View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20570_low_54 (Length: 259)
Name: NF20570_low_54
Description: NF20570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20570_low_54 |
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Alignment Details
Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 45107075 - 45106839
Alignment:
| Q |
1 |
ttttgaactgcaaaggtgttgtggaagtaaacatgtactctaccgcattggatagaaatgtaagtactaaaatctctccccttcatcacacacattttct |
100 |
Q |
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| T |
45107075 |
ttttgaactgcaaaggtgttgtggaagtaaacatgtactctaccgcattggatagaaatgtatgtactaaaatctctccccttcatcacacacattttct |
45106976 |
T |
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| Q |
101 |
agggaaaaaattgaattaaccgtagaaattgagtatgcttttatttttaattttctgttcttgatcaaatatacttttgaatgcaggatatccgtccgaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
45106975 |
agggaaaaaattgaattaaccgtagaaattgagtatgcttttattttaaattttctgttcttgatcaaatatacttatgaatgcaggatatccgtccgaa |
45106876 |
T |
|
| Q |
201 |
aatatattgtgtggttatattcataatcatggtttca |
237 |
Q |
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||||||||||||||||||||||||||||||||||||| |
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| T |
45106875 |
aatatattgtgtggttatattcataatcatggtttca |
45106839 |
T |
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