View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20570_high_54 (Length: 257)
Name: NF20570_high_54
Description: NF20570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20570_high_54 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 15 - 254
Target Start/End: Original strand, 33309551 - 33309792
Alignment:
| Q |
15 |
gataaaaactaaccagctctcacatcccaatttattcctgcactatcttacagttaaaatttcaaatctttatcttgtcttctatttttaaatagtatcc |
114 |
Q |
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| T |
33309551 |
gataaaaactaaccagctctcacatcccaatttattcctgcactatcttacagttaaaatttcaaatctttatcttgtcttctatttttaaatagtatcc |
33309650 |
T |
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| Q |
115 |
aacaattcttagctacatcttttttgactaaaacaattcttaattaatagctgtattacagtattagatccaaattaccaatagctaaactaattgagtc |
214 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33309651 |
aacaattcttagctacttcttttttgactaaaacaattcttaattaatagctgtattacagtattagatccaaattaccaatagctaaactaattgagtc |
33309750 |
T |
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| Q |
215 |
nnnnnnnnt--aaaattacacttattttccacggttaaaatc |
254 |
Q |
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| T |
33309751 |
aaaaaaaataaaaaattacccttattttccacggttaaaatc |
33309792 |
T |
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