View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20568_low_22 (Length: 237)
Name: NF20568_low_22
Description: NF20568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20568_low_22 |
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Alignment Details
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 4336866 - 4336653
Alignment:
| Q |
1 |
ttttttctttctctctcctttgttgggctttgttttaagcccattttactaatacacccctcgtgtccttacaacttaaagagaactcaagaggctcaat |
100 |
Q |
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| T |
4336866 |
ttttttctttctctctcctttgttgggctttgttttaagcccattttactaatacacccctcgtg-ccttacaacttaaagagaactcaagaggctcaat |
4336768 |
T |
|
| Q |
101 |
cttaaagagaaagttaagatgattaattagaatcgtgaagatgctttgagtttagtaaattaaagtaaatattttgaaagacccaagtcagattacaaga |
200 |
Q |
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| T |
4336767 |
cttaaagagaaagttaagatgattaattagaatcgtgaagatgctttgattttagtaaattaaagtaaatattttgaaagacccaagtcagattacaaga |
4336668 |
T |
|
| Q |
201 |
agcattttttgggtt |
215 |
Q |
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||||||||||||||| |
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| T |
4336667 |
agcattttttgggtt |
4336653 |
T |
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