View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20570_high_82 (Length: 222)
Name: NF20570_high_82
Description: NF20570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20570_high_82 |
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Alignment Details
Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 26 - 204
Target Start/End: Original strand, 3039811 - 3039992
Alignment:
| Q |
26 |
aaaaacataatgtt-aattttgatagattttatattgtataagtcatttatgatgttatctcggatgtcagggttgtgcaagggcaatactagctaggat |
124 |
Q |
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| T |
3039811 |
aaaaacataatgtttaattttgatagattttatattgtataagtcatttatgatgttatctcggatgccagggttgtgcaagggcgatactagctaggat |
3039910 |
T |
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| Q |
125 |
gctacggggtggtaatggatcttggtctctatcatagga--tggtacccaatttgtagaattctgctattctcccaacacat |
204 |
Q |
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| T |
3039911 |
gctacggggtggtaatggatcttggtctctatcataggatgtggtacccaatttgtagaattatgctattcttccaacacat |
3039992 |
T |
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