View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20569_low_8 (Length: 445)

Name: NF20569_low_8
Description: NF20569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20569_low_8
NF20569_low_8
[»] chr7 (37 HSPs)
chr7 (27-401)||(32515444-32515817)
chr7 (21-221)||(16818198-16818398)
chr7 (413-445)||(2228971-2229003)
chr7 (413-445)||(37300141-37300173)
chr7 (413-445)||(42443685-42443717)
chr7 (413-445)||(47999776-47999808)
chr7 (414-445)||(2681093-2681124)
chr7 (414-445)||(5990187-5990218)
chr7 (414-445)||(9877309-9877340)
chr7 (414-445)||(10244931-10244962)
chr7 (414-445)||(12640631-12640662)
chr7 (414-445)||(15238886-15238917)
chr7 (414-445)||(19753010-19753041)
chr7 (414-445)||(23102600-23102631)
chr7 (414-445)||(25833552-25833583)
chr7 (414-445)||(29617402-29617433)
chr7 (414-445)||(32074437-32074468)
chr7 (414-445)||(35815835-35815866)
chr7 (414-445)||(35950125-35950156)
chr7 (414-445)||(36389708-36389739)
chr7 (414-445)||(36469747-36469778)
chr7 (410-445)||(41084032-41084067)
chr7 (414-445)||(44616599-44616630)
chr7 (414-445)||(47641042-47641073)
chr7 (415-445)||(5833037-5833067)
chr7 (415-445)||(26816700-26816730)
chr7 (414-442)||(24061374-24061402)
chr7 (417-445)||(24781030-24781058)
chr7 (413-445)||(27424835-27424867)
chr7 (417-445)||(27510299-27510327)
chr7 (413-445)||(30806111-30806143)
chr7 (413-445)||(31026215-31026247)
chr7 (413-445)||(31077945-31077977)
chr7 (417-445)||(35683169-35683197)
chr7 (413-445)||(36174386-36174418)
chr7 (417-445)||(36391946-36391974)
chr7 (413-445)||(46534790-46534822)
[»] chr6 (35 HSPs)
chr6 (21-364)||(10342555-10342896)
chr6 (70-212)||(10343052-10343194)
chr6 (413-445)||(4408354-4408386)
chr6 (413-445)||(8857086-8857118)
chr6 (413-445)||(17441881-17441913)
chr6 (413-445)||(19953870-19953902)
chr6 (414-445)||(607184-607215)
chr6 (414-445)||(1968993-1969024)
chr6 (414-445)||(3794215-3794246)
chr6 (414-445)||(7177292-7177323)
chr6 (414-445)||(7207841-7207872)
chr6 (414-445)||(7545326-7545357)
chr6 (414-445)||(7865397-7865428)
chr6 (414-445)||(9246424-9246455)
chr6 (414-445)||(9372243-9372274)
chr6 (414-445)||(9435623-9435654)
chr6 (414-445)||(10934596-10934627)
chr6 (414-445)||(15091445-15091476)
chr6 (414-445)||(22574867-22574898)
chr6 (414-445)||(30885612-30885643)
chr6 (414-445)||(33573814-33573845)
chr6 (416-445)||(2251837-2251866)
chr6 (412-445)||(8297622-8297655)
chr6 (412-445)||(19892318-19892351)
chr6 (412-445)||(22997331-22997364)
chr6 (412-445)||(23791037-23791070)
chr6 (417-445)||(3196619-3196647)
chr6 (413-445)||(3640510-3640542)
chr6 (417-445)||(4869740-4869768)
chr6 (413-445)||(5052115-5052147)
chr6 (417-445)||(8439675-8439703)
chr6 (413-445)||(21248528-21248560)
chr6 (413-445)||(30391262-30391294)
chr6 (413-445)||(30704956-30704988)
chr6 (413-445)||(31705895-31705927)
[»] chr3 (49 HSPs)
chr3 (21-221)||(1780027-1780228)
chr3 (266-346)||(16238975-16239055)
chr3 (412-445)||(7920315-7920348)
chr3 (412-445)||(45551851-45551884)
chr3 (413-445)||(3748644-3748676)
chr3 (413-445)||(7269951-7269983)
chr3 (413-445)||(22501973-22502005)
chr3 (413-445)||(31529000-31529032)
chr3 (413-445)||(39300380-39300412)
chr3 (413-445)||(46795971-46796003)
chr3 (414-445)||(882386-882417)
chr3 (414-445)||(2522923-2522954)
chr3 (414-445)||(11820001-11820032)
chr3 (414-445)||(19550503-19550534)
chr3 (414-445)||(19999864-19999895)
chr3 (414-445)||(28550361-28550392)
chr3 (414-445)||(30555269-30555300)
chr3 (414-445)||(31327543-31327574)
chr3 (414-445)||(31327760-31327791)
chr3 (414-445)||(32256596-32256627)
chr3 (414-445)||(33225390-33225421)
chr3 (414-445)||(37488502-37488533)
chr3 (414-445)||(37800653-37800684)
chr3 (414-445)||(39966116-39966147)
chr3 (414-445)||(40192153-40192184)
chr3 (414-445)||(40548300-40548331)
chr3 (414-445)||(40933873-40933904)
chr3 (414-445)||(44652024-44652055)
chr3 (414-445)||(45701341-45701372)
chr3 (414-445)||(48739786-48739817)
chr3 (414-445)||(50496856-50496887)
chr3 (414-445)||(52410283-52410314)
chr3 (414-445)||(52945892-52945923)
chr3 (414-445)||(53163591-53163622)
chr3 (414-445)||(53347332-53347363)
chr3 (416-445)||(6920005-6920034)
chr3 (26-107)||(16239213-16239294)
chr3 (417-445)||(4139000-4139028)
chr3 (417-445)||(9176628-9176656)
chr3 (413-445)||(10176945-10176977)
chr3 (413-445)||(13638287-13638319)
chr3 (417-445)||(15975421-15975449)
chr3 (413-445)||(19996494-19996526)
chr3 (413-445)||(34102653-34102685)
chr3 (417-445)||(34757529-34757557)
chr3 (413-445)||(45871013-45871045)
chr3 (417-445)||(47098732-47098760)
chr3 (417-445)||(52046427-52046455)
chr3 (413-445)||(53752742-53752774)
[»] chr2 (29 HSPs)
chr2 (207-339)||(31093167-31093298)
chr2 (412-445)||(43895908-43895941)
chr2 (413-445)||(4183172-4183204)
chr2 (414-445)||(1260182-1260213)
chr2 (414-445)||(3446727-3446758)
chr2 (414-445)||(8250343-8250374)
chr2 (414-445)||(11050799-11050830)
chr2 (414-445)||(17078454-17078485)
chr2 (414-445)||(18694782-18694813)
chr2 (414-445)||(19281605-19281636)
chr2 (414-445)||(19684070-19684101)
chr2 (414-445)||(22653686-22653717)
chr2 (414-445)||(25857337-25857368)
chr2 (414-445)||(27297172-27297203)
chr2 (414-445)||(33228975-33229006)
chr2 (414-445)||(38400307-38400338)
chr2 (414-445)||(44822420-44822451)
chr2 (414-445)||(44948593-44948624)
chr2 (415-444)||(10463241-10463270)
chr2 (415-444)||(19958097-19958126)
chr2 (415-444)||(20919608-20919637)
chr2 (415-444)||(23405194-23405223)
chr2 (416-445)||(34613978-34614007)
chr2 (413-445)||(1844813-1844845)
chr2 (414-442)||(2289607-2289635)
chr2 (417-445)||(2806543-2806571)
chr2 (413-445)||(33233264-33233296)
chr2 (413-445)||(38525595-38525627)
chr2 (413-445)||(44857276-44857308)
[»] chr5 (40 HSPs)
chr5 (198-338)||(17828633-17828773)
chr5 (412-445)||(32706317-32706350)
chr5 (413-445)||(21749419-21749451)
chr5 (209-269)||(24124589-24124649)
chr5 (414-445)||(1743124-1743155)
chr5 (414-445)||(2848210-2848241)
chr5 (414-445)||(4417727-4417758)
chr5 (414-445)||(6518818-6518849)
chr5 (414-445)||(9835030-9835061)
chr5 (414-445)||(11897245-11897276)
chr5 (414-445)||(12463753-12463784)
chr5 (414-445)||(12891554-12891585)
chr5 (414-445)||(13621988-13622019)
chr5 (414-445)||(16603395-16603426)
chr5 (414-445)||(17545214-17545245)
chr5 (414-445)||(21918049-21918080)
chr5 (414-445)||(25648127-25648158)
chr5 (414-445)||(25729482-25729513)
chr5 (414-445)||(27765254-27765285)
chr5 (414-445)||(29713418-29713449)
chr5 (414-445)||(32505685-32505716)
chr5 (414-445)||(41179845-41179876)
chr5 (414-445)||(41477400-41477431)
chr5 (414-445)||(42320314-42320345)
chr5 (414-445)||(42916386-42916417)
chr5 (414-444)||(13956899-13956929)
chr5 (415-444)||(3198325-3198354)
chr5 (415-444)||(4067980-4068009)
chr5 (416-445)||(4745918-4745947)
chr5 (412-445)||(18815343-18815376)
chr5 (416-445)||(25472625-25472654)
chr5 (413-445)||(2328588-2328620)
chr5 (413-445)||(5966825-5966857)
chr5 (413-445)||(11795503-11795535)
chr5 (413-445)||(18993503-18993535)
chr5 (417-445)||(23292459-23292487)
chr5 (413-445)||(24033073-24033105)
chr5 (417-445)||(35515512-35515540)
chr5 (413-441)||(40081874-40081902)
chr5 (413-445)||(42525396-42525428)
[»] chr8 (49 HSPs)
chr8 (412-445)||(11875881-11875914)
chr8 (412-445)||(11890888-11890921)
chr8 (412-445)||(16449120-16449153)
chr8 (413-445)||(10736916-10736948)
chr8 (413-445)||(26022243-26022275)
chr8 (413-445)||(28909461-28909493)
chr8 (413-445)||(34413058-34413090)
chr8 (414-445)||(12267-12298)
chr8 (414-445)||(94553-94584)
chr8 (414-445)||(257536-257567)
chr8 (414-445)||(658353-658384)
chr8 (414-445)||(844089-844120)
chr8 (414-445)||(1937307-1937338)
chr8 (414-445)||(2168489-2168520)
chr8 (414-445)||(6280477-6280508)
chr8 (414-445)||(8265265-8265296)
chr8 (414-445)||(9187265-9187296)
chr8 (414-445)||(17027922-17027953)
chr8 (414-445)||(17558358-17558389)
chr8 (414-445)||(17698519-17698550)
chr8 (414-445)||(29514623-29514654)
chr8 (414-445)||(29716857-29716888)
chr8 (414-445)||(30972859-30972890)
chr8 (414-445)||(32719649-32719680)
chr8 (414-445)||(33604214-33604245)
chr8 (414-445)||(35939484-35939515)
chr8 (414-445)||(38745321-38745352)
chr8 (414-445)||(39362262-39362293)
chr8 (414-445)||(41689879-41689910)
chr8 (414-445)||(43656033-43656064)
chr8 (414-445)||(44340387-44340418)
chr8 (414-444)||(14876645-14876675)
chr8 (415-445)||(23178933-23178963)
chr8 (415-444)||(481009-481038)
chr8 (412-445)||(2792774-2792807)
chr8 (415-444)||(13059220-13059249)
chr8 (412-445)||(37717358-37717391)
chr8 (412-445)||(43284008-43284041)
chr8 (413-445)||(2787123-2787155)
chr8 (413-445)||(7797126-7797158)
chr8 (413-445)||(7816399-7816431)
chr8 (413-445)||(20540148-20540180)
chr8 (413-445)||(26280826-26280858)
chr8 (417-445)||(34158699-34158727)
chr8 (413-445)||(34894365-34894397)
chr8 (413-445)||(36540283-36540315)
chr8 (413-445)||(37092087-37092119)
chr8 (413-445)||(38955236-38955268)
chr8 (417-445)||(44673690-44673718)
[»] chr4 (47 HSPs)
chr4 (412-445)||(8965089-8965122)
chr4 (413-445)||(8433665-8433697)
chr4 (413-445)||(43147426-43147458)
chr4 (413-445)||(43207665-43207697)
chr4 (413-445)||(46105531-46105563)
chr4 (413-445)||(48798275-48798307)
chr4 (414-445)||(3764050-3764081)
chr4 (414-445)||(3847678-3847709)
chr4 (414-445)||(6371111-6371142)
chr4 (414-445)||(18360490-18360521)
chr4 (414-445)||(23705195-23705226)
chr4 (414-445)||(24680128-24680159)
chr4 (414-445)||(26868346-26868377)
chr4 (414-445)||(26919510-26919541)
chr4 (414-445)||(35219542-35219573)
chr4 (414-445)||(35465432-35465463)
chr4 (414-445)||(36602408-36602439)
chr4 (414-445)||(37935858-37935889)
chr4 (414-445)||(39023172-39023203)
chr4 (414-445)||(40051619-40051650)
chr4 (414-445)||(43596892-43596923)
chr4 (414-445)||(44602482-44602513)
chr4 (414-445)||(45126129-45126160)
chr4 (414-445)||(45849044-45849075)
chr4 (414-445)||(46775072-46775103)
chr4 (414-445)||(47934114-47934145)
chr4 (414-445)||(48569218-48569249)
chr4 (414-445)||(48949650-48949681)
chr4 (414-445)||(49901479-49901510)
chr4 (414-445)||(55251393-55251424)
chr4 (415-444)||(3161019-3161048)
chr4 (415-444)||(33933782-33933811)
chr4 (412-445)||(34353774-34353807)
chr4 (415-444)||(55055914-55055943)
chr4 (413-445)||(4958598-4958630)
chr4 (413-445)||(9761111-9761143)
chr4 (417-445)||(15604082-15604110)
chr4 (417-445)||(22230476-22230504)
chr4 (417-445)||(22788716-22788744)
chr4 (417-445)||(24997476-24997504)
chr4 (414-442)||(29329868-29329896)
chr4 (413-445)||(30217595-30217627)
chr4 (417-445)||(40994145-40994173)
chr4 (417-445)||(43978008-43978036)
chr4 (413-445)||(50442783-50442815)
chr4 (414-442)||(52483221-52483249)
chr4 (413-445)||(55536376-55536408)
[»] chr1 (43 HSPs)
chr1 (412-445)||(42054328-42054361)
chr1 (413-445)||(1836499-1836531)
chr1 (413-445)||(10664836-10664868)
chr1 (413-445)||(17671452-17671484)
chr1 (413-445)||(21265652-21265684)
chr1 (413-445)||(32594247-32594279)
chr1 (413-445)||(33207201-33207233)
chr1 (413-445)||(51050186-51050218)
chr1 (414-445)||(1151756-1151787)
chr1 (414-445)||(1570234-1570265)
chr1 (414-445)||(3269616-3269647)
chr1 (414-445)||(4482640-4482671)
chr1 (414-445)||(6438106-6438137)
chr1 (414-445)||(6702573-6702604)
chr1 (414-445)||(6893279-6893310)
chr1 (414-445)||(7166269-7166300)
chr1 (414-445)||(8865851-8865882)
chr1 (414-445)||(15819643-15819674)
chr1 (414-445)||(18216903-18216934)
chr1 (414-445)||(22563383-22563414)
chr1 (414-445)||(25999847-25999878)
chr1 (414-445)||(26584788-26584819)
chr1 (414-445)||(33254725-33254756)
chr1 (414-445)||(33274897-33274928)
chr1 (414-445)||(35605665-35605696)
chr1 (414-445)||(40519586-40519617)
chr1 (414-445)||(42490452-42490483)
chr1 (414-445)||(46965737-46965768)
chr1 (414-445)||(48638529-48638560)
chr1 (414-445)||(50899552-50899583)
chr1 (21-79)||(10448651-10448709)
chr1 (414-444)||(23933111-23933141)
chr1 (416-445)||(16343027-16343056)
chr1 (412-445)||(16526219-16526252)
chr1 (415-444)||(33200036-33200065)
chr1 (413-445)||(6463078-6463110)
chr1 (417-445)||(9866226-9866254)
chr1 (417-445)||(24874971-24874999)
chr1 (413-445)||(34058210-34058242)
chr1 (416-444)||(36666619-36666647)
chr1 (413-445)||(37662599-37662631)
chr1 (413-445)||(40520826-40520858)
chr1 (413-445)||(45333753-45333785)
[»] scaffold0275 (1 HSPs)
scaffold0275 (413-445)||(8817-8849)
[»] scaffold0088 (1 HSPs)
scaffold0088 (413-445)||(10868-10900)
[»] scaffold0707 (1 HSPs)
scaffold0707 (414-445)||(62-93)
[»] scaffold0608 (1 HSPs)
scaffold0608 (414-445)||(8963-8994)
[»] scaffold0445 (1 HSPs)
scaffold0445 (414-445)||(4056-4087)
[»] scaffold0128 (1 HSPs)
scaffold0128 (414-445)||(17617-17648)
[»] scaffold0121 (1 HSPs)
scaffold0121 (414-445)||(46523-46554)
[»] scaffold0100 (1 HSPs)
scaffold0100 (414-445)||(45881-45912)
[»] scaffold0024 (1 HSPs)
scaffold0024 (414-445)||(59780-59811)
[»] scaffold0009 (1 HSPs)
scaffold0009 (414-445)||(266739-266770)
[»] scaffold0002 (1 HSPs)
scaffold0002 (414-445)||(8867-8898)
[»] scaffold0555 (1 HSPs)
scaffold0555 (415-444)||(9309-9338)
[»] scaffold0460 (1 HSPs)
scaffold0460 (413-445)||(12455-12487)
[»] scaffold0366 (1 HSPs)
scaffold0366 (417-445)||(902-930)
[»] scaffold0014 (1 HSPs)
scaffold0014 (417-445)||(12303-12331)


Alignment Details
Target: chr7 (Bit Score: 315; Significance: 1e-177; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 27 - 401
Target Start/End: Original strand, 32515444 - 32515817
Alignment:
Q  27 ttctctccttccagataactcaagaagtcgaaaaccaaatcataaacatgaaagagcatcgcgatcttgcaagacctgaagctgaaccaagctgaaggaa 126  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  32515444 ttctctccttccagataacccaagaagtcgcaaaccaaatcataaacatgaaagagcatcgcgatcttgcaagacctgaagccgaaccaaactgaaggaa 32515543  T
Q  127 atgatcctctgtgtttgacggcaaagctgtataaacatgtaaccaattccgaattaaatgccaaagttgagcaaaaacaccgcaatttaagaatagatat 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||| |    
T  32515544 atgatcctctgtgtttgacggcaaagctgtataaacatgtaaccaattccgaactaaatgccaaagctgagcaaaaacactgcaatttaagaatagatgt 32515643  T
Q  227 tcatttgtctcctgcacaccacacccacctacacacatttgatcctcatactgaattatcccccgacgaaataaattaaccttaataggtagtctattcc 326  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  32515644 tcatttgtctcctgcacaccaca-ccacctacacacatttgatcctcatactgaattatcccccaacgaaataaattaaccttagtagatagtctattcc 32515742  T
Q  327 aaaagagccgccaagcaaaagatcaagaccttaagcggtgtaatactaacttaattgaaatcagtttgattaaat 401  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32515743 aaaagggccgtcaagcaaaagatcaagaccttaagcggtgtaatactaacttaattgaaatcagtttgattaaat 32515817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 16818398 - 16818198
Alignment:
Q  21 tgttgtttctctccttccagataactcaagaagtcgaaaaccaaatcataaacatgaaagagcatcgcgatcttgcaagacctgaagctgaaccaagctg 120  Q
    |||||||||| | |||||||||||| | |||||||| |||||||||||||||||| |||||||| ||||||||||||  ||| ||||| || |||| |||    
T  16818398 tgttgtttcttttcttccagataaccctagaagtcgcaaaccaaatcataaacattaaagagcaccgcgatcttgcataaccagaagccgatccaaactg 16818299  T
Q  121 aaggaaatgatcctctgtgtttgacggcaaagctgtataaacatgtaaccaattccgaattaaatgccaaagttgagcaaaaacaccgcaatttaagaat 220  Q
    |||||| ||||||||||| ||||||||||||||||||||||| | ||||||||||||||  || |||||||| |||||||||||||||||||||||||||    
T  16818298 aaggaagtgatcctctgtatttgacggcaaagctgtataaacctttaaccaattccgaaccaattgccaaagctgagcaaaaacaccgcaatttaagaat 16818199  T
Q  221 a 221  Q
    |    
T  16818198 a 16818198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 2228971 - 2229003
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  2228971 aatccccgtgagcttagctcagttggtagggat 2229003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 37300173 - 37300141
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  37300173 aatccccgtgagcttagctcagttggtagggat 37300141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 42443685 - 42443717
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  42443685 aatccccgtgagcttagctcagttggtagggat 42443717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 47999776 - 47999808
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  47999776 aatccccgtgagcttagctcagttggtagggat 47999808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 2681093 - 2681124
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  2681093 atccccgtgagcttagctcagttggtagggat 2681124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 5990218 - 5990187
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  5990218 atccccgtgagcttagctcagttggtagggat 5990187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 9877340 - 9877309
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  9877340 atccccgtgagcttagctcagttggtagggat 9877309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 10244962 - 10244931
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  10244962 atccccgtgagcttagctcagttggtagggat 10244931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 12640662 - 12640631
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  12640662 atccccgtgagcttagctcagttggtagggat 12640631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 15238886 - 15238917
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  15238886 atccccgtgagcttagctcagttggtagggat 15238917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 19753041 - 19753010
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  19753041 atccccgtgagcttagctcagttggtagggat 19753010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 23102631 - 23102600
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  23102631 atccccgtgagcttagctcagttggtagggat 23102600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 25833552 - 25833583
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  25833552 atccccgtgagcttagctcagttggtagggat 25833583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 29617402 - 29617433
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  29617402 atccccgtgagcttagctcagttggtagggat 29617433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 32074468 - 32074437
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  32074468 atccccgtgagcttagctcagttggtagggat 32074437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 35815835 - 35815866
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  35815835 atccccgtgagcttagctcagttggtagggat 35815866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 35950125 - 35950156
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  35950125 atccccgtgagcttagctcagttggtagggat 35950156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 36389739 - 36389708
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  36389739 atccccgtgagcttagctcagttggtagggat 36389708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 36469778 - 36469747
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  36469778 atccccgtgagcttagctcagttggtagggat 36469747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 445
Target Start/End: Original strand, 41084032 - 41084067
Alignment:
Q  410 tggaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||| ||||||||||||||||||||||||||||    
T  41084032 tggaatcgccgtgagcttagctcagttggtagggat 41084067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 44616599 - 44616630
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  44616599 atccccgtgagcttagctcagttggtagggat 44616630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 47641042 - 47641073
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  47641042 atccccgtgagcttagctcagttggtagggat 47641073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 445
Target Start/End: Original strand, 5833037 - 5833067
Alignment:
Q  415 tccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||    
T  5833037 tccccgtgagcttagctcagttggtagggat 5833067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 445
Target Start/End: Complemental strand, 26816730 - 26816700
Alignment:
Q  415 tccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||    
T  26816730 tccccgtgagcttagctcagttggtagggat 26816700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 442
Target Start/End: Complemental strand, 24061402 - 24061374
Alignment:
Q  414 atccccgtgagcttagctcagttggtagg 442  Q
    |||||||||||||||||||||||||||||    
T  24061402 atccccgtgagcttagctcagttggtagg 24061374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 24781030 - 24781058
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  24781030 cccgtgagcttagctcagttggtagggat 24781058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 27424835 - 27424867
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||| ||||||    
T  27424835 aatccccgtgagcttagctcagttggaagggat 27424867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 27510327 - 27510299
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  27510327 cccgtgagcttagctcagttggtagggat 27510299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 30806111 - 30806143
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||| ||||||||||||||||||||    
T  30806111 aatccccgtgagtttagctcagttggtagggat 30806143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 31026215 - 31026247
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||| |||||||||||||||||||    
T  31026215 aatccccgtgagcgtagctcagttggtagggat 31026247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 31077977 - 31077945
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||| ||||||||||||||||    
T  31077977 aatccccgtgagcttaactcagttggtagggat 31077945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 35683197 - 35683169
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  35683197 cccgtgagcttagctcagttggtagggat 35683169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 36174386 - 36174418
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||| ||||||||||||||||||||||||||||    
T  36174386 aatctccgtgagcttagctcagttggtagggat 36174418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 36391974 - 36391946
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  36391974 cccgtgagcttagctcagttggtagggat 36391946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 46534822 - 46534790
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||| |||||||||||||||||||||||||    
T  46534822 aatccccatgagcttagctcagttggtagggat 46534790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 232; Significance: 1e-128; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 21 - 364
Target Start/End: Original strand, 10342555 - 10342896
Alignment:
Q  21 tgttgtttctctccttccagataactcaagaagtcgaaaaccaaatcataaacatgaaagagcatcgcgatcttgcaagacctgaagctgaaccaagctg 120  Q
    ||||||||||||| ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  10342555 tgttgtttctctcattccagataacccaaaaagtcgcaaaccaaatcataaacatgaaagagcatcgcgatcttgcaagacctgaagccgaaccaaactg 10342654  T
Q  121 aaggaaatgatcctctgtgtttgacggcaaagctgtataaacatgtaaccaattccgaattaaatgccaaagttgagcaaaaacaccgcaatttaagaat 220  Q
    |||||| |||||||||||||||||||| |||||| |||||| ||||||||| |||||||  ||||| ||||| ||||||||||||||||||||||| |||    
T  10342655 aaggaa-tgatcctctgtgtttgacggaaaagctatataaatatgtaaccagttccgaaccaaatggcaaagctgagcaaaaacaccgcaatttaaaaat 10342753  T
Q  221 agatattcatttgtctcctgcacaccacacccacctacacacatttgatcctcatactgaattatcccccgacgaaataaattaaccttaataggtagtc 320  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| ||||    
T  10342754 agatgttcattagtctcctgcacaccacacccacctacacacatttgatcctcatattgaattatcccccgacgaaataaattagccttagtaggaagtc 10342853  T
Q  321 tattccaaaagagccgccaagcaaaagatcaagaccttaagcgg 364  Q
    |||| | |||||||| |||||||||| |||||||||||||||||    
T  10342854 tatttcgaaagagccaccaagcaaaa-atcaagaccttaagcgg 10342896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 10343052 - 10343194
Alignment:
Q  70 aaacatgaaagagcatcgcgatcttgcaagacctgaagctgaaccaagctgaaggaaatgatcctctgtgtttgacggcaaagctgtataaacatgtaac 169  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  10343052 aaacatgaaagagcatcgcgatcttgcaagacctgaagccgaaccaaactgaaggaaatgatcctctgtgtttgacggcaaagttgtataaacatttaac 10343151  T
Q  170 caattccgaattaaatgccaaagttgagcaaaaacaccgcaat 212  Q
    ||||||||||  ||||||||||| |||||||||||||||||||    
T  10343152 caattccgaaccaaatgccaaagctgagcaaaaacaccgcaat 10343194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 4408354 - 4408386
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  4408354 aatccccgtgagcttagctcagttggtagggat 4408386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 8857086 - 8857118
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  8857086 aatccccgtgagcttagctcagttggtagggat 8857118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 17441913 - 17441881
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  17441913 aatccccgtgagcttagctcagttggtagggat 17441881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 19953902 - 19953870
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  19953902 aatccccgtgagcttagctcagttggtagggat 19953870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 607184 - 607215
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  607184 atccccgtgagcttagctcagttggtagggat 607215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 1968993 - 1969024
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  1968993 atccccgtgagcttagctcagttggtagggat 1969024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 3794246 - 3794215
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  3794246 atccccgtgagcttagctcagttggtagggat 3794215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 7177292 - 7177323
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  7177292 atccccgtgagcttagctcagttggtagggat 7177323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 7207841 - 7207872
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  7207841 atccccgtgagcttagctcagttggtagggat 7207872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 7545326 - 7545357
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  7545326 atccccgtgagcttagctcagttggtagggat 7545357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 7865428 - 7865397
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  7865428 atccccgtgagcttagctcagttggtagggat 7865397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 9246455 - 9246424
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  9246455 atccccgtgagcttagctcagttggtagggat 9246424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 9372274 - 9372243
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  9372274 atccccgtgagcttagctcagttggtagggat 9372243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 9435623 - 9435654
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  9435623 atccccgtgagcttagctcagttggtagggat 9435654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 10934596 - 10934627
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  10934596 atccccgtgagcttagctcagttggtagggat 10934627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 15091445 - 15091476
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  15091445 atccccgtgagcttagctcagttggtagggat 15091476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 22574867 - 22574898
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  22574867 atccccgtgagcttagctcagttggtagggat 22574898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 30885643 - 30885612
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  30885643 atccccgtgagcttagctcagttggtagggat 30885612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 33573814 - 33573845
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  33573814 atccccgtgagcttagctcagttggtagggat 33573845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 445
Target Start/End: Original strand, 2251837 - 2251866
Alignment:
Q  416 ccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||    
T  2251837 ccccgtgagcttagctcagttggtagggat 2251866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 8297622 - 8297655
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||| |||||||||||    
T  8297622 gaatccccgtgagcttagctcaattggtagggat 8297655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 19892351 - 19892318
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||| |||||||||||||||    
T  19892351 gaatccccgtgagcttagttcagttggtagggat 19892318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 22997331 - 22997364
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||| ||||||||||||||||||||||||||||    
T  22997331 gaatctccgtgagcttagctcagttggtagggat 22997364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 23791070 - 23791037
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||| ||||||||||||||||||||||||||||    
T  23791070 gaatctccgtgagcttagctcagttggtagggat 23791037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 3196619 - 3196647
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  3196619 cccgtgagcttagctcagttggtagggat 3196647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 3640510 - 3640542
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||| |||||||||||||||||||||||||||    
T  3640510 aatcctcgtgagcttagctcagttggtagggat 3640542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 4869768 - 4869740
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  4869768 cccgtgagcttagctcagttggtagggat 4869740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 5052147 - 5052115
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||| |||||||||||    
T  5052147 aatccccgtgagcttagctcaattggtagggat 5052115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 8439675 - 8439703
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  8439675 cccgtgagcttagctcagttggtagggat 8439703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 21248528 - 21248560
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||| |||||||||||||||||||||||    
T  21248528 aatccccgtaagcttagctcagttggtagggat 21248560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 30391294 - 30391262
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||| |||||||    
T  30391294 aatccccgtgagcttagctcagttgttagggat 30391262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 30704956 - 30704988
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||| |||||||||||||||    
T  30704956 aatccccgtgagcttagttcagttggtagggat 30704988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 31705895 - 31705927
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||| ||||    
T  31705895 aatccccgtgagcttagctcagttggtatggat 31705927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 1780228 - 1780027
Alignment:
Q  21 tgttgtttctctccttccagataactcaagaagtcgaaaaccaaatcataaacatgaaagagcatcgcgatcttgcaagacctgaagctgaaccaagctg 120  Q
    |||||||||| | ||||||||||||||||||||||| |||  ||||||||||||  |||||||| | ||||||||||  | | ||||| || |||| |||    
T  1780228 tgttgtttcttttcttccagataactcaagaagtcgcaaagtaaatcataaacaataaagagcaccacgatcttgcataagcagaagccgagccaaactg 1780129  T
Q  121 aaggaaatgatcctctgtgtttgacggcaaagctgtataaacatgtaaccaa-ttccgaattaaatgccaaagttgagcaaaaacaccgcaatttaagaa 219  Q
    |||||| ||||||||||| ||||||| |||||||||||||||   ||||||| ||| |||  || || ||||| ||||||||||||||||||||||||||    
T  1780128 aaggaagtgatcctctgtatttgacgacaaagctgtataaacccttaaccaatttctgaaccaattgtcaaagctgagcaaaaacaccgcaatttaagaa 1780029  T
Q  220 ta 221  Q
    ||    
T  1780028 ta 1780027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 346
Target Start/End: Complemental strand, 16239055 - 16238975
Alignment:
Q  266 tgatcctcatactgaattatcccccgacgaaataaattaaccttaataggtagtctattccaaaagagccgccaagcaaaa 346  Q
    ||||| ||||||||||| |||||||| | |||||||||| |||| ||||| | |||||||| |||||| |||||| |||||    
T  16239055 tgatcttcatactgaatgatcccccgtctaaataaattagccttcataggcaatctattccgaaagaggcgccaaccaaaa 16238975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 7920315 - 7920348
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||||    
T  7920315 gaatccccgtgagcttagctcagttggtagggat 7920348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 45551884 - 45551851
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||||    
T  45551884 gaatccccgtgagcttagctcagttggtagggat 45551851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 3748676 - 3748644
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  3748676 aatccccgtgagcttagctcagttggtagggat 3748644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 7269951 - 7269983
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  7269951 aatccccgtgagcttagctcagttggtagggat 7269983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 22502005 - 22501973
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  22502005 aatccccgtgagcttagctcagttggtagggat 22501973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 31529032 - 31529000
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  31529032 aatccccgtgagcttagctcagttggtagggat 31529000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 39300380 - 39300412
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  39300380 aatccccgtgagcttagctcagttggtagggat 39300412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 46796003 - 46795971
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  46796003 aatccccgtgagcttagctcagttggtagggat 46795971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 882386 - 882417
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  882386 atccccgtgagcttagctcagttggtagggat 882417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 2522923 - 2522954
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  2522923 atccccgtgagcttagctcagttggtagggat 2522954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 11820001 - 11820032
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  11820001 atccccgtgagcttagctcagttggtagggat 11820032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 19550503 - 19550534
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  19550503 atccccgtgagcttagctcagttggtagggat 19550534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 19999864 - 19999895
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  19999864 atccccgtgagcttagctcagttggtagggat 19999895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 28550392 - 28550361
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  28550392 atccccgtgagcttagctcagttggtagggat 28550361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 30555300 - 30555269
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  30555300 atccccgtgagcttagctcagttggtagggat 30555269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 31327574 - 31327543
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  31327574 atccccgtgagcttagctcagttggtagggat 31327543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 31327791 - 31327760
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  31327791 atccccgtgagcttagctcagttggtagggat 31327760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 32256627 - 32256596
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  32256627 atccccgtgagcttagctcagttggtagggat 32256596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 33225421 - 33225390
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  33225421 atccccgtgagcttagctcagttggtagggat 33225390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 37488533 - 37488502
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  37488533 atccccgtgagcttagctcagttggtagggat 37488502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 37800684 - 37800653
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  37800684 atccccgtgagcttagctcagttggtagggat 37800653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 39966147 - 39966116
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  39966147 atccccgtgagcttagctcagttggtagggat 39966116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 40192153 - 40192184
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  40192153 atccccgtgagcttagctcagttggtagggat 40192184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 40548300 - 40548331
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  40548300 atccccgtgagcttagctcagttggtagggat 40548331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 40933904 - 40933873
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  40933904 atccccgtgagcttagctcagttggtagggat 40933873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 44652055 - 44652024
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  44652055 atccccgtgagcttagctcagttggtagggat 44652024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 45701341 - 45701372
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  45701341 atccccgtgagcttagctcagttggtagggat 45701372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 48739817 - 48739786
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  48739817 atccccgtgagcttagctcagttggtagggat 48739786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 50496887 - 50496856
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  50496887 atccccgtgagcttagctcagttggtagggat 50496856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 52410314 - 52410283
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  52410314 atccccgtgagcttagctcagttggtagggat 52410283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 52945892 - 52945923
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  52945892 atccccgtgagcttagctcagttggtagggat 52945923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 53163591 - 53163622
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  53163591 atccccgtgagcttagctcagttggtagggat 53163622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 53347363 - 53347332
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  53347363 atccccgtgagcttagctcagttggtagggat 53347332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 445
Target Start/End: Complemental strand, 6920034 - 6920005
Alignment:
Q  416 ccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||    
T  6920034 ccccgtgagcttagctcagttggtagggat 6920005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 16239294 - 16239213
Alignment:
Q  26 tttctctccttccagataactcaagaagtcgaaaaccaaatcataaacatgaaagagcatcgcgatcttgcaagacctgaag 107  Q
    ||||| |||||||| || ||||||||| | | ||||||||| | | |||| ||||| || |||||| |||||||||||||||    
T  16239294 tttctttccttccaaatgactcaagaacttgcaaaccaaatgagatacataaaagaacaccgcgattttgcaagacctgaag 16239213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 4139000 - 4139028
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  4139000 cccgtgagcttagctcagttggtagggat 4139028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 9176656 - 9176628
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  9176656 cccgtgagcttagctcagttggtagggat 9176628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 10176977 - 10176945
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||| ||||||||||||||||||||    
T  10176977 aatccccgtgaggttagctcagttggtagggat 10176945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 13638319 - 13638287
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||| |||||||||||||||    
T  13638319 aatccccgtgagcttagttcagttggtagggat 13638287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 15975449 - 15975421
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  15975449 cccgtgagcttagctcagttggtagggat 15975421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 19996526 - 19996494
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||| |||||||||||||||||||    
T  19996526 aatccccgtgagcgtagctcagttggtagggat 19996494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 34102685 - 34102653
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||| |||||||||||||||    
T  34102685 aatccccgtgagcttagttcagttggtagggat 34102653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 34757529 - 34757557
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  34757529 cccgtgagcttagctcagttggtagggat 34757557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 45871013 - 45871045
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||| ||||||||||||||||||||    
T  45871013 aatccccgtgagtttagctcagttggtagggat 45871045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 47098732 - 47098760
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  47098732 cccgtgagcttagctcagttggtagggat 47098760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 52046455 - 52046427
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  52046455 cccgtgagcttagctcagttggtagggat 52046427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 53752774 - 53752742
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||| ||||||||||||||||    
T  53752774 aatccccgtgagcttaactcagttggtagggat 53752742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 7e-19; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 207 - 339
Target Start/End: Original strand, 31093167 - 31093298
Alignment:
Q  207 cgcaatttaagaatagatattcatttgtctcctgcacaccacacccacctacacacatttgatcctcatactgaattatcccccgacgaaataaattaac 306  Q
    ||||||||||||||| ||   |||| ||||||||||  ||||||||||| ||||||| |||||||||| | ||||| || || ||||||||||||||| |    
T  31093167 cgcaatttaagaataaatgaccattagtctcctgcattccacacccaccgacacacaattgatcctcaaattgaataat-ccacgacgaaataaattagc 31093265  T
Q  307 cttaataggtagtctattccaaaagagccgcca 339  Q
    |||| |||| | |||||||| ||| ||||||||    
T  31093266 cttagtaggcaatctattccgaaaaagccgcca 31093298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 43895908 - 43895941
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||||    
T  43895908 gaatccccgtgagcttagctcagttggtagggat 43895941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 4183172 - 4183204
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  4183172 aatccccgtgagcttagctcagttggtagggat 4183204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 1260182 - 1260213
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  1260182 atccccgtgagcttagctcagttggtagggat 1260213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 3446727 - 3446758
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  3446727 atccccgtgagcttagctcagttggtagggat 3446758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 8250374 - 8250343
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  8250374 atccccgtgagcttagctcagttggtagggat 8250343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 11050830 - 11050799
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  11050830 atccccgtgagcttagctcagttggtagggat 11050799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 17078454 - 17078485
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  17078454 atccccgtgagcttagctcagttggtagggat 17078485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 18694782 - 18694813
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  18694782 atccccgtgagcttagctcagttggtagggat 18694813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 19281605 - 19281636
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  19281605 atccccgtgagcttagctcagttggtagggat 19281636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 19684070 - 19684101
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  19684070 atccccgtgagcttagctcagttggtagggat 19684101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 22653717 - 22653686
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  22653717 atccccgtgagcttagctcagttggtagggat 22653686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 25857368 - 25857337
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  25857368 atccccgtgagcttagctcagttggtagggat 25857337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 27297172 - 27297203
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  27297172 atccccgtgagcttagctcagttggtagggat 27297203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 33229006 - 33228975
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  33229006 atccccgtgagcttagctcagttggtagggat 33228975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 38400307 - 38400338
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  38400307 atccccgtgagcttagctcagttggtagggat 38400338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 44822420 - 44822451
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  44822420 atccccgtgagcttagctcagttggtagggat 44822451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 44948593 - 44948624
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  44948593 atccccgtgagcttagctcagttggtagggat 44948624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Complemental strand, 10463270 - 10463241
Alignment:
Q  415 tccccgtgagcttagctcagttggtaggga 444  Q
    ||||||||||||||||||||||||||||||    
T  10463270 tccccgtgagcttagctcagttggtaggga 10463241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Original strand, 19958097 - 19958126
Alignment:
Q  415 tccccgtgagcttagctcagttggtaggga 444  Q
    ||||||||||||||||||||||||||||||    
T  19958097 tccccgtgagcttagctcagttggtaggga 19958126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Original strand, 20919608 - 20919637
Alignment:
Q  415 tccccgtgagcttagctcagttggtaggga 444  Q
    ||||||||||||||||||||||||||||||    
T  20919608 tccccgtgagcttagctcagttggtaggga 20919637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Original strand, 23405194 - 23405223
Alignment:
Q  415 tccccgtgagcttagctcagttggtaggga 444  Q
    ||||||||||||||||||||||||||||||    
T  23405194 tccccgtgagcttagctcagttggtaggga 23405223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 445
Target Start/End: Original strand, 34613978 - 34614007
Alignment:
Q  416 ccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||    
T  34613978 ccccgtgagcttagctcagttggtagggat 34614007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 1844813 - 1844845
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||| |||||||||||||||||||||||    
T  1844813 aatccccgtaagcttagctcagttggtagggat 1844845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 442
Target Start/End: Original strand, 2289607 - 2289635
Alignment:
Q  414 atccccgtgagcttagctcagttggtagg 442  Q
    |||||||||||||||||||||||||||||    
T  2289607 atccccgtgagcttagctcagttggtagg 2289635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 2806571 - 2806543
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  2806571 cccgtgagcttagctcagttggtagggat 2806543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 33233296 - 33233264
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||| ||||||||||||||||    
T  33233296 aatccccgtgagcttatctcagttggtagggat 33233264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 38525627 - 38525595
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||| ||||    
T  38525627 aatccccgtgagcttagctcagttggtaaggat 38525595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 44857308 - 44857276
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||| |||||||||||||||||||||||||||    
T  44857308 aatcctcgtgagcttagctcagttggtagggat 44857276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 338
Target Start/End: Original strand, 17828633 - 17828773
Alignment:
Q  198 caaaaacaccgcaatttaagaatagatattcatttgtctcctgcacaccacacccacctacacacatttgatcctcatactgaattatcccccgacgaaa 297  Q
    |||||| |||| |||||||||||| ||  ||||| ||||| ||||  |||||||||||  |||||||||||| |||||| ||||| ||||||| ||||||    
T  17828633 caaaaaaaccgtaatttaagaataaatgatcattagtctcttgcattccacacccaccagcacacatttgatactcataatgaataatcccccaacgaaa 17828732  T
Q  298 taaattaaccttaataggtagtctattccaaaagagccgcc 338  Q
    |||  || ||| | |||| | |||||| | |||||||||||    
T  17828733 taaggtagcctcagtaggcaatctatttcgaaagagccgcc 17828773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 32706317 - 32706350
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||||    
T  32706317 gaatccccgtgagcttagctcagttggtagggat 32706350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 21749451 - 21749419
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  21749451 aatccccgtgagcttagctcagttggtagggat 21749419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 24124649 - 24124589
Alignment:
Q  209 caatttaagaatagatattcatttgtctcctgcacaccacacccacctacacacatttgat 269  Q
    ||||||||||||| ||   |||| ||||||||||| ||||||||||| |||||||||||||    
T  24124649 caatttaagaataaatgaacattagtctcctgcactccacacccaccaacacacatttgat 24124589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 1743124 - 1743155
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  1743124 atccccgtgagcttagctcagttggtagggat 1743155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 2848210 - 2848241
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  2848210 atccccgtgagcttagctcagttggtagggat 2848241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 4417758 - 4417727
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  4417758 atccccgtgagcttagctcagttggtagggat 4417727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 6518849 - 6518818
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  6518849 atccccgtgagcttagctcagttggtagggat 6518818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 9835030 - 9835061
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  9835030 atccccgtgagcttagctcagttggtagggat 9835061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 11897245 - 11897276
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  11897245 atccccgtgagcttagctcagttggtagggat 11897276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 12463753 - 12463784
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  12463753 atccccgtgagcttagctcagttggtagggat 12463784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 12891554 - 12891585
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  12891554 atccccgtgagcttagctcagttggtagggat 12891585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 13622019 - 13621988
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  13622019 atccccgtgagcttagctcagttggtagggat 13621988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 16603395 - 16603426
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  16603395 atccccgtgagcttagctcagttggtagggat 16603426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 17545245 - 17545214
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  17545245 atccccgtgagcttagctcagttggtagggat 17545214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 21918049 - 21918080
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  21918049 atccccgtgagcttagctcagttggtagggat 21918080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 25648158 - 25648127
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  25648158 atccccgtgagcttagctcagttggtagggat 25648127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 25729513 - 25729482
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  25729513 atccccgtgagcttagctcagttggtagggat 25729482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 27765254 - 27765285
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  27765254 atccccgtgagcttagctcagttggtagggat 27765285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 29713449 - 29713418
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  29713449 atccccgtgagcttagctcagttggtagggat 29713418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 32505685 - 32505716
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  32505685 atccccgtgagcttagctcagttggtagggat 32505716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 41179876 - 41179845
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  41179876 atccccgtgagcttagctcagttggtagggat 41179845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 41477431 - 41477400
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  41477431 atccccgtgagcttagctcagttggtagggat 41477400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 42320314 - 42320345
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  42320314 atccccgtgagcttagctcagttggtagggat 42320345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 42916386 - 42916417
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  42916386 atccccgtgagcttagctcagttggtagggat 42916417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 444
Target Start/End: Original strand, 13956899 - 13956929
Alignment:
Q  414 atccccgtgagcttagctcagttggtaggga 444  Q
    |||||||||||||||||||||||||||||||    
T  13956899 atccccgtgagcttagctcagttggtaggga 13956929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Original strand, 3198325 - 3198354
Alignment:
Q  415 tccccgtgagcttagctcagttggtaggga 444  Q
    ||||||||||||||||||||||||||||||    
T  3198325 tccccgtgagcttagctcagttggtaggga 3198354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Original strand, 4067980 - 4068009
Alignment:
Q  415 tccccgtgagcttagctcagttggtaggga 444  Q
    ||||||||||||||||||||||||||||||    
T  4067980 tccccgtgagcttagctcagttggtaggga 4068009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 445
Target Start/End: Complemental strand, 4745947 - 4745918
Alignment:
Q  416 ccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||    
T  4745947 ccccgtgagcttagctcagttggtagggat 4745918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 18815343 - 18815376
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||| ||||    
T  18815343 gaatccccgtgagcttagctcagttggtaaggat 18815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 445
Target Start/End: Complemental strand, 25472654 - 25472625
Alignment:
Q  416 ccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||    
T  25472654 ccccgtgagcttagctcagttggtagggat 25472625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 2328588 - 2328620
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||| |||||||||||||    
T  2328588 aatccccgtgagcttagcttagttggtagggat 2328620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 5966825 - 5966857
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||| |||||||||||||||||||    
T  5966825 aatccccgtgagcgtagctcagttggtagggat 5966857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 11795503 - 11795535
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||| ||||||||||||||||||||||||||    
T  11795503 aatccctgtgagcttagctcagttggtagggat 11795535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 18993535 - 18993503
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||| |||||||    
T  18993535 aatccccgtgagcttagctcagttgatagggat 18993503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 23292487 - 23292459
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  23292487 cccgtgagcttagctcagttggtagggat 23292459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 24033073 - 24033105
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||| ||||||||||||||||||||||||    
T  24033073 aatccccgcgagcttagctcagttggtagggat 24033105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 35515512 - 35515540
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  35515512 cccgtgagcttagctcagttggtagggat 35515540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 441
Target Start/End: Original strand, 40081874 - 40081902
Alignment:
Q  413 aatccccgtgagcttagctcagttggtag 441  Q
    |||||||||||||||||||||||||||||    
T  40081874 aatccccgtgagcttagctcagttggtag 40081902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 42525396 - 42525428
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||| ||||||||||||||||||||    
T  42525396 aatccccgtgagtttagctcagttggtagggat 42525428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000006; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 11875881 - 11875914
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||||    
T  11875881 gaatccccgtgagcttagctcagttggtagggat 11875914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 11890888 - 11890921
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||||    
T  11890888 gaatccccgtgagcttagctcagttggtagggat 11890921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 16449120 - 16449153
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||||    
T  16449120 gaatccccgtgagcttagctcagttggtagggat 16449153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 10736948 - 10736916
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  10736948 aatccccgtgagcttagctcagttggtagggat 10736916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 26022243 - 26022275
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  26022243 aatccccgtgagcttagctcagttggtagggat 26022275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 28909461 - 28909493
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  28909461 aatccccgtgagcttagctcagttggtagggat 28909493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 34413058 - 34413090
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  34413058 aatccccgtgagcttagctcagttggtagggat 34413090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 12298 - 12267
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  12298 atccccgtgagcttagctcagttggtagggat 12267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 94584 - 94553
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  94584 atccccgtgagcttagctcagttggtagggat 94553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 257536 - 257567
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  257536 atccccgtgagcttagctcagttggtagggat 257567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 658384 - 658353
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  658384 atccccgtgagcttagctcagttggtagggat 658353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 844120 - 844089
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  844120 atccccgtgagcttagctcagttggtagggat 844089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 1937307 - 1937338
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  1937307 atccccgtgagcttagctcagttggtagggat 1937338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 2168520 - 2168489
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  2168520 atccccgtgagcttagctcagttggtagggat 2168489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 6280477 - 6280508
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  6280477 atccccgtgagcttagctcagttggtagggat 6280508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 8265265 - 8265296
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  8265265 atccccgtgagcttagctcagttggtagggat 8265296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 9187296 - 9187265
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  9187296 atccccgtgagcttagctcagttggtagggat 9187265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 17027953 - 17027922
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  17027953 atccccgtgagcttagctcagttggtagggat 17027922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 17558389 - 17558358
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  17558389 atccccgtgagcttagctcagttggtagggat 17558358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 17698519 - 17698550
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  17698519 atccccgtgagcttagctcagttggtagggat 17698550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 29514623 - 29514654
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  29514623 atccccgtgagcttagctcagttggtagggat 29514654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 29716857 - 29716888
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  29716857 atccccgtgagcttagctcagttggtagggat 29716888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 30972890 - 30972859
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  30972890 atccccgtgagcttagctcagttggtagggat 30972859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 32719680 - 32719649
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  32719680 atccccgtgagcttagctcagttggtagggat 32719649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 33604245 - 33604214
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  33604245 atccccgtgagcttagctcagttggtagggat 33604214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 35939484 - 35939515
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  35939484 atccccgtgagcttagctcagttggtagggat 35939515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 38745352 - 38745321
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  38745352 atccccgtgagcttagctcagttggtagggat 38745321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 39362262 - 39362293
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  39362262 atccccgtgagcttagctcagttggtagggat 39362293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 41689879 - 41689910
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  41689879 atccccgtgagcttagctcagttggtagggat 41689910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 43656033 - 43656064
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  43656033 atccccgtgagcttagctcagttggtagggat 43656064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 44340418 - 44340387
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  44340418 atccccgtgagcttagctcagttggtagggat 44340387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 444
Target Start/End: Complemental strand, 14876675 - 14876645
Alignment:
Q  414 atccccgtgagcttagctcagttggtaggga 444  Q
    |||||||||||||||||||||||||||||||    
T  14876675 atccccgtgagcttagctcagttggtaggga 14876645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 415 - 445
Target Start/End: Complemental strand, 23178963 - 23178933
Alignment:
Q  415 tccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||    
T  23178963 tccccgtgagcttagctcagttggtagggat 23178933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Original strand, 481009 - 481038
Alignment:
Q  415 tccccgtgagcttagctcagttggtaggga 444  Q
    ||||||||||||||||||||||||||||||    
T  481009 tccccgtgagcttagctcagttggtaggga 481038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 2792774 - 2792807
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||| |||||||    
T  2792774 gaatccccgtgagcttagctcagttgatagggat 2792807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Complemental strand, 13059249 - 13059220
Alignment:
Q  415 tccccgtgagcttagctcagttggtaggga 444  Q
    ||||||||||||||||||||||||||||||    
T  13059249 tccccgtgagcttagctcagttggtaggga 13059220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 37717358 - 37717391
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||| ||||||||||||||||    
T  37717358 gaatccccgtgagcttaactcagttggtagggat 37717391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 43284041 - 43284008
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||| ||||||||||||||||||||    
T  43284041 gaatccccgtgagtttagctcagttggtagggat 43284008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 2787155 - 2787123
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||| ||||||||||||||||||||||||||||    
T  2787155 aatctccgtgagcttagctcagttggtagggat 2787123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 7797126 - 7797158
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||| |||||||||||||||||||||||    
T  7797126 aatccccgtaagcttagctcagttggtagggat 7797158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 7816399 - 7816431
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||| |||||||||||||||||||||||    
T  7816399 aatccccgtaagcttagctcagttggtagggat 7816431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 20540180 - 20540148
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||| |||||||    
T  20540180 aatccccgtgagcttagctcagttgttagggat 20540148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 26280858 - 26280826
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||| ||||||||||||||||    
T  26280858 aatccccgtgagcttaactcagttggtagggat 26280826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 34158727 - 34158699
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  34158727 cccgtgagcttagctcagttggtagggat 34158699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 34894365 - 34894397
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||| |||||||||||||||||||||||    
T  34894365 aatccccgtaagcttagctcagttggtagggat 34894397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 36540283 - 36540315
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||| ||||||||||||||||    
T  36540283 aatccccgtgagcttaactcagttggtagggat 36540315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 37092087 - 37092119
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||| ||||||||||||||||||||    
T  37092087 aatccccgtgagtttagctcagttggtagggat 37092119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 38955268 - 38955236
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||| ||||||||||||||||    
T  38955268 aatccccgtgagcttaactcagttggtagggat 38955236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 44673718 - 44673690
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  44673718 cccgtgagcttagctcagttggtagggat 44673690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 8965089 - 8965122
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||||    
T  8965089 gaatccccgtgagcttagctcagttggtagggat 8965122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 8433697 - 8433665
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  8433697 aatccccgtgagcttagctcagttggtagggat 8433665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 43147458 - 43147426
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  43147458 aatccccgtgagcttagctcagttggtagggat 43147426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 43207665 - 43207697
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  43207665 aatccccgtgagcttagctcagttggtagggat 43207697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 46105531 - 46105563
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  46105531 aatccccgtgagcttagctcagttggtagggat 46105563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 48798275 - 48798307
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  48798275 aatccccgtgagcttagctcagttggtagggat 48798307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 3764081 - 3764050
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  3764081 atccccgtgagcttagctcagttggtagggat 3764050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 3847678 - 3847709
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  3847678 atccccgtgagcttagctcagttggtagggat 3847709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 6371111 - 6371142
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  6371111 atccccgtgagcttagctcagttggtagggat 6371142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 18360490 - 18360521
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  18360490 atccccgtgagcttagctcagttggtagggat 18360521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 23705226 - 23705195
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  23705226 atccccgtgagcttagctcagttggtagggat 23705195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 24680159 - 24680128
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  24680159 atccccgtgagcttagctcagttggtagggat 24680128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 26868346 - 26868377
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  26868346 atccccgtgagcttagctcagttggtagggat 26868377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 26919541 - 26919510
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  26919541 atccccgtgagcttagctcagttggtagggat 26919510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 35219573 - 35219542
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  35219573 atccccgtgagcttagctcagttggtagggat 35219542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 35465432 - 35465463
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  35465432 atccccgtgagcttagctcagttggtagggat 35465463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 36602439 - 36602408
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  36602439 atccccgtgagcttagctcagttggtagggat 36602408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 37935858 - 37935889
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  37935858 atccccgtgagcttagctcagttggtagggat 37935889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 39023172 - 39023203
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  39023172 atccccgtgagcttagctcagttggtagggat 39023203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 40051619 - 40051650
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  40051619 atccccgtgagcttagctcagttggtagggat 40051650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 43596892 - 43596923
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  43596892 atccccgtgagcttagctcagttggtagggat 43596923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 44602482 - 44602513
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  44602482 atccccgtgagcttagctcagttggtagggat 44602513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 45126129 - 45126160
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  45126129 atccccgtgagcttagctcagttggtagggat 45126160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 45849044 - 45849075
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  45849044 atccccgtgagcttagctcagttggtagggat 45849075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 46775103 - 46775072
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  46775103 atccccgtgagcttagctcagttggtagggat 46775072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 47934145 - 47934114
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  47934145 atccccgtgagcttagctcagttggtagggat 47934114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 48569249 - 48569218
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  48569249 atccccgtgagcttagctcagttggtagggat 48569218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 48949650 - 48949681
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  48949650 atccccgtgagcttagctcagttggtagggat 48949681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 49901479 - 49901510
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  49901479 atccccgtgagcttagctcagttggtagggat 49901510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 55251424 - 55251393
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  55251424 atccccgtgagcttagctcagttggtagggat 55251393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Original strand, 3161019 - 3161048
Alignment:
Q  415 tccccgtgagcttagctcagttggtaggga 444  Q
    ||||||||||||||||||||||||||||||    
T  3161019 tccccgtgagcttagctcagttggtaggga 3161048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Complemental strand, 33933811 - 33933782
Alignment:
Q  415 tccccgtgagcttagctcagttggtaggga 444  Q
    ||||||||||||||||||||||||||||||    
T  33933811 tccccgtgagcttagctcagttggtaggga 33933782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 34353774 - 34353807
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||| ||||||||||||||||||||||||||||    
T  34353774 gaatctccgtgagcttagctcagttggtagggat 34353807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Original strand, 55055914 - 55055943
Alignment:
Q  415 tccccgtgagcttagctcagttggtaggga 444  Q
    ||||||||||||||||||||||||||||||    
T  55055914 tccccgtgagcttagctcagttggtaggga 55055943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 4958630 - 4958598
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||| |||||||||||||||    
T  4958630 aatccccgtgagcttagttcagttggtagggat 4958598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 9761111 - 9761143
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||| ||||||||||||||||    
T  9761111 aatccccgtgagcttacctcagttggtagggat 9761143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 15604110 - 15604082
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  15604110 cccgtgagcttagctcagttggtagggat 15604082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 22230504 - 22230476
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  22230504 cccgtgagcttagctcagttggtagggat 22230476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 22788744 - 22788716
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  22788744 cccgtgagcttagctcagttggtagggat 22788716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 24997504 - 24997476
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  24997504 cccgtgagcttagctcagttggtagggat 24997476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 442
Target Start/End: Complemental strand, 29329896 - 29329868
Alignment:
Q  414 atccccgtgagcttagctcagttggtagg 442  Q
    |||||||||||||||||||||||||||||    
T  29329896 atccccgtgagcttagctcagttggtagg 29329868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 30217595 - 30217627
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||| ||||||||||||||||||||||||||||    
T  30217595 aatctccgtgagcttagctcagttggtagggat 30217627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 40994173 - 40994145
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  40994173 cccgtgagcttagctcagttggtagggat 40994145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 43978008 - 43978036
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  43978008 cccgtgagcttagctcagttggtagggat 43978036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 50442815 - 50442783
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||| ||||||||||||||||||||||||||    
T  50442815 aatccctgtgagcttagctcagttggtagggat 50442783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 414 - 442
Target Start/End: Complemental strand, 52483249 - 52483221
Alignment:
Q  414 atccccgtgagcttagctcagttggtagg 442  Q
    |||||||||||||||||||||||||||||    
T  52483249 atccccgtgagcttagctcagttggtagg 52483221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 55536376 - 55536408
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||| ||||    
T  55536376 aatccccgtgagcttagctcagttggtaaggat 55536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000006; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 42054328 - 42054361
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||||    
T  42054328 gaatccccgtgagcttagctcagttggtagggat 42054361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 1836499 - 1836531
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  1836499 aatccccgtgagcttagctcagttggtagggat 1836531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 10664868 - 10664836
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  10664868 aatccccgtgagcttagctcagttggtagggat 10664836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 17671484 - 17671452
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  17671484 aatccccgtgagcttagctcagttggtagggat 17671452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 21265652 - 21265684
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  21265652 aatccccgtgagcttagctcagttggtagggat 21265684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 32594247 - 32594279
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  32594247 aatccccgtgagcttagctcagttggtagggat 32594279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 33207201 - 33207233
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  33207201 aatccccgtgagcttagctcagttggtagggat 33207233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 51050186 - 51050218
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  51050186 aatccccgtgagcttagctcagttggtagggat 51050218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 1151756 - 1151787
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  1151756 atccccgtgagcttagctcagttggtagggat 1151787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 1570265 - 1570234
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  1570265 atccccgtgagcttagctcagttggtagggat 1570234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 3269616 - 3269647
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  3269616 atccccgtgagcttagctcagttggtagggat 3269647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 4482671 - 4482640
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  4482671 atccccgtgagcttagctcagttggtagggat 4482640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 6438137 - 6438106
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  6438137 atccccgtgagcttagctcagttggtagggat 6438106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 6702573 - 6702604
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  6702573 atccccgtgagcttagctcagttggtagggat 6702604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 6893310 - 6893279
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  6893310 atccccgtgagcttagctcagttggtagggat 6893279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 7166300 - 7166269
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  7166300 atccccgtgagcttagctcagttggtagggat 7166269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 8865851 - 8865882
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  8865851 atccccgtgagcttagctcagttggtagggat 8865882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 15819674 - 15819643
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  15819674 atccccgtgagcttagctcagttggtagggat 15819643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 18216903 - 18216934
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  18216903 atccccgtgagcttagctcagttggtagggat 18216934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 22563383 - 22563414
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  22563383 atccccgtgagcttagctcagttggtagggat 22563414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 25999847 - 25999878
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  25999847 atccccgtgagcttagctcagttggtagggat 25999878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 26584819 - 26584788
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  26584819 atccccgtgagcttagctcagttggtagggat 26584788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 33254725 - 33254756
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  33254725 atccccgtgagcttagctcagttggtagggat 33254756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 33274897 - 33274928
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  33274897 atccccgtgagcttagctcagttggtagggat 33274928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 35605696 - 35605665
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  35605696 atccccgtgagcttagctcagttggtagggat 35605665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 40519617 - 40519586
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  40519617 atccccgtgagcttagctcagttggtagggat 40519586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 42490483 - 42490452
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  42490483 atccccgtgagcttagctcagttggtagggat 42490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 46965737 - 46965768
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  46965737 atccccgtgagcttagctcagttggtagggat 46965768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 48638529 - 48638560
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  48638529 atccccgtgagcttagctcagttggtagggat 48638560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 50899583 - 50899552
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  50899583 atccccgtgagcttagctcagttggtagggat 50899552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 10448709 - 10448651
Alignment:
Q  21 tgttgtttctctccttccagataactcaagaagtcgaaaaccaaatcataaacatgaaa 79  Q
    |||| ||||| |||||||||| ||| |||||||||| |||||||||||  |||||||||    
T  10448709 tgttatttctttccttccagagaacccaagaagtcgcaaaccaaatcaagaacatgaaa 10448651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 444
Target Start/End: Complemental strand, 23933141 - 23933111
Alignment:
Q  414 atccccgtgagcttagctcagttggtaggga 444  Q
    |||||||||||||||||||||||||||||||    
T  23933141 atccccgtgagcttagctcagttggtaggga 23933111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 445
Target Start/End: Original strand, 16343027 - 16343056
Alignment:
Q  416 ccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||    
T  16343027 ccccgtgagcttagctcagttggtagggat 16343056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 16526252 - 16526219
Alignment:
Q  412 gaatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||| |||||||||||    
T  16526252 gaatccccgtgagcttagctcaattggtagggat 16526219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Original strand, 33200036 - 33200065
Alignment:
Q  415 tccccgtgagcttagctcagttggtaggga 444  Q
    ||||||||||||||||||||||||||||||    
T  33200036 tccccgtgagcttagctcagttggtaggga 33200065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 6463110 - 6463078
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||| |||||||||||||||||||||||||    
T  6463110 aatccccatgagcttagctcagttggtagggat 6463078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 9866254 - 9866226
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  9866254 cccgtgagcttagctcagttggtagggat 9866226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Original strand, 24874971 - 24874999
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  24874971 cccgtgagcttagctcagttggtagggat 24874999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 34058210 - 34058242
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||| ||||||||||||||||||||||||||||    
T  34058210 aatctccgtgagcttagctcagttggtagggat 34058242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 416 - 444
Target Start/End: Complemental strand, 36666647 - 36666619
Alignment:
Q  416 ccccgtgagcttagctcagttggtaggga 444  Q
    |||||||||||||||||||||||||||||    
T  36666647 ccccgtgagcttagctcagttggtaggga 36666619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 37662631 - 37662599
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||| |||||||||||||||||||||||||||    
T  37662631 aatcctcgtgagcttagctcagttggtagggat 37662599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 40520826 - 40520858
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||| ||||||||||||||||||||    
T  40520826 aatccccgtgagtttagctcagttggtagggat 40520858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 45333785 - 45333753
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||| ||||||    
T  45333785 aatccccgtgagcttagctcagttggcagggat 45333753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 8817 - 8849
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  8817 aatccccgtgagcttagctcagttggtagggat 8849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 445
Target Start/End: Complemental strand, 10900 - 10868
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||||||    
T  10900 aatccccgtgagcttagctcagttggtagggat 10868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 93 - 62
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  93 atccccgtgagcttagctcagttggtagggat 62  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 8963 - 8994
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  8963 atccccgtgagcttagctcagttggtagggat 8994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 4087 - 4056
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  4087 atccccgtgagcttagctcagttggtagggat 4056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 17617 - 17648
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  17617 atccccgtgagcttagctcagttggtagggat 17648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 46523 - 46554
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  46523 atccccgtgagcttagctcagttggtagggat 46554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 45881 - 45912
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  45881 atccccgtgagcttagctcagttggtagggat 45912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Original strand, 59780 - 59811
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  59780 atccccgtgagcttagctcagttggtagggat 59811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 266770 - 266739
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  266770 atccccgtgagcttagctcagttggtagggat 266739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 445
Target Start/End: Complemental strand, 8898 - 8867
Alignment:
Q  414 atccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||||||||||||||||||||||    
T  8898 atccccgtgagcttagctcagttggtagggat 8867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 444
Target Start/End: Original strand, 9309 - 9338
Alignment:
Q  415 tccccgtgagcttagctcagttggtaggga 444  Q
    ||||||||||||||||||||||||||||||    
T  9309 tccccgtgagcttagctcagttggtaggga 9338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 12455 - 12487
Alignment:
Q  413 aatccccgtgagcttagctcagttggtagggat 445  Q
    ||||||||||||| |||||||||||||||||||    
T  12455 aatccccgtgagcgtagctcagttggtagggat 12487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 930 - 902
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  930 cccgtgagcttagctcagttggtagggat 902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 417 - 445
Target Start/End: Complemental strand, 12331 - 12303
Alignment:
Q  417 cccgtgagcttagctcagttggtagggat 445  Q
    |||||||||||||||||||||||||||||    
T  12331 cccgtgagcttagctcagttggtagggat 12303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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