacggccaggaatcaaaggggactggaccggaaataaaccggtccggttcactggct 5339940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 25638547 - 25638638
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| | |  ||||||||||||| ||||||    
T  25638547 acacgattgatctaggattctgaaaccctagatcaaacggccaggaatcaaaggggactggaccggaaataaaccggtccggttcactggct 25638638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 361 - 474
Target Start/End: Original strand, 26445107 - 26445218
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaacgg 459  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||||||||  ||||||||||||||||| ||||| ||||||| ||    
T  26445107 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggttctggaccggtccggttcactggc-tataaaaagg 26445203  T
Q  460 aaggagctccggttt 474  Q
     ||||||||||||||    
T  26445204 gaggagctccggttt 26445218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 37650129 - 37650040
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttat 452  Q
    ||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||| |||||||||    
T  37650129 gattgatccagaatcctgaaaccctagatcaaacggccaggaa-caaaggggaatggaccggttctggaccggtccggttcactggcttat 37650040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 361 - 456
Target Start/End: Complemental strand, 5632720 - 5632625
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| ||| |||| | |||||||||||||||| |||||||||||||    
T  5632720 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaaagggactgggccggtcttggaccggtccggttcactggcttataaaa 5632625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 246 - 357
Target Start/End: Original strand, 42064750 - 42064860
Alignment:
Q  246 ggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggcccaaaccaaaacccaaagccaaaacacagga 345  Q
    |||||| |||||||| |||| | ||||| ||||||||| |||  ||||||||||||||||| |||| |||||| ||||| |||||  |||||||||||||    
T  42064750 ggttcagatagcaaaaagaa-cggtgcagatagcaagaaaaggagcagaaacgcacaagaagcctaagcccaacccaaagcccaacaccaaaacacagga 42064848  T
Q  346 aagtacagggac 357  Q
    ||||||||||||    
T  42064849 aagtacagggac 42064860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 361 - 452
Target Start/End: Complemental strand, 33874009 - 33873919
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttat 452  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| || ||||||    
T  33874009 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggtcttggaccggtccggttcactagcttat 33873919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 361 - 452
Target Start/End: Complemental strand, 33884912 - 33884822
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttat 452  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| || ||||||    
T  33884912 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggtcttggaccggtccggttcactagcttat 33884822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 18365889 - 18365979
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  18365889 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 18365979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 18380928 - 18381018
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  18380928 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 18381018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 34611180 - 34611090
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  34611180 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 34611090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 34626297 - 34626207
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  34626297 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 34626207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 40463991 - 40464081
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  40463991 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 40464081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 40478882 - 40478972
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  40478882 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 40478972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 2505906 - 2505785
Alignment:
Q  157 tgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatgga-ttttctaggaaatttatcaagatttttaatcaaaacattggttcaaata 255  Q
    |||||||||  ||||||||||  ||||||||||||||||  | | ||| | ||||||||||| |||||| | | |||||||||| |||||||||||||||    
T  2505906 tgcaaaaatgtcataaaaacactaagaaaatatcaagaaacatgtatgaatttttctaggaattttatc-acaattttaatcaagacattggttcaaata 2505808  T
Q  256 gcaaagagaaacagtgcaaatag 278  Q
    ||||||| |||| ||||||||||    
T  2505807 gcaaagaaaaacggtgcaaatag 2505785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 2521226 - 2521105
Alignment:
Q  157 tgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatgga-ttttctaggaaatttatcaagatttttaatcaaaacattggttcaaata 255  Q
    |||||||||  ||||||||||  ||||||||||||||||  | | ||| | ||||||||||| |||||| | | |||||||||| |||||||||||||||    
T  2521226 tgcaaaaatgtcataaaaacactaagaaaatatcaagaaacatgtatgaatttttctaggaattttatc-acaattttaatcaagacattggttcaaata 2521128  T
Q  256 gcaaagagaaacagtgcaaatag 278  Q
    ||||||| |||| ||||||||||    
T  2521127 gcaaagaaaaacggtgcaaatag 2521105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 13314841 - 13314914
Alignment:
Q  207 ttttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaa 281  Q
    ||||||||||| |||||||  ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||    
T  13314841 ttttctaggaattttatcacaatttt-aatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagcaa 13314914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 281
Target Start/End: Original strand, 13330168 - 13330241
Alignment:
Q  207 ttttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaa 281  Q
    ||||||||||| |||||||  ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||    
T  13330168 ttttctaggaattttatcacaatttt-aatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagcaa 13330241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 31426238 - 31426165
Alignment:
Q  207 ttttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaa 281  Q
    ||||||||||| |||||||  ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||    
T  31426238 ttttctaggaattttatcacaatttt-aatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagcaa 31426165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 31441576 - 31441503
Alignment:
Q  207 ttttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaa 281  Q
    ||||||||||| |||||||  ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||    
T  31441576 ttttctaggaattttatcacaatttt-aatcaagacattggttcaaatagcaaagaaaaacagtgcaaatagcaa 31441503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 359 - 423
Target Start/End: Complemental strand, 37211033 - 37210970
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccg 423  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||    
T  37211033 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccg 37210970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 477
Target Start/End: Complemental strand, 16681785 - 16681688
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaacggaaggagctccggtttttt 477  Q
    ||||||||||||| ||||||||||||| || ||||| |||||||| || ||||||||||||||| |||||||||| || |||  |||| ||||||||||    
T  16681785 gaaaccctagatccaacggccaggaatgaa-ggggattggaccggtcttggaccggtccggttcactggcttatataaaggattgagcaccggtttttt 16681688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 456
Target Start/End: Complemental strand, 21664159 - 21664084
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||| ||||||||||||| || ||||| |||||||| || ||||||||||||||| ||||| |||||||    
T  21664159 aaaccctagatccaacggccaggaatgaa-ggggattggaccggtcttggaccggtccggttcactggcctataaaa 21664084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 3943029 - 3942956
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| | |||| ||||||||||| ||||||||||    
T  3943029 gaaaccctagatccaacggccaggaa-cgaaggggattggaccggtcttggatcggtccggttcactggcttata 3942956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 18062561 - 18062634
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttata 453  Q
    |||||||| |||| |||||||||||| ||||||||| |||||||| || ||| ||||||||||| ||||||||||    
T  18062561 gaaaccctcgatccaacggccaggaa-caaaggggattggaccggtcttggatcggtccggttcactggcttata 18062634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 29972586 - 29972632
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||    
T  29972586 gattgatccagggtcctgaaaccctagatcaaacggcctggaatcaa 29972632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 30024057 - 30024011
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||    
T  30024057 gattgatccagggtcctgaaaccctagatcaaacggcctggaatcaa 30024011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 409
Target Start/End: Complemental strand, 30039321 - 30039275
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||| | ||||||||||||||||||||||| ||||||||    
T  30039321 gattgatccagggtcctgaaaccctagatcaaacggcctggaatcaa 30039275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 483
Target Start/End: Original strand, 37295624 - 37295726
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacggaaggagctccggttttttcc 479  Q
    ||||||||||||||||||||||||||  ||||| | |||||||| | || ||||||||||||| ||||| |||| ||||   ||||| ||||||| || |    
T  37295624 aaaccctagatcaaacggccaggaat-gaagggaattggaccggtcttgaaccggtccggttcactggcctatataacgaggggagcaccggtttatttc 37295722  T
Q  480 attt 483  Q
    ||||    
T  37295723 attt 37295726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 453
Target Start/End: Complemental strand, 21500477 - 21500405
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttata 453  Q
    ||||||||||||||||||||||| ||  ||||| ||||||||||   |||||||||||||||| ||||| ||||    
T  21500477 aaaccctagatcaaacggccagg-attgaagggaaatggaccggttttggaccggtccggttcactggcctata 21500405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 456
Target Start/End: Original strand, 12479 - 12913
Alignment:
Q  18 acattaacatatcaaatggccttt-atcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaat 116  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||||||||| |||||||        ||||||||||||||||||| ||||||||||||||    
T  12479 acattaacatgtcaaatggccttttatcacatatccacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaagaattaaaat 12575  T
Q  117 gccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctagga 216  Q
    ||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  12576 gccatggattaatcatacaagaattttgccaattccaacgtgcaaaaataccataaaa-catcaagaaaatgtcaagaagtaagcatggattttctagga 12674  T
Q  217 aatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggccc 316  Q
    |||||||||| ||||||||||||  ||||||||||||||||||| | |||||||||||||||| ||| || | ||| ||||| | || | | ||| ||||    
T  12675 aatttatcaaaatttttaatcaaggcattggttcaaatagcaaaaacaaacagtgcaaatagc-agaaaataagcaaaaacgtagaaaagaactaagccc 12773  T
Q  317 aaaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaa 416  Q
    |||||||| |||||| | | ||     | | | |||||  | ||||||||||||||||||||  |||||||||||||||||||||||||||||||| | |    
T  12774 aaaccaaagcccaaaactacaaggtccggatgcacaggagccacacgattgatccaggattcaaaaaccctagatcaaacggccaggaatcaaaggagga 12873  T
Q  417 tggaccggactggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  12874 tggaccggactggaccggtccggttcgctggcctataaaa 12913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 213; Significance: 1e-116; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 18 - 283
Target Start/End: Original strand, 34183127 - 34183391
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaa-taatccaggaaagaattaaaat 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||| ||||||||||||||    
T  34183127 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacaaaaaa-caatcataagaaaataatccaagaaagaattaaaat 34183225  T
Q  117 gccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctagga 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  34183226 gccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaa-catcaagaaaatatcaagaagtaagcatggattttctagga 34183324  T
Q  217 aatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaaga 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  34183325 aatttatcaagatttttaatcaaaacattggttcaaatagcaaagaagaacagtgcaaatagcaaga 34183391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 37941772 - 37942032
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||| |||||    
T  37941772 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacaaaaaa-caatcataagaaataatccaagaaagaatttaaatg 37941870  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  37941871 ccatggattaatcatacaagaattttgccaattccaacatgcaaaaataccataaaa-catcaagaaaatatcaagaagtaagcatggattttctaggaa 37941969  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||    
T  37941970 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagatagggtgcaaatagca 37942032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 18 - 262
Target Start/End: Original strand, 31472365 - 31472605
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||       |||||||||||||||||||| |||||||||||||||    
T  31472365 acattaacatatcaaatggcctttatcacatgttcacaaatcaatgatagaattgacaaaa---caatcataagaaataatccaagaaagaattaaaatg 31472461  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  31472462 ccatggattaatcatacaagaattttgccaattccaatgtgcaaaaataccataaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaa 31472560  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaaga 262  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  31472561 atttatcaagatttttaatcaaaacattggttcaaatagcaaaga 31472605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 19 - 278
Target Start/End: Original strand, 12706478 - 12706733
Alignment:
Q  19 cattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatgc 118  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||        ||||||||||||||||||| |||| |||||||||||    
T  12706478 cattaacatgtcaaatggcatttatcacgtattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatgc 12706574  T
Q  119 catggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaaa 218  Q
    |||||||||||||||||| |||||||||||| |||   |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  12706575 catggattaatcatacaaaaattttgccaattccagcgtgcaaaaataccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaaa 12706673  T
Q  219 tttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatag 278  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  12706674 tttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatag 12706733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 19 - 278
Target Start/End: Original strand, 12721878 - 12722133
Alignment:
Q  19 cattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatgc 118  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||        ||||||||||||||||||| |||| |||||||||||    
T  12721878 cattaacatgtcaaatggcatttatcacgtattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatgc 12721974  T
Q  119 catggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaaa 218  Q
    |||||||||||||||||| |||||||||||| |||   |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  12721975 catggattaatcatacaaaaattttgccaattccagcgtgcaaaaataccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaaa 12722073  T
Q  219 tttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatag 278  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  12722074 tttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatag 12722133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 359 - 495
Target Start/End: Original strand, 250846 - 250981
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacg 458  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| || |    
T  250846 acacgattgatccagggtcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggattggaccggtccggttcgctggc-tatataagg 250944  T
Q  459 gaaggagctccggttttttccattttccactttcctt 495  Q
    ||||||||||||||||| |||||||||||||||||||    
T  250945 gaaggagctccggttttctccattttccactttcctt 250981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 359 - 495
Target Start/End: Original strand, 266376 - 266511
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacg 458  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| || |    
T  266376 acacgattgatccagggtcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggattggaccggtccggttcgctggc-tatataagg 266474  T
Q  459 gaaggagctccggttttttccattttccactttcctt 495  Q
    ||||||||||||||||| |||||||||||||||||||    
T  266475 gaaggagctccggttttctccattttccactttcctt 266511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 350 - 474
Target Start/End: Complemental strand, 37369796 - 37369672
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 449  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37369796 acaggaaccacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 37369697  T
Q  450 tataaaacggaaggagctccggttt 474  Q
    |||||||  |||||||| |||||||    
T  37369696 tataaaagtgaaggagcaccggttt 37369672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 350 - 474
Target Start/End: Complemental strand, 37387630 - 37387506
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 449  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37387630 acaggaaccacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 37387531  T
Q  450 tataaaacggaaggagctccggttt 474  Q
    |||||||  |||||||| |||||||    
T  37387530 tataaaagtgaaggagcaccggttt 37387506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 361 - 487
Target Start/End: Original strand, 16962520 - 16962645
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacgga 460  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  16962520 acgattgatcaaggatcctgaaaccctagatcaaacggccaggaatcaaaggagaatggaccggactggaccggtccggttcgctggcttataaaaggga 16962619  T
Q  461 aggagctccggttttttccattttcca 487  Q
    ||||||||||||||||| |||||||||    
T  16962620 aggagctccggtttttt-cattttcca 16962645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 363 - 474
Target Start/End: Original strand, 22918506 - 22918617
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacggaag 462  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  22918506 gattgatccagggttctgaaaccctagatcaaacggccaggaatcgaaggggaatggaccggactggaccggtccggttcgctggcttataaaaagggag 22918605  T
Q  463 gagctccggttt 474  Q
    ||||||||||||    
T  22918606 gagctccggttt 22918617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 363 - 474
Target Start/End: Original strand, 22931616 - 22931727
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacggaag 462  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  22931616 gattgatccagggttctgaaaccctagatcaaacggccaggaatcgaaggggaatggaccggactggaccggtccggttcgctggcttataaaaagggag 22931715  T
Q  463 gagctccggttt 474  Q
    ||||||||||||    
T  22931716 gagctccggttt 22931727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 359 - 453
Target Start/End: Complemental strand, 31870918 - 31870824
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttata 453  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  31870918 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggattgaaccggtccggttcgctggcttata 31870824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 359 - 453
Target Start/End: Complemental strand, 31886111 - 31886017
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttata 453  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  31886111 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggattgaaccggtccggttcgctggcttata 31886017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 381 - 495
Target Start/End: Complemental strand, 5800336 - 5800223
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacggaaggagctccggttttttcca 480  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||| || |||| ||||||||||||||||||    
T  5800336 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggattgaaccggtccggttcgctggc-tatataagggaaagagctccggttttttcca 5800238  T
Q  481 ttttccactttcctt 495  Q
    |||| ||||||||||    
T  5800237 tttttcactttcctt 5800223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 359 - 453
Target Start/End: Original strand, 31472704 - 31472798
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttata 453  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  31472704 acacgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggattgaaccggtccggttcgctggcttata 31472798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 359 - 453
Target Start/End: Original strand, 34183468 - 34183562
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttata 453  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  34183468 acacgattgatccaggatcctaaaaccctagatcaaacggccaggaatcaaaggagaatggaccggattggaccggtccggttcgctggcttata 34183562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 19406835 - 19406932
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  19406835 acacgattgatccaggattcaaaaaccctagatcaaacggccaggaatcaaaggaggatggaccggactggaccggtccggttcgctggcctataaaa 19406932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 19421835 - 19421932
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  19421835 acacgattgatccaggattcaaaaaccctagatcaaacggccaggaatcaaaggaggatggaccggactggaccggtccggttcgctggcctataaaa 19421932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 449
Target Start/End: Complemental strand, 16160477 - 16160377
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggc 448  Q
    ||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  16160477 acaggaaccacacgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggc 16160378  T
Q  449 t 449  Q
    |    
T  16160377 t 16160377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 449
Target Start/End: Complemental strand, 16171378 - 16171278
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggc 448  Q
    ||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  16171378 acaggaaccacacgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggc 16171279  T
Q  449 t 449  Q
    |    
T  16171278 t 16171278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 27813582 - 27813491
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  27813582 acacgattgatccaggatcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggct 27813491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 320 - 449
Target Start/End: Complemental strand, 19552351 - 19552222
Alignment:
Q  320 ccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatgg 419  Q
    ||||| |||||||||||||| |||| |||||||| ||| |||||||||||||||| | |||||||||||| ||||||||||||||| ||||||||| |||    
T  19552351 ccaaagcccaaagccaaaacgcagggaagtacagagaccacacgattgatccagggtcctgaaaccctagttcaaacggccaggaa-caaaggggattgg 19552253  T
Q  420 accgg-actggaccggtccggttcgctggct 449  Q
    |||||  ||||||||||||||||| ||||||    
T  19552252 accggtcctggaccggtccggttcactggct 19552222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 361 - 495
Target Start/End: Original strand, 13926947 - 13927081
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacgg 459  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||| |||| |||||||| | ||||||||||||||||||||||||||||||       
T  13926947 acgattgatccaggattctaaaaccctagatcaaacggccaggaa-caaaagggattggaccggtcttggaccggtccggttcgctggcttataaaagca 13927045  T
Q  460 aaggagctccggttttttccattttccactttcctt 495  Q
    |  ||||||||||||||||  ||||| |||| ||||    
T  13927046 acagagctccggttttttcatttttctacttccctt 13927081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 361 - 495
Target Start/End: Original strand, 13942143 - 13942277
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacgg 459  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||| |||| |||||||| | ||||||||||||||||||||||||||||||       
T  13942143 acgattgatccaggattctaaaaccctagatcaaacggccaggaa-caaaagggattggaccggtcttggaccggtccggttcgctggcttataaaagca 13942241  T
Q  460 aaggagctccggttttttccattttccactttcctt 495  Q
    |  ||||||||||||||||  ||||| |||| ||||    
T  13942242 acagagctccggttttttcatttttctacttccctt 13942277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 359 - 449
Target Start/End: Complemental strand, 27798493 - 27798402
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  27798493 acacgattgatccaggatcctgaaaccctagaccaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggct 27798402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 359 - 453
Target Start/End: Original strand, 34801326 - 34801421
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttata 453  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| ||||    
T  34801326 acacgattgatccaggatcttgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggcctata 34801421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 107 - 456
Target Start/End: Complemental strand, 28275060 - 28274713
Alignment:
Q  107 gaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaa-taccataaaaacatcaagaaaatatcaagaagtaagcatgg 205  Q
    |||||||| ||| ||||||||||||| ||| | ||||  ||| | ||  ||||||||| |  ||||||||||||||||||| ||||| ||| |||||||     
T  28275060 gaattaaagtgctatggattaatcatgcaatatttttatcaagctcaccatgcaaaaaatgtcataaaaacatcaagaaaacatcaaaaagcaagcatga 28274961  T
Q  206 attttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaaga 305  Q
    ||||||||| || ||||||||||||||| ||| ||||| ||||||||||||| |||| |||  |||  |||||||||  |||| ||| ||||||| || |    
T  28274960 attttctagaaattttatcaagatttttgatc-aaacactggttcaaatagc-aagaaaaatggtgtgaatagcaag--aagaagcaaaaacgcagaaaa 28274865  T
Q  306 aacctaggcccaaaccaa-aacccaaagcca-aaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccagg 403  Q
    || | | ||||||||||| | |||||| ||| ||| |   | | | ||||| || ||| ||||||||||||    | |||||||||||| ||||||||||    
T  28274864 aagcaaagcccaaaccaacagcccaaaaccagaaagatccggacgcacaggaaccacaggattgatccagg-ggatcaaaccctagatccaacggccagg 28274766  T
Q  404 aatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    || | ||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  28274765 aa-cgaaggggactggaccggtcttggaccggtccggttcgctggcttataaaa 28274713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 85 - 281
Target Start/End: Original strand, 40194717 - 40194911
Alignment:
Q  85 tcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaa 184  Q
    |||||||||||||||||  ||||||||||||||| ||| || |||| ||||||| ||||  ||| | ||||||||| ||||  |||||||||||||||||    
T  40194717 tcataagaaataatccaaaaaagaattaaaatgctatgaatcaatcgtacaaga-ttttatcaacctcaatatgcagaaatgtcataaaaacatcaagaa 40194815  T
Q  185 aatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaa 281  Q
    || ||||| ||| ||||||| ||| | ||| || |||||||| |||||  ||||||  | ||||||||||||| |||| |||| |||||||||||||    
T  40194816 aacatcaaaaagcaagcatgaattctttagaaattttatcaaaattttcgatcaaagtactggttcaaatagc-aagaaaaacggtgcaaatagcaa 40194911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 359 - 425
Target Start/End: Complemental strand, 27214060 - 27213995
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgga 425  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||||    
T  27214060 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccgga 27213995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 12581474 - 12581430
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaa 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12581474 acgattgatccaggattctgaaaccctagatcaaacggccaggaa 12581430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 12595466 - 12595422
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaa 405  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  12595466 acgattgatccaggattctgaaaccctagatcaaacggccaggaa 12595422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 9355591 - 9355681
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  9355591 acacgattgatctaggattctgaaaccctagatcaaacggccaagaa-caagggggactggaccggaaataaaccggtccggttcactggct 9355681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 381 - 485
Target Start/End: Complemental strand, 17259431 - 17259327
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaacggaaggagctccggttttttcc 479  Q
    |||||||||||| ||||||||||||| || ||||| |||||||| || ||||||||||||||| ||||||||||||| || | | || ||||||| || |    
T  17259431 aaaccctagatccaacggccaggaatgaa-ggggattggaccggtcttggaccggtccggttcactggcttataaaaggggaagcgcgccggtttatttc 17259333  T
Q  480 attttc 485  Q
    ||||||    
T  17259332 attttc 17259327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 475
Target Start/End: Complemental strand, 28876766 - 28876671
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaacggaaggagctccggtttt 475  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| || ||||||||||||||| |||||||||| || ||| ||| | ||||||||    
T  28876766 gaaaccctagatccaacggccaggaa-cgaaggggattggaccggtcttggaccggtccggttcactggcttatataaaggatggaacaccggtttt 28876671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 475
Target Start/End: Complemental strand, 28891976 - 28891881
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaacggaaggagctccggtttt 475  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| || ||||||||||||||| |||||||||| || ||| ||| | ||||||||    
T  28891976 gaaaccctagatccaacggccaggaa-cgaaggggattggaccggtcttggaccggtccggttcactggcttatataaaggatggaacaccggtttt 28891881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 478
Target Start/End: Original strand, 18139807 - 18139905
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    ||||||| ||||| |||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||| ||    |||||| |||||||||||    
T  18139807 gaaacccaagatccaacggccaggaa-caaaggggattggaccggtcttggaccggtccggttcactggcttatataagcataggagcaccggttttttc 18139905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 28270422 - 28270495
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||||  ||||||| |||||||| | |||||||||||||||| ||||||||||    
T  28270422 gaaaccctagatccaacggccaggaat-gaaggggattggaccggtcttggaccggtccggttcactggcttata 28270495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 37676224 - 37676270
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  37676224 gattgatccaggatcctgaaaccctagatcaaacggcctggaatcaa 37676270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 37691488 - 37691534
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  37691488 gattgatccaggatcctgaaaccctagatcaaacggcctggaatcaa 37691534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 37706753 - 37706799
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  37706753 gattgatccaggatcctgaaaccctagatcaaacggcctggaatcaa 37706799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 37871314 - 37871387
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||||  ||||||| |||||||| | |||||||||||||||| ||||||||||    
T  37871314 gaaaccctagatccaacggccaggaat-gaaggggattggaccggtcttggaccggtccggttcactggcttata 37871387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 456
Target Start/End: Complemental strand, 20830673 - 20830597
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||| ||||||||||||  |||||| | |||||||| || ||||||||||||||| |||||||||||||    
T  20830673 gaaaccctagatccaacggccaggaacgaaaggg-attggaccggtcttggaccggtccggttcactggcttataaaa 20830597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 456
Target Start/End: Original strand, 19447093 - 19447168
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||||||||||||||||  ||||| | |||||||| | |||||||||||||||| ||||| |||||||    
T  19447093 aaaccctagatcaaacggccaggaat-gaagggaattggaccggtcttggaccggtccggttcactggcctataaaa 19447168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 456
Target Start/End: Original strand, 19461903 - 19461978
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||||||||||||||||  ||||| | |||||||| | |||||||||||||||| ||||| |||||||    
T  19461903 aaaccctagatcaaacggccaggaat-gaagggaattggaccggtcttggaccggtccggttcactggcctataaaa 19461978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 32237489 - 32237562
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||||  ||||||| |||||||| | |||||||||||||||| ||||| ||||    
T  32237489 gaaaccctagatccaacggccaggaat-gaaggggattggaccggtcttggaccggtccggttcactggcctata 32237562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 27115426 - 27115357
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || ||||||||  ||||||||||||||||| ||||||    
T  27115426 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcctggaccggtccggttcactggct 27115357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 27126391 - 27126322
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || ||||||||  ||||||||||||||||| ||||||    
T  27126391 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcctggaccggtccggttcactggct 27126322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 453
Target Start/End: Original strand, 19560606 - 19560678
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||||||||||||| ||  ||||| |||||||||| | ||||| |||||||||| ||||| ||||    
T  19560606 aaaccctagatcaaacggccagg-attgaagggaaatggaccggtcttggactggtccggttcactggcctata 19560678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1629 (Bit Score: 201; Significance: 1e-109; HSPs: 1)
Name: scaffold1629
Description:

Target: scaffold1629; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 18 - 331
Target Start/End: Original strand, 26 - 338
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||    
T  26 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacaaaaaa-caatcataagaaataatccaagaaagaattaaaatg 124  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  125 ccatggattaatcatacaagaattttgccaattccaacatacaaaaataccataaaa-catcaagaaaatatcaagaagtaagcatggattttctaggaa 223  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaaga-aacctaggccc 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  || ||||||||| || || ||||| |||||   |||| |||  ||||||    
T  224 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagatagggtacaaatagcaggaaaataggcaaaaacgtgaaagagaactcaggccc 323  T
Q  317 aaaccaaaacccaaa 331  Q
    ||| |||||||||||    
T  324 aaaacaaaacccaaa 338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 191; Significance: 1e-103; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 18 - 453
Target Start/End: Complemental strand, 47201931 - 47201501
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||        ||||||||||||||||||| |||| ||||||||||    
T  47201931 acattaacatgtcaaatggcatttatcacatattcacaaatcaatgatagaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatg 47201835  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||   |||||||| ||| ||||| |||||||||||| ||||| |||||||||||||||||||||||    
T  47201834 ccatggattaatcatacaagaattttgccaattccagcgtgcaaaaacaccgtaaaa-catcaagaaaatgtcaaggagtaagcatggattttctaggaa 47201736  T
Q  218 atttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagcaagacaagaggcagaaacgcacaagaaacctaggccca 317  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| || ||||||||||||||| | |||    | |||||   |||||| ||  |||||    
T  47201735 atttatcaagatttttaatcaaggcattggttcaaatagcaaagaaaagcagtgcaaatagcaaaaaaag-caaaaaaacgtgaaagaaaactgagccca 47201637  T
Q  318 aaccaaaacccaaagccaaaacacaggaaagtacagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaat 417  Q
    | ||||| |||||| | | ||     | | | |||||  | ||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||    
T  47201636 acccaaagcccaaaactacaaggtccggacgcacaggagccacacgattgatccaggatcataaaaccctagatcaaacggccaggaatcaaaggggaat 47201537  T
Q  418 ggaccggactggaccggtccggttcgctggcttata 453  Q
    |||||||| || ||||||||||||||||||||||||    
T  47201536 ggaccggattgaaccggtccggttcgctggcttata 47201501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 361 - 484
Target Start/End: Complemental strand, 14894345 - 14894222
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacgga 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  14894345 acgattgatccaggattctgaaaccctagatcaaacggccaggaaacgaaggggaatggaccggactggaccggtccggttcgctggcttataaaaagga 14894246  T
Q  461 aggagctccggttttttccatttt 484  Q
    |||||||||||||| |||||||||    
T  14894245 aggagctccggtttattccatttt 14894222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 362 - 456
Target Start/End: Original strand, 41783684 - 41783778
Alignment:
Q  362 cgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  41783684 cgattgatccaggattcaaaaaccctagatcaaacggccaggaatcaaaggaggatggaccggactggaccggtccggttcgctggcctataaaa 41783778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 362 - 456
Target Start/End: Original strand, 41798952 - 41799046
Alignment:
Q  362 cgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  41798952 cgattgatccaggattcaaaaaccctagatcaaacggccaggaatcaaaggaggatggaccggactggaccggtccggttcgctggcctataaaa 41799046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 361 - 495
Target Start/End: Original strand, 13767486 - 13767620
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacgg 459  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||| |||| |||||||| | ||||||||||||||||||||||||||||||       
T  13767486 acgattgatccaggattctaaaaccctagatcaaacggccaggaa-caaaagggattggaccggtcttggaccggtccggttcgctggcttataaaagca 13767584  T
Q  460 aaggagctccggttttttccattttccactttcctt 495  Q
    |  ||||||||||||||||  ||||| |||| ||||    
T  13767585 acagagctccggttttttcatttttctacttccctt 13767620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 85 - 259
Target Start/End: Complemental strand, 21505163 - 21504991
Alignment:
Q  85 tcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaa 184  Q
    ||||||| |||||||||  ||||||||||||||| ||| || |||||||||||| ||||  ||| | ||||||||||||||  |||||||||||||||||    
T  21505163 tcataaggaataatccaa-aaagaattaaaatgctatgaatcaatcatacaaga-ttttatcaacctcaatatgcaaaaatgtcataaaaacatcaagaa 21505066  T
Q  185 aatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaa 259  Q
    ||  |||| ||| ||||||| ||||| ||| || ||||||||||||||| || ||| || |||||||||||||||    
T  21505065 aacgtcaaaaagcaagcatgaattttttagaaattttatcaagatttttgattaaagcactggttcaaatagcaa 21504991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 361 - 424
Target Start/End: Original strand, 30727669 - 30727732
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30727669 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg 30727732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 361 - 456
Target Start/End: Complemental strand, 36507772 - 36507677
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| |||||||||||||    
T  36507772 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaaagggactggaccggtcttggaccggtccggttcactggcttataaaa 36507677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 361 - 456
Target Start/End: Complemental strand, 48094814 - 48094719
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| |||||||||||||    
T  48094814 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaaagggactggaccggtcttggaccggtccggttcactggcttataaaa 48094719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 16558679 - 16558769
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| | |||||| | |  ||||||||||||| ||||||    
T  16558679 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactagaccggaaataaaccggtccggttcactggct 16558769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 28579877 - 28579702
Alignment:
Q  106 agaattaaaatgccatggattaatcatacaagaattttgccaatcc-caatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatg 204  Q
    ||||||||||||| ||| ||||||||||| | |||||    ||||| |||| |||||||||  ||||||||||  ||||||||||||||||  | | |||    
T  28579877 agaattaaaatgctatgaattaatcataccaaaatttcatgaatcctcaatgtgcaaaaatgtcataaaaacaataagaaaatatcaagaaacatgtatg 28579778  T
Q  205 ga-ttttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
     | ||||||||||| |||||| | | |||||||||| |||| ||| ||  ||||||| | |||||||||||||||||    
T  28579777 aatttttctaggaattttatc-acaattttaatcaagacataggtgcaggtagcaaacaaaaacagtgcaaatagca 28579702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 280
Target Start/End: Complemental strand, 28595303 - 28595128
Alignment:
Q  106 agaattaaaatgccatggattaatcatacaagaattttgccaatcc-caatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatg 204  Q
    ||||||||||||| ||| ||||||||||| | |||||    ||||| |||| |||||||||  ||||||||||  ||||||||||||||||  | | |||    
T  28595303 agaattaaaatgctatgaattaatcataccaaaatttcatgaatcctcaatgtgcaaaaatgtcataaaaacaataagaaaatatcaagaaacatgtatg 28595204  T
Q  205 ga-ttttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
     | ||||||||||| |||||| | | |||||||||| |||| ||| ||  ||||||| | |||||||||||||||||    
T  28595203 aatttttctaggaattttatc-acaattttaatcaagacataggtgcaggtagcaaacaaaaacagtgcaaatagca 28595128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 18292691 - 18292618
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| || ||||||||||||||| ||||||||||    
T  18292691 gaaaccctagatccaacggccaggaa-cgaaggggattggaccggtcttggaccggtccggttcactggcttata 18292618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 21480668 - 21480595
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| || ||||||||||||||| ||||||||||    
T  21480668 gaaaccctagatccaacggccaggaa-cgaaggggattggaccggtcttggaccggtccggttcactggcttata 21480595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 46195753 - 46195808
Alignment:
Q  275 atagcaagacaagaggcagaaacgcacaagaaacctaggcccaaaccaaaacccaa 330  Q
    ||||||||| |||  ||||||||||||||||||||||||||||| ||||| |||||    
T  46195753 atagcaagaaaaggagcagaaacgcacaagaaacctaggcccaacccaaagcccaa 46195808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 18288313 - 18288240
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| | ||| |||||||||||| ||||||||||    
T  18288313 gaaaccctagatccaacggccaggaa-cgaaggggattggaccggtcttggtccggtccggttcactggcttata 18288240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 381 - 453
Target Start/End: Complemental strand, 15433470 - 15433398
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||||||||||||| ||  ||||| |||||||||| | |||||||||||||||| ||||| ||||    
T  15433470 aaaccctagatcaaacggccagg-attgaagggaaatggaccggtcttggaccggtccggttcactggcctata 15433398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 21887938 - 21888012
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg--actggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||||  ||||||| ||||||||    |||||||||||||||| ||||||||||    
T  21887938 gaaaccctagatccaacggccaggaat-gaaggggattggaccgggtcttggaccggtccggttcactggcttata 21888012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 357
Target Start/End: Complemental strand, 10935876 - 10935822
Alignment:
Q  304 gaaacctaggcccaaaccaaaa-cccaaagccaaaacacaggaaagtacagggac 357  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||  |||||||    
T  10935876 gaaacctaggcccaaacccaaagcccaaagtcaaaacacaggaaagcgcagggac 10935822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 357
Target Start/End: Complemental strand, 10955067 - 10955013
Alignment:
Q  304 gaaacctaggcccaaaccaaaa-cccaaagccaaaacacaggaaagtacagggac 357  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||  |||||||    
T  10955067 gaaacctaggcccaaacccaaagcccaaagtcaaaacacaggaaagcgcagggac 10955013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 456
Target Start/End: Original strand, 16198663 - 16198739
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||| |||||||||||||  ||||||| ||||||||   |||||||||||||||| || || |||||||    
T  16198663 gaaaccctagatccaacggccaggaat-gaaggggattggaccggttttggaccggtccggttcactagcctataaaa 16198739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 456
Target Start/End: Original strand, 16213685 - 16213761
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccg-gactggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||| |||||||||||||  ||||||| |||||||    |||||||||||||||| ||||| |||||||    
T  16213685 gaaaccctagatccaacggccaggaat-gaaggggattggaccgattttggaccggtccggttcactggcctataaaa 16213761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 174; Significance: 2e-93; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 18 - 280
Target Start/End: Original strand, 26309743 - 26310002
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatg 117  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||       |||||||||||||||||||| |||||||||||||||    
T  26309743 acattaacatatcaaatggcctttatcacattttcacaaatcaatgatagaattgacaaaa---caatcataagaaataatccaagaaagaattaaaatg 26309839  T
Q  118 ccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaa 217  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  26309840 ccatggattaatcatacaagaattttgccaattccagcgtgcaaaaatgccat-aaaacatcaagaaaatgtcaagaagtaagcatggattttctaggaa 26309938  T
Q  218 atttatcaagattttt-aatcaaaacattggttcaaatagcaaagagaaacagtgcaaatagca 280  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||| |||||||||||||||||    
T  26309939 atttatcaagatttttaaatcaagacataggttcaaatagcaaagaaaaacagtgcaaatagca 26310002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 19 - 278
Target Start/End: Complemental strand, 26523121 - 26522866
Alignment:
Q  19 cattaacatatcaaatggcctttatcacatattcacaaatcaatgataaaattgacnnnnnnncaatcataagaaataatccaggaaagaattaaaatgc 118  Q
    ||||||||| ||||||||| |||||||| ||||||||||||||||||  |||||||        ||||||||||||||||||| |||| |||||||||||    
T  26523121 cattaacatgtcaaatggcatttatcacgtattcacaaatcaatgatggaattgacaaaat---aatcataagaaataatccaagaaaaaattaaaatgc 26523025  T
Q  119 catggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctaggaaa 218  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  26523024 catggattaatcatacaagaattttgccaattccagcgtgcaaaaataccgtaaaa-catcaagaaaatgtcaagaagtaagcatggattttctaggaaa 26522926  T
Q  219 tttatcaagatttttaatcaaaacattggttcaaatagcaaagagaaacagtgcaaatag 278  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  26522925 tttatcaagatttttaatcaagacattggttcaaatagcaaagaaaaacagtgcaaatag 26522866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 350 - 484
Target Start/End: Original strand, 11027309 - 11027442
Alignment:
Q  350 acagggacaacacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggct 449  Q
    ||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  11027309 acaggaaccacacgattgatccaggattctggaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctagc- 11027407  T
Q  450 tataaaacggaaggagctccggttttttccatttt 484  Q
    ||||||| ||||||||||||||||| || ||||||    
T  11027408 tataaaaaggaaggagctccggtttatttcatttt 11027442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 361 - 474
Target Start/End: Original strand, 26660201 - 26660314
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacgga 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  26660201 acgattgatccaggattctgaaaccctagatcaaacggccaggaaacgaaggggaatggaccggactggaccggtccggttcgctggcttataaaaaggg 26660300  T
Q  461 aggagctccggttt 474  Q
    ||||||||||||||    
T  26660301 aggagctccggttt 26660314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 361 - 474
Target Start/End: Original strand, 26675394 - 26675507
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacgga 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  26675394 acgattgatccaggattctgaaaccctagatcaaacggccaggaaacgaaggggaatggaccggactggaccggtccggttcgctggcttataaaaaggg 26675493  T
Q  461 aggagctccggttt 474  Q
    ||||||||||||||    
T  26675494 aggagctccggttt 26675507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 361 - 474
Target Start/End: Original strand, 26685531 - 26685644
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacgga 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  26685531 acgattgatccaggattctgaaaccctagatcaaacggccaggaaacgaaggggaatggaccggactggaccggtccggttcgctggcttataaaaaggg 26685630  T
Q  461 aggagctccggttt 474  Q
    ||||||||||||||    
T  26685631 aggagctccggttt 26685644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 361 - 474
Target Start/End: Original strand, 26689071 - 26689184
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacgga 460  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||     
T  26689071 acgattgatccaggattctgaaaccctagatcaaacggccaggaaacgaaggggaatggaccggactggaccggtccggttcgctggcttataaaaaggg 26689170  T
Q  461 aggagctccggttt 474  Q
    ||||||||||||||    
T  26689171 aggagctccggttt 26689184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 359 - 495
Target Start/End: Complemental strand, 4274231 - 4274096
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacg 458  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||      
T  4274231 acacgattgatccaggattctaaaaccctagatcaaacggccaggaatcaaaggagaatggaccggactggaccggtccggttcgctggcctataaaagt 4274132  T
Q  459 gaaggagctccggttttttccattttccactttcctt 495  Q
    |||||||| |||||||||| ||||||| |||| ||||    
T  4274131 gaaggagcaccggtttttt-cattttctacttccctt 4274096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 32998750 - 32998847
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||||    
T  32998750 acacgattgatccaggattcaaaaaccctagatcaaacggccaggaatcaaaggaggatggaccggactggaccggtccggttcgctggcctataaaa 32998847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 361 - 489
Target Start/End: Original strand, 26498381 - 26498509
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacgg 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| |||||||||||||  |    
T  26498381 acgattgatccaggattctgaaaccctagatcaaacggccaggaa-caaaagggactggaccggtcttggaccggtccggttcactggcttataaaagtg 26498479  T
Q  460 aaggagctccggttttttccattttccact 489  Q
    ||||| | |||||||| | |||||| ||||    
T  26498480 aaggaacaccggttttcttcatttttcact 26498509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 361 - 489
Target Start/End: Complemental strand, 26599648 - 26599520
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacgg 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| |||||||||||||  |    
T  26599648 acgattgatccaggattctgaaaccctagatcaaacggccaggaa-caaaagggactggaccggtcttggaccggtccggttcactggcttataaaagtg 26599550  T
Q  460 aaggagctccggttttttccattttccact 489  Q
    ||||| | |||||||| | |||||| ||||    
T  26599549 aaggaacaccggttttcttcatttttcact 26599520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 359 - 489
Target Start/End: Complemental strand, 2771174 - 2771054
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacg 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |          ||||||||||||||||||||||||||||||      
T  2771174 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaagaggga----------tggaccggtccggttcgctggcttataaaagt 2771085  T
Q  459 gaaggagctccggttttttccattttccact 489  Q
    ||| |||| ||||||| || |||||||||||    
T  2771084 gaaagagcaccggtttatttcattttccact 2771054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 359 - 489
Target Start/End: Complemental strand, 2783229 - 2783109
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacg 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |          ||||||||||||||||||||||||||||||      
T  2783229 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaagaggga----------tggaccggtccggttcgctggcttataaaagt 2783140  T
Q  459 gaaggagctccggttttttccattttccact 489  Q
    ||| |||| ||||||| || |||||||||||    
T  2783139 gaaagagcaccggtttatttcattttccact 2783109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 361 - 456
Target Start/End: Complemental strand, 21541649 - 21541555
Alignment:
Q  361 acgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| |||| |||||||| | |||||||||||||||| |||||||||||||    
T  21541649 acgattgatccagggttctgaaaccctagatcaaacggccaggaa-caaa-gggactggaccggtcttggaccggtccggttcactggcttataaaa 21541555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 359 - 489
Target Start/End: Complemental strand, 26696719 - 26696590
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttataaaac 457  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||| |||| ||     
T  26696719 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggc-tatataag 26696622  T
Q  458 ggaaggagctccggttttttccattttccact 489  Q
    |||||| | ||||||||| | |||||| ||||    
T  26696621 ggaaggggttccggttttcttcatttttcact 26696590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 26265149 - 26265239
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  26265149 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 26265239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 26325181 - 26325271
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  26325181 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 26325271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 31081206 - 31081296
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  31081206 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 31081296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 31093135 - 31093225
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  31093135 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 31093225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 363 - 452
Target Start/End: Original strand, 36880123 - 36880212
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttat 452  Q
    |||||||||||  || |||||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||  ||||||||    
T  36880123 gattgatccagagttatgaaaccctagatcaaacggccaggaatcaaa-gggattggaccggttctggaccggtccggttccttggcttat 36880212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 380 - 478
Target Start/End: Original strand, 16499569 - 16499667
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| || ||||||||||||||| |||||||||| || |||  |||| |||||||||||    
T  16499569 gaaaccctagatccaacggccaggaa-cgaaggggattggaccggtcttggaccggtccggttcactggcttatataaaggattgagcaccggttttttc 16499667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 380 - 478
Target Start/End: Original strand, 16508864 - 16508962
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| || ||||||||||||||| |||||||||| || |||  |||| |||||||||||    
T  16508864 gaaaccctagatccaacggccaggaa-cgaaggggattggaccggtcttggaccggtccggttcactggcttatataaaggattgagcaccggttttttc 16508962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 380 - 478
Target Start/End: Original strand, 16523980 - 16524078
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| || ||||||||||||||| |||||||||| || |||  |||| |||||||||||    
T  16523980 gaaaccctagatccaacggccaggaa-cgaaggggattggaccggtcttggaccggtccggttcactggcttatataaaggattgagcaccggttttttc 16524078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 24892445 - 24892535
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| | |||||| | |  ||||||||||||| ||||||    
T  24892445 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactagaccggaaataaaccggtccggttcactggct 24892535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 456
Target Start/End: Original strand, 10922441 - 10922517
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||| |||||||||||| | ||||||| |||||||| || ||||||||||||||| |||||||||||||    
T  10922441 gaaaccctagatccaacggccaggaa-cgaaggggattggaccggtcttggaccggtccggttcactggcttataaaa 10922517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 1591828 - 1591874
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  1591828 gattgatccaggatcctgaaaccctagatcaaacggcctggaatcaa 1591874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 18622273 - 18622200
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| ||||||||||||| || ||||| |||||||| || ||||||||||||||| ||||||||||    
T  18622273 gaaaccctagatccaacggccaggaatgaa-ggggattggaccggtcttggaccggtccggttcactggcttata 18622200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 15919590 - 15919663
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||||  ||||||| |||||||| | |||||||||||||||| ||||| ||||    
T  15919590 gaaaccctagatccaacggccaggaat-gaaggggattggaccggtcttggaccggtccggttcactggcctata 15919663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 456
Target Start/End: Complemental strand, 10851121 - 10851046
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaa 456  Q
    ||||||||||||||||||||| |||| || ||| | |||||||| || ||| ||||||||||||||||| |||||||    
T  10851121 aaaccctagatcaaacggccaagaatgaa-gggaattggaccggtcttggatcggtccggttcgctggcctataaaa 10851046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 280
Target Start/End: Original strand, 31554671 - 31554794
Alignment:
Q  157 tgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatgga-ttttctaggaaatttatcaagatttttaatcaaaacattggttcaaata 255  Q
    |||||||||  ||||||||||  ||||||||||||||||  | | ||| | ||||||||||| |||||| | |  ||||||||| |||| ||| ||  ||    
T  31554671 tgcaaaaatgtcataaaaacactaagaaaatatcaagaaacatgtatgaatttttctaggaattttatc-acaactttaatcaagacataggtgcaggta 31554769  T
Q  256 gcaaagagaaacagtgcaaatagca 280  Q
    ||||||| |||||||||||||||||    
T  31554770 gcaaagaaaaacagtgcaaatagca 31554794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 280
Target Start/End: Original strand, 31569660 - 31569783
Alignment:
Q  157 tgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatgga-ttttctaggaaatttatcaagatttttaatcaaaacattggttcaaata 255  Q
    |||||||||  ||||||||||  ||||||||||||||||  | | ||| | ||||||||||| |||||| | |  ||||||||| |||| ||| ||  ||    
T  31569660 tgcaaaaatgtcataaaaacactaagaaaatatcaagaaacatgtatgaatttttctaggaattttatc-acaactttaatcaagacataggtgcaggta 31569758  T
Q  256 gcaaagagaaacagtgcaaatagca 280  Q
    ||||||| |||||||||||||||||    
T  31569759 gcaaagaaaaacagtgcaaatagca 31569783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 385 - 455
Target Start/End: Original strand, 13896083 - 13896153
Alignment:
Q  385 cctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaa 455  Q
    ||||||||||||||||||||||  |||| || |||||||| | |||||||||||||||| ||||| ||||||    
T  13896083 cctagatcaaacggccaggaat-gaaggtgattggaccggtcttggaccggtccggttcactggcctataaa 13896153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 21997285 - 21997216
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || ||||||||  ||||||||||||||||| ||||||    
T  21997285 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcctggaccggtccggttcactggct 21997216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 442
Target Start/End: Complemental strand, 34193773 - 34193710
Alignment:
Q  379 tgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttc 442  Q
    |||||||||||||| |||||||| | ||||| ||  |||||||||||| ||||||||||||||||    
T  34193773 tgaaaccctagatctaacggccaag-atcaagggaaaatggaccggacttggaccggtccggttc 34193710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 442
Target Start/End: Original strand, 34196946 - 34197009
Alignment:
Q  379 tgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttc 442  Q
    |||||||||||||| |||||||| | ||||| ||  |||||||||||| ||||||||||||||||    
T  34196946 tgaaaccctagatctaacggccaag-atcaagggaaaatggaccggacttggaccggtccggttc 34197009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1179 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold1179
Description:

Target: scaffold1179; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 359 - 495
Target Start/End: Original strand, 965 - 1102
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttataaaacg 458  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| || | || |    
T  965 acacgattgatccagggtcctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggattggaccggtccggttcactggc-tacataagg 1063  T
Q  459 gaaggagctccgg--ttttttccattttccactttcctt 495  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  1064 gaaggagctccggttttttttccattttccactttcctt 1102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 75; Significance: 3e-34; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 85 - 259
Target Start/End: Original strand, 113550 - 113721
Alignment:
Q  85 tcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaa 184  Q
    |||||||||||||||||  ||||||||||||||| ||| || |||||||||||| ||||  ||| | ||||||||||||||  |||||||||||||||||    
T  113550 tcataagaaataatccaa-aaagaattaaaatgctatgaatcaatcatacaaga-ttttatcaacctcaatatgcaaaaatgtcataaaaacatcaagaa 113647  T
Q  185 aatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagcaa 259  Q
    || ||||| ||| ||||||| ||||| ||| || ||||||||||||||| ||| ||||| |||||||||||||||    
T  113648 aacatcaaaaagcaagcatgaattttatagaaattttatcaagatttttgatc-aaacactggttcaaatagcaa 113721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 363 - 483
Target Start/End: Original strand, 113825 - 113944
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggctta--taaaacgga 460  Q
    ||||||||||| |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||| | |    
T  113825 gattgatccagaaccctgaaaccctagatcaaacggccaggaa-caaaggggaatggaccggactggaccggtccggttcactggcttatttaaaaggca 113923  T
Q  461 aggagctccggttttttccattt 483  Q
    ||  |||||||||||||||||||    
T  113924 ag--gctccggttttttccattt 113944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 359 - 453
Target Start/End: Original strand, 28102 - 28197
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggcttata 453  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| ||||    
T  28102 acacgattgatccaggatcttgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggttctggaccggtccggttcactggcctata 28197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 18 - 257
Target Start/End: Complemental strand, 31593 - 31355
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaatgataaa-at-tgacnnnnnnncaatcataagaaataatccaggaaagaattaaaa 115  Q
    |||||||||||||||||||||||  |||||||| |||||||||| || ||| || ||||        | |||||||||| ||||||  ||||||||||||    
T  31593 acattaacatatcaaatggccttattcacatatccacaaatcaaggacaaagatatgacaaaaaa--attcataagaaaaaatcca-aaaagaattaaaa 31497  T
Q  116 tgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaaaatatcaagaagtaagcatggattttctagg 215  Q
     || ||| ||||||||| ||||| ||||  ||| | ||||||||||||||  | |||||| |||||||||| ||||| ||| ||||||| |||||||||     
T  31496 cgctatgaattaatcatgcaagatttttatcaacctcaatatgcaaaaatgtcgtaaaaatatcaagaaaacatcaaaaagcaagcatgaattttctaga 31397  T
Q  216 aaatttatcaagatttttaatcaaaacattggttcaaatagc 257  Q
    |  |||||||||| |||| |||||| || |||||||||||||    
T  31396 agttttatcaagagttttgatcaaagcactggttcaaatagc 31355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 31249 - 31161
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttat 452  Q
    ||||||||| | || || ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||    
T  31249 gattgatccggaatcctaaaaccctagatcaaacggccaggga-caaaggggaatggaccggactggaccggtccggttcactggcttat 31161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 61; Significance: 6e-26; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 85 - 257
Target Start/End: Original strand, 5546 - 5717
Alignment:
Q  85 tcataagaaataatccaggaaagaattaaaatgccatggattaatcatacaagaattttgccaatcccaatatgcaaaaataccataaaaacatcaagaa 184  Q
    |||||||||| ||||||  |||||||||||| || ||| ||||||||| ||||| ||||  ||| | ||||||||||||||  | |||||| ||||||||    
T  5546 tcataagaaaaaatccaa-aaagaattaaaacgctatgaattaatcatgcaagatttttatcaacctcaatatgcaaaaatgtcgtaaaaatatcaagaa 5644  T
Q  185 aatatcaagaagtaagcatggattttctaggaaatttatcaagatttttaatcaaaacattggttcaaatagc 257  Q
    || ||||| ||| ||||||| ||||||||| |  |||||||||| |||| |||||| || |||||||||||||    
T  5645 aacatcaaaaagcaagcatgaattttctagaagttttatcaagagttttgatcaaagcactggttcaaatagc 5717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 363 - 452
Target Start/End: Original strand, 5823 - 5911
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccggactggaccggtccggttcgctggcttat 452  Q
    ||||||||| | || || ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||    
T  5823 gattgatccggaatcctaaaaccctagatcaaacggccaggga-caaaggggaatggaccggactggaccggtccggttcactggcttat 5911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 5479 - 5522
Alignment:
Q  18 acattaacatatcaaatggcctttatcacatattcacaaatcaa 61  Q
    |||||||||||||||||||||||  |||||||| ||||||||||    
T  5479 acattaacatatcaaatggccttattcacatatccacaaatcaa 5522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 450
Target Start/End: Complemental strand, 2594 - 2503
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggctt 450  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||  ||||||||  ||| ||||||||||||| |||||||    
T  2594 acacgattgatctaggattctggaaccctagatcaaacggccaggaa-caaagggggttggaccggtcctgaaccggtccggttcactggctt 2503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 359 - 450
Target Start/End: Complemental strand, 17662 - 17571
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggctt 450  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||  ||||||||  ||| ||||||||||||| |||||||    
T  17662 acacgattgatctaggattctggaaccctagatcaaacggccaggaa-caaagggggttggaccggtcctgaaccggtccggttcactggctt 17571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0667 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 359 - 449
Target Start/End: Original strand, 7994 - 8084
Alignment:
Q  359 acacgattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| | |  ||||||||||||| ||||||    
T  7994 acacgattgatctaggattctgaaaccctagatcaaacggccaggaa-caagggggactggaccggaaataaaccggtccggttcactggct 8084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 363 - 449
Target Start/End: Original strand, 3451 - 3537
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    |||||||||||| |||||||||||||||||||||||||||||| | ||||||| |||||||| | |  ||||||||||||| ||||||    
T  3451 gattgatccagggttctgaaaccctagatcaaacggccaggaa-cgaaggggactggaccggaaataaaccggtccggttcactggct 3537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 16245 - 16291
Alignment:
Q  363 gattgatccaggattctgaaaccctagatcaaacggccaggaatcaa 409  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||    
T  16245 gattgatccaggatcctgaaaccctagatcaaacggcctggaatcaa 16291  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 456
Target Start/End: Original strand, 154929 - 155004
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaa 456  Q
    |||||||||||| |||||||||||| | |||||||  ||||||| || ||||||||||||||| |||||||||||||    
T  154929 aaaccctagatccaacggccaggaa-cgaaggggaccggaccggtcttggaccggtccggttcactggcttataaaa 155004  T

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Target: scaffold0240 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 21502 - 21575
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||| | ||||||| |||||| | | |||||||||||||||| ||||||||||    
T  21502 gaaaccctagatccaacggccaggaa-cgaaggggattggaccagtcctggaccggtccggttcactggcttata 21575  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 73779 - 73852
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||| |||||||||||||  ||||| | |||||||| | |||||||||||||||| ||||||||||    
T  73779 gaaaccctagatccaacggccaggaat-gaagggaattggaccggtcttggaccggtccggttcactggcttata 73852  T

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Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 381 - 453
Target Start/End: Complemental strand, 7652 - 7580
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttata 453  Q
    ||||||||||||||||||||||| ||  ||||| |||||||||| | |||||||||||||||| ||||| ||||    
T  7652 aaaccctagatcaaacggccagg-attgaagggaaatggaccggtcttggaccggtccggttcactggcctata 7580  T

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Target: scaffold0289 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 482
Target Start/End: Original strand, 16075 - 16176
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    ||||||||||||| |||||||||||||  |||| || |||||||| | |||||||||||||||| ||||| |||| || || |  ||| |||||||||||    
T  16075 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcatggaccggtccggttcactggc-tatataaagggactagcaccggttttttc 16172  T
Q  479 catt 482  Q
    ||||    
T  16173 catt 16176  T

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Target: scaffold0074 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 447
Target Start/End: Original strand, 12947 - 13013
Alignment:
Q  381 aaaccctagatcaaacggccaggaatcaaaggggaatggaccggac-tggaccggtccggttcgctgg 447  Q
    ||||||||||||||||||||||| ||  ||||| |||||||||| | |||||||||||||||| ||||    
T  12947 aaaccctagatcaaacggccagg-attgaagggaaatggaccggtcttggaccggtccggttcactgg 13013  T

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Target: scaffold0196 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 20845 - 20914
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccgg-actggaccggtccggttcgctggct 449  Q
    ||||||||||||| |||||||||||||  |||| || ||||||||  ||||||||||||||||| ||||||    
T  20845 gaaaccctagatccaacggccaggaat-gaaggagattggaccggtcctggaccggtccggttcactggct 20914  T

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Target: scaffold0161 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 478
Target Start/End: Original strand, 28324 - 28421
Alignment:
Q  380 gaaaccctagatcaaacggccaggaatcaaaggggaatggaccggact-ggaccggtccggttcgctggcttataaaacggaaggagctccggttttttc 478  Q
    ||||||||||||| ||||  ||||| | ||  |||| |||||||| || |||||||||| |||| |||||||||| || ||| ||||| |||||||||||    
T  28324 gaaaccctagatccaacgctcaggattgaa--gggattggaccggtcttggaccggtccagttcactggcttatataaaggatggagcaccggttttttc 28421  T

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