View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20569_high_35 (Length: 247)
Name: NF20569_high_35
Description: NF20569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20569_high_35 |
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Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 44865499 - 44865263
Alignment:
| Q |
1 |
aagacaattaaagcagaccctagtaacaaagaggggggttgtttgctttgttagtcaagcatttgactgacccttgatgtacaaacttaattatgtttga |
100 |
Q |
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| T |
44865499 |
aagacaattaaagcagaccctagtaacaaagaggggggttgtttgctttgttagtcaagcatttgactgacccttgatgtacaaacttaattatgtttga |
44865400 |
T |
|
| Q |
101 |
gtgaatgctctccttaaaatattaatgtactagattttactgaactcttaattatttcagggtgccaaatgcgaaacctggaagagagagtacagaaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44865399 |
gtgaatgctctccttaaaatattaatgtactagattttactgaactcttaattatttcagggtgccaaatgcgaaacctggaagagagagtacagaaatt |
44865300 |
T |
|
| Q |
201 |
gaaatatacggaatgcaggggattccgccagatgtct |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
44865299 |
gaaatatacggaatgcaggggattccgccagatgtct |
44865263 |
T |
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