View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20569_high_43 (Length: 222)
Name: NF20569_high_43
Description: NF20569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20569_high_43 |
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Alignment Details
Target: chr3 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 52000666 - 52000852
Alignment:
| Q |
18 |
aaccacatagttgaaaaaccaactaaatcagctgaaagaaaactactactaatttgagaagcatacataagggaaaatcagcttcacaacccaaattcgc |
117 |
Q |
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| T |
52000666 |
aaccacatagttgaaaaaccaactaaatcagctgaaagaaaacta---ctaatttgagaagcatacacaagggaaaatcagcttcacaacccaaattcgc |
52000762 |
T |
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| Q |
118 |
caaggcatccacgcaaaaatatttaatctcccaatacgaatggctacttcctccataccaatattacctcctttgtatacaccatctctg |
207 |
Q |
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| T |
52000763 |
caaggcatccacgcaaaaatatttaatctcccaatacgaatggctacttcctccataccaatattacctcctttgtatacaccatctctg |
52000852 |
T |
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