View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20568_high_23 (Length: 217)
Name: NF20568_high_23
Description: NF20568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20568_high_23 |
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Alignment Details
Target: chr5 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 4337060 - 4336887
Alignment:
| Q |
1 |
ggtcccatctttatcattgtcggaatcttcgccgaaaaggtccttccccgtgaaatccattttttcacggtctcttatgttgttgttatgtgatgtcagt |
100 |
Q |
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| T |
4337060 |
ggtcccatctttatcattgtcggaatcttcgccgaaaaggtccttccccgtgaaatccattttttcacggtctcttatgttgttgttatgtgatgtcagt |
4336961 |
T |
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| Q |
101 |
gttatttcgtcaacaataaaacctttgnnnnnnncttttacgctgttacactgttgtgttcgtgtaccttaaag |
174 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
4336960 |
gttatttcgtcaacaataaaacctttgtttttttcttttacgctgttacactgttgtgttcgtgtaccttaaag |
4336887 |
T |
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