View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20570_low_58 (Length: 253)
Name: NF20570_low_58
Description: NF20570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20570_low_58 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 14 - 246
Target Start/End: Complemental strand, 30278909 - 30278677
Alignment:
| Q |
14 |
ccatcaatctcaacatgaatccctcattgacctaaacaagtttttcattatcttttttgaaatctacatataaatggacctttgttataggaaaaatgta |
113 |
Q |
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| T |
30278909 |
ccatcaatctcaacatgaatccctcattgacctaaataagtttttccttatcttttttgaaatctacatataaatggacctttgttataggaaaaatgta |
30278810 |
T |
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| Q |
114 |
cgcaactaatatgttaaacctatcacccatctgatccaaaaaatgatttgagtattggtgtttttgcaggtacaagacccctatccgggagaactgccct |
213 |
Q |
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||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30278809 |
cgcaactaatatgttaaacctatcacctatctgattcaaaaattgatttgagtattggtgtttttgcaggtacaagacccctatccgggagaactgccct |
30278710 |
T |
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| Q |
214 |
ggtcctcctccgcgcttaactccaacctttgtt |
246 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
30278709 |
ggtcctcctccgcgcttaactccaacctttgtt |
30278677 |
T |
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