View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20570_low_37 (Length: 304)
Name: NF20570_low_37
Description: NF20570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20570_low_37 |
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Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 47 - 296
Target Start/End: Complemental strand, 38039092 - 38038843
Alignment:
| Q |
47 |
gcagtgattatggccctacaaatgttcattcctttacagcgatgtttcaataatcataatgaacttctaaattataatactttgccaactgaactggtat |
146 |
Q |
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| T |
38039092 |
gcagtgattatggccctacaaatgttcattcctttacagcgatgtttcaataatcataatgaacttctaaattataatactttgccaactgaactggtat |
38038993 |
T |
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| Q |
147 |
tcattagcaatcatgcacaggattaagtttagattccacattatcttttgagtaggtagtaataattaatagcacttttgtgttccaggtccaaaagttt |
246 |
Q |
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| T |
38038992 |
tcattagcaatcatgcacaggattaagtttagattccacattatcttttgagtaggtagtaataattaatagcacttttgtgttccaggtccaaaagttt |
38038893 |
T |
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| Q |
247 |
caaaacgaacgttcacgaaagcaaattttttagtaagatataatattctt |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38038892 |
caaaacgaacgttcacgaaagcaaattttttagtaagatataatattctt |
38038843 |
T |
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